NO12G02840, NO12G02840 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO12G02840 vs. NCBI_GenBank
Match: EWM25757.1 (acidocalcisomal pyrophosphatase [Nannochloropsis gaditana]) HSP 1 Score: 552.4 bits (1422), Expect = 9.800e-154 Identity = 268/315 (85.08%), Postives = 285/315 (90.48%), Query Frame = 0 Query: 1 MKRVASINTINRLTKVQEGEHDTVDYRVHSLDHNEERISLWHELPLFAVDDDARPTGALNFICEIPKFTRRKFEICTTEAGNPIKQDEKNGKPRVFSKGDIFFNYGCFPRTWEDPKHVPEDVGVGGDNDPLDVCEIGLRQIPTGAVRQVKVLGVLCLIDDGEADWKVIAIDEEDRWAGELNDVQDVERLLPGTLHAIREWFRTYKIPDGKPENRFALGERFMGVKYTMRVIRETHEAWKRLIKSSGGMGG--VGEGSNGSLARNLSVPSLEKLNMDSDQQAVFALMGPDGTPRVPGAVG---PLTCLVGEEEGGG 311 MKRVAS+NTINRLTKVQEGEHDTVDYRVHSLDHN+ERISLWHELPLFAVDDDA+PTGALNFICEIPKFTRRKFEICTTEAGNPIKQD+KNGKPRVFSKGDIFFNYGCFPRTWEDP+HVPEDVGVGGDNDPLDVCEIGLRQIPTGAVRQVKVLGVLCLIDDGEADWKVIAIDEEDRWA ELNDVQDVERLLPGTL A+REWFRTYKIPDGKPENRFALGE FMGVKYTMRVIRETHEAWKRL+KSSGG G E S+ SL RNLSVPSLE+L++DSD QAV AL+G + + G++G P GE+ G G Sbjct: 1 MKRVASVNTINRLTKVQEGEHDTVDYRVHSLDHNQERISLWHELPLFAVDDDAKPTGALNFICEIPKFTRRKFEICTTEAGNPIKQDQKNGKPRVFSKGDIFFNYGCFPRTWEDPQHVPEDVGVGGDNDPLDVCEIGLRQIPTGAVRQVKVLGVLCLIDDGEADWKVIAIDEEDRWARELNDVQDVERLLPGTLDAVREWFRTYKIPDGKPENRFALGEEFMGVKYTMRVIRETHEAWKRLVKSSGGWRGDLSREASSQSLHRNLSVPSLEELDIDSDHQAVCALLGEEAASKACGSLGGPPPPGLRGGEDVGRG 315
BLAST of NO12G02840 vs. NCBI_GenBank
Match: CBN78155.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 334.3 bits (856), Expect = 4.200e-88 Identity = 159/280 (56.79%), Postives = 196/280 (70.00%), Query Frame = 0 Query: 4 VASINTINRLTKVQEGEHDTVDYRVH----SLDHNEERISLWHELPLFAVDDDARPTGALNFICEIPKFTRRKFEICTTEAGNPIKQDEKNGKPRVFSKGDIFFNYGCFPRTWEDPKHVPEDVGVGGDNDPLDVCEIGLRQIPTGAVRQVKVLGVLCLIDDGEADWKVIAIDEEDRWAGELNDVQDVERLLPGTLHAIREWFRTYKIPDGKPENRFALGERFMGVKYTMRVIRETHEAWKRLIKSSGGMGGVGEGSNGSLARNLSVPSLEKLNMDSDQQA 280 V + + ++L + GE T+DYR+ H+++ IS+WH++PL+ D+ + TG LNF+CEIP+ +R+KFEI T E GNPIKQD K G R F KGDIFFNYGCFPRTWEDP+HV D GDNDPLDVCEIGLR + TG VRQVKVLGVL +ID+ E DWKVI ID EDRWA ELNDV+DVERLLPG + AIREWFRTYK+PDGKPEN+FAL ER MG Y M+V+ E H AW+ L VG+ G + NLSV L + D + ++ Sbjct: 16 VPAASAEDKLNIFESGEEGTLDYRLRFAMAEHAHSQQVISVWHDIPLYVRDEAEKCTGHLNFVCEIPRCSRKKFEIATNEVGNPIKQDTKKGLLREFKKGDIFFNYGCFPRTWEDPEHVHPDTKFPGDNDPLDVCEIGLRIVATGDVRQVKVLGVLAMIDEDETDWKVIVIDREDRWAPELNDVEDVERLLPGVVPAIREWFRTYKVPDGKPENKFALDERCMGRSYAMKVVSECHLAWRNL---------VGKAELGEVKSNLSVSRLSDMGSDIELES 286
