NO12G02490, NO12G02490 (gene) Nannochloropsis oceanica

Overview
NameNO12G02490
Unique NameNO12G02490
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1990
Alignment locationchr12:712172..714161 -

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Properties
Property NameValue
DescriptionCobalamin (Vitamin B12) biosynthesis CobW
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr12genomechr12:712172..714161 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR003495CobW/HypB/UreG_dom
IPR011629Cbl_biosynth_CobW-like_C
Homology
BLAST of NO12G02490 vs. NCBI_GenBank
Match: EWM25776.1 (Cobalamin (vitamin B12) biosynthesis CobW [Nannochloropsis gaditana])

HSP 1 Score: 703.0 bits (1813), Expect = 8.300e-199
Identity = 364/629 (57.87%), Postives = 466/629 (74.09%), Query Frame = 0
Query:    1 MVEPINLCLGYEQRVLDSLTRPFILPVTLITGFLGSGKTTLLRSLLAQKQNLRIATLVNDLGEFNHDVQLLELVTT--SSLKPMHH---------PLSHQPASDRVIDLHGNCLCCSNLQQDMRQNVWECLQTPDGEARAVDYLVIETSGVTDPETLIRALDEKFGKMTRARLDSVVTVVDADVLYSELTSSMNCATKAAPDD-DISVVGRVGVSAPPLMSTARRHQLECADIILLNKIDLLQDSSQLDIVEACLQTLNPLARIHRTRYAEVPLPCVLDVELPDVGIGQMTHETGTANFATRNASTLRSQASRNVTIRRKANCLLTGSTAACAADAPALTDKNPMATHLITDGLSALTFESTCPFLLYKLQHFFSHVFPAEAVVRCKGFMHVRDLPGRRVALSMSGRRRFHVSDEGPWQSAPKTQLVFIGHEPGFDKAVVEIALTEACAGWDGNVEKGGNDDASASVQLAAKVRALVAQDERMELVDLHTLLAPLLFPRM-RDKAEESMSSLPVWANCLVAFRLTGAPSLGVTSEHLRMTHGVDLNAMSRALQAKVNLAGVLEMPLLHTLPFGGGEEDVALCFVVKDGEEAEGRGETYYTKAWEWMVSAAANTVTSRFLGHLKLCKCGH 617
            M +PIN+C+ YEQR LD+LT PFILPVT+ITG+LGSGKTTLLR LL QK+NLRIA +VNDLG+FNHDVQLL+L  T  +S  P +H         P      SDR++DLHG+CLCCS+LQQ+MRQN+WECLQTP+ E RA+DYLVIETSGVTDPE +I+ALDEKFGKMTRARLDSVVT+VDADVL++EL  S    T A  D    ++   V  ++ P +   RR Q+ECAD+I+LNK DL++D + LD +EA L+ LNPLARIHRTR+A++PLPCVLDVELPD+G G MTHE   A +ATR  STLRS+ S+ V+ R +   L TG+       A A +D+N   +HL+++G+SA TFES  PFLL KLQ FFSHVFPAEAV+R KGF++VR+L GRRVALS+SGRRRFH+SDEG W SAP TQ+VFIG   G+ K+ ++ +L  AC   D       +D   AS  LAA++R ++A D+RME++D   +L PLL  ++ R+    +  SLP W +CLV FRLTGAPSLGVT++HLR+THGVDL+A++ +LQ KVN+AG+   PLL+TLPF G E  +ALCFVV++G   +G+G  Y++  WEW V+  A++V +R L HLKLCKCGH
