NO12G02830, NO12G02830 (gene) Nannochloropsis oceanica

Overview
NameNO12G02830
Unique NameNO12G02830
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2225
Alignment locationchr12:788700..790924 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr12genomechr12:788700..790924 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR014982GSCFA
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Homology
BLAST of NO12G02830 vs. NCBI_GenBank
Match: SCG99164.1 (GSCFA family [uncultured Bacteroides sp.])

HSP 1 Score: 220.7 bits (561), Expect = 9.200e-54
Identity = 132/349 (37.82%), Postives = 196/349 (56.16%), Query Frame = 0
Query:   95 PRVSHRRVYPADPILFLGSCFSDNMGGKLKENLKMNVEINPFGTAYNPVSIYRCLERLATGRPFEEEELEEHPQDGRWFSFDHHTSFSARDPSKVLSNINSRLAQGHVSLKHAKHVFLTLGTAHAYVLLSKERKGREKGEKRVVANCHRLPATSFRRELLDIPKIVSSLQSAIQSIRVINTECTITFTVSPVRHLRNAAGDAIQSSR-SKAQLLAAI---HQVLDEDLLSXXXXXXXXXXXXXXXXXXXXXXAYEIMMDDLRDYRFYAPDMIHPSPVALEYIYSRFADAYLDFSPPSFLLRKDLETLRRNLQHRPLDRTSPAHQLFLKQQLIKMEGLQASWPHLDFEAE 440
            P +SH       PIL +GSCF++NMG  L E  K  +++NPFG  YNP+SI   L+ + T + + E++L  +   G W S  HH SFSA  P   L NIN+RL Q H ++     + LT GTA+ Y       + +E G  +VV+NCH+LP   F R LL + +IV    S I  +   N      FTVSP+RH+R    D + +++ SK+ LL AI    Q+  E +                        +YEI++D+LRDYRFYA DM+HPSP+A+ Y++ RF++ +  FS  +  + +++E +RR+L H+P    S A+Q FL Q ++K+E L   +P+LDF+ E
Sbjct:   15 PSISH-----ISPILLMGSCFAENMGTFLTE-AKFQLDLNPFGILYNPLSISSALKEIITKKEYTEKDLFAY--RGLWHSTMHHGSFSATTPEATLQNINARLLQAHQTVPKLDWLMLTFGTAYVY-------EAKETG--KVVSNCHKLPENDFNRRLLSVDEIVDEYTSLITDMAACNATLKFLFTVSPIRHIR----DGMHANQLSKSTLLLAIDRLQQLFPEQVF--------------------YFPSYEIVLDELRDYRFYADDMLHPSPLAVRYLWERFSETF--FSAETKQVIREVEDIRRDLAHKPFHPESEAYQRFLGQIVLKIERLIRKYPYLDFQKE 320          
BLAST of NO12G02830 vs. NCBI_GenBank
Match: WP_072066241.1 (GSCFA domain protein [Bacteroides thetaiotaomicron])

HSP 1 Score: 220.7 bits (561), Expect = 9.200e-54
Identity = 129/346 (37.28%), Postives = 199/346 (57.51%), Query Frame = 0
Query:   95 PRVSHRRVYPADPILFLGSCFSDNMGGKLKENLKMNVEINPFGTAYNPVSIYRCLERLATGRPFEEEELEEHPQDGRWFSFDHHTSFSARDPSKVLSNINSRLAQGHVSLKHAKHVFLTLGTAHAYVLLSKERKGREKGEKRVVANCHRLPATSFRRELLDIPKIVSSLQSAIQSIRVINTECTITFTVSPVRHLRNAAGDAIQSSR-SKAQLLAAIHQVLDEDLLSXXXXXXXXXXXXXXXXXXXXXXAYEIMMDDLRDYRFYAPDMIHPSPVALEYIYSRFADAYLDFSPPSFLLRKDLETLRRNLQHRPLDRTSPAHQLFLKQQLIKMEGLQASWPHLDFEAE 440
            P VSH     A+ IL +GSCF++NMG  L EN K  V++NPFG  YNP+S+   L  +  G+ ++E++L  + +   W S  HH  FSA  P KVL  IN+RL+Q H S+     + LT GTA+ Y          +K  ++VV+NCH+LP + F R +L + +IV+   S I S+   N+   + FTVSP+RH+R    D + +++ SK+ LL AI ++                             +YEI++D+LRDYR+YA DM+HPSP+A+ Y++ RF++A+  FS  +  +   +E + ++L H+P    S A+Q FL Q ++K+E L   +P+LDF+ E
