NO12G02780, NO12G02780 (gene) Nannochloropsis oceanica

Overview
NameNO12G02780
Unique NameNO12G02780
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length5076
Alignment locationchr12:773581..778656 +

Link to JBrowse

Properties
Property NameValue
DescriptionProtein of unknown function DUF106, transmembrane
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr12genomechr12:773581..778656 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR008568UCP010045_TM_euk
IPR002809DUF106_TM
Homology
BLAST of NO12G02780 vs. NCBI_GenBank
Match: EWM25752.1 (Protein of unknown function DUF106, transmembrane [Nannochloropsis gaditana])

HSP 1 Score: 468.0 bits (1203), Expect = 2.200e-128
Identity = 231/275 (84.00%), Postives = 249/275 (90.55%), Query Frame = 0
Query:    1 MHAPTLGHSSQDLLLDPAIRNWGVLPILVFVMCINLLRAYLTHLGKSNKAPELDDLRRRQTLARADRLRTKGNFIHQQGFNARKAWFVDKEKGEGVLLEEGVPGAVNPMSNPMGMMEMVKGQAYFGMTQMGMMQFSEMFFSGFVLVKIPFALTASFKGMLQRGIELSTLDASYVSATSWMFLVAFGVKDLQRLFTFDEESLQEEARVYGQQLGGVPVGGGPPAPMGFDCAKMFMAAKEGLEVVRHRFELEEVEKRLLGDRYPAMLSATERFLSLE 276
            M  PTLGHSS+DLLLDPAIRNWGVLPILVFV+CINLLRAYLTHLGK NK PE+DDLRRRQ LARADRLR  GN IH+ GF ARKAWFV K++ EG L EEGVPGAVNPMSNPMGMMEMVKGQAYFGMTQMGMMQFSEMFF+GFVLVKIPFALTASFKGMLQRGIELSTLDASYVSATSWMFLVAFGVKDLQRLF+FD+  ++EEARVY  Q GGVP+GGGPPAPMGFDCAKM+ AAK GL++ RHRF LE+VEKRLLGDRYP  LSATE FL++E
Sbjct:    1 MQPPTLGHSSRDLLLDPAIRNWGVLPILVFVLCINLLRAYLTHLGKGNKPPEIDDLRRRQVLARADRLRANGNNIHKAGFEARKAWFVGKDEQEGALSEEGVPGAVNPMSNPMGMMEMVKGQAYFGMTQMGMMQFSEMFFAGFVLVKIPFALTASFKGMLQRGIELSTLDASYVSATSWMFLVAFGVKDLQRLFSFDDGPMKEEARVYALQAGGVPLGGGPPAPMGFDCAKMYSAAKGGLDMTRHRFALEDVEKRLLGDRYPTSLSATETFLTME 275          
BLAST of NO12G02780 vs. NCBI_GenBank
Match: CBJ26965.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 213.8 bits (543), Expect = 7.600e-52
Identity = 129/292 (44.18%), Postives = 179/292 (61.30%), Query Frame = 0
Query:   11 QDLLLDPAIRNWGVLPILVFVMCINLLRAYLTHLGKSNKAPELDDLRRRQTLARADRLRTKGNFIHQQGFNARKAWFVDKEKGEGVLLEEGVPGAVNPMSNPMGMMEMVKGQAYFGMTQMGMMQFSEMFFSGFVLVKIPFALTASFKGMLQRGIELSTLDASYVSATSWMFLVAFGVKDLQRLFTFDEESLQEEARVYGQQLGGVPVGGGPPAPMGFDCAKMFMAAKEGLEVVRHRFELEEVEKRLLGDRYPAMLSATERFLSLEEEARKMLRKGDEKAGLGKRPSKSTLKK 303
            + L+LDPAIR+W V P+++ V+ + +LR  +T L K++K  + ++L  +QTL RA RLR  G FI ++ F+ RK +F  KE   G+L +E +PG  NPM+NP  MM  +K Q  F  T M MM F+  FF GFVLV++PF LT  FK MLQRG++LSTLDASYVS+TSW FLV FG+K +  LF   E  +Q EA+V   QLG   VG    A MGFD  K++ +  + L++  H + L +VEKRLLG +YP   ++      + +++  M    D      K P  S  KK