Sbjct:    1 MTDPINMCMTYEQRTLDALTTPFILPVTIITGYLGSGKTTLLRKLLTQKKNLRIAAMVNDLGDFNHDVQLLQLEKTVANSSSPSNHGFSQAARLSPDKSNAPSDRIMDLHGSCLCCSHLQQEMRQNIWECLQTPEQEERAIDYLVIETSGVTDPERIIQALDEKFGKMTRARLDSVVTMVDADVLHAELVDS----TPAVRDTRGATLSAHVPSASHPGIPPTRRRQIECADVIILNKTDLVKDLAYLDDLEAFLRKLNPLARIHRTRFADLPLPCVLDVELPDLGAGSMTHEESNALYATRKVSTLRSEPSQAVSSRARKTDLFTGA-------ATAASDQN-SRSHLVSEGISAFTFESKSPFLLRKLQRFFSHVFPAEAVIRSKGFLYVRELAGRRVALSISGRRRFHLSDEGTWSSAPGTQVVFIGRLSGYQKSQIQTSLQNACKADDEETSFPLSDPHLASSSLAARIRDMIALDKRMEVMDARAILGPLLRQQLKRNYVGAAPHSLPSWVDCLVTFRLTGAPSLGVTADHLRLTHGVDLDALNISLQQKVNMAGIQGRPLLYTLPFDGEERGIALCFVVEEGNAEDGKGRAYFSSTWEW-VTLLADSVIARNLSHLKLCKCGH 616          
BLAST of NO12G02490 vs. NCBI_GenBank
Match: CBN73919.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 235.3 bits (599), Expect = 4.900e-58
Identity = 189/546 (34.62%), Postives = 261/546 (47.80%), Query Frame = 0
Query:    6 NLCLGYEQRVLDSLTRPFILPVTLITGFLGSGKTTLLRSLLAQKQNLRIATLVNDLGEFNHDVQLLELVTTSSLKPMHHPLSHQPASDRVIDLHGNCLCC-SNLQQDMRQNVWECLQTPDGEARAVDYLVIETSGVTDPETLIRALDEKFGKMTRARLDSVVTVVDADVLYSELTSSMNCATKAAPDDDISVVGRVGVSAPPLMSTARRHQLECADIILLNKIDLLQDSSQLDIVEACLQTLNPLARIHRTRYAEVPLPCVLDVELPDVGIGQMTHETGTANFATRNASTLRSQASRNVTIRRKANCLLTGSTAACAADAPALTDKNPMATHLITDGLSALTFESTCPFLLYKLQHFFSHVFPAEAVVRCKGFMHVRDLPGRRVALSMSGRRRFHVSDEGPWQSAPKTQLVFIGHEPGFDKAVVEIAL------TEACAGWDGNVEKGGNDDASASVQLAAKVRALVAQDERMELVDLHTLLAPLLFPRMRDKAEESMSSLPVWANCLVAFRLTGAPSLGVTSEHLRMTHGVDLNAMSRALQAKVN 545
            NL   YE+R  D+  +  +LPVT++TGFLG+GKTTLLR +L  K NLRIA +VN+ G  +HD  +LE                   +D V  L G C+CC ++L   + + V E L+ PD      DYLVIETSGV+DPE+++RALD+ FGK+TRARLDSVVTVVDAD L  +L  +                G         M  + RHQLE AD+ILLNK DLL D     + E  + ++NP AR+    Y +VPL  VLDVE P   I  ++HE   A  AT  ++  R    R+    R+  C   G+TA+                                     + Q +  H  PA  VVR KG +   +    R   +MSGRRR     +G WQ      LV IG   G D+A V  AL      T + AG + + +  G    SA ++   +    + +D+            PL  P  R+       + P  A  +V FR TGA + G+    L +  GV+L+A++R++   VN
Sbjct:    8 NLYRMYEKRQYDATRQRPVLPVTIVTGFLGAGKTTLLRKILRSKHNLRIAAVVNEYGTVDHDGGVLE---------------RDGQTDSVDKLMGGCVCCHTSLGGQLEEKVSELLRRPDHAEDRYDYLVIETSGVSDPESIVRALDKTFGKLTRARLDSVVTVVDADALSHQLEEA---------------AGAGXXXXXXGMLVSMRHQLESADVILLNKADLLDDQRLSKLTEE-VASVNPAARVEFCSYGKVPLHSVLDVEAPRTDIQGVSHEAAVA--ATDTSARRRWGRRRH----RRDTC---GTTASS------------------------------------RFQDWVCHGMPA-GVVRVKGVLAFDEDRLTRSVFNMSGRRRLSFETDGVWQGPMSLHLVVIG--VGMDRAGVLSALEGLRVDTSSGAGSERHCDGRG----SAELEKETERMTRILEDD------------PLFDPVPRE-------ATPSCAQHVVRFRFTGAGAYGIPPSQLCIKFGVNLDAVNRSILRAVN 451          
