NO12G02800, NO12G02800 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO12G02800 vs. NCBI_GenBank
Match: EWM25754.1 (fatty-acyl elongase [Nannochloropsis gaditana]) HSP 1 Score: 382.5 bits (981), Expect = 9.800e-103 Identity = 181/209 (86.60%), Postives = 197/209 (94.26%), Query Frame = 0 Query: 5 LPRIMKNRPVKDLSKPLAFWNFFLAVYSTIGAIRVVPHLLWFISTHTFKETVCTAPYRINGDGATGLWVTLFTLSKVVELVDTLFICLKGKKPIFLHWYHHVSVLYFTWAAHEAAHAGMYFIGMNYTVHSVMYSYYFLMAIKAKPKWLNPIYITFMQIAQMIVGVIITAFGFYYSSKDATCAVDPFVLKISGVIYASYLYLFMEFMIKR 214 LP IMK RP+K+LS PLA WN FLAVYSTIGA+RVVPHLLWF+STHTFK+TVCTAPY INGDGATGLWVTLFTLSKV EL+D+L+ICLKG++PIFLHWYHHVSVLYFTWAAHEAAH GMYFI MNYTVHSVMY+YYFLMAIKAKPKWLNPIYITFMQIAQM+VGVII+ FGFYYSS DA+CAVDPFVLK+S VIYASYLYLFM+FMIKR Sbjct: 90 LPMIMKKRPLKNLSTPLACWNLFLAVYSTIGAVRVVPHLLWFMSTHTFKQTVCTAPYYINGDGATGLWVTLFTLSKVAELIDSLWICLKGRRPIFLHWYHHVSVLYFTWAAHEAAHPGMYFIAMNYTVHSVMYTYYFLMAIKAKPKWLNPIYITFMQIAQMLVGVIISCFGFYYSSMDASCAVDPFVLKVSAVIYASYLYLFMQFMIKR 298
BLAST of NO12G02800 vs. NCBI_GenBank
Match: EWM25755.1 (fatty-acyl elongase [Nannochloropsis gaditana]) HSP 1 Score: 316.2 bits (809), Expect = 8.600e-83 Identity = 148/213 (69.48%), Postives = 175/213 (82.16%), Query Frame = 0 Query: 1 MIVFLPRIMKNRPVKDLSKPLAFWNFFLAVYSTIGAIRVVPHLLWFISTHTFKETVCTAPYRINGDGATGLWVTLFTLSKVVELVDTLFICLKGKKPIFLHWYHHVSVLYFTWAAHEAAHAGMYFIGMNYTVHSVMYSYYFLMAIKAKPKWLNPIYITFMQIAQMIVGVIITAFGFYYSSKDATCAVDPFVLKISGVIYASYLYLFMEFMIKR 214 M++ LP I RPVK LA+WN LA +S +GA+R+VPHLLWF++TH+FKETVCT P R+NGDGA+GLW LFTLSK+VELVDT+F+CLKG+KPIFLHWYHHV+VL FTWAA+ A H GMYFI MNYTVH+VMYSYYFLMAIKAKPKWLNPIYITF+QI QM+ GVIIT +GF Y+ +TC V P VL VIY SYLYLF+EF++KR Sbjct: 84 MVLLLPPITSKRPVK-CDTALAYWNLLLAAFSILGALRIVPHLLWFLTTHSFKETVCTPPERMNGDGASGLWCLLFTLSKLVELVDTMFVCLKGRKPIFLHWYHHVTVLSFTWAAYSARHPGMYFIAMNYTVHAVMYSYYFLMAIKAKPKWLNPIYITFLQIFQMVAGVIITVYGFIYARDPSTCGVVPSVLYFQSVIYGSYLYLFLEFLVKR 295
BLAST of NO12G02800 vs. NCBI_GenBank
Match: EWM29833.1 (elongation of very long chain fatty acids protein 6 [Nannochloropsis gaditana]) HSP 1 Score: 223.8 bits (569), Expect = 5.800e-55 Identity = 109/193 (56.48%), Postives = 144/193 (74.61%), Query Frame = 0 Query: 22 AFWNFFLAVYSTIGAIRVVPHLLWFISTHTFKETVCTAPYRIN-GDGATGLWVTLFTLSKVVELVDTLFICLKGKKPIFLHWYHHVSVLYFTWAAHEAAHAGMYFIGMNYTVHSVMYSYYFLMAIKAKPKWLNPIYITFMQIAQMIVGVIITAFGFYYSSKDATCAVDPFVLKISGVIYASYLYLFMEFMIKR 214 A WN FLA++S GA+RVVPH L+ + FKETVC AP GDGA GLWV LFT+SKV EL+DT+ + LKGK P+FLHWYHHV+VL +TW ++ A + G+YFI MNYTVH+VMYSYYFLM ++ PKWL+P++IT MQI+QM+VGV +TA + Y + D +CAV ++ +YA+YLY F+EF ++R Sbjct: 100 ALWNGFLALFSIAGALRVVPHFLFLFTHKDFKETVCEAPDAAGYGDGAAGLWVMLFTVSKVFELMDTVILVLKGKDPMFLHWYHHVTVLLYTWFSYSARNPGLYFIAMNYTVHAVMYSYYFLMELRLWPKWLSPVFITLMQISQMLVGVGVTAAAYSYQA-DPSCAVVRDLIPWCAAMYATYLYFFVEFFVER 291