Sbjct:    4 EHLVLDPAIRDWVVFPLMLMVILVGVLRHNITALLKADKPLDKEELSYKQTLTRAKRLRGNGRFICREAFSRRKGYFTAKE--GGLLRQEDLPGQANPMANPDKMMGPMKSQMGFVGTNMFMMAFTSYFFEGFVLVRVPFPLTNRFKVMLQRGVQLSTLDASYVSSTSWYFLVMFGLKSVINLF-LRETPVQHEAKVIQSQLG---VGA---ASMGFDTKKVYASEADSLDLAPHEWLLNDVEKRLLGSKYPT--TSVYDLAGMHDDSAAMFGANDGGRAAQKTPKGSGGKK 284          
BLAST of NO12G02780 vs. NCBI_GenBank
Match: XP_009513937.1 (hypothetical protein PHYSODRAFT_474109, partial [Phytophthora sojae] >EGZ26662.1 hypothetical protein PHYSODRAFT_474109, partial [Phytophthora sojae])

HSP 1 Score: 175.3 bits (443), Expect = 3.000e-40
Identity = 103/258 (39.92%), Postives = 147/258 (56.98%), Query Frame = 0
Query:    8 HSSQDLLLDPAIRNWGVLPILVFVMCINLLRAYLTHLGKSNKAPELDDLRRRQTLARADRLRTKGNFIHQQGFNARKAWFVDKEKGEGV---LLEEGVPGAVNPMSNPMGMMEMVKGQAYFGMTQMGMMQFSEMFFSGFVLVKIPFALTASFKGMLQRGIELSTLDASYVSATSWMFLVAFGVKDLQRLFTFDEESLQEEARVYGQQLGGVPVGGGPPAPMGFDCAKMFMAAKEGLEVVRHRFELEEVEKRLLGDRYP 263
            HS  +++LDP+IR+W VLP+++   C  ++R Y+T L KS K   ++ L    T+ RA   R    FI    F  RK +F   +K +G+   L E+    A+N M NP  M+EM+KG   F ++   MM     FF GFVL K+PF+LT  FK MLQRGIEL+TLD SYVS+ SW FLV+FG++    L    E+S  ++ +    Q+G   +  GP   M FD  K++   +  L +  H + LE  EK+LLG+  P
Sbjct:    2 HSMVEIILDPSIRDWVVLPMVIIFGCSAMVRHYVTLLLKSEKMASVEQLMPMNTVKRAQITRINSKFITPDAFAMRKHYFTASQKKDGMKGALREKVKSEAMNQMMNPNSMLEMMKGNMTFMVSNFVMMGLMSYFFGGFVLAKVPFSLTQKFKMMLQRGIELNTLDVSYVSSVSWYFLVSFGMRGFLSLI-LGEQSASDDTKAMQMQMG---MNAGP--NMAFDAPKVYKQERVSLRLHNHDWALEFAEKKLLGEPIP 253          
BLAST of NO12G02780 vs. NCBI_GenBank
Match: OWZ15659.1 (hypothetical protein PHMEG_00010662 [Phytophthora megakarya])

HSP 1 Score: 174.9 bits (442), Expect = 3.900e-40
Identity = 103/260 (39.62%), Postives = 148/260 (56.92%), Query Frame = 0
Query:    9 SSQDLLLDPAIRNWGVLPILVFVMCINLLRAYLTHLGKSNKAPELDDLRRRQTLARADRLRTKGNFIHQQGFNARKAWFVDKEKGEGV---LLEEGVPGAVNPMSNPMGMMEMVKGQAYFGMTQMGMMQFSEMFFSGFVLVKIPFALTASFKGMLQRGIELSTLDASYVSATSWMFLVAFGVKDLQRLFTFDEESLQEEARVYGQQLGGVPVGGGPPAPMGFDCAKMFMAAKEGLEVVRHRFELEEVEKRLLGDRYPAML 266
            S  +++LDP+IR+W VLP+++   C  ++R Y+T L KS K   ++ L+   T+ RA   R    FI    F  RK +F   +K +G+   L E+    A+N M NP  M+EM+KG   F ++   MM     FF GFVL K+PF+LT  FK MLQRGIEL+TLD SYVS+ SW FLV+FG++    L    E+S  ++ +    Q+G   +G  P   M FD  K++   +  L +  H + LE  EK+LLG+  P  L
Sbjct:   19 SMVEIILDPSIRDWVVLPMVIIFGCSAMVRHYVTLLLKSEKMATVEQLKPMNTVKRAQITRVNSKFITPDAFAVRKHYFTASQKKDGMKGALREKVKSEAMNQMMNPNSMLEMMKGNMTFMVSNFVMMGLMSYFFGGFVLAKVPFSLTQKFKMMLQRGIELNTLDVSYVSSVSWYFLVSFGMRGFLSLI-LGEQSASDDTKAMQMQMG---MGAAP--NMAFDAPKVYKQERVSLRLHNHDWALEFAEKKLLGETIPEKL 272          
BLAST of NO12G02780 vs. NCBI_GenBank
Match: ETP45494.1 (hypothetical protein F442_08105 [Phytophthora parasitica P10297])

HSP 1 Score: 174.1 bits (440), Expect = 6.600e-40
Identity = 101/254 (39.76%), Postives = 147/254 (57.87%), Query Frame = 0
Query:   12 DLLLDPAIRNWGVLPILVFVMCINLLRAYLTHLGKSNKAPELDDLRRRQTLARADRLRTKGNFIHQQGFNARKAWFVDKEKGEGV---LLEEGVPGAVNPMSNPMGMMEMVKGQAYFGMTQMGMMQFSEMFFSGFVLVKIPFALTASFKGMLQRGIELSTLDASYVSATSWMFLVAFGVKDLQRLFTFDEESLQEEARVYGQQLGGVPVGGGPPAPMGFDCAKMFMAAKEGLEVVRHRFELEEVEKRLLGDRYP 263
            +++LDP+IR+W VLP+++   C  ++R Y+T L K+ K   ++ L    T+ RA   R    FI    F  R+ +F   +K +G+   L E+    A+N M NP  M+EM+KG   F ++   MM     FF GFVL K+PF+LT  FK MLQRGIEL+TLD SYVS+ SW FLV+FG++    L   DE+S  ++ +    Q+G   +G GP   M FD  K++   +  L +  H + LE  EK+LLG+  P
Sbjct:    3 EIILDPSIRDWVVLPMVIIFGCSAMVRHYVTLLLKNEKMASVEQLTPMNTVKRAQITRVNSKFISPDAFAMRRHYFTASQKKDGLKGALREKVKSEAMNQMMNPNSMLEMMKGNMTFMVSNFVMMGLMSYFFGGFVLAKVPFSLTQKFKMMLQRGIELNTLDVSYVSSVSWYFLVSFGMRGFLSLI-LDEKSASDDTKAMQMQMG---MGAGP--NMAFDAPKVYKQERVSLRLHNHDWALEFAEKKLLGEPIP 250          
BLAST of NO12G02780 vs. NCBI_GenBank
Match: GBG32987.1 (ER membrane protein complex subunit 3 [Aurantiochytrium sp. FCC1311])

HSP 1 Score: 173.7 bits (439), Expect = 8.700e-40
Identity = 99/246 (40.24%), Postives = 148/246 (60.16%), Query Frame = 0
Query:   12 DLLLDPAIRNWGVLPILVFVMCINLLRAYLTHLGKSNKAPELDDLRRRQTLARADRLRTKGNFIHQQGFNARKAWFVDKEKGEGVLLEEGVPGAVNPMSNPMGMMEMVKGQAYFGMTQMGMMQFSEMFFSGFVLVKIPFALTASFKGMLQRGIELSTLDASYVSATSWMFLVAFGVKDLQRLFTFDEESLQEEARVYGQQLGGVPVGGGPPAPMGFDCAKMFMAAKEGLEVVRHRFELEEVEKRLL 258
            DL+LDP IRNW ++PIL+ ++ + + R++   L K +  PE    ++ Q L RA RLR     +  +GF+ R+ + V+  KG G L ++    A NPM NP GMM M+KG     +  + MM F   FF GFV+VK+PF LT  FK MLQR I L TLD SYVS+ SW FL  FG++    L    ++++ ++A++  QQ+G   +GGG   PM FD  K +   +EG++ ++H+F L E+E+  +
Sbjct:    4 DLMLDPKIRNWVLIPILIIMLLVQMSRSWAQVLLKGSTPPEPGQFKQMQLLQRATRLRANNRLLSSRGFHMRRHFLVEL-KGIG-LRQKFEGSAPNPMQNPDGMMNMMKGNMTMMVPNIAMMTFISFFFQGFVMVKVPFMLTEGFKQMLQRDISLQTLDTSYVSSLSWYFLALFGLRGFFSL-VLGDQAVTDDAKIMQQQMG---MGGG--NPMQFDANKSYKQMREGVKHIQHQFFLGELEEEFM 241          
BLAST of NO12G02780 vs. NCBI_GenBank
Match: CCA17543.1 (conserved hypothetical protein [Albugo laibachii Nc14])

HSP 1 Score: 172.9 bits (437), Expect = 1.500e-39
Identity = 106/276 (38.41%), Postives = 150/276 (54.35%), Query Frame = 0
Query:   12 DLLLDPAIRNWGVLPILVFVMCINLLRAYLTHLGKSNKAPELDDLRRRQTLARADRLRTKGNFIHQQGFNARKAWFVDKEKG---EGVLLEEGVPGAVNPMSNPMGMMEMVKGQAYFGMTQMGMMQFSEMFFSGFVLVKIPFALTASFKGMLQRGIELSTLDASYVSATSWMFLVAFGVKDLQRLFTFDEESLQEEARVYGQQLGGVPVGGGPPAPMGFDCAKMFMAAKEGLEVVRHRFELEEVEKRLLGDRYPAMLSATERFLSLEEEARKMLRK 285
            +++LDP+IR+W V P+L+  +C  +LR Y+T L KS+     D+LR   T+ RA   R    FIH   +  RK +F+  EK    +GVL E+    ++N M NP  M+EM+KG   F ++   MM     FF GFVL K+PF+LT  FK MLQRGIEL+TLD SYVS+ SW FLV FG++    L    E+S  ++ +                  MGFD  K +   +  L +  H + LE  E+ LLG+  P  ++ATE      ++A    RK
Sbjct:    3 EIILDPSIRDWVVFPMLIIFVCSAMLRHYVTLLLKSDTIANADELRPINTIKRAQITRMNSKFIHPDAYAMRKHYFIASEKKHGMKGVLREKVKNESMNQMMNPNSMLEMMKGNMTFMVSNFVMMGLMSYFFGGFVLAKVPFSLTQKFKMMLQRGIELNTLDVSYVSSVSWYFLVMFGIRGFLSLI-LGEQSASDDTKAM-----XXXXXXXXXXXMGFDAPKAYKQERVNLRLQVHEWALEHAERILLGETIP--ITATETNAMTHQDATPTTRK 270          
BLAST of NO12G02780 vs. NCBI_GenBank
Match: POM65957.1 (Transmembrane protein [Phytophthora palmivora var. palmivora])

HSP 1 Score: 172.9 bits (437), Expect = 1.500e-39
Identity = 101/254 (39.76%), Postives = 146/254 (57.48%), Query Frame = 0
Query:   12 DLLLDPAIRNWGVLPILVFVMCINLLRAYLTHLGKSNKAPELDDLRRRQTLARADRLRTKGNFIHQQGFNARKAWFVDKEKGEGV---LLEEGVPGAVNPMSNPMGMMEMVKGQAYFGMTQMGMMQFSEMFFSGFVLVKIPFALTASFKGMLQRGIELSTLDASYVSATSWMFLVAFGVKDLQRLFTFDEESLQEEARVYGQQLGGVPVGGGPPAPMGFDCAKMFMAAKEGLEVVRHRFELEEVEKRLLGDRYP 263
            +++LDP+IR+W VLP+++   C  ++R Y+T L KS K   ++ L    T+ RA   R    FI    F  R+ +F   +K +G+   L E+    A+N M NP  M+EM+KG   F ++   MM     FF GFVL K+PF+LT  FK MLQRGIEL+TLD SYVS+ SW FLV+FG++    L    E+S  ++ +    Q+G   +G GP   M FD  K++   +  L +  H + LE  EK+LLG+  P
Sbjct:    3 EIILDPSIRDWVVLPMVIIFGCSAMVRHYVTLLLKSEKMASVEQLMPMNTVKRAQITRVNSKFITPDAFAMRRHYFTASQKKDGMKGALREKVKSEAMNQMMNPNSMLEMMKGNMTFMVSNFVMMGLMSYFFGGFVLAKVPFSLTQKFKMMLQRGIELNTLDVSYVSSVSWYFLVSFGMRGFLSLI-LGEQSASDDTKAMQMQMG---MGAGP--NMAFDAPKVYKQERVSLRLHNHDWALEFAEKKLLGESIP 250          
BLAST of NO12G02780 vs. NCBI_GenBank
Match: ETI47649.1 (hypothetical protein F443_08167 [Phytophthora parasitica P1569] >ETL94161.1 hypothetical protein L917_07813 [Phytophthora parasitica] >ETM47401.1 hypothetical protein L914_07878 [Phytophthora parasitica])

HSP 1 Score: 171.4 bits (433), Expect = 4.300e-39
Identity = 100/254 (39.37%), Postives = 146/254 (57.48%), Query Frame = 0
Query:   12 DLLLDPAIRNWGVLPILVFVMCINLLRAYLTHLGKSNKAPELDDLRRRQTLARADRLRTKGNFIHQQGFNARKAWFVDKEKGEGV---LLEEGVPGAVNPMSNPMGMMEMVKGQAYFGMTQMGMMQFSEMFFSGFVLVKIPFALTASFKGMLQRGIELSTLDASYVSATSWMFLVAFGVKDLQRLFTFDEESLQEEARVYGQQLGGVPVGGGPPAPMGFDCAKMFMAAKEGLEVVRHRFELEEVEKRLLGDRYP 263
            +++LDP+IR+W VLP+++   C  ++R Y+T L K+ K   ++ L    T+ RA   R    FI    F  R+ +F   +K +G+   L E+    A+N M NP  M+EM+KG   F ++   MM     FF GFVL K+PF+LT  FK MLQRGIEL+TLD SYVS+ SW FLV+FG++    L    E+S  ++ +    Q+G   +G GP   M FD  K++   +  L +  H + LE  EK+LLG+  P
Sbjct:    3 EIILDPSIRDWVVLPMVIIFGCSAMVRHYVTLLLKNEKMASVEQLTPMNTVKRAQITRVNSKFISPDAFAMRRHYFTASQKKDGLKGALREKVKSEAMNQMMNPNSMLEMMKGNMTFMVSNFVMMGLMSYFFGGFVLAKVPFSLTQKFKMMLQRGIELNTLDVSYVSSVSWYFLVSFGMRGFLSLI-LGEKSASDDTKAMQMQMG---MGAGP--NMAFDAPKVYKQERVSLRLHNHDWALEFAEKKLLGEPIP 250          
BLAST of NO12G02780 vs. NCBI_GenBank
Match: ETK87585.1 (hypothetical protein L915_07991 [Phytophthora parasitica] >ETL41033.1 hypothetical protein L916_07914 [Phytophthora parasitica])

HSP 1 Score: 171.4 bits (433), Expect = 4.300e-39
Identity = 100/254 (39.37%), Postives = 146/254 (57.48%), Query Frame = 0
Query:   12 DLLLDPAIRNWGVLPILVFVMCINLLRAYLTHLGKSNKAPELDDLRRRQTLARADRLRTKGNFIHQQGFNARKAWFVDKEKGEGV---LLEEGVPGAVNPMSNPMGMMEMVKGQAYFGMTQMGMMQFSEMFFSGFVLVKIPFALTASFKGMLQRGIELSTLDASYVSATSWMFLVAFGVKDLQRLFTFDEESLQEEARVYGQQLGGVPVGGGPPAPMGFDCAKMFMAAKEGLEVVRHRFELEEVEKRLLGDRYP 263
            +++LDP+IR+W VLP+++   C  ++R Y+T L K+ K   ++ L    T+ RA   R    FI    F  R+ +F   +K +G+   L E+    A+N M NP  M+EM+KG   F ++   MM     FF GFVL K+PF+LT  FK MLQRGIEL+TLD SYVS+ SW FLV+FG++    L    E+S  ++ +    Q+G   +G GP   M FD  K++   +  L +  H + LE  EK+LLG+  P
Sbjct:    3 EIILDPSIRDWVVLPMVIIFGCSAMVRHYVTLLLKNEKMASVEQLTPMNTVKRAQITRVNSKFISPDAFAMRRHYFTASQKKDGLKGALREKVKSEAMNQMMNPNSMLEMMKGNMTFMVSNFVMMGLMSYFFGGFVLAKVPFSLTQKFKMMLQRGIELNTLDVSYVSSVSWYFLVSFGMRGFLSLI-LGEKSASDDTKAMQMQMG---MGAGP--NMAFDAPKVYKQERVSLRLHNHDWALEFAEKKLLGEPIP 250          
The following BLAST results are available for this feature:
BLAST of NO12G02780 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM25752.12.200e-12884.00Protein of unknown function DUF106, transmembrane ... [more]
CBJ26965.17.600e-5244.18conserved unknown protein [Ectocarpus siliculosus][more]
XP_009513937.13.000e-4039.92hypothetical protein PHYSODRAFT_474109, partial [P... [more]
OWZ15659.13.900e-4039.62hypothetical protein PHMEG_00010662 [Phytophthora ... [more]
ETP45494.16.600e-4039.76hypothetical protein F442_08105 [Phytophthora para... [more]
GBG32987.18.700e-4040.24ER membrane protein complex subunit 3 [Aurantiochy... [more]
CCA17543.11.500e-3938.41conserved hypothetical protein [Albugo laibachii N... [more]
POM65957.11.500e-3939.76Transmembrane protein [Phytophthora palmivora var.... [more]
ETI47649.14.300e-3939.37hypothetical protein F443_08167 [Phytophthora para... [more]
ETK87585.14.300e-3939.37hypothetical protein L915_07991 [Phytophthora para... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL127nonsL127Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL125nonsL125Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL124nonsL124Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR015ncniR015Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR014ncniR014Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR009ngnoR009Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR007ngnoR007Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR006ngnoR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010228NSK010228Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO12G02780.1NO12G02780.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|631068gene_5448Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100162g7gene4762Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO12G02780.1NO12G02780.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO12G02780 ID=NO12G02780|Name=NO12G02780|organism=Nannochloropsis oceanica|type=gene|length=5076bp
TTTTCACAAAGTCATGCACTGTTTGTTCTTTAGTGCTGTTGTCGGACTAT
CAACGTCTTTTTCGCACACTATTGGTGCCTCCTCCCACACACGCACGCAG
TCACACATTTTAAAATTGTTCCATTCCCTTTTCCCCATCAAAATTGTCTC
CCACTCTGACACATCTCACCTTCTCCCAGACACAGGAGGAGCCCCAGCCG
CCATAGATAGCATGGTACGTTCAAATCCCTTCCATCGCATAATTAAAAGC
CCATCTCTTATGGGCAAAAATGCCTGCTCCGTCCGCATGTCCGCGCGGAC
GTGCATGTTGAAATCATGCAACACCTTGGTCAACATCACCTGCCTTCTAC
TAAATCCTAGGGCCTCAAATTCTTCCACTGGCAACACCGCCTTCTCTCCG
CCCTTCCCAATCCGTCGTCCTAGCTCAGGCACCAACCCTTTCCACAACAC
ATTGTCCGCTATCATTATCCCCCCCCGGACAGAAGCTTGTGTTCCAACAC
AAAGTCATAGTACTCGATATATCTCTTTTTATCGCCATCTAAGAAAATCA
CATCAAAACTCGGTCTTCCCTTTCCTTCAGGCGTTGCCGCCAACCGCTGC
AGTAAATCCATGGCCGGCTCTCGGTGCATCTCAATTTCAGCAGCAGGAGC
AGTACCTGCAGCAGGAGTAGCAGCAGCCTCATCAAAATACTTTTTAGCAA
TCTGGGCCGCACGATGATCAATCTCACACGTTACTACCTTGGGGCGCAAA
CCCCCACTAGTATCAGCACCAACAGCGGCATCAGCACCAACAGCGGCAGC
AGTAACAGTAGCAGCGCCTGCCAAACCCTCAGCCATGCACAAGGTAGCAT
ACCCTGTAAATGTGCCAATCTCCAACGCGGATCTCGCGCCGATCGCTTTC
GTCAACGTCGCCAATAGTCTCCCCTGACTATGCCCGGACAACATGTGTGC
TCCTTCCGGAAACACGCCCTCTGTCTCCTGCGACAAGCGTTGAAGCAAAT
CGGACTCAAGCAACGTCCCTGCTTCAGCTTCCATAAAGGCATCCATGGCC
ACGTCAAAGCCTCTATTTAAACGAACATTCTGGAAGGGCCCCGGCTGGAG
CCAAACCCTCTTATGGGACCTTCGCTTCCCCTCCGACAGAGGTAGAAGCG
GGCAAGCTTCTTCGACGCCGGGAGGGTAAACACTGCGGGGAGGGGCGGGA
TAGCCGCCTTTGGGGGGTTGATGCTCGAGGTCTTGCAAAGCTTGGATGCA
CCCACGGGAGCAGCATTGCTGGTGCGATGCGCTGCAAGAGGAGCATTGGA
GGAAACGCACATGGCAATTGGGGTTGGCGCAATTCACGTAGTTGTCCGAA
GGGGTGCCACATTGGTCGCATCGTGCGAGAACATCTTCCGTTATCCTCTC
CCCGAGTCGATTATCAAATACATAGTTAATCCCCTTGAACTTACTTCCAG
GAATCACCCCTCCCACCGCTACCGCTGCCGTTTTGACAGTTGATGTAGTT
TGTGAAGCCGGATCAACAACTTGCTCCCCCCGTAAGTGCCTGGCATACGA
GACAATCCCTCCTTCTAACCTCGCGACGTTTTCAAACCCTAGCTCCTGCT
TCAGGTAGGCCCCCACTTTAATACACCGAATTCCCCCCGTGCAGTACGTC
AGAATCTCTGTCTCCTTCGGCACGTCTTCTAATCTCCTTTTTAAGACGTC
CCAAGACTCCCGGAAGAAACTCGTGTTCAACGGCTCCGCTGACACAAATC
GCCCGACCTCCGACTCAAATTCATTTCTACAGTCGAGGACCAGCACCTTG
GGGTCATCCACCTTCTCGTGCCACTCACTCGGGCTCATCCCAACTCCACA
ATCCTGCCAATCAAATTCTTTTCCCTTTCTCCCCTCCCCCCTGTCTTCCT
CCATGCCTCCATCCGCCACCACCTGTTCGCGGACTCTGATATGCAGTGAA
TCAAAAGCTGGCTCCTCCATATACTCCTCCATCCTCACTTCCCTGTCCCT
ATTCAAAAAGACATTCTTTAACTCACTCAATGACGTGCAAGCCTCGGCAA
AATTCTGGAAAACGGTCGCCGGGACTGCCATTTGGGCATTGATTCCTTCA
CTCGCAACGTACACTCTCCCCAACGCCCCGAATGGCTCCCAGACCGCCCT
GAGCCTTTTCGCCAGTTGGGTTAAACCCAATTCATCGGCGATCGGCGGCG
TGAAAAAATTGTAGAAAGACACCATTTGCATCGCTTCGGCGAGCCTAGGG
TCGGGCATGTCGCGGAGGTAGGAGGGAACCATGGCGGCAGCGGCTGTCTT
GTCCGTTTTTATGTAAAGCTGTGGCATTTGGCCTTCTTTTTGAGCCTCCG
AAAAAGCTTGTTGAAGGTCCGCATCAGTCACCAAGGTGATGAACAAATCT
TCAGTTTCCTCACAGCTGATGTTGCTGCTACTCTCGCTGGTGTTGTTGCT
CTCATCATCTTTCTGTTGAACAGCAGCTTCGGTATTCACCTCTCCTCCCC
CTGCCCGAGTGGCAGTGCTTTCCCCCCTTCGGATCTTAACCACAATGTTG
TGCGGCATGCCCTCTACAGGAAATGCTTGATATATATAGCCCAGAAAGAC
ACTCAATTTACTCATTGCTTCCACCGGGATGAACAATCGAGTTTTCTTCT
CCCGCCTTGTCAGCCTCAAGGTCTGCCGTAAATCTACGTCGACCAAGACT
CTCACAGGCACCACCCGACTATCACTCAACTGCTGCAAAACCTCTTCCCC
TTTTTCCTTACTAAAACGTTCCCTCCGCTTGCTCAGCAACTTCTCGCGGA
CTTGGCTCCGAAGCAACGGGTCAACGTCTGGGGTACCAGCCGCGTCAAAT
GTCCGATAATATCCAGCCCGCGCGCTGTCAACCCCCGTCGAGCTGCTTCC
ACTTGGAACATTGCTTTTGGTGTGAATGTTTGTGCTGGTATCCGTGTTGG
TACTGGCGCTCATAGTCCAGAAAGGACGTTGCTGGTATTGGTTGCGGTGG
AAGGAGGAGGGGTAGAGCCATTTGCTGGTAGCGGAAGAGGGAGAAGGAAG
AGCGTGGTGGAAGTGGAAGGCGCGGACACATCCCATTAGACAGTAGAGAC
TGACACCGCGCATGAAAATACTTCCGTGTTGCTTTCTGTGTGGATTGCAG
AGATGGTGAATAGATCGTTGGTTTTGGCTATCTATTTGATTTACGGTAAA
GATGGGTAAATTCCTGCCAAGAAACAAGGCAAATTTAATGTGGCTGGACT
ACCAGTTGAAAGAGCAGGACGAAATATAGGTCTTAGATGAAAGTTACTCA
GAGAAACCTTTCATAATGCAGGACATACACTTACCTGTCCACCAAATGCA
TGGCGGCGATGTGGGGTGGGAAATGAAAGCTGGCTAGACAGAGGCTTTGA
GGAGAAAGCTGAAGCAGTGATCTACGACGACGATACACAGTTTTGGCAGA
TCCACACCGGGACGACGAGAGCATGCAGCCTTGCCCACTGTGCGACCGGT
GATGGGGTGTGCACGGATGCAGGCGAAGGAGGCAGGTTAACTTGATGTTC
GACCTGCGACTTTTATACGCAGTTCAGTGTTCAGCTGTGTGTGACCCGAG
GCAAGTTAGTGCGTGCGATCGAGAATTATGGGTAGCAGAAACAAGGTCTC
TACACTTATCTTCTTATTGTGGTCAAAATGGACAAGACAAACAGGTTTAC
CGGTAGAAAATAGCAGAAGCCATGGAGTAAATTACTCCCGGGCAGCGGCG
CTAAACCTGCCATTTTGCCATCGCCGTGCATCTCACGAGCAAGTCAACAC
ACCCACAAACTATCCCACCACGACGACGATGAGTTTAAGTAAGAGTTTTC
TTTTATCTCGGTCCCCTGACCCCCGAACGCACAGGCGCAACCCACCGAAA
CATTATTAAGACCCCTTTTCCCAGACCCCCCTCGCCAGAGAAGCAGCCTT
CTACGCCTCCCGGCTCCCATCCTTCACCACCACAATCCACGTCTAGAATG
CACGCCCCAACCCTAGGACACAGCAGTCAGGACCTGTTGCTGGATCCGGC
CATCCGCAACTGGGGCGTACTGCCCATCCTGGTCTTTGTGATGTGCATCA
ATCTCTTGCGGGCATACCTGACCCACTTAGGCAAGAGCAACAAGGCCCCC
GAGCTTGACGATTTAAGACGACGACAGACTTTGGCGCGTGCCGATAGGTT
ACGGACCAAAGGCAATTTCATCCATCAACAGGGTTTTAATGCGCGGAAGG
CTTGGTTTGTTGATAAGGAAAAGGGGGAGGGGGTCTTATTGGAGGAAGGA
GTACCGGGAGCGGTTAACCCCATGTCGAATCCGATGGGAATGATGGAGAT
GGTAAAGGGACAGGCGTACTTCGGCATGACTCAGATGGGAATGATGCAAT
TTTCTGAGATGTTTTTTTCTGGATTTGTCCTGGTGAAAATTCCGTTTGCT
CTGACGGCATCGTTCAAGGGGATGCTGCAACGAGGCATCGAATTGTCAAC
GCTGGACGCATCATATGTCAGTGCTACCTCGTGGATGTTCTTGGTGGCGT
TCGGCGTGAAGGATTTGCAACGTCTCTTTACCTTTGACGAGGAATCCTTG
CAAGAGGAAGCACGGGTGTACGGACAACAGCTGGGAGGCGTGCCTGTAGG
AGGAGGGCCCCCGGCACCGATGGGGTTTGATTGCGCGAAAATGTTCATGG
CGGCCAAAGAGGGACTGGAGGTGGTCCGGCATCGATTTGAACTAGAAGAG
GTCGAGAAACGCCTGCTGGGGGACCGATACCCGGCCATGTTGTCGGCGAC
AGgtatgtgagggagggagggagggagggagggaggggggaaagctgaca
tcgaagctctggcttgtcgtcgtgcattttctcatattcattcctcatgt
atgaaacacacagAACGATTCCTATCCTTGGAGGAAGAGGCGAGAAAGAT
GTTGAGGAAGGGAGACGAGAAGGCGGGCCTGGGGAAACGACCTTCCAAGT
CGACGCTGAAGAAAGAGTGACAGGTTCCCATCGATAAAATATCAAAAGAA
GCATAAGTTACACATAGGTGACCATA
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protein sequence of NO12G02780.1

>NO12G02780.1-protein ID=NO12G02780.1-protein|Name=NO12G02780.1|organism=Nannochloropsis oceanica|type=polypeptide|length=304bp
MHAPTLGHSSQDLLLDPAIRNWGVLPILVFVMCINLLRAYLTHLGKSNKA
PELDDLRRRQTLARADRLRTKGNFIHQQGFNARKAWFVDKEKGEGVLLEE
GVPGAVNPMSNPMGMMEMVKGQAYFGMTQMGMMQFSEMFFSGFVLVKIPF
ALTASFKGMLQRGIELSTLDASYVSATSWMFLVAFGVKDLQRLFTFDEES
LQEEARVYGQQLGGVPVGGGPPAPMGFDCAKMFMAAKEGLEVVRHRFELE
EVEKRLLGDRYPAMLSATERFLSLEEEARKMLRKGDEKAGLGKRPSKSTL
KKE*
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Synonyms
Publications