BLAST of NO12G02490 vs. NCBI_GenBank
Match: KUF99497.1 (hypothetical protein AM588_10010984 [Phytophthora nicotianae])

HSP 1 Score: 214.9 bits (546), Expect = 6.900e-52
Identity = 184/555 (33.15%), Postives = 263/555 (47.39%), Query Frame = 0
Query:    5 INLCLGYEQRVLDSLTRPFILPVTLITGFLGSGKTTLLRSLLAQKQNLRIATLVNDLGEFNHDVQLLELVTTSSLKPMHHPLSHQPASDRVIDLHGNCLCCSNLQQDMRQNVWECLQTPDGEARA--VDYLVIETSGVTDPETLIRALDEKFGKMTRARLDSVVTVVDADVLYSELTSSMNCATKAAPDDDISVVGRVGVSAPPLMSTARRHQLECADIILLNKIDLLQDSSQLDIVEACLQTLNPLARIHRTRYAEVPLPCVLDVELP-DVGIGQMTHETGTANFATRNASTLR---SQASRNVTIRRKANCLLTGSTAACAADAPALTDKNPMATHLITDGLSALTFESTCPFLLYKLQHFFSHVFPAEAVVRCKGFMHVRDLPGRRVALSMSGRRRFHVSDEGPWQSAPKTQLVFIGHE------PGFDKAVVEIALTEACAGWDGNVEKGGNDDASASVQLAAKVRALVAQDERMELVDLHTLLAPLLFPRMRDKAEESMSSLPVWANCLVAFRLTGAPSLGVTSEHLRMTHGVDLNAMSRALQAKVNLAG 548
            +NLCLG E+++L    +   LPVT++TGFLG+GKT+LL+ +L  K NLR+A  V+DL   N D     L+  + L    + L    A              S+L    +  VW+ L   D  A    VDYLV+ETSG TDP  L+ A+ EKFGKMTRARLDSVVTVVD D               A   D +  V    V+           QL CAD++LLNK+DLL D ++L      ++   P AR++ T + +V LP VLD+  P DV  G ++HE   A + T   S L    + AS  + + R++                AL +  P      +   +++ FE T P  L  +  +  H  P    +R KG M++ +LP  R  + +SG+RR  V + G WQS PKTQ V IG          FD+A    +L    +     +E    ++ S+ V   AK++A    DER E + +               AE S           +AFRLT  P+  +    LR  H VD+N +++ L  +VN +G
Sbjct:   14 VNLCLGAERQLLARNAQKRRLPVTIVTGFLGAGKTSLLQHVLQHKLNLRVACAVSDLAAINVDA----LLVANQLAGNGNKLFELKADPN-----------SSLDA-FKDAVWQVLNEDDDAAALGHVDYLVMETSGTTDPTQLVAAVQEKFGKMTRARLDSVVTVVDGD---------------AVAQDALHGVEPCAVAV---------RQLRCADVVLLNKVDLL-DETKLKTARQVIEKYAPSARVYETDHGQVYLPHVLDIAPPEDVFNGGVSHEKVQAQWNT-GLSALNGAVTPASSRLRVERRSEV--------------ALNEVPP------SQAFASVAFERTEPTPLAAVHDWIQHHLP-HGTLRAKGVMYISELPKYRFVVQLSGKRRLEVENAGVWQSTPKTQFVVIGFSSRSSDGEQFDEAQALESLETCLSRSTDQLE----ENESSRVACTAKLQA----DERFETLAV--------------SAEAS----------TIAFRLT-CPTSTLDETMLRHHHHVDMNELTKRLVREVNASG 472          
BLAST of NO12G02490 vs. NCBI_GenBank
Match: XP_009530133.1 (hypothetical protein PHYSODRAFT_302632 [Phytophthora sojae] >EGZ16384.1 hypothetical protein PHYSODRAFT_302632 [Phytophthora sojae])

HSP 1 Score: 214.5 bits (545), Expect = 9.000e-52
Identity = 178/557 (31.96%), Postives = 255/557 (45.78%), Query Frame = 0