BLAST of NO12G02840 vs. NCBI_GenBank
Match: XP_009034593.1 (hypothetical protein AURANDRAFT_21835 [Aureococcus anophagefferens] >EGB11034.1 hypothetical protein AURANDRAFT_21835 [Aureococcus anophagefferens]) HSP 1 Score: 322.8 bits (826), Expect = 1.300e-84 Identity = 157/252 (62.30%), Postives = 179/252 (71.03%), Query Frame = 0 Query: 2 KRVASINTINRLTKVQEGEHDTVDYRVHSL--DHNEER----ISLWHELPLFAVDDDARPTGALNFICEIPKFTRRKFEICTTEAGNPIKQDEKNGKPRVFSKGDIFFNYGCFPRTWEDPKHVPEDVGVGGDNDPLDVCEIGLRQIPTGAVRQVKVLGVLCLIDDGEADWKVIAIDEEDRWAGELNDVQDVERLLPGTLHAIREWFRTYKIPDGKPENRFALGERFMGVKYTMRVIRETHEAWKRLIKSSGG 248 K+ A I L ++ G+ T DYRVH L D +E + +SLWH++PL A R + NFICEIPK TR+KFE+ TTE PIKQD K G R F KGDIFFNYGCFPRTWEDP+HV D G GDNDPLDVCEIGLRQI TG +R VKVLGVL +IDD E DWK++AID DRWA ELNDV DVERLLPGT+ IREWFRTYKIPDGKP N+FALGE G Y +VI ETHEAW L+K+ G Sbjct: 51 KQAARCRAIETLI-MERGQAGTKDYRVHVLAKDGDEAKTVAELSLWHDVPLAAPGSSGRGS-LFNFICEIPKCTRKKFEVATTEGATPIKQDTKKGVLREFKKGDIFFNYGCFPRTWEDPRHVSPDTGYPGDNDPLDVCEIGLRQIQTGEIRAVKVLGVLAMIDDDETDWKIVAIDAADRWASELNDVGDVERLLPGTVSLIREWFRTYKIPDGKPPNKFALGEECKGAAYAHKVIHETHEAWVNLVKTQVG 300
BLAST of NO12G02840 vs. NCBI_GenBank
Match: XP_009039444.1 (hypothetical protein AURANDRAFT_72128 [Aureococcus anophagefferens] >EGB05902.1 hypothetical protein AURANDRAFT_72128 [Aureococcus anophagefferens]) HSP 1 Score: 317.0 bits (811), Expect = 6.900e-83 Identity = 152/254 (59.84%), Postives = 180/254 (70.87%), Query Frame = 0 Query: 5 ASINTINRLTKVQEGEHDTVDYRVHSLD--------HNEERISLWHELPLFAVD---DDARPTGALNFICEIPKFTRRKFEICTTEAGNPIKQDEKNGKPRVFSKGDIFFNYGCFPRTWEDPKHVPEDVGVGGDNDPLDVCEIGLRQIPTGAVRQVKVLGVLCLIDDGEADWKVIAIDEEDRWAGELNDVQDVERLLPGTLHAIREWFRTYKIPDGKPENRFALGERFMGVKYTMRVIRETHEAWKRLIKSSGG 248 A ++ +N L ++ G +T DYRVH LD + + +SLWH++PL A D + + PT NF+CEIPK TR+KFE+ T E PIKQD K G R F KGDIFFNYGCFPRTWEDP+H D G GDNDPLDVCEIGLRQ+ TG +R VKVLGVL +IDD E DWKV+AID EDRWA ELNDV DVERLLPGT+ IREWFRTYKIPDGKP N+FA ER + Y ++VI ETHE++ LIK G Sbjct: 55 ARLDELNTLV-LERGSANTTDYRVHVLDAPRAAGRSGSTKELSLWHDVPLVAADGAPESSTPT--FNFVCEIPKCTRKKFEVATNEHVTPIKQDTKKGVLREFKKGDIFFNYGCFPRTWEDPRHTSPDTGYPGDNDPLDVCEIGLRQVRTGEIRAVKVLGVLAMIDDDETDWKVVAIDAEDRWASELNDVDDVERLLPGTVGLIREWFRTYKIPDGKPPNKFAFEERCLPAAYALKVIHETHESYLELIKEGKG 305
BLAST of NO12G02840 vs. NCBI_GenBank
Match: XP_002177756.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC50570.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 310.1 bits (793), Expect = 8.500e-81 Identity = 152/282 (53.90%), Postives = 192/282 (68.09%), Query Frame = 0 Query: 2 KRVASINTINRLTKVQEGEHDTVDYRVHSLD-HNEERISLWHELPLFAVDDDAR-PTGALNFICEIPKFTRRKFEICTTEAGNPIKQDEKNGKPRVFSKGDIFFNYGCFPRTWEDPKHV-PEDVGVGGDNDPLDVCEIGLRQIPTGAVRQVKVLGVLCLIDDGEADWKVIAIDEEDRWAGELNDVQDVERLLPGTLHAIREWFRTYKIPDGKPENRFALGERFMGVKYTMRVIRETHEAWKRLIKSSGGMGGVGEGSN-GSLARNLSVPSLEKLNMDSDQQA 280 KR AS ++ N + +G DT++YR+ ++D ++ISLWH++ L +D + R T LNF+CEIPKFTR+K+EI T E GNPIKQDEK G R F KGDIFFNYGCFP+TWEDP + P+ G GDNDPLDVCEIG R + G VR VKVLGVLC+ID+GE DWKV+ +D +D+WA LND+ DVE LPG L AIREW+RTYKIPDGKP N F L E+FMG Y + +I+E H +W+ L+ G L RNLS SL L ++ D+ A Sbjct: 16 KRTASASS-NEIELEADGMEDTLEYRLQAVDASGSKKISLWHDVSLIHLDQETREETQYLNFVCEIPKFTRKKYEIATDEPGNPIKQDEKKGTLREFKKGDIFFNYGCFPQTWEDPTFIHPDAEGCRGDNDPLDVCEIGARIVRPGGVRPVKVLGVLCMIDEGECDWKVVVVDADDKWAPFLNDINDVEEQLPGLLDAIREWYRTYKIPDGKPPNVFGLDEKFMGKAYALEIIQECHHSWEELLAGEKERLLEDHGDEVKDLVRNLSRNSLFTLGLNLDEHA 296
BLAST of NO12G02840 vs. NCBI_GenBank
Match: XP_002290146.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED91898.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 309.3 bits (791), Expect = 1.400e-80 Identity = 154/282 (54.61%), Postives = 193/282 (68.44%), Query Frame = 0 Query: 3 RVASINTINRLTKVQEGEHDTVDYRVHSLDH--NEERISLWHELPLFAVDDDA-RPTGALNFICEIPKFTRRKFEICTTEAGNPIKQDEKNGKPRVFSKGDIFFNYGCFPRTWEDPKHV-PEDVGVGGDNDPLDVCEIGLRQIPTGAVRQVKVLGVLCLIDDGEADWKVIAIDEEDRWAGELNDVQDVERLLPGTLHAIREWFRTYKIPDGKPENRFALGERFMGVKYTMRVIRETHEAWKRLIKSSGGMGGVG-EGSNGSLARNLSVPSLEKLNMDSDQQA 280 R +S + + L + G+ +T +YR+ ++D + + ISLWH++ L VD RPT LNF+CEIPKF+R+KFEI T E GN IKQDEK G R F KGDIFFNYGC PRTWEDP ++ P+ G GDNDP+DVCEIG R + TG +R VKVLG+LC+ID+GEADWKV+ ID ED+WA LNDV DVE+ LPGTL AIREWFRTYKIPDGKP N F L E+FM Y + +I+E + AWK LI G + + +L R LS +L L D D +A Sbjct: 22 RSSSHGSNSNLDLLSHGDENTTEYRIKAVDKAGSSKPISLWHDVTLVHVDPATDRPTPYLNFVCEIPKFSRKKFEIATDEVGNFIKQDEKKGVLREFKKGDIFFNYGCLPRTWEDPTYIHPDAEGCRGDNDPVDVCEIGARIVKTGEIRPVKVLGILCMIDEGEADWKVVTIDAEDKWAPFLNDVDDVEKHLPGTLSAIREWFRTYKIPDGKPPNVFGLDEKFMDKHYALEIIKECNHAWKDLITGEKERGMEHCDDTVKTLVRKLSKSNLVDLAHDDDDEA 303
BLAST of NO12G02840 vs. NCBI_GenBank
Match: EJK53091.1 (hypothetical protein THAOC_27535 [Thalassiosira oceanica]) HSP 1 Score: 305.8 bits (782), Expect = 1.600e-79 Identity = 153/265 (57.74%), Postives = 181/265 (68.30%), Query Frame = 0 Query: 19 GEHDTVDYRVHSLDHNEER-ISLWHELPLFAVDDDA-RPTGALNFICEIPKFTRRKFEICTTEAGNPIKQDEKNGKPRVFSKGDIFFNYGCFPRTWEDPKHV-PEDVGVGGDNDPLDVCEIGLRQIPTGAVRQVKVLGVLCLIDDGEADWKVIAIDEEDRWAGELNDVQDVERLLPGTLHAIREWFRTYKIPDGKPENRFALGERFMGVKYTMRVIRETHEAWKRLIKSSGGMG-GVGEGSNGSLARNLSVPSLEKLNMDSDQQA 280 G+ T ++R+ + D + + ISLWH++ L VD RPT LNF+CEIPKFTR+KFEI T E GN IKQDEK G R F KGDIFFNYGC PRTWEDP V P+ G GDNDP+DVCEIG R I TG +R VKVLG+LC+ID+GEADWKV+ ID ED+WA LNDV DVE+LLPGTL AIREWFRTYKIPDGKP N F L E+FM Y + +I+E + AWK LI + L R LS +L L+ D D A Sbjct: 36 GDEQTTEFRIKASDKSGSKPISLWHDVTLVHVDPATDRPTPYLNFVCEIPKFTRKKFEIATDEVGNFIKQDEKKGVLREFKKGDIFFNYGCLPRTWEDPTFVHPDAEGCRGDNDPVDVCEIGSRIIGTGDIRPVKVLGILCMIDEGEADWKVVTIDAEDKWAPFLNDVDDVEKLLPGTLSAIREWFRTYKIPDGKPPNVFGLDEKFMDKHYALEIIKECNHAWKELITGEKERNLEKCDAEVRGLVRKLSKSNLLDLDADDDDNA 300
BLAST of NO12G02840 vs. NCBI_GenBank
Match: OEU12349.1 (inorganic pyrophosphatase [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 297.4 bits (760), Expect = 5.700e-77 Identity = 153/286 (53.50%), Postives = 186/286 (65.03%), Query Frame = 0 Query: 2 KRVASINTINRLTKVQEGEHDTVDYRVHSL-----DHNEERISLWHELPLFAVDDDA-RPTGALNFICEIPKFTRRKFEICTTEAGNPIKQDEKNGKPRVFSKGDIFFNYGCFPRTWEDPKHV-PEDVGVGGDNDPLDVCEIGLRQIPTGAVRQVKVLGVLCLIDDGEADWKVIAIDEEDRWAGELNDVQDVERLLPGTLHAIREWFRTYKIPDGKPENRFALGERFMGVKYTMRVIRETHEAWKRLI---KSSGGMGGVGEGSNGSLARNLSVPSLEKLNMDSDQ 278 KR S + + +EGE +T++YRVH+ DH + ISLWH++ L +D T LNF+CEIPKFTR+K+EI T E PIKQD K G R F KGDIFFNYGCFP+TWEDP V P+ G GDNDP+DVCEIG R G VR VKVLGVL +ID+GEADWK+I ID++D+WA +ND++DVE LPG L AIREW+RTYKIPDGKP N F L ERFM Y M VI E + AWK L+ K +GE G L R LS SL + + D+ Sbjct: 4 KRSDSFGSDKDINLHEEGEENTLEYRVHAKHGGDGDHKGKTISLWHDVSLVHIDPATNEKTDCLNFVCEIPKFTRKKYEIATDEDFTPIKQDTKKGVLREFKKGDIFFNYGCFPQTWEDPTFVHPDADGCRGDNDPVDVCEIGARICGVGGVRPVKVLGVLMMIDEGEADWKIITIDKDDKWAPFMNDIEDVEEQLPGLLDAIREWYRTYKIPDGKPPNTFGLDERFMNKAYAMTVIDECNHAWKDLVSGEKERNMSADLGEEVKG-LVRKLSKNSLSLMAPNLDE 288
BLAST of NO12G02840 vs. NCBI_GenBank
Match: GAX20176.1 (inorganic pyrophosphatase [Fistulifera solaris]) HSP 1 Score: 297.4 bits (760), Expect = 5.700e-77 Identity = 144/245 (58.78%), Postives = 175/245 (71.43%), Query Frame = 0 Query: 1 MKRVASINTINRLTKVQEGEHDTVDYRVHSL-DHNEERISLWHELPLFAVDDDAR-PTGALNFICEIPKFTRRKFEICTTEAGNPIKQDEKNGKPRVFSKGDIFFNYGCFPRTWEDPKHV-PEDVGVGGDNDPLDVCEIGLRQIPTGAVRQVKVLGVLCLIDDGEADWKVIAIDEEDRWAGELNDVQDVERLLPGTLHAIREWFRTYKIPDGKPENRFALGERFMGVKYTMRVIRETHEAWKRLI 243 +KR S + L GE DT+DYR+ ++ +++ISLWH++ L+ +D + T LNF+CEIPKFTR+KFEI T E GNPIKQD K G+ R F KGDIFFNYGCFP+TWEDP + P+ G GDNDPLDVCEIG R I G VR VKVLGVL +ID+GE DWKV+ ID ED+WA LND++DVER LPG L AIREW+RTYKIPDGKP N F L E+FM +Y VI E H AW+ L+ Sbjct: 18 LKRNNSRGPGSELELSHHGEADTLDYRLQAVCPEKKKKISLWHDISLYHMDPVTKAETPYLNFVCEIPKFTRKKFEIATDEEGNPIKQDTKKGQLREFKKGDIFFNYGCFPQTWEDPTFIHPDADGCRGDNDPLDVCEIGARIIQPGDVRAVKVLGVLLMIDEGECDWKVVVIDIEDKWAPFLNDIEDVERELPGQLDAIREWYRTYKIPDGKPPNVFGLDEKFMNKEYAKGVIDECHHAWELLM 262
BLAST of NO12G02840 vs. NCBI_GenBank
Match: GAX25481.1 (inorganic pyrophosphatase [Fistulifera solaris]) HSP 1 Score: 297.0 bits (759), Expect = 7.400e-77 Identity = 143/245 (58.37%), Postives = 175/245 (71.43%), Query Frame = 0 Query: 1 MKRVASINTINRLTKVQEGEHDTVDYRVHSL-DHNEERISLWHELPLFAVDDDAR-PTGALNFICEIPKFTRRKFEICTTEAGNPIKQDEKNGKPRVFSKGDIFFNYGCFPRTWEDPKHV-PEDVGVGGDNDPLDVCEIGLRQIPTGAVRQVKVLGVLCLIDDGEADWKVIAIDEEDRWAGELNDVQDVERLLPGTLHAIREWFRTYKIPDGKPENRFALGERFMGVKYTMRVIRETHEAWKRLI 243 +KR S + L GE DT+DYR+ ++ +++ISLWH++ L+ +D + T LNF+CEIPKFTR+KFEI T E GNPIKQD K G+ R F KGDIFFNYGCFP+TWEDP + P+ G GDNDPLDVCEIG R I G VR VKVLG+L +ID+GE DWKV+ ID ED+WA LND++DVER LPG L AIREW+RTYKIPDGKP N F L E+FM +Y VI E H AW+ L+ Sbjct: 18 LKRNNSRGPGSELELSHHGEADTLDYRLQAVCPEKKKKISLWHDISLYHMDPVTKAETPYLNFVCEIPKFTRKKFEIATDEEGNPIKQDTKKGQLREFKKGDIFFNYGCFPQTWEDPTFIHPDADGCRGDNDPLDVCEIGARIIQPGDVRAVKVLGILLMIDEGECDWKVVVIDIEDKWAPFLNDIEDVERELPGQLDAIREWYRTYKIPDGKPPNVFGLDEKFMNKEYAKGVIDECHHAWELLM 262 The following BLAST results are available for this feature:
BLAST of NO12G02840 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO12G02840 ID=NO12G02840|Name=NO12G02840|organism=Nannochloropsis oceanica|type=gene|length=2505bpback to top protein sequence of NO12G02840.1 >NO12G02840.1-protein ID=NO12G02840.1-protein|Name=NO12G02840.1|organism=Nannochloropsis oceanica|type=polypeptide|length=333bpback to top Synonyms
Publications
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