Sbjct:   14 PPVSH-----AERILLMGSCFAENMGRLLAEN-KFRVDMNPFGILYNPLSVSTALVEILKGKVYQEKDLFLYKE--CWHSPMHHGLFSASSPEKVLEKINTRLSQAHRSVHELDWLMLTFGTAYVY---------EQKETRQVVSNCHKLPESCFNRRILSVDEIVNEYTSLITSMVARNSHLKVLFTVSPIRHIR----DGMHANQLSKSTLLLAIDRL-----------------QQLFPDHVFYFPSYEIVLDELRDYRYYADDMLHPSPLAVRYLWERFSEAF--FSAETKQVITAIEDITKDLSHKPFHPESEAYQRFLGQIVLKIERLNGKYPYLDFQKE 319          
BLAST of NO12G02830 vs. NCBI_GenBank
Match: WP_022300740.1 (lipoprotein [Bacteroides sp. HMSC067B03] >CDC89945.1 putative lipoprotein [Bacteroides faecis CAG:32] >OFK94095.1 GSCFA domain protein [Bacteroides sp. HMSC067B03])

HSP 1 Score: 220.3 bits (560), Expect = 1.200e-53
Identity = 129/348 (37.07%), Postives = 199/348 (57.18%), Query Frame = 0
Query:   94 TPRVSHRRVYPADPILFLGSCFSDNMGGKLKENLKMNVEINPFGTAYNPVSIYRCLERLATGRPFEEEELEEHPQDGRWFSFDHHTSFSARDPSKVLSNINSRLAQGHVSLKHAKHVFLTLGTAHAYVLLSKERKGREKGEKRVVANCHRLPATSFRRELLDIPKIVSSLQSAIQSIRVINTECTITFTVSPVRHLRNAAGDAIQSSR-SKAQLLAAIHQVLDEDLLSXXXXXXXXXXXXXXXXXXXXXXAYEIMMDDLRDYRFYAPDMIHPSPVALEYIYSRFADAYLDFSPPSFLLRKDLETLRRNLQHRPLDRTSPAHQLFLKQQLIKMEGLQASWPHLDFEAER 441
            +P +SH     ++ IL +GSCF++N+G  L EN K  V++NPFG  YNP+S+   L  +  G+ ++E++L  + +   W S  HH SFSA  P  VL  IN+RL+Q H S+     + LT GTA+ Y          +K  ++VV+NCH+LP + F R +L + +IV+   S I SI   N+   I FTVSP+RH+R    D + +++ SK+ LL AI ++                             +YEI++D+LRDYRFYA DM+HPSP+ + Y++ RF++ +  FS  +  L   +E + R+L H+P    S A+Q FL Q ++K+E L   +P+LDF+ E+
Sbjct:   13 SPLISH-----SERILLMGSCFAENIGSLLAEN-KFRVDMNPFGILYNPLSVSAALVEILKGKVYQEKDLFLYKE--CWHSPMHHGSFSASSPEGVLQKINTRLSQAHRSVHELDWLMLTFGTAYVY---------EQKETRQVVSNCHKLPESHFNRRILSVDEIVNEYTSLITSIVARNSGLKILFTVSPIRHIR----DGMHANQLSKSTLLLAIDRLQQR-----------------FPEHVFYFPSYEIVLDELRDYRFYADDMLHPSPMTVRYLWERFSETF--FSAETKQLITAVEDISRDLSHKPFHPESEAYQRFLGQIVLKIERLNGKYPYLDFQKEK 320          
BLAST of NO12G02830 vs. NCBI_GenBank
Match: WP_066632321.1 (hypothetical protein [Labilibacter marinus])

HSP 1 Score: 220.3 bits (560), Expect = 1.200e-53
Identity = 127/362 (35.08%), Postives = 197/362 (54.42%), Query Frame = 0
Query:   87 FRTIIPVTPRVSHRRVYPADPILFLGSCFSDNMGGKLKENLKMNVEINPFGTAYNPVSIYRCLERLATGRPFEEEELEEHPQDGRWFSFDHHTSFSARDPSKVLSNINSRLAQGHVSLKHAKHVFLTLGTAHAYVLLSKERKGREKGEKRVVANCHRLPATSFRRELLDIPKIVSSLQSAIQSIRVINTECTITFTVSPVRHLRNAAGDAIQSSRSKAQLLAAIHQVLDEDLLSXXXXXXXXXXXXXXXXXXXXXXAYEIMMDDLRDYRFYAPDMIHPSPVALEYIYSRFADAYLDFSPPSFLLRKDLETLRRNLQHRPLDRTSPAHQLFLKQQLIKMEGLQASWPHLDFEAERAVVRKGLV 449
            FRT I +    S+ ++   DP LF+GSCF+DN+GGK  +  ++   INPFG  YNP+S+   L  +   + + E +L  H  +  W SF+HH SFS  +  + L  IN+     H+ LK +K++F+T GTA  Y L             ++V+NCH+  A  F R +L++ +IV   +SA+  + V N E  I FTVSPVRH ++ A     +  SKA LL AI ++ +                           AYEI+MDDLRDYRFY+ DMIHP+  A++Y++S+F + +  FS  +   +K++  L + L H+P +  + +HQ FLK Q  K++ L   +P +DF  + A +   ++
Sbjct:    4 FRTEIHIED--SNNKIEYNDPTLFIGSCFADNIGGKFTQ-CRLPSMINPFGVMYNPISVANTLSSIIHKKEYTESDLRFH--NDLWLSFEHHGSFSDPNKEQCLQKINTSCNNAHIQLKKSKYLFITFGTAWVYQL---------NETSQIVSNCHKYAAKLFNRYMLNMDEIVDLYKSALIELLVFNPEVKIVFTVSPVRHWKDGAHG---NMLSKATLLMAIDKICE------------------MFESCSYFPAYEILMDDLRDYRFYSSDMIHPNSTAIDYVWSKFENCF--FSTRTLEYKKEMTNLEKALNHKPFNSKTESHQKFLKNQYEKLKHLINKYPEIDFSKDLAFLSTEII 328          
BLAST of NO12G02830 vs. NCBI_GenBank
Match: OKZ24996.1 (GSCFA domain protein [Bacteroides finegoldii])

HSP 1 Score: 220.3 bits (560), Expect = 1.200e-53
Identity = 132/349 (37.82%), Postives = 196/349 (56.16%), Query Frame = 0
Query:   95 PRVSHRRVYPADPILFLGSCFSDNMGGKLKENLKMNVEINPFGTAYNPVSIYRCLERLATGRPFEEEELEEHPQDGRWFSFDHHTSFSARDPSKVLSNINSRLAQGHVSLKHAKHVFLTLGTAHAYVLLSKERKGREKGEKRVVANCHRLPATSFRRELLDIPKIVSSLQSAIQSIRVINTECTITFTVSPVRHLRNAAGDAIQSSR-SKAQLLAAI---HQVLDEDLLSXXXXXXXXXXXXXXXXXXXXXXAYEIMMDDLRDYRFYAPDMIHPSPVALEYIYSRFADAYLDFSPPSFLLRKDLETLRRNLQHRPLDRTSPAHQLFLKQQLIKMEGLQASWPHLDFEAE 440
            P +SH       PIL +GSCF++NMG  L E  K  +++NPFG  YNP+SI   L+ + T + + E++L  +   G W S  HH SFSA  P   L NIN+RL Q H ++     + LT GTA+ Y       + +E G  +VV+NCH+LP   F R LL + +IV    S I  +   N      FTVSP+RH+R    D + +++ SK+ LL AI    Q+  E +                        +YEI++D+LRDYRFYA DM+HPSP+A+ Y++ RF++ +  FS  +  + +++E +RR+L H+P    S A+Q FL Q ++K+E L   +P+LDF+ E
Sbjct:   14 PSISH-----ISPILLMGSCFAENMGTFLTE-AKFQLDLNPFGILYNPLSISSALKEIITKKEYTEKDLFAY--RGLWHSTMHHGSFSATTPEATLQNINARLLQAHQTVLKLDWLMLTFGTAYVY-------EAKETG--KVVSNCHKLPENDFNRRLLSVDEIVDEYTSLITDMAACNATLKFLFTVSPIRHIR----DGMHANQLSKSTLLLAIDRLQQLFPEQVF--------------------YFPSYEIVLDELRDYRFYADDMLHPSPLAVRYLWERFSETF--FSAETKQVIREVEDIRRDLAHKPFHPESEAYQRFLGQIVLKIERLIRKYPYLDFQKE 319          
BLAST of NO12G02830 vs. NCBI_GenBank
Match: WP_008764326.1 (MULTISPECIES: hypothetical protein [Bacteroides] >NP_813011.1 hypothetical protein BT_4100 [Bacteroides thetaiotaomicron VPI-5482] >AAO79205.1 putative lipoprotein [Bacteroides thetaiotaomicron VPI-5482] >EES68584.1 hypothetical protein BSIG_2545 [Bacteroides sp. 1_1_6] >EOR97959.1 hypothetical protein C799_04172 [Bacteroides thetaiotaomicron dnLKV9] >CUN07405.1 GSCFA family [Bacteroides thetaiotaomicron] >CUP03242.1 GSCFA family [Bacteroides thetaiotaomicron] >ALJ43652.1 GSCFA family protein [Bacteroides thetaiotaomicron] >KXT30280.1 GSCFA family protein [Bacteroides thetaiotaomicron] >SEF43238.1 GSCFA family protein [Bacteroides thetaiotaomicron] >SEK77459.1 GSCFA family protein [Bacteroides thetaiotaomicron] >PLS58489.1 GSCFA domain protein [Bacteroides thetaiotaomicron] >PQL38264.1 GSCFA domain protein [Bacteroides thetaiotaomicron])

HSP 1 Score: 219.2 bits (557), Expect = 2.700e-53
Identity = 128/346 (36.99%), Postives = 199/346 (57.51%), Query Frame = 0
Query:   95 PRVSHRRVYPADPILFLGSCFSDNMGGKLKENLKMNVEINPFGTAYNPVSIYRCLERLATGRPFEEEELEEHPQDGRWFSFDHHTSFSARDPSKVLSNINSRLAQGHVSLKHAKHVFLTLGTAHAYVLLSKERKGREKGEKRVVANCHRLPATSFRRELLDIPKIVSSLQSAIQSIRVINTECTITFTVSPVRHLRNAAGDAIQSSR-SKAQLLAAIHQVLDEDLLSXXXXXXXXXXXXXXXXXXXXXXAYEIMMDDLRDYRFYAPDMIHPSPVALEYIYSRFADAYLDFSPPSFLLRKDLETLRRNLQHRPLDRTSPAHQLFLKQQLIKMEGLQASWPHLDFEAE 440
            P VSH     A+ IL +GSCF++NMG  L EN K  V++NPFG  YNP+S+   L  +  G+ ++E++L  + +   W S  HH  FSA  P +VL  IN+RL+Q H S+     + LT GTA+ Y          +K  ++VV+NCH+LP + F R +L + +IV+   S I S+   N+   + FTVSP+RH+R    D + +++ SK+ LL AI ++                             +YEI++D+LRDYR+YA DM+HPSP+A+ Y++ RF++A+  FS  +  +   +E + ++L H+P    S A+Q FL Q ++K+E L   +P+LDF+ E
Sbjct:   14 PPVSH-----AERILLMGSCFAENMGRLLAEN-KFRVDMNPFGILYNPLSVSTALVEILKGKVYQEKDLFLYKE--CWHSPMHHGLFSASSPEEVLEKINTRLSQAHRSVHELDWLMLTFGTAYVY---------EQKETRQVVSNCHKLPESCFNRRILSVDEIVNEYTSLITSMVARNSHLKVLFTVSPIRHIR----DGMHANQLSKSTLLLAIDRL-----------------QQLFPDHVFYFPSYEIVLDELRDYRYYADDMLHPSPLAVRYLWERFSEAF--FSAETKQVITAIEDITKDLSHKPFHPESEAYQRFLGQIVLKIERLNGKYPYLDFQKE 319          
BLAST of NO12G02830 vs. NCBI_GenBank
Match: WP_055216636.1 (GSCFA domain protein [Bacteroides thetaiotaomicron] >CUP33521.1 GSCFA family [Bacteroides thetaiotaomicron])

HSP 1 Score: 219.2 bits (557), Expect = 2.700e-53
Identity = 129/346 (37.28%), Postives = 198/346 (57.23%), Query Frame = 0
Query:   95 PRVSHRRVYPADPILFLGSCFSDNMGGKLKENLKMNVEINPFGTAYNPVSIYRCLERLATGRPFEEEELEEHPQDGRWFSFDHHTSFSARDPSKVLSNINSRLAQGHVSLKHAKHVFLTLGTAHAYVLLSKERKGREKGEKRVVANCHRLPATSFRRELLDIPKIVSSLQSAIQSIRVINTECTITFTVSPVRHLRNAAGDAIQSSR-SKAQLLAAIHQVLDEDLLSXXXXXXXXXXXXXXXXXXXXXXAYEIMMDDLRDYRFYAPDMIHPSPVALEYIYSRFADAYLDFSPPSFLLRKDLETLRRNLQHRPLDRTSPAHQLFLKQQLIKMEGLQASWPHLDFEAE 440
            P VSH     A+ IL +GSCF++NMG  L EN K  V++NPFG  YNP+S+   L  +  G+ ++E++L  + +   W S  HH  FSA  P +VL  IN+RL+Q H S+     + LT GTA+ Y          +K  ++VV+NCH+LP   F R +L + +IV+   S I S+   N+   + FTVSP+RH+R    D + +++ SK+ LL AI ++                             +YEI++D+LRDYRFYA DM+HPSP+A+ Y++ RF++A+  FS  +  +   +E + ++L H+P    S A+Q FL Q ++K+E L   +P+LDF+ E
Sbjct:   14 PPVSH-----AERILLMGSCFAENMGRLLAEN-KFRVDMNPFGILYNPLSVSTALVEILKGKVYQEKDLFLYKE--CWHSPMHHGLFSASSPEEVLEKINTRLSQAHRSVHELDWLMLTFGTAYVY---------EQKETRQVVSNCHKLPENCFNRRILSVDEIVNEYTSLITSMVARNSRLKVLFTVSPIRHIR----DGMHANQLSKSTLLLAIDRL-----------------QQLFPDHVFYFPSYEIVLDELRDYRFYADDMLHPSPLAVRYLWERFSEAF--FSAETKQVITAIEDIIKDLSHKPFHPESEAYQRFLGQIVLKIERLNGKYPYLDFQKE 319          
BLAST of NO12G02830 vs. NCBI_GenBank
Match: WP_090612427.1 (GSCFA domain protein [Bacteroides sp. AR20] >SEM64291.1 GSCFA family protein [Bacteroides sp. AR20])

HSP 1 Score: 219.2 bits (557), Expect = 2.700e-53
Identity = 128/346 (36.99%), Postives = 199/346 (57.51%), Query Frame = 0
Query:   95 PRVSHRRVYPADPILFLGSCFSDNMGGKLKENLKMNVEINPFGTAYNPVSIYRCLERLATGRPFEEEELEEHPQDGRWFSFDHHTSFSARDPSKVLSNINSRLAQGHVSLKHAKHVFLTLGTAHAYVLLSKERKGREKGEKRVVANCHRLPATSFRRELLDIPKIVSSLQSAIQSIRVINTECTITFTVSPVRHLRNAAGDAIQSSR-SKAQLLAAIHQVLDEDLLSXXXXXXXXXXXXXXXXXXXXXXAYEIMMDDLRDYRFYAPDMIHPSPVALEYIYSRFADAYLDFSPPSFLLRKDLETLRRNLQHRPLDRTSPAHQLFLKQQLIKMEGLQASWPHLDFEAE 440
            P VSH     A+ IL +GSCF++NMG  L EN K  V++NPFG  YNP+S+   L  +  G+ ++E++L  + +   W S  HH  FSA  P +VL  IN+RL+Q H S+     + LT GTA+ Y          +K  ++VV+NCH+LP + F R +L + +IV+   S I S+   N+   + FTVSP+RH+R    D + +++ SK+ LL AI ++                             +YEI++D+LRDYR+YA DM+HPSP+A+ Y++ RF++A+  FS  +  +   +E + ++L H+P    S A+Q FL Q ++K+E L   +P+LDF+ E
Sbjct:   14 PPVSH-----AERILLMGSCFAENMGRLLAEN-KFRVDMNPFGILYNPLSVSTALVEILKGKVYQEKDLFLYKE--CWHSPMHHGLFSASSPEEVLEKINTRLSQAHRSVHELDWLMLTFGTAYVY---------EQKETRQVVSNCHKLPESCFNRRILSVDEIVNEYTSLITSMVARNSHLKVLFTVSPIRHIR----DGMHANQLSKSTLLLAIDRL-----------------QQLFPDHVFYFPSYEIVLDELRDYRYYADDMLHPSPLAVRYLWERFSEAF--FSAETKQVITAIEDIAKDLSHKPFHPESEAYQRFLGQIVLKIERLNGKYPYLDFQKE 319          
BLAST of NO12G02830 vs. NCBI_GenBank
Match: WP_091900512.1 (GSCFA domain-containing protein [Maribacter stanieri] >SFR50422.1 GSCFA family protein [Maribacter stanieri])

HSP 1 Score: 219.2 bits (557), Expect = 2.700e-53
Identity = 124/344 (36.05%), Postives = 193/344 (56.10%), Query Frame = 0
Query:   98 SHRRVYPADPILFLGSCFSDNMGGKLKENLKMNVEINPFGTAYNPVSIYRCLERLATGRPFEEEELEEHPQDGRWFSFDHHTSFSARDPSKVLSNINSRLAQGHVSLKHAKHVFLTLGTAHAYVLLSKERKGREKGEKRVVANCHRLPATSFRRELLDIPKIVSSLQSAIQSIRVINTECTITFTVSPVRHLRNAAGDAIQSSRSKAQLLAAIHQVLDEDLLSXXXXXXXXXXXXXXXXXXXXXXAYEIMMDDLRDYRFYAPDMIHPSPVALEYIYSRFADAYLDFSPPSFLLRKDLETLRRNLQHRPLDRTSPAHQLFLKQQLIKMEGLQASWPHLDFEAERA 442
            S  ++  +  +L LGSCFS+N+G KL E  K     NPFG  ++P++I + ++R      + E+++     + +W  FD H+  S     K++S++N  + Q  V LK   HV +TLGTA  Y+              +VVANCH++P   F +ELL + K+  SLQ  I  ++ +N E    FTVSPVRHL++     +++  SKA L++AIHQV+D D +S                      +YEIM+D+LRDYRFYA DMIHPS +A+EYI+ +F + ++D +    +  K ++ ++R LQHR  +    AHQ FLK    K+  +Q ++P +DF+  +A
Sbjct:   12 SQNQIDYSSQLLLLGSCFSENIGAKL-EYYKFQGLQNPFGILFHPLAIEKVIQRAVQEYVYTEDDV--FFLNEQWHCFDAHSELSNPSKEKIISDLNLEVEQTLVQLKQTSHVIITLGTAWVYL---------NTLNAQVVANCHKVPQKDFTKELLSVSKVKESLQCIIALVKSVNPEVQFIFTVSPVRHLKDG---FVENQLSKAHLISAIHQVIDSDGIS-------------------YFPSYEIMIDELRDYRFYAKDMIHPSEIAIEYIWEKFVEVWIDETSNGVM--KKVDEIKRGLQHRAFNPEGEAHQKFLKSLTHKIAYIQNAYPFMDFKTSKA 319          
BLAST of NO12G02830 vs. NCBI_GenBank
Match: OKZ13964.1 (GSCFA domain protein [Bacteroides sp. 43_46])

HSP 1 Score: 219.2 bits (557), Expect = 2.700e-53
Identity = 132/357 (36.97%), Postives = 200/357 (56.02%), Query Frame = 0
Query:   87 FRTIIPV---TPRVSHRRVYPADPILFLGSCFSDNMGGKLKENLKMNVEINPFGTAYNPVSIYRCLERLATGRPFEEEELEEHPQDGRWFSFDHHTSFSARDPSKVLSNINSRLAQGHVSLKHAKHVFLTLGTAHAYVLLSKERKGREKGEKRVVANCHRLPATSFRRELLDIPKIVSSLQSAIQSIRVINTECTITFTVSPVRHLRNAAGDAIQSSR-SKAQLLAAIHQVLDEDLLSXXXXXXXXXXXXXXXXXXXXXXAYEIMMDDLRDYRFYAPDMIHPSPVALEYIYSRFADAYLDFSPPSFLLRKDLETLRRNLQHRPLDRTSPAHQLFLKQQLIKMEGLQASWPHLDFEAE 440
            FRT + +    P V+H     A  IL LGSCF++NMG +L EN K  V++NPFG  YNP S+   L  +  G+ ++EE+L  + +   W S  HH SFSA    +V+ NIN RL Q H ++     + LT GTA+ Y          +K   RVV+NCH+LP ++F R LL + +IV+   S I  +   N    + FTVSP+RH+R    D + +++ SK+ LL  I ++                             AYEI++D+LRDYRFYA DM+HPSP+A+ Y++  F+D++  FS  +  +  ++E +R+++ H+P    S A+Q FL Q ++K+E L   +P+LDF+ E
Sbjct:    3 FRTKVELPASLPPVTH-----AGQILLLGSCFAENMGRQLAEN-KFRVDVNPFGILYNPFSVSTALVEILKGKVYQEEDLFAYKE--CWHSPMHHGSFSAATAGEVIRNINHRLQQAHKTVHQLDWLMLTFGTAYVY---------EQKETGRVVSNCHKLPESNFNRRLLSVDEIVNEYTSLIAGMTARNPNLKVLFTVSPIRHIR----DGMHANQLSKSTLLLTIDRL-----------------QQLFPKQVFYFPAYEIVLDELRDYRFYADDMLHPSPLAVNYLWKCFSDSF--FSAETKQVMTEVEDIRKDMAHKPFHPESEAYQRFLGQIVLKIERLIGKYPYLDFQKE 319          
The following BLAST results are available for this feature:
BLAST of NO12G02830 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
SCG99164.19.200e-5437.82GSCFA family [uncultured Bacteroides sp.][more]
WP_072066241.19.200e-5437.28GSCFA domain protein [Bacteroides thetaiotaomicron... [more]
WP_022300740.11.200e-5337.07lipoprotein [Bacteroides sp. HMSC067B03] >CDC89945... [more]
WP_066632321.11.200e-5335.08hypothetical protein [Labilibacter marinus][more]
OKZ24996.11.200e-5337.82GSCFA domain protein [Bacteroides finegoldii][more]
WP_008764326.12.700e-5336.99MULTISPECIES: hypothetical protein [Bacteroides] >... [more]
WP_055216636.12.700e-5337.28GSCFA domain protein [Bacteroides thetaiotaomicron... [more]
WP_090612427.12.700e-5336.99GSCFA domain protein [Bacteroides sp. AR20] >SEM64... [more]
WP_091900512.12.700e-5336.05GSCFA domain-containing protein [Maribacter stanie... [more]
OKZ13964.12.700e-5336.97GSCFA domain protein [Bacteroides sp. 43_46][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL127nonsL127Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL125nonsL125Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL124nonsL124Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR015ncniR015Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR014ncniR014Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR009ngnoR009Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR007ngnoR007Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR006ngnoR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010223NSK010223Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO12G02830.1NO12G02830.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO12G02830.2NO12G02830.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|671507gene_5454Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100162g2gene4758Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO12G02830.1NO12G02830.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO12G02830.2NO12G02830.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO12G02830 ID=NO12G02830|Name=NO12G02830|organism=Nannochloropsis oceanica|type=gene|length=2225bp
GTGTAGAGAGGTGAGTGGGGACGCGCGAAGAACACAGCTGTTTGAATTCA
GCGAATGGGTTGTCAACTTCGTACGTCCAAACTACTTGACCCACCGCCAC
AGTCAATTATAATTGCCGCCACCATGCACAGGACGAGGACCTGCACTTGA
GAGGATATCAAGGTGCGGACAACAAGGCCAGGGCTTGCAGGGGCAGTTCA
AAAGCCTCAATCATCATTCTCCACCCCTACCACATTAGTCCTCACTCCCT
GCTCACATTAGTCCTCACTCCCCCCAGTCCGTCTTGGTCCACCACATGCT
TATGGCAGCCTGTTCCCCACGCCGTCACACCTCCCTACCACGACTTCTCC
TGATCCCGCAGCTCTTCCTCTTTGCTTCCTCCTCTTCAGTGGCGCCATCA
TTTATCCTCGTCCCTCCATCACTTCTACCTCCCCATCGTGCTTTCGCCAT
CTTTAAGCCGCAGCCCAGCAGTTGGAGCAGCACCAGCAGCAGGCGCATTT
CATCTTCACTATCCCGAAATTCCTCCCCCTCCCTCTCCTCGTTCGACATA
CCCTTCCGTACCATCATTCCCGTTACTCCTCGCGTCTCTCACCGACGCGT
CTACCCCGCAGACCCTATTCTGTTCCTCGGCTCCTGCTTCTCAGACAATA
TGGGCGGGAAACTTAAAGAGAATCTAAAAATGAATGTGGAGATCAACCCC
TTTGGCACAGCATATAATCCGGTATCGATTTACCGGTGCTTGGAGCGCTT
GGCGACTGGGAGGCCATTTGAGGAGGAAGAGTTGGAGGAGCATCCCCAGG
ATGGACGGTGGTTCAGgtgagaaaagagggagagaagaattgcagaggct
gggctggagagagaatgaaggcggattgaatcctctcctgatagaggctg
caaaaaattaaatcctttaaacaaaccgaaaaacaaacaaatttgggaaa
tgaatagaccagtatgaagggcttggcattgactcacgctccaactcata
ctcccgagcccccccccatcccctcatcctgcccacaccacgttaagCTT
TGACCACCACACCAGCTTCAGTGCCCGTGATCCGAGTAAGGTCTTGTCGA
ATATTAACTCCCGCCTGGCTCAAGGCCACGTCTCATTAAAGCATGCCAAG
CATGTCTTTTTGACTCTGGGAACAGCACACGCGTATGTGCTTCTATCCAA
GGAGAGGAAGGGAAGGGAGAAAGGGGAAAAGAGGGTTGTGGCGAATTGCC
ATCGGTTGCCGGCGACGAGCTTTCGACGGGAATTGCTCGgtgcgaaaaac
acttttgagacaaaataaagaacttgtttttcttaagatgtagtcgcctt
cccctcattctgcctctgtatttcacgccctcctcttaagtttccattct
cacatttaccattttcctctcctgtcccctcttcacgaacagACATACCC
AAGATCGTCTCATCCCTCCAATCGGCCATTCAATCCATACGGGTCATCAA
CACAGAGTGCACTATCACCTTCACTGTCTCTCCTGTCAGACATCTCCGCA
ACGCCGCCGGGGACGCAAgtatgtaacgctcttgcccttgccttcacgtc
ctcccgcttctcaatctcgtcttcccatcctcttaacccacacaatatgc
aacagTTCAAAGCTCTCGCAGCAAAGCCCAACTTCTCGCTGCCATCCACC
AAGTCCTCGATGAAGACCTTCTTTCACCCTCCTCCTCTCCTTCCGTTTCC
CCCTCTTCCTCCCCTTCCTCCTCTCTCCTCTCCTATTTTCCCGCCTATGA
AATCATGATGGATGATCTGCGTGATTACCGTTTTTATGCCCCCGACATGA
TCCATCCCTCCCCTGTCGCACTCGAATACATCTACTCGCGCTTCGCCGAC
GCCTACCTAGACTTCTCCCCGCCTTCCTTTCTCCTTCGCAAAGACCTTGA
GACTTTACGACGCAACCTACAACACCGTCCGTTAGACAGGACAAGTCCGG
CGCACCAGCTATTCTTGAAGCAGCAGTTGATTAAAATGGAAGGGTTGCAA
GCCTCGTGGCCGCATTTGGACTTTGAAGCCGAGCGGGCAGTGGTCAGGAA
GGGATTGGTGGAGTGAAGCGAGAATTAGCTATGTCCATAGTGAGACAGGG
CAAATAGGAAATGTGCTCATAAAAGAAAATCATCAAATAAACTCAAAATA
TGACCAACATGGCAGGTAGCGAAGA
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protein sequence of NO12G02830.1

>NO12G02830.1-protein ID=NO12G02830.1-protein|Name=NO12G02830.1|organism=Nannochloropsis oceanica|type=polypeptide|length=450bp
MLMAACSPRRHTSLPRLLLIPQLFLFASSSSVAPSFILVPPSLLPPHRAF
AIFKPQPSSWSSTSSRRISSSLSRNSSPSLSSFDIPFRTIIPVTPRVSHR
RVYPADPILFLGSCFSDNMGGKLKENLKMNVEINPFGTAYNPVSIYRCLE
RLATGRPFEEEELEEHPQDGRWFSFDHHTSFSARDPSKVLSNINSRLAQG
HVSLKHAKHVFLTLGTAHAYVLLSKERKGREKGEKRVVANCHRLPATSFR
RELLDIPKIVSSLQSAIQSIRVINTECTITFTVSPVRHLRNAAGDAIQSS
RSKAQLLAAIHQVLDEDLLSPSSSPSVSPSSSPSSSLLSYFPAYEIMMDD
LRDYRFYAPDMIHPSPVALEYIYSRFADAYLDFSPPSFLLRKDLETLRRN
LQHRPLDRTSPAHQLFLKQQLIKMEGLQASWPHLDFEAERAVVRKGLVE*
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protein sequence of NO12G02830.2

>NO12G02830.2-protein ID=NO12G02830.2-protein|Name=NO12G02830.2|organism=Nannochloropsis oceanica|type=polypeptide|length=450bp
MLMAACSPRRHTSLPRLLLIPQLFLFASSSSVAPSFILVPPSLLPPHRAF
AIFKPQPSSWSSTSSRRISSSLSRNSSPSLSSFDIPFRTIIPVTPRVSHR
RVYPADPILFLGSCFSDNMGGKLKENLKMNVEINPFGTAYNPVSIYRCLE
RLATGRPFEEEELEEHPQDGRWFSFDHHTSFSARDPSKVLSNINSRLAQG
HVSLKHAKHVFLTLGTAHAYVLLSKERKGREKGEKRVVANCHRLPATSFR
RELLDIPKIVSSLQSAIQSIRVINTECTITFTVSPVRHLRNAAGDAIQSS
RSKAQLLAAIHQVLDEDLLSPSSSPSVSPSSSPSSSLLSYFPAYEIMMDD
LRDYRFYAPDMIHPSPVALEYIYSRFADAYLDFSPPSFLLRKDLETLRRN
LQHRPLDRTSPAHQLFLKQQLIKMEGLQASWPHLDFEAERAVVRKGLVE*
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Synonyms
Publications