Query:    5 INLCLGYEQRVLDSLTRPFILPVTLITGFLGSGKTTLLRSLLAQKQNLRIATLVNDLGEFNHDVQLLELVTTSSLKPMHHPLSHQPASDRVIDLHGNCLCCSNLQQDMRQNVWECL-QTPDGEAR--AVDYLVIETSGVTDPETLIRALDEKFGKMTRARLDSVVTVVDADVLYSELTSSMNCATKAAPDDDISVVGRVGVSAPPLMSTARRHQLECADIILLNKIDLLQDSSQLDIVEACLQTLNPLARIHRTRYAEVPLPCVLDVELP-DVGIGQMTHETGTANF----------ATRNASTLRSQASRNVTIRRKANCLLTGSTAACAADAPALTDKNPMATHLITDGLSALTFESTCPFLLYKLQHFFSHVFPAEAVVRCKGFMHVRDLPGRRVALSMSGRRRFHVSDEGPWQSAPKTQLVFIGHEPGFDKAVVEIALTEACAGWDGNVEKGGNDDASASVQLAAKVRALVAQDERMELVDLHTLLAPLLFPRMRDKAEESMSSLPVWANCLVAFRLTGAPSLGVTSEHLRMTHGVDLNAMSRALQAKVNLAG 548
            +NLCLG E+++L    +   LPVT++TGFLG+GKT+LL+ +L  K NLR+A  V+DL   N D  L+    T+    +   L   P S                    +  VW+ L    DG+A   +VDYLV+ETSG TDP  L+ A+ EKFGKMTRARLDSVVTVVD D               A   D  + VG   V+           QL+CAD++LLNK+DL+ D  +L      +Q   P AR++ T + +V LP VLD+  P DV  G ++HE   A +           T   S LR      V ++++ N   T S A                        +++ +E T P  L  +  +  H  P +  +R KG M++ +LP  R  + +SG+RR  V + G WQS PKTQ V IG               +A  G +  + +  +D  S     +A   A +  DER E +                 A    ++        V FRLT  P+  +    LR  H VD+N +++ L  +VN +G
Sbjct:   12 VNLCLGAERQLLARNAQKRRLPVTIVTGFLGAGKTSLLQHVLQHKLNLRVACAVSDLAAINVDALLVGGQLTAGGNKLFQ-LRADPNSSLAA---------------FKDAVWQVLNDDSDGDAALGSVDYLVMETSGTTDPTQLVAAVQEKFGKMTRARLDSVVTVVDGD---------------AVAQDAANGVGPCAVAI---------RQLQCADVVLLNKVDLM-DEDKLQAARRVVQKYAPCARVYETDHGQVYLPHVLDIAPPEDVFNGGVSHEKVEAQWNTGLSALNGAVTPAPSRLRVDRGSEVAVKQEVN---TPSQA-----------------------FASVAYERTAPTSLAAVHDWIQHHLP-KGTLRAKGVMYIAELPKYRFVVQLSGKRRLEVENAGAWQSTPKTQFVVIGLNNPSSSNGEHFDEVQALKGLETCLSRSVHDLDSGVESTSATCLAKLEADERFETL-----------------ASSGQAT-------TVVFRLT-CPTSTLDETMLRHHHHVDMNELTKRLVREVNASG 475          
BLAST of NO12G02490 vs. NCBI_GenBank
Match: KUF84086.1 (hypothetical protein AM587_10013497 [Phytophthora nicotianae])

HSP 1 Score: 214.2 bits (544), Expect = 1.200e-51
Identity = 184/555 (33.15%), Postives = 262/555 (47.21%), Query Frame = 0
Query:    5 INLCLGYEQRVLDSLTRPFILPVTLITGFLGSGKTTLLRSLLAQKQNLRIATLVNDLGEFNHDVQLLELVTTSSLKPMHHPLSHQPASDRVIDLHGNCLCCSNLQQDMRQNVWECLQTPDGEARA--VDYLVIETSGVTDPETLIRALDEKFGKMTRARLDSVVTVVDADVLYSELTSSMNCATKAAPDDDISVVGRVGVSAPPLMSTARRHQLECADIILLNKIDLLQDSSQLDIVEACLQTLNPLARIHRTRYAEVPLPCVLDVELP-DVGIGQMTHETGTANFATRNASTLR---SQASRNVTIRRKANCLLTGSTAACAADAPALTDKNPMATHLITDGLSALTFESTCPFLLYKLQHFFSHVFPAEAVVRCKGFMHVRDLPGRRVALSMSGRRRFHVSDEGPWQSAPKTQLVFIGHE------PGFDKAVVEIALTEACAGWDGNVEKGGNDDASASVQLAAKVRALVAQDERMELVDLHTLLAPLLFPRMRDKAEESMSSLPVWANCLVAFRLTGAPSLGVTSEHLRMTHGVDLNAMSRALQAKVNLAG 548
            +NLCLG E+++L    +   LPVT++TGFLG+GKT+LL+ +L  K NLR+A  V+DL   N D     L+  + L    + L    A              S+L    +  VW+ L   D  A    VDYLV+ETSG TDP  L+ A+ EKFGKMTRARLDSVVTVVD D               A   D +  V    V+           QL CAD++LLNK+DLL D ++L      ++   P AR++ T + +V LP VLD+  P DV  G ++HE   A + T   S L    + AS  + + R++                AL +  P      +    ++ FE T P  L  +  +  H  P    +R KG M++ +LP  R  + +SG+RR  V + G WQS PKTQ V IG          FD+A    +L    +     +E    ++ S+ V   AK++A    DER E + +               AE S           +AFRLT  P+  +    LR  H VD+N +++ L  +VN +G
Sbjct:   14 VNLCLGAERQLLARNAQKRRLPVTIVTGFLGAGKTSLLQHVLQHKLNLRVACAVSDLAAINVDA----LLVANQLAGNGNKLFELKADPN-----------SSLDA-FKDAVWQVLNEDDDAAALGHVDYLVMETSGTTDPTQLVAAVQEKFGKMTRARLDSVVTVVDGD---------------AVAQDALHGVEPCAVAV---------RQLRCADVVLLNKVDLL-DETKLKTARQVIEKYAPSARVYETDHGQVYLPHVLDIAPPEDVFNGGVSHEKVQAQWNT-GLSALNGAVTPASSRLRVERRSEV--------------ALNEVPP------SQAFXSVAFERTEPTPLAAVHDWIQHHLP-HGTLRAKGVMYISELPKYRFVVQLSGKRRLEVENAGVWQSTPKTQFVVIGFSSRSSDGEQFDEAQALESLETCLSRSTDQLE----ENESSRVACTAKLQA----DERFETLAV--------------SAEAS----------TIAFRLT-CPTSTLDETMLRHHHHVDMNELTKRLVREVNASG 472          
BLAST of NO12G02490 vs. NCBI_GenBank
Match: ETL92862.1 (hypothetical protein L917_08891 [Phytophthora parasitica])

HSP 1 Score: 212.2 bits (539), Expect = 4.500e-51
Identity = 184/552 (33.33%), Postives = 259/552 (46.92%), Query Frame = 0
Query:    5 INLCLGYEQRVLDSLTRPFILPVTLITGFLGSGKTTLLRSLLAQKQNLRIATLVNDLGEFNHDVQLLELVTTSSLKPMHHPLSHQPASDRVIDLHGNCLCCSNLQQDMRQNVWECLQTPDGEARA--VDYLVIETSGVTDPETLIRALDEKFGKMTRARLDSVVTVVDADVLYSELTSSMNCATKAAPDDDISVVGRVGVSAPPLMSTARRHQLECADIILLNKIDLLQDSSQLDIVEACLQTLNPLARIHRTRYAEVPLPCVLDVELP-DVGIGQMTHETGTANFATRNASTLRSQASRNVTIRRKANCLLTGSTAACAADAPALTDKNPMATHLITDGLSALTFESTCPFLLYKLQHFFSHVFPAEAVVRCKGFMHVRDLPGRRVALSMSGRRRFHVSDEGPWQSAPKTQLVFIGHE------PGFDKAVVEIALTEACAGWDGNVEKGGNDDASASVQLAAKVRALVAQDERMELVDLHTLLAPLLFPRMRDKAEESMSSLPVWANCLVAFRLTGAPSLGVTSEHLRMTHGVDLNAMSRALQAKVNLAG 548
            +NLCLG E+++L    +   LPVT++TGFLG+GKT+LL+ +L  K NLR+A  V+DL   N D     L+  + L    + L    A              S+L    +  VW+ L   D  A    VDYLV+ETSG TDP  L+ A+ EKFGKMTRARLDSVVTVVD D               A   D +  V    V+           QL CAD++LLNK+DLL D ++L      ++   P AR++ T + +V LP VLD+  P DV  G ++HE   A +     +T  S  +  VT       +  GS  A     P             +   S++ FE T P  L  +  +  H  P    +R KG M++ +LP  R  + +SG+RR  V + G WQS PKTQ V IG          FD+A    +L    +     +E    ++ S+ V   AK++A    DER E + +               AE S           +AFRLT  P+  +    LR  H VD+N +++ L  +VN +G
Sbjct:   14 VNLCLGAERQLLARNAQKRRLPVTIVTGFLGAGKTSLLQHVLQHKLNLRVACAVSDLAAINVDA----LLVANQLAGNGNKLFELKADPN-----------SSLDA-FKDAVWQVLNEDDDTAALGHVDYLVMETSGTTDPTQLVAAVQEKFGKMTRARLDSVVTVVDGD---------------AVAQDALHGVEPCAVAV---------RQLRCADVVLLNKVDLL-DETKLKTARQVIEKYAPSARVYETDHGQVYLPHVLDIAPPEDVFNGGVSHEKVQAQW-----NTGLSALNGAVTPAPSRLRVERGSEVALNEVPP-------------SQAFSSVAFERTEPTPLAAVHDWIQHHLP-HGTLRAKGVMYISELPKYRFVVQLSGKRRLEVENAGVWQSTPKTQFVVIGFSSRSSDGEQFDEAQALESLETCLSRSTDQLE----ENESSRVACTAKLQA----DERFETLAV--------------SAEAS----------TIAFRLT-CPTSTLDETMLRHHHHVDMNELTKRLVREVNASG 472          
BLAST of NO12G02490 vs. NCBI_GenBank
Match: ETI46385.1 (hypothetical protein F443_09221 [Phytophthora parasitica P1569] >ETK86320.1 hypothetical protein L915_09044 [Phytophthora parasitica] >ETM46163.1 hypothetical protein L914_08911 [Phytophthora parasitica] >ETO75066.1 hypothetical protein F444_09300 [Phytophthora parasitica P1976] >ETP16194.1 hypothetical protein F441_09178 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 211.1 bits (536), Expect = 9.900e-51
Identity = 183/552 (33.15%), Postives = 259/552 (46.92%), Query Frame = 0
Query:    5 INLCLGYEQRVLDSLTRPFILPVTLITGFLGSGKTTLLRSLLAQKQNLRIATLVNDLGEFNHDVQLLELVTTSSLKPMHHPLSHQPASDRVIDLHGNCLCCSNLQQDMRQNVWECLQTPDGEARA--VDYLVIETSGVTDPETLIRALDEKFGKMTRARLDSVVTVVDADVLYSELTSSMNCATKAAPDDDISVVGRVGVSAPPLMSTARRHQLECADIILLNKIDLLQDSSQLDIVEACLQTLNPLARIHRTRYAEVPLPCVLDVELP-DVGIGQMTHETGTANFATRNASTLRSQASRNVTIRRKANCLLTGSTAACAADAPALTDKNPMATHLITDGLSALTFESTCPFLLYKLQHFFSHVFPAEAVVRCKGFMHVRDLPGRRVALSMSGRRRFHVSDEGPWQSAPKTQLVFIGHE------PGFDKAVVEIALTEACAGWDGNVEKGGNDDASASVQLAAKVRALVAQDERMELVDLHTLLAPLLFPRMRDKAEESMSSLPVWANCLVAFRLTGAPSLGVTSEHLRMTHGVDLNAMSRALQAKVNLAG 548
            +NLCLG E+++L    +   LPVT++TGFLG+GKT+LL+ +L  K NLR+A  V+DL   N D     L+  + L    + L    A              S+L    +  VW+ L   D  A    VDYLV+ETSG TDP  L+ A+ EKFGKMTRARLDSVVTVVD D               A   D +  V    V+           QL CAD++LLNK+DLL D ++L      ++   P AR++ T + +V LP VLD+  P DV  G ++HE   A +     +T  S  +  VT       +  GS  A     P             +   +++ FE T P  L  +  +  H  P    +R KG M++ +LP  R  + +SG+RR  V + G WQS PKTQ V IG          FD+A    +L    +     +E    ++ S+ V   AK++A    DER E + +               AE S           +AFRLT  P+  +    LR  H VD+N +++ L  +VN +G
Sbjct:   14 VNLCLGAERQLLARNAQKRRLPVTIVTGFLGAGKTSLLQHVLQHKLNLRVACAVSDLAAINVDA----LLVANQLAGNGNKLFELKADPN-----------SSLDA-FKDAVWQVLNEDDDAAALGHVDYLVMETSGTTDPTQLVAAVQEKFGKMTRARLDSVVTVVDGD---------------AVAQDALHGVEPCAVAV---------RQLRCADVVLLNKVDLL-DETKLKTARQVIEKYAPSARVYETDHGQVYLPHVLDIAPPEDVFNGGVSHEKVQAQW-----NTGLSALNGAVTPAPSRLRVERGSEVALNEVPP-------------SQAFASVAFERTEPTPLAAVHDWIQHHLP-HGTLRAKGVMYISELPKYRFVVQLSGKRRLEVENAGVWQSTPKTQFVVIGFSSRSSDGEQFDEAQALESLETCLSRSTDQLE----ENESSRVACTAKLQA----DERFETLAV--------------SAEAS----------TIAFRLT-CPTSTLDETMLRHHHHVDMNELTKRLVREVNASG 472          
BLAST of NO12G02490 vs. NCBI_GenBank
Match: ETL39743.1 (hypothetical protein L916_08958 [Phytophthora parasitica])

HSP 1 Score: 211.1 bits (536), Expect = 9.900e-51
Identity = 183/552 (33.15%), Postives = 259/552 (46.92%), Query Frame = 0
Query:    5 INLCLGYEQRVLDSLTRPFILPVTLITGFLGSGKTTLLRSLLAQKQNLRIATLVNDLGEFNHDVQLLELVTTSSLKPMHHPLSHQPASDRVIDLHGNCLCCSNLQQDMRQNVWECLQTPDGEARA--VDYLVIETSGVTDPETLIRALDEKFGKMTRARLDSVVTVVDADVLYSELTSSMNCATKAAPDDDISVVGRVGVSAPPLMSTARRHQLECADIILLNKIDLLQDSSQLDIVEACLQTLNPLARIHRTRYAEVPLPCVLDVELP-DVGIGQMTHETGTANFATRNASTLRSQASRNVTIRRKANCLLTGSTAACAADAPALTDKNPMATHLITDGLSALTFESTCPFLLYKLQHFFSHVFPAEAVVRCKGFMHVRDLPGRRVALSMSGRRRFHVSDEGPWQSAPKTQLVFIGHE------PGFDKAVVEIALTEACAGWDGNVEKGGNDDASASVQLAAKVRALVAQDERMELVDLHTLLAPLLFPRMRDKAEESMSSLPVWANCLVAFRLTGAPSLGVTSEHLRMTHGVDLNAMSRALQAKVNLAG 548
            +NLCLG E+++L    +   LPVT++TGFLG+GKT+LL+ +L  K NLR+A  V+DL   N D     L+  + L    + L    A              S+L    +  VW+ L   D  A    VDYLV+ETSG TDP  L+ A+ EKFGKMTRARLDSVVTVVD D               A   D +  V    V+           QL CAD++LLNK+DLL D ++L      ++   P AR++ T + +V LP VLD+  P DV  G ++HE   A +     +T  S  +  VT       +  GS  A     P             +   +++ FE T P  L  +  +  H  P    +R KG M++ +LP  R  + +SG+RR  V + G WQS PKTQ V IG          FD+A    +L    +     +E    ++ S+ V   AK++A    DER E + +               AE S           +AFRLT  P+  +    LR  H VD+N +++ L  +VN +G
Sbjct:   14 VNLCLGAERQLLARNAQKRRLPVTIVTGFLGAGKTSLLQHVLQHKLNLRVACAVSDLAAINVDA----LLVANQLAGNGNKLFELKADPN-----------SSLDA-FKDAVWQVLNEDDDAAALGHVDYLVMETSGTTDPTQLVAAVQEKFGKMTRARLDSVVTVVDGD---------------AVAQDALHGVEPCAVAV---------RQLRCADVVLLNKVDLL-DETKLKTARQVIEKYAPSARVYETDHGQVYLPHVLDIAPPEDVFNGGVSHEKVQAQW-----NTGLSALNGAVTPAPSRLRVERGSEVALNEVPP-------------SQAFASVAFERTEPTPLAAVHDWIQHHLP-HGTLRAKGVMYISELPKYRFVVQLSGKRRLEVENAGVWQSTPKTQFVVIGFSSRSSDGEQFDEAQALESLETCLSRSTDQLE----ENESSRVACTAKLQA----DERFETLAV--------------SAEAS----------TIAFRLT-CPTSTLDETMLRHHHHVDMNELTKRLVREVNASG 472          
BLAST of NO12G02490 vs. NCBI_GenBank
Match: ETP44245.1 (hypothetical protein F442_09145 [Phytophthora parasitica P10297])

HSP 1 Score: 211.1 bits (536), Expect = 9.900e-51
Identity = 183/552 (33.15%), Postives = 259/552 (46.92%), Query Frame = 0
Query:    5 INLCLGYEQRVLDSLTRPFILPVTLITGFLGSGKTTLLRSLLAQKQNLRIATLVNDLGEFNHDVQLLELVTTSSLKPMHHPLSHQPASDRVIDLHGNCLCCSNLQQDMRQNVWECLQTPDGEARA--VDYLVIETSGVTDPETLIRALDEKFGKMTRARLDSVVTVVDADVLYSELTSSMNCATKAAPDDDISVVGRVGVSAPPLMSTARRHQLECADIILLNKIDLLQDSSQLDIVEACLQTLNPLARIHRTRYAEVPLPCVLDVELP-DVGIGQMTHETGTANFATRNASTLRSQASRNVTIRRKANCLLTGSTAACAADAPALTDKNPMATHLITDGLSALTFESTCPFLLYKLQHFFSHVFPAEAVVRCKGFMHVRDLPGRRVALSMSGRRRFHVSDEGPWQSAPKTQLVFIGHE------PGFDKAVVEIALTEACAGWDGNVEKGGNDDASASVQLAAKVRALVAQDERMELVDLHTLLAPLLFPRMRDKAEESMSSLPVWANCLVAFRLTGAPSLGVTSEHLRMTHGVDLNAMSRALQAKVNLAG 548
            +NLCLG E+++L    +   LPVT++TGFLG+GKT+LL+ +L  K NLR+A  V+DL   N D     L+  + L    + L    A              S+L    +  VW+ L   D  A    VDYLV+ETSG TDP  L+ A+ EKFGKMTRARLDSVVTVVD D               A   D +  V    V+           QL CAD++LLNK+DLL D ++L      ++   P AR++ T + +V LP VLD+  P DV  G ++HE   A +     +T  S  +  VT       +  GS  A     P             +   +++ FE T P  L  +  +  H  P    +R KG M++ +LP  R  + +SG+RR  V + G WQS PKTQ V IG          FD+A    +L    +     +E    ++ S+ V   AK++A    DER E + +               AE S           +AFRLT  P+  +    LR  H VD+N +++ L  +VN +G
Sbjct:   14 VNLCLGAERQLLARNAQKRRLPVTIVTGFLGAGKTSLLQHVLQHKLNLRVACAVSDLAAINVDA----LLVANQLAGNGNKLFELKADPN-----------SSLDA-FKDAVWQVLNEDDDTAALGHVDYLVMETSGTTDPTQLVAAVQEKFGKMTRARLDSVVTVVDGD---------------AVAQDALHGVEPCAVAV---------RQLRCADVVLLNKVDLL-DETKLKTARQVIEKYAPSARVYETDHGQVYLPHVLDIAPPEDVFNGGVSHEKVQAQW-----NTGLSALNGAVTPAPSRLRVERGSEVALNEVPP-------------SQAFASVAFERTEPTPLAAVHDWIQHHLP-HGTLRAKGVMYISELPKYRFVVQLSGKRRLEVENAGVWQSTPKTQFVVIGFSSRSSDGEQFDEAQALESLETCLSRSTDