NO12G02790, NO12G02790 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO12G02790 vs. NCBI_GenBank
Match: EWM25755.1 (fatty-acyl elongase [Nannochloropsis gaditana]) HSP 1 Score: 500.4 bits (1287), Expect = 4.900e-138 Identity = 231/287 (80.49%), Postives = 258/287 (89.90%), Query Frame = 0 Query: 11 CTSSFYCPPSTLIPVTRELAGNTYTFLQFWQLFPWTKPFYTPFEKNFDVRPWFMFVHGNWWLPVVAIALYGVMIVTLPKYTAKKPVKCDVALAYWNFFLAVFSTLGAIRIVPHLLWFSATHTFKDTVCTPPQMMNGDGASGLWCLLFTLSKVIELLDTLFVCLKGRTPIFLHWYHHVTVLSFTWTAYAARHPGVYFIAMNYTVHAVMYSYYFLMAINAKPKWLNPMYITFLQISQMVAGVVITLCGFHYIARDPSTCGVVPHVLYFQGLIYGSYLYLFLEFLIKRFF 298 CTSS YCPPS+L+PVTRELAG+TYTFLQFWQLFPW++PFYT EK FDVRPW++FVH N WLPVV+I LY M++ LP T+K+PVKCD ALAYWN LA FS LGA+RIVPHLLWF TH+FK+TVCTPP+ MNGDGASGLWCLLFTLSK++EL+DT+FVCLKGR PIFLHWYHHVTVLSFTW AY+ARHPG+YFIAMNYTVHAVMYSYYFLMAI AKPKWLNP+YITFLQI QMVAGV+IT+ GF Y ARDPSTCGVVP VLYFQ +IYGSYLYLFLEFL+KRFF Sbjct: 12 CTSSLYCPPSSLVPVTRELAGHTYTFLQFWQLFPWSEPFYTRLEKEFDVRPWYLFVHANGWLPVVSIILYAAMVLLLPPITSKRPVKCDTALAYWNLLLAAFSILGALRIVPHLLWFLTTHSFKETVCTPPERMNGDGASGLWCLLFTLSKLVELVDTMFVCLKGRKPIFLHWYHHVTVLSFTWAAYSARHPGMYFIAMNYTVHAVMYSYYFLMAIKAKPKWLNPIYITFLQIFQMVAGVIITVYGFIY-ARDPSTCGVVPSVLYFQSVIYGSYLYLFLEFLVKRFF 297
BLAST of NO12G02790 vs. NCBI_GenBank
Match: EWM25754.1 (fatty-acyl elongase [Nannochloropsis gaditana]) HSP 1 Score: 383.3 bits (983), Expect = 8.700e-103 Identity = 183/309 (59.22%), Postives = 230/309 (74.43%), Query Frame = 0 Query: 6 INATTCTSSFYCPPSTLIPVTR--ELAGNTYTFLQFWQLFPWTKPFYTPFEKNFDVRPWFMFVHGNWWLPVVAIALYGVMIVTLPKYTAKKPVK-CDVALAYWNFFLAVFSTLGAIRIVPHLLWFSATHTFKDTVCTPPQMMNGDGASGLWCLLFTLSKVIELLDTLFVCLKGRTPIFLHWYHHVTVLSFTWTAYAARHPGVYFIAMNYTVHAVMYSYYFLMAINAKPKWLNPMYITFLQISQMVAGVVITLCGFHYIARDPSTCGVVPHVLYFQGLIYGSYLYLFLEFLIKRFF-SSSKKGSSSLVSS 311 + CTS +YCPP TL TR TY+F+QFWQL+PW + FY PFEKNF+ P F FV GNWW+ +++A+Y LP K+P+K LA WN FLAV+ST+GA+R+VPHLLWF +THTFK TVCT P +NGDGA+GLW LFTLSKV EL+D+L++CLKGR PIFLHWYHHV+VL FTW A+ A HPG+YFIAMNYTVH+VMY+YYFLMAI AKPKWLNP+YITF+QI+QM+ GV+I+ GF+Y + D S C V P VL +IY SYLYLF++F+IKRFF +++ G V++ Sbjct: 7 MTTAVCTSQWYCPPETLTATTRVYTARNTTYSFIQFWQLYPWLENFYAPFEKNFNPLPIFEFVSGNWWVVYISLAIYMXXXXXLPMIMKKRPLKNLSTPLACWNLFLAVYSTIGAVRVVPHLLWFMSTHTFKQTVCTAPYYINGDGATGLWVTLFTLSKVAELIDSLWICLKGRRPIFLHWYHHVSVLYFTWAAHEAAHPGMYFIAMNYTVHSVMYTYYFLMAIKAKPKWLNPIYITFMQIAQMLVGVIISCFGFYYSSMDAS-CAVDPFVLKVSAVIYASYLYLFMQFMIKRFFVKNARAGQEGKVAA 314
BLAST of NO12G02790 vs. NCBI_GenBank
Match: EWM29833.1 (elongation of very long chain fatty acids protein 6 [Nannochloropsis gaditana]) HSP 1 Score: 269.6 bits (688), Expect = 1.400e-68 Identity = 139/274 (50.73%), Postives = 187/274 (68.25%), Query Frame = 0 Query: 36 FLQFWQLFPWTKPFYTPFEKNFDVRPWFMFVHGNWWLPVVAIALYGVMIVTLPKY------TAKKPVKCDVALAYWNFFLAVFSTLGAIRIVPHLLWFSATHTFKDTVCTPPQMMN-GDGASGLWCLLFTLSKVIELLDTLFVCLKGRTPIFLHWYHHVTVLSFTWTAYAARHPGVYFIAMNYTVHAVMYSYYFLMAINAKPKWLNPMYITFLQISQMVAGVVITLCGFHYIARDPSTCGVVPHVLYFQGLIYGSYLYLFLEFLIKRFFSSSKK 303 F+Q +Q P +PFYT +EK+FDV F + + W+P++A+ LY +V KY K PV A WN FLA+FS GA+R+VPH L+ FK+TVC P GDGA+GLW +LFT+SKV EL+DT+ + LKG+ P+FLHWYHHVTVL +TW +Y+AR+PG+YFIAMNYTVHAVMYSYYFLM + PKWL+P++IT +QISQM+ GV +T + Y A DPS C VV ++ + +Y +YLY F+EF ++RF ++S K Sbjct: 27 FVQVFQAIPALEPFYTEWEKHFDVSAPFRAIRDSKWVPIMAVILYLSFLVEGKKYIERRKKEGKGPVNLGYFPALWNGFLALFSIAGALRVVPHFLFLFTHKDFKETVCEAPDAAGYGDGAAGLWVMLFTVSKVFELMDTVILVLKGKDPMFLHWYHHVTVLLYTWFSYSARNPGLYFIAMNYTVHAVMYSYYFLMELRLWPKWLSPVFITLMQISQMLVGVGVTAAAYSYQA-DPS-CAVVRDLIPWCAAMYATYLYFFVEFFVERFLAASTK 298
BLAST of NO12G02790 vs. NCBI_GenBank
Match: EWM21810.1 (fatty-acyl elongase [Nannochloropsis gaditana]) HSP 1 Score: 254.6 bits (649), Expect = 4.700e-64 Identity = 129/258 (50.00%), Postives = 172/258 (66.67%), Query Frame = 0 Query: 36 FLQFWQLFPWTKPFYTPFEKNFDVRPWFMFVHGNWWLPVVAIALYGVMIVTLPKY------TAKKPVKCDVALAYWNFFLAVFSTLGAIRIVPHLLWFSATHTFKDTVCTPPQMMN-GDGASGLWCLLFTLSKVIELLDTLFVCLKGRTPIFLHWYHHVTVLSFTWTAYAARHPGVYFIAMNYTVHAVMYSYYFLMAINAKPKWLNPMYITFLQISQMVAGVVITLCGFHYIARDPSTCGVVPHVLYFQGLIYGSYLY 287 F+Q +Q PW +PFY +EKNFDV F + N LP+VA LY ++ KY K P+ + A+WN FLA FS LGA R+VPH L+ FK TVC P GDGA+G+W +LFT+SK+ EL+DT+ + LKG+ P+FLHWYHHVTVL +TW +Y+AR+PG+YF+AMNY+VHA+MYSYYFLM + PKW NPM+IT QI QM+ GV IT+ F + +RDPS C +V ++ + +Y +YLY Sbjct: 33 FVQVFQSLPWLEPFYMEWEKNFDVSSSFQVIRDNEALPIVATILYLSFLIEGKKYIERRRREGKGPINLGLFPAFWNAFLAAFSVLGATRVVPHFLFLFTHKDFKTTVCEAPDKAGYGDGAAGMWVMLFTVSKLFELVDTVILVLKGKDPMFLHWYHHVTVLLYTWFSYSARNPGIYFVAMNYSVHALMYSYYFLMELRLWPKWFNPMWITMAQILQMLVGVGITVSAF-FFSRDPS-CALVRGLIPWCAAMYATYLY 288
BLAST of NO12G02790 vs. NCBI_GenBank
