NO12G02780, NO12G02780 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO12G02780 vs. NCBI_GenBank
Match: EWM25752.1 (Protein of unknown function DUF106, transmembrane [Nannochloropsis gaditana]) HSP 1 Score: 468.0 bits (1203), Expect = 2.200e-128 Identity = 231/275 (84.00%), Postives = 249/275 (90.55%), Query Frame = 0 Query: 1 MHAPTLGHSSQDLLLDPAIRNWGVLPILVFVMCINLLRAYLTHLGKSNKAPELDDLRRRQTLARADRLRTKGNFIHQQGFNARKAWFVDKEKGEGVLLEEGVPGAVNPMSNPMGMMEMVKGQAYFGMTQMGMMQFSEMFFSGFVLVKIPFALTASFKGMLQRGIELSTLDASYVSATSWMFLVAFGVKDLQRLFTFDEESLQEEARVYGQQLGGVPVGGGPPAPMGFDCAKMFMAAKEGLEVVRHRFELEEVEKRLLGDRYPAMLSATERFLSLE 276 M PTLGHSS+DLLLDPAIRNWGVLPILVFV+CINLLRAYLTHLGK NK PE+DDLRRRQ LARADRLR GN IH+ GF ARKAWFV K++ EG L EEGVPGAVNPMSNPMGMMEMVKGQAYFGMTQMGMMQFSEMFF+GFVLVKIPFALTASFKGMLQRGIELSTLDASYVSATSWMFLVAFGVKDLQRLF+FD+ ++EEARVY Q GGVP+GGGPPAPMGFDCAKM+ AAK GL++ RHRF LE+VEKRLLGDRYP LSATE FL++E Sbjct: 1 MQPPTLGHSSRDLLLDPAIRNWGVLPILVFVLCINLLRAYLTHLGKGNKPPEIDDLRRRQVLARADRLRANGNNIHKAGFEARKAWFVGKDEQEGALSEEGVPGAVNPMSNPMGMMEMVKGQAYFGMTQMGMMQFSEMFFAGFVLVKIPFALTASFKGMLQRGIELSTLDASYVSATSWMFLVAFGVKDLQRLFSFDDGPMKEEARVYALQAGGVPLGGGPPAPMGFDCAKMYSAAKGGLDMTRHRFALEDVEKRLLGDRYPTSLSATETFLTME 275
BLAST of NO12G02780 vs. NCBI_GenBank
Match: CBJ26965.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 213.8 bits (543), Expect = 7.600e-52 Identity = 129/292 (44.18%), Postives = 179/292 (61.30%), Query Frame = 0 Query: 11 QDLLLDPAIRNWGVLPILVFVMCINLLRAYLTHLGKSNKAPELDDLRRRQTLARADRLRTKGNFIHQQGFNARKAWFVDKEKGEGVLLEEGVPGAVNPMSNPMGMMEMVKGQAYFGMTQMGMMQFSEMFFSGFVLVKIPFALTASFKGMLQRGIELSTLDASYVSATSWMFLVAFGVKDLQRLFTFDEESLQEEARVYGQQLGGVPVGGGPPAPMGFDCAKMFMAAKEGLEVVRHRFELEEVEKRLLGDRYPAMLSATERFLSLEEEARKMLRKGDEKAGLGKRPSKSTLKK 303 + L+LDPAIR+W V P+++ V+ + +LR +T L K++K + ++L +QTL RA RLR G FI ++ F+ RK +F KE G+L +E +PG NPM+NP MM +K Q F T M MM F+ FF GFVLV++PF LT FK MLQRG++LSTLDASYVS+TSW FLV FG+K + LF E +Q EA+V QLG VG A MGFD K++ + + L++ H + L +VEKRLLG +YP ++ + +++ M D K P S KK Sbjct: 4 EHLVLDPAIRDWVVFPLMLMVILVGVLRHNITALLKADKPLDKEELSYKQTLTRAKRLRGNGRFICREAFSRRKGYFTAKE--GGLLRQEDLPGQANPMANPDKMMGPMKSQMGFVGTNMFMMAFTSYFFEGFVLVRVPFPLTNRFKVMLQRGVQLSTLDASYVSSTSWYFLVMFGLKSVINLF-LRETPVQHEAKVIQSQLG---VGA---ASMGFDTKKVYASEADSLDLAPHEWLLNDVEKRLLGSKYPT--TSVYDLAGMHDDSAAMFGANDGGRAAQKTPKGSGGKK 284
BLAST of NO12G02780 vs. NCBI_GenBank
Match: XP_009513937.1 (hypothetical protein PHYSODRAFT_474109, partial [Phytophthora sojae] >EGZ26662.1 hypothetical protein PHYSODRAFT_474109, partial [Phytophthora sojae]) HSP 1 Score: 175.3 bits (443), Expect = 3.000e-40 Identity = 103/258 (39.92%), Postives = 147/258 (56.98%), Query Frame = 0 Query: 8 HSSQDLLLDPAIRNWGVLPILVFVMCINLLRAYLTHLGKSNKAPELDDLRRRQTLARADRLRTKGNFIHQQGFNARKAWFVDKEKGEGV---LLEEGVPGAVNPMSNPMGMMEMVKGQAYFGMTQMGMMQFSEMFFSGFVLVKIPFALTASFKGMLQRGIELSTLDASYVSATSWMFLVAFGVKDLQRLFTFDEESLQEEARVYGQQLGGVPVGGGPPAPMGFDCAKMFMAAKEGLEVVRHRFELEEVEKRLLGDRYP 263 HS +++LDP+IR+W VLP+++ C ++R Y+T L KS K ++ L T+ RA R FI F RK +F +K +G+ L E+ A+N M NP M+EM+KG F ++ MM FF GFVL K+PF+LT FK MLQRGIEL+TLD SYVS+ SW FLV+FG++ L E+S ++ + Q+G + GP M FD K++ + L + H + LE EK+LLG+ P Sbjct: 2 HSMVEIILDPSIRDWVVLPMVIIFGCSAMVRHYVTLLLKSEKMASVEQLMPMNTVKRAQITRINSKFITPDAFAMRKHYFTASQKKDGMKGALREKVKSEAMNQMMNPNSMLEMMKGNMTFMVSNFVMMGLMSYFFGGFVLAKVPFSLTQKFKMMLQRGIELNTLDVSYVSSVSWYFLVSFGMRGFLSLI-LGEQSASDDTKAMQMQMG---MNAGP--NMAFDAPKVYKQERVSLRLHNHDWALEFAEKKLLGEPIP 253
BLAST of NO12G02780 vs. NCBI_GenBank
Match: OWZ15659.1 (hypothetical protein PHMEG_00010662 [Phytophthora megakarya]) HSP 1 Score: 174.9 bits (442), Expect = 3.900e-40 Identity = 103/260 (39.62%), Postives = 148/260 (56.92%), Query Frame = 0 Query: 9 SSQDLLLDPAIRNWGVLPILVFVMCINLLRAYLTHLGKSNKAPELDDLRRRQTLARADRLRTKGNFIHQQGFNARKAWFVDKEKGEGV---LLEEGVPGAVNPMSNPMGMMEMVKGQAYFGMTQMGMMQFSEMFFSGFVLVKIPFALTASFKGMLQRGIELSTLDASYVSATSWMFLVAFGVKDLQRLFTFDEESLQEEARVYGQQLGGVPVGGGPPAPMGFDCAKMFMAAKEGLEVVRHRFELEEVEKRLLGDRYPAML 266 S +++LDP+IR+W VLP+++ C ++R Y+T L KS K ++ L+ T+ RA R FI F RK +F +K +G+ L E+ A+N M NP M+EM+KG F ++ MM FF GFVL K+PF+LT FK MLQRGIEL+TLD SYVS+ SW FLV+FG++ L E+S ++ + Q+G +G P M FD K++ + L + H + LE EK+LLG+ P L Sbjct: 19 SMVEIILDPSIRDWVVLPMVIIFGCSAMVRHYVTLLLKSEKMATVEQLKPMNTVKRAQITRVNSKFITPDAFAVRKHYFTASQKKDGMKGALREKVKSEAMNQMMNPNSMLEMMKGNMTFMVSNFVMMGLMSYFFGGFVLAKVPFSLTQKFKMMLQRGIELNTLDVSYVSSVSWYFLVSFGMRGFLSLI-LGEQSASDDTKAMQMQMG---MGAAP--NMAFDAPKVYKQERVSLRLHNHDWALEFAEKKLLGETIPEKL 272
BLAST of NO12G02780 vs. NCBI_GenBank
Match: ETP45494.1 (hypothetical protein F442_08105 [Phytophthora parasitica P10297]) HSP 1 Score: 174.1 bits (440), Expect = 6.600e-40 Identity = 101/254 (39.76%), Postives = 147/254 (57.87%), Query Frame = 0 Query: 12 DLLLDPAIRNWGVLPILVFVMCINLLRAYLTHLGKSNKAPELDDLRRRQTLARADRLRTKGNFIHQQGFNARKAWFVDKEKGEGV---LLEEGVPGAVNPMSNPMGMMEMVKGQAYFGMTQMGMMQFSEMFFSGFVLVKIPFALTASFKGMLQRGIELSTLDASYVSATSWMFLVAFGVKDLQRLFTFDEESLQEEARVYGQQLGGVPVGGGPPAPMGFDCAKMFMAAKEGLEVVRHRFELEEVEKRLLGDRYP 263 +++LDP+IR+W VLP+++ C ++R Y+T L K+ K ++ L T+ RA R FI F R+ +F +K +G+ L E+ A+N M NP M+EM+KG F ++ MM FF GFVL K+PF+LT FK MLQRGIEL+TLD SYVS+ SW FLV+FG++ L DE+S ++ + Q+G +G GP M FD K++ + L + H + LE EK+LLG+ P Sbjct: 3 EIILDPSIRDWVVLPMVIIFGCSAMVRHYVTLLLKNEKMASVEQLTPMNTVKRAQITRVNSKFISPDAFAMRRHYFTASQKKDGLKGALREKVKSEAMNQMMNPNSMLEMMKGNMTFMVSNFVMMGLMSYFFGGFVLAKVPFSLTQKFKMMLQRGIELNTLDVSYVSSVSWYFLVSFGMRGFLSLI-LDEKSASDDTKAMQMQMG---MGAGP--NMAFDAPKVYKQERVSLRLHNHDWALEFAEKKLLGEPIP 250
BLAST of NO12G02780 vs. NCBI_GenBank
Match: GBG32987.1 (ER membrane protein complex subunit 3 [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 173.7 bits (439), Expect = 8.700e-40 Identity = 99/246 (40.24%), Postives = 148/246 (60.16%), Query Frame = 0 Query: 12 DLLLDPAIRNWGVLPILVFVMCINLLRAYLTHLGKSNKAPELDDLRRRQTLARADRLRTKGNFIHQQGFNARKAWFVDKEKGEGVLLEEGVPGAVNPMSNPMGMMEMVKGQAYFGMTQMGMMQFSEMFFSGFVLVKIPFALTASFKGMLQRGIELSTLDASYVSATSWMFLVAFGVKDLQRLFTFDEESLQEEARVYGQQLGGVPVGGGPPAPMGFDCAKMFMAAKEGLEVVRHRFELEEVEKRLL 258 DL+LDP IRNW ++PIL+ ++ + + R++ L K + PE ++ Q L RA RLR + +GF+ R+ + V+ KG G L ++ A NPM NP GMM M+KG + + MM F FF GFV+VK+PF LT FK MLQR I L TLD SYVS+ SW FL FG++ L ++++ ++A++ QQ+G +GGG PM FD K + +EG++ ++H+F L E+E+ + Sbjct: 4 DLMLDPKIRNWVLIPILIIMLLVQMSRSWAQVLLKGSTPPEPGQFKQMQLLQRATRLRANNRLLSSRGFHMRRHFLVEL-KGIG-LRQKFEGSAPNPMQNPDGMMNMMKGNMTMMVPNIAMMTFISFFFQGFVMVKVPFMLTEGFKQMLQRDISLQTLDTSYVSSLSWYFLALFGLRGFFSL-VLGDQAVTDDAKIMQQQMG---MGGG--NPMQFDANKSYKQMREGVKHIQHQFFLGELEEEFM 241
BLAST of NO12G02780 vs. NCBI_GenBank
Match: CCA17543.1 (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 172.9 bits (437), Expect = 1.500e-39 Identity = 106/276 (38.41%), Postives = 150/276 (54.35%), Query Frame = 0 Query: 12 DLLLDPAIRNWGVLPILVFVMCINLLRAYLTHLGKSNKAPELDDLRRRQTLARADRLRTKGNFIHQQGFNARKAWFVDKEKG---EGVLLEEGVPGAVNPMSNPMGMMEMVKGQAYFGMTQMGMMQFSEMFFSGFVLVKIPFALTASFKGMLQRGIELSTLDASYVSATSWMFLVAFGVKDLQRLFTFDEESLQEEARVYGQQLGGVPVGGGPPAPMGFDCAKMFMAAKEGLEVVRHRFELEEVEKRLLGDRYPAMLSATERFLSLEEEARKMLRK 285 +++LDP+IR+W V P+L+ +C +LR Y+T L KS+ D+LR T+ RA R FIH + RK +F+ EK +GVL E+ ++N M NP M+EM+KG F ++ MM FF GFVL K+PF+LT FK MLQRGIEL+TLD SYVS+ SW FLV FG++ L E+S ++ + MGFD K + + L + H + LE E+ LLG+ P ++ATE ++A RK Sbjct: 3 EIILDPSIRDWVVFPMLIIFVCSAMLRHYVTLLLKSDTIANADELRPINTIKRAQITRMNSKFIHPDAYAMRKHYFIASEKKHGMKGVLREKVKNESMNQMMNPNSMLEMMKGNMTFMVSNFVMMGLMSYFFGGFVLAKVPFSLTQKFKMMLQRGIELNTLDVSYVSSVSWYFLVMFGIRGFLSLI-LGEQSASDDTKAM-----XXXXXXXXXXXMGFDAPKAYKQERVNLRLQVHEWALEHAERILLGETIP--ITATETNAMTHQDATPTTRK 270
BLAST of NO12G02780 vs. NCBI_GenBank
Match: POM65957.1 (Transmembrane protein [Phytophthora palmivora var. palmivora]) HSP 1 Score: 172.9 bits (437), Expect = 1.500e-39 Identity = 101/254 (39.76%), Postives = 146/254 (57.48%), Query Frame = 0 Query: 12 DLLLDPAIRNWGVLPILVFVMCINLLRAYLTHLGKSNKAPELDDLRRRQTLARADRLRTKGNFIHQQGFNARKAWFVDKEKGEGV---LLEEGVPGAVNPMSNPMGMMEMVKGQAYFGMTQMGMMQFSEMFFSGFVLVKIPFALTASFKGMLQRGIELSTLDASYVSATSWMFLVAFGVKDLQRLFTFDEESLQEEARVYGQQLGGVPVGGGPPAPMGFDCAKMFMAAKEGLEVVRHRFELEEVEKRLLGDRYP 263 +++LDP+IR+W VLP+++ C ++R Y+T L KS K ++ L T+ RA R FI F R+ +F +K +G+ L E+ A+N M NP M+EM+KG F ++ MM FF GFVL K+PF+LT FK MLQRGIEL+TLD SYVS+ SW FLV+FG++ L E+S ++ + Q+G +G GP M FD K++ + L + H + LE EK+LLG+ P Sbjct: 3 EIILDPSIRDWVVLPMVIIFGCSAMVRHYVTLLLKSEKMASVEQLMPMNTVKRAQITRVNSKFITPDAFAMRRHYFTASQKKDGMKGALREKVKSEAMNQMMNPNSMLEMMKGNMTFMVSNFVMMGLMSYFFGGFVLAKVPFSLTQKFKMMLQRGIELNTLDVSYVSSVSWYFLVSFGMRGFLSLI-LGEQSASDDTKAMQMQMG---MGAGP--NMAFDAPKVYKQERVSLRLHNHDWALEFAEKKLLGESIP 250
BLAST of NO12G02780 vs. NCBI_GenBank
Match: ETI47649.1 (hypothetical protein F443_08167 [Phytophthora parasitica P1569] >ETL94161.1 hypothetical protein L917_07813 [Phytophthora parasitica] >ETM47401.1 hypothetical protein L914_07878 [Phytophthora parasitica]) HSP 1 Score: 171.4 bits (433), Expect = 4.300e-39 Identity = 100/254 (39.37%), Postives = 146/254 (57.48%), Query Frame = 0 Query: 12 DLLLDPAIRNWGVLPILVFVMCINLLRAYLTHLGKSNKAPELDDLRRRQTLARADRLRTKGNFIHQQGFNARKAWFVDKEKGEGV---LLEEGVPGAVNPMSNPMGMMEMVKGQAYFGMTQMGMMQFSEMFFSGFVLVKIPFALTASFKGMLQRGIELSTLDASYVSATSWMFLVAFGVKDLQRLFTFDEESLQEEARVYGQQLGGVPVGGGPPAPMGFDCAKMFMAAKEGLEVVRHRFELEEVEKRLLGDRYP 263 +++LDP+IR+W VLP+++ C ++R Y+T L K+ K ++ L T+ RA R FI F R+ +F +K +G+ L E+ A+N M NP M+EM+KG F ++ MM FF GFVL K+PF+LT FK MLQRGIEL+TLD SYVS+ SW FLV+FG++ L E+S ++ + Q+G +G GP M FD K++ + L + H + LE EK+LLG+ P Sbjct: 3 EIILDPSIRDWVVLPMVIIFGCSAMVRHYVTLLLKNEKMASVEQLTPMNTVKRAQITRVNSKFISPDAFAMRRHYFTASQKKDGLKGALREKVKSEAMNQMMNPNSMLEMMKGNMTFMVSNFVMMGLMSYFFGGFVLAKVPFSLTQKFKMMLQRGIELNTLDVSYVSSVSWYFLVSFGMRGFLSLI-LGEKSASDDTKAMQMQMG---MGAGP--NMAFDAPKVYKQERVSLRLHNHDWALEFAEKKLLGEPIP 250
BLAST of NO12G02780 vs. NCBI_GenBank
Match: ETK87585.1 (hypothetical protein L915_07991 [Phytophthora parasitica] >ETL41033.1 hypothetical protein L916_07914 [Phytophthora parasitica]) HSP 1 Score: 171.4 bits (433), Expect = 4.300e-39 Identity = 100/254 (39.37%), Postives = 146/254 (57.48%), Query Frame = 0 Query: 12 DLLLDPAIRNWGVLPILVFVMCINLLRAYLTHLGKSNKAPELDDLRRRQTLARADRLRTKGNFIHQQGFNARKAWFVDKEKGEGV---LLEEGVPGAVNPMSNPMGMMEMVKGQAYFGMTQMGMMQFSEMFFSGFVLVKIPFALTASFKGMLQRGIELSTLDASYVSATSWMFLVAFGVKDLQRLFTFDEESLQEEARVYGQQLGGVPVGGGPPAPMGFDCAKMFMAAKEGLEVVRHRFELEEVEKRLLGDRYP 263 +++LDP+IR+W VLP+++ C ++R Y+T L K+ K ++ L T+ RA R FI F R+ +F +K +G+ L E+ A+N M NP M+EM+KG F ++ MM FF GFVL K+PF+LT FK MLQRGIEL+TLD SYVS+ SW FLV+FG++ L E+S ++ + Q+G +G GP M FD K++ + L + H + LE EK+LLG+ P Sbjct: 3 EIILDPSIRDWVVLPMVIIFGCSAMVRHYVTLLLKNEKMASVEQLTPMNTVKRAQITRVNSKFISPDAFAMRRHYFTASQKKDGLKGALREKVKSEAMNQMMNPNSMLEMMKGNMTFMVSNFVMMGLMSYFFGGFVLAKVPFSLTQKFKMMLQRGIELNTLDVSYVSSVSWYFLVSFGMRGFLSLI-LGEKSASDDTKAMQMQMG---MGAGP--NMAFDAPKVYKQERVSLRLHNHDWALEFAEKKLLGEPIP 250 The following BLAST results are available for this feature:
BLAST of NO12G02780 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO12G02780 ID=NO12G02780|Name=NO12G02780|organism=Nannochloropsis oceanica|type=gene|length=5076bpback to top protein sequence of NO12G02780.1 >NO12G02780.1-protein ID=NO12G02780.1-protein|Name=NO12G02780.1|organism=Nannochloropsis oceanica|type=polypeptide|length=304bpback to top Synonyms
Publications
|