BLAST of NO12G02800 vs. NCBI_GenBank
Match: EWM28304.1 (fatty-acyl [Nannochloropsis gaditana]) HSP 1 Score: 210.3 bits (534), Expect = 6.700e-51 Identity = 101/206 (49.03%), Postives = 136/206 (66.02%), Query Frame = 0 Query: 8 IMKNRPVKDLSKPLAFWNFFLAVYSTIGAIRVVPHLLWFISTHTFKETVCTAPYRINGDGATGLWVTLFTLSKVVELVDTLFICLKGKKPIFLHWYHHVSVLYFTWAAHEAAHAGMYFIGMNYTVHSVMYSYYFLMAIKAKPKWLNPIYITFMQIAQMIVGVIITAFGFYYSSKDATCAVDPFVLKISGVIYASYLYLFMEFMIKR 214 +MKNR DL PLA+WN L+++S +G +RVVPHL++ +T C AP + G+ A G WV F LSK+ EL+DT FI L+ K FLHWYHHV+VL FTW + + G+ F+ MNY+VH++MY YYFLMA++ +P WL P +IT MQI+QM+VGV AF CAVD +L GV+Y++YLYLF EF ++R Sbjct: 95 LMKNRKPFDLKWPLAYWNLALSLFSIMGMVRVVPHLIYLTATKGLGVVACGAPEPLYGNAAVGFWVQAFILSKLAELIDTAFIVLRKKPLQFLHWYHHVTVLLFTWFCYTHENPGIIFVAMNYSVHAIMYGYYFLMAVRVRPSWLKPQFITLMQISQMVVGVATAAFYIMKIRAGEECAVDQDLLVACGVMYSTYLYLFCEFAVRR 300
BLAST of NO12G02800 vs. NCBI_GenBank
Match: EWM21810.1 (fatty-acyl elongase [Nannochloropsis gaditana]) HSP 1 Score: 209.1 bits (531), Expect = 1.500e-50 Identity = 100/184 (54.35%), Postives = 135/184 (73.37%), Query Frame = 0 Query: 22 AFWNFFLAVYSTIGAIRVVPHLLWFISTHTFKETVCTAPYRIN-GDGATGLWVTLFTLSKVVELVDTLFICLKGKKPIFLHWYHHVSVLYFTWAAHEAAHAGMYFIGMNYTVHSVMYSYYFLMAIKAKPKWLNPIYITFMQIAQMIVGVIITAFGFYYSSKDATCAVDPFVLKISGVIYASYLY 205 AFWN FLA +S +GA RVVPH L+ + FK TVC AP + GDGA G+WV LFT+SK+ ELVDT+ + LKGK P+FLHWYHHV+VL +TW ++ A + G+YF+ MNY+VH++MYSYYFLM ++ PKW NP++IT QI QM+VGV IT F++ S+D +CA+ ++ +YA+YLY Sbjct: 106 AFWNAFLAAFSVLGATRVVPHFLFLFTHKDFKTTVCEAPDKAGYGDGAAGMWVMLFTVSKLFELVDTVILVLKGKDPMFLHWYHHVTVLLYTWFSYSARNPGIYFVAMNYSVHALMYSYYFLMELRLWPKWFNPMWITMAQILQMLVGVGITVSAFFF-SRDPSCALVRGLIPWCAAMYATYLY 288
BLAST of NO12G02800 vs. NCBI_GenBank
Match: XP_005855601.1 (fatty-acyl [Nannochloropsis gaditana CCMP526] >EKU20764.1 fatty-acyl [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 201.4 bits (511), Expect = 3.100e-48 Identity = 104/215 (48.37%), Postives = 139/215 (64.65%), Query Frame = 0 Query: 1 MIVFLPRIMKNRPVKDLSKPLAFWNFFLAVYSTIGAIRVVPHLLWFISTHTFKETVCTAPYRINGDGATGLWVTLFTLSKVVELVDTLFICLKGKKPIFLHWYHHVSVLYFTWAAHE-AAHAGMYFIGMNYTVHSVMYSYYFLMAIKAKPKWLNPIYITFMQIAQMIVGVIITAFGFYYSSKDAT-CAVDPFVLKISGVIYASYLYLFMEFMIKR 214 MIV ++M++RP + LA WN L+V+S G +R VPHLL ++T FK+T+C P G+GA GLWV LF SKV ELVDT+FI + K FLHWYHH++VL F W ++ + G+YF+ MNY+VH+VMY+YY+L AIKA P W+ P IT QI+QM+VGV I FYY D C V P + ++Y SYLYLF +F ++R Sbjct: 79 MIVVGTKVMESRPKHEWKTALACWNLLLSVFSFCGMLRTVPHLLQNVTTLPFKDTICRHPAETYGEGACGLWVMLFIYSKVPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYAVTSSTGLYFVAMNYSVHAVMYAYYYLTAIKAWPSWIPPSIITVAQISQMMVGVGICVASFYYLYTDPEHCEVKPQNVYSGALMYGSYLYLFCDFFVRR 293
BLAST of NO12G02800 vs. NCBI_GenBank
Match: EWM29442.1 (fatty-acyl [Nannochloropsis gaditana]) HSP 1 Score: 201.4 bits (511), Expect = 3.100e-48 Identity = 104/215 (48.37%), Postives = 139/215 (64.65%), Query Frame = 0 Query: 1 MIVFLPRIMKNRPVKDLSKPLAFWNFFLAVYSTIGAIRVVPHLLWFISTHTFKETVCTAPYRINGDGATGLWVTLFTLSKVVELVDTLFICLKGKKPIFLHWYHHVSVLYFTWAAHE-AAHAGMYFIGMNYTVHSVMYSYYFLMAIKAKPKWLNPIYITFMQIAQMIVGVIITAFGFYYSSKDAT-CAVDPFVLKISGVIYASYLYLFMEFMIKR 214 MIV ++M++RP + LA WN L+V+S G +R VPHLL ++T FK+T+C P G+GA GLWV LF SKV ELVDT+FI + K FLHWYHH++VL F W ++ + G+YF+ MNY+VH+VMY+YY+L AIKA P W+ P IT QI+QM+VGV I FYY D C V P + ++Y SYLYLF +F ++R Sbjct: 79 MIVVGTKVMESRPKHEWKTALACWNLLLSVFSFCGMLRTVPHLLHNVTTLPFKDTICRHPAETYGEGACGLWVMLFIYSKVPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYAVTSSTGLYFVAMNYSVHAVMYAYYYLTAIKAWPSWIPPSIITVAQISQMMVGVGICVASFYYLYTDPEHCEVKPQNVYSGALMYGSYLYLFCDFFVRR 293
BLAST of NO12G02800 vs. NCBI_GenBank
Match: XP_002184740.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC43799.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 199.1 bits (505), Expect = 1.500e-47 Identity = 97/197 (49.24%), Postives = 138/197 (70.05%), Query Frame = 0 Query: 21 LAFWNFFLAVYSTIGAIRVVPHLLWFISTHTFKETVCTAPYRINGDGATGLWVTLFTLSKVVELVDTLFICLKGKKPIFLHWYHHVSVLYFTWAAH-EAAHAGMYFIGMNYTVHSVMYSYYFLMAIKAKPKWLNPIYITFMQIAQMIVGVIITAFGFYYSSKDA---TCAVDPFVLKISGVIYASYLYLFMEFMIKR 214 LA WN FLA++S +G +R P L+ ++T T +E +C P G G+TGLWV LF LSK EL+DT+FI + KK IFLHWYHH++VL + W ++ + G++F+ MNYTVH+ MY YYFLMAI+A+P+WLNP+ +T MQI+QM+VGV +T GFYYS++ A +C + + V+Y SYL+LF++F + R Sbjct: 38 LAAWNLFLALFSLVGMLRTFPQLVHNLATLTLRENLCANPQATYGSGSTGLWVQLFILSKFPELIDTVFIIVNKKKLIFLHWYHHITVLLYCWHSYVTKSPPGIFFVVMNYTVHASMYGYYFLMAIRARPRWLNPMIVTTMQISQMVVGVAVTLLGFYYSARAADHQSCRIKRENNTAAFVMYGSYLFLFLQFFVGR 234
BLAST of NO12G02800 vs. NCBI_GenBank
Match: XP_002293395.1 (long chain fatty acid elongase [Thalassiosira pseudonana CCMP1335] >EED89131.1 long chain fatty acid elongase [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 198.4 bits (503), Expect = 2.600e-47 Identity = 98/217 (45.16%), Postives = 142/217 (65.44%), Query Frame = 0 Query: 1 MIVFLPRIMKNRPVKDLSKPLAFWNFFLAVYSTIGAIRVVPHLLWFISTHTFKETVCTAPYRINGDGATGLWVTLFTLSKVVELVDTLFICLKGKKPIFLHWYHHVSVLYFTWAAH-EAAHAGMYFIGMNYTVHSVMYSYYFLMAIKAKPKWLNPIYITFMQIAQMIVGVIITAFGFYYSSK---DATCAVDPFVLKISGVIYASYLYLFMEFMIKR 214 +IV MK+RP + LA WN L+++S IGAIR P L + ++T++ ++ +C P + G G+TGLWV LF LSK EL+DT FI + K IFLHWYHH++VL + W ++ + +G++F+ MNY+VH+VMY YYFLMA+K +PKW NP+++TFMQ++QM +GV +T FYY S TC + + V+Y SY YLF +F + R Sbjct: 69 LIVLGRAYMKDRPAWSWRRILAVWNLSLSLFSWIGAIRTAPQLYYNLTTYSLRDNLCDDPAALYGSGSTGLWVQLFILSKFPELLDTFFIVIHKKPLIFLHWYHHITVLLYCWHSYVTTSPSGLFFVVMNYSVHAVMYGYYFLMAVKFRPKWFNPMFVTFMQLSQMFIGVGVTIVAFYYYSNPILGKTCHIRKENNVAAFVMYGSYFYLFAQFFVAR 285
BLAST of NO12G02800 vs. NCBI_GenBank
Match: ACV21066.1 (fatty acid elongase [Nannochloropsis oculata]) HSP 1 Score: 197.6 bits (501), Expect = 4.500e-47 Identity = 101/215 (46.98%), Postives = 138/215 (64.19%), Query Frame = 0 Query: 1 MIVFLPRIMKNRPVKDLSKPLAFWNFFLAVYSTIGAIRVVPHLLWFISTHTFKETVCTAPYRINGDGATGLWVTLFTLSKVVELVDTLFICLKGKKPIFLHWYHHVSVLYFTWAAHE-AAHAGMYFIGMNYTVHSVMYSYYFLMAIKAKPKWLNPIYITFMQIAQMIVGVIITAFGFYYSSKDAT-CAVDPFVLKISGVIYASYLYLFMEFMIKR 214 MI+ ++M +RP + LA WN L+++S G IR VPHLL ++T FK+T+C P G+GA G+WV LF SKV ELVDT+FI + K FLHWYHH++VL F W ++ + G+YF+ MNY+VH++MY+YY+L AI A PKW+ P IT QI+QMIVGV I A FY+ D C V + ++Y SYLYLF +F ++R Sbjct: 81 MIIVGTKVMVSRPKHEWKTALACWNLMLSIFSFCGMIRTVPHLLHNVATLPFKDTICRHPAETYGEGACGMWVMLFIFSKVPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYAVTSSTGLYFVAMNYSVHAIMYAYYYLTAINAWPKWIPPSIITVAQISQMIVGVGICASSFYFLYTDPEHCQVKRQNVYAGALMYGSYLYLFCDFFVRR 295 The following BLAST results are available for this feature:
BLAST of NO12G02800 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO12G02800 ID=NO12G02800|Name=NO12G02800|organism=Nannochloropsis oceanica|type=gene|length=2809bpback to top protein sequence of NO12G02800.2 >NO12G02800.2-protein ID=NO12G02800.2-protein|Name=NO12G02800.2|organism=Nannochloropsis oceanica|type=polypeptide|length=242bpback to top protein sequence of NO12G02800.1 >NO12G02800.1-protein ID=NO12G02800.1-protein|Name=NO12G02800.1|organism=Nannochloropsis oceanica|type=polypeptide|length=324bpback to top Synonyms
Publications
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