Match: XP_005855601.1 (fatty-acyl [Nannochloropsis gaditana CCMP526] >EKU20764.1 fatty-acyl [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 243.4 bits (620), Expect = 1.100e-60 Identity = 129/269 (47.96%), Postives = 164/269 (60.97%), Query Frame = 0 Query: 36 FLQFWQLFPWTKPFYTPFEKNFDVRPWFMFVHGNW-WLPVVAIALYGVMIVTLPKYTAKKPV-KCDVALAYWNFFLAVFSTLGAIRIVPHLLWFSATHTFKDTVCTPPQMMNGDGASGLWCLLFTLSKVIELLDTLFVCLKGRTPIFLHWYHHVTVLSFTWTAYA-ARHPGVYFIAMNYTVHAVMYSYYFLMAINAKPKWLNPMYITFLQISQMVAGVVITLCGFHYIARDPSTCGVVPHVLYFQGLIYGSYLYLFLEFLIKRFFSSSK 302 F Q +Q +P PFYT +EKNF + F W LP+ +YG+MIV K +P + ALA WN L+VFS G +R VPHLL T FKDT+C P G+GA GLW +LF SKV EL+DT+F+ + FLHWYHH+TVL F W +YA G+YF+AMNY+VHAVMY+YY+L AI A P W+ P IT QISQM+ GV I + F+Y+ DP C V P +Y L+YGSYLYLF +F ++RF K Sbjct: 31 FTQLFQHYPVLSPFYTEYEKNFHASSYVNFAQNTWPALPLALCGIYGLMIVVGTKVMESRPKHEWKTALACWNLLLSVFSFCGMLRTVPHLLQNVTTLPFKDTICRHPAETYGEGACGLWVMLFIYSKVPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYAVTSSTGLYFVAMNYSVHAVMYAYYYLTAIKAWPSWIPPSIITVAQISQMMVGVGICVASFYYLYTDPEHCEVKPQNVYSGALMYGSYLYLFCDFFVRRFLRGGK 299
BLAST of NO12G02790 vs. NCBI_GenBank
Match: ACV21066.1 (fatty acid elongase [Nannochloropsis oculata]) HSP 1 Score: 239.2 bits (609), Expect = 2.000e-59 Identity = 128/286 (44.76%), Postives = 170/286 (59.44%), Query Frame = 0 Query: 19 PSTLIPVTRELAGNTYTFLQFWQLFPWTKPFYTPFEKNFDVRPWFMFVHGNW-WLPVVAIALYGVMIVTLPKYTAKKPV-KCDVALAYWNFFLAVFSTLGAIRIVPHLLWFSATHTFKDTVCTPPQMMNGDGASGLWCLLFTLSKVIELLDTLFVCLKGRTPIFLHWYHHVTVLSFTWTAYA-ARHPGVYFIAMNYTVHAVMYSYYFLMAINAKPKWLNPMYITFLQISQMVAGVVITLCGFHYIARDPSTCGVVPHVLYFQGLIYGSYLYLFLEFLIKRFFSSSK 302 PS ++P + + F Q +Q +P P YT +EKNF + F W LP+ +Y +MI+ K +P + ALA WN L++FS G IR VPHLL AT FKDT+C P G+GA G+W +LF SKV EL+DT+F+ + FLHWYHH+TVL F W +YA G+YF+AMNY+VHA+MY+YY+L AINA PKW+ P IT QISQM+ GV I F+++ DP C V +Y L+YGSYLYLF +F ++RF K Sbjct: 18 PSKIVPY--KSIPDKVPFTQLFQHYPVLDPLYTQYEKNFYASTYVKFAQDTWPVLPLALCGMYALMIIVGTKVMVSRPKHEWKTALACWNLMLSIFSFCGMIRTVPHLLHNVATLPFKDTICRHPAETYGEGACGMWVMLFIFSKVPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYAVTSSTGLYFVAMNYSVHAIMYAYYYLTAINAWPKWIPPSIITVAQISQMIVGVGICASSFYFLYTDPEHCQVKRQNVYAGALMYGSYLYLFCDFFVRRFLRGGK 301
BLAST of NO12G02790 vs. NCBI_GenBank
Match: EWM29442.1 (fatty-acyl [Nannochloropsis gaditana]) HSP 1 Score: 239.2 bits (609), Expect = 2.000e-59 Identity = 137/300 (45.67%), Postives = 174/300 (58.00%), Query Frame = 0 Query: 36 FLQFWQLFPWTKPFYTPFEKNFDVRPWFMFVHGNW-WLPVVAIALYGVMIVTLPKYTAKKPV-KCDVALAYWNFFLAVFSTLGAIRIVPHLLWFSATHTFKDTVCTPPQMMNGDGASGLWCLLFTLSKVIELLDTLFVCLKGRTPIFLHWYHHVTVLSFTWTAYA-ARHPGVYFIAMNYTVHAVMYSYYFLMAINAKPKWLNPMYITFLQISQMVAGVVITLCGFHYIARDPSTCGVVPHVLYFQGLIYGSYLYLFLEFLIKRFFSSSKKGSSSLVSSLPPSRSAVASNGAMAKGIGNGG 333 F Q +Q +P PFYT +EKNF + F W LP+ +YG+MIV K +P + ALA WN L+VFS G +R VPHLL T FKDT+C P G+GA GLW +LF SKV EL+DT+F+ + FLHWYHH+TVL F W +YA G+YF+AMNY+VHAVMY+YY+L AI A P W+ P IT QISQM+ GV I + F+Y+ DP C V P +Y L+YGSYLYLF +F ++RF K L RSAV + K I + G Sbjct: 31 FTQLFQHYPVLSPFYTEYEKNFHASSYVNFAQNTWPALPLALCGIYGLMIVVGTKVMESRPKHEWKTALACWNLLLSVFSFCGMLRTVPHLLHNVTTLPFKDTICRHPAETYGEGACGLWVMLFIYSKVPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYAVTSSTGLYFVAMNYSVHAVMYAYYYLTAIKAWPSWIPPSIITVAQISQMMVGVGICVASFYYLYTDPEHCEVKPQNVYSGALMYGSYLYLFCDFFVRRFLRGGK-------PRLGEERSAVLTMTKKIKDIHDFG 323
BLAST of NO12G02790 vs. NCBI_GenBank
Match: EWM28304.1 (fatty-acyl [Nannochloropsis gaditana]) HSP 1 Score: 228.0 bits (580), Expect = 4.700e-56 Identity = 119/271 (43.91%), Postives = 163/271 (60.15%), Query Frame = 0 Query: 35 TFLQFWQLFPWTKPFYTPFEKNFDVRPWFMFVHGNWWLPVVAIALYGVMIV---TLPKYTAKKPVKCDVALAYWNFFLAVFSTLGAIRIVPHLLWFSATHTFKDTVCTPPQMMNGDGASGLWCLLFTLSKVIELLDTLFVCLKGRTPIFLHWYHHVTVLSFTWTAYAARHPGVYFIAMNYTVHAVMYSYYFLMAINAKPKWLNPMYITFLQISQMVAGVVITLCGFHYIARDPSTCGVVPHVLYFQGLIYGSYLYLFLEFLIKRFFSSSKK 303 TF Q +Q+ P +PFY +EK +D P + ++ W+P+ + LY V I L K +KP LAYWN L++FS +G +R+VPHL++ +AT C P+ + G+ A G W F LSK+ EL+DT F+ L+ + FLHWYHHVTVL FTW Y +PG+ F+AMNY+VHA+MY YYFLMA+ +P WL P +IT +QISQMV GV T + R C V +L G++Y +YLYLF EF ++RF KK Sbjct: 40 TFTQLFQVIPAIEPFYMEWEKKYDSSPVYEWMKSVPWVPIAGVILYVVGIFGGQALMK--NRKPFDLKWPLAYWNLALSLFSIMGMVRVVPHLIYLTATKGLGVVACGAPEPLYGNAAVGFWVQAFILSKLAELIDTAFIVLRKKPLQFLHWYHHVTVLLFTWFCYTHENPGIIFVAMNYSVHAIMYGYYFLMAVRVRPSWLKPQFITLMQISQMVVGVA-TAAFYIMKIRAGEECAVDQDLLVACGVMYSTYLYLFCEFAVRRFILGPKK 307
BLAST of NO12G02790 vs. NCBI_GenBank
Match: OEU18932.1 (GNS1/SUR4 membrane protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 219.5 bits (558), Expect = 1.700e-53 Identity = 123/279 (44.09%), Postives = 169/279 (60.57%), Query Frame = 0 Query: 31 GNTYTFLQFWQLFPWTKPFYTPFEKNFDVRPWFMFVHGNWWLPVVAIALYGVMIVTLPKYTA--KKPVKCDVALAYWNFFLAVFSTLGAIRIVPHLLWFSATHTFKDTVCTPPQ---MMNGDGASGLWCLLFTLSKVIELLDTLFVCLKGRTPIFLHWYHHVTVLSFTWTAYAARHP-GVYFIAMNYTVHAVMYSYYFLMAINAKPKWLNPMYITFLQISQMVAGVVITLCGFHYIARDPSTCGVVPHVLYFQGLIYGSYLYLFLEFLIKRFFSSSKKG 304 G + +F +P +PFY FEKN+D P ++ + +PV A+ LYGV+I T+ +Y ++P +A+WN L+VFS +G R +P LL + +D +C + G G+SGLW LLF LSK EL+DT F+ + + IFLHWYHH+TVL + W +Y P G++F MNY+VHA MY YYFLMA+ +PKW NP+ IT QISQMV GV +TL GF+Y DP TCG+ ++YGSYL+LFL+F R+F KKG Sbjct: 14 GAGIAYREFSCEYPQLEPFYFEFEKNYDPIPLLEWMRYHSMIPVYAVILYGVLI-TVGQYAMRNREPFNLRRLMAFWNLALSVFSWIGMFRTLPQLLHNLYHLSMRDNLCMDSRETIASYGSGSSGLWFLLFVLSKFPELIDTFFIVIHKKPLIFLHWYHHITVLLYCWHSYVTTSPLGIFFSVMNYSVHASMYGYYFLMAMKMRPKWFNPIIITIFQISQMVVGVSVTLAGFYYYKTDP-TCGIQNENNTAAFVMYGSYLFLFLQFFFGRYF--KKKG 288
BLAST of NO12G02790 vs. NCBI_GenBank
Match: XP_002184740.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC43799.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 217.6 bits (553), Expect = 6.300e-53 Identity = 110/238 (46.22%), Postives = 157/238 (65.97%), Query Frame = 0 Query: 72 LPVVAIALYGVMIVTLPKY-TAKKPVKCDVALAYWNFFLAVFSTLGAIRIVPHLLWFSATHTFKDTVCTPPQMMNGDGASGLWCLLFTLSKVIELLDTLFVCLKGRTPIFLHWYHHVTVLSFTWTAYAARH-PGVYFIAMNYTVHAVMYSYYFLMAINAKPKWLNPMYITFLQISQMVAGVVITLCGFHYIAR--DPSTCGVVPHVLYFQGLIYGSYLYLFLEFLIKRFFSSSKKGSS 306 +P+ A LYG+++V Y ++P++ +LA WN FLA+FS +G +R P L+ AT T ++ +C PQ G G++GLW LF LSK EL+DT+F+ + + IFLHWYHH+TVL + W +Y + PG++F+ MNYTVHA MY YYFLMAI A+P+WLNPM +T +QISQMV GV +TL GF+Y AR D +C + ++YGSYL+LFL+F + R+ + +S Sbjct: 7 VPIGACLLYGLLMVAGQAYFRTREPLRARTSLAAWNLFLALFSLVGMLRTFPQLVHNLATLTLRENLCANPQATYGSGSTGLWVQLFILSKFPELIDTVFIIVNKKKLIFLHWYHHITVLLYCWHSYVTKSPPGIFFVVMNYTVHASMYGYYFLMAIRARPRWLNPMIVTTMQISQMVVGVAVTLLGFYYSARAADHQSCRIKRENNTAAFVMYGSYLFLFLQFFVGRYVGTQSPVAS 244 The following BLAST results are available for this feature:
BLAST of NO12G02790 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO12G02790 ID=NO12G02790|Name=NO12G02790|organism=Nannochloropsis oceanica|type=gene|length=2944bpback to top protein sequence of NO12G02790.1 >NO12G02790.1-protein ID=NO12G02790.1-protein|Name=NO12G02790.1|organism=Nannochloropsis oceanica|type=polypeptide|length=368bpback to top Synonyms
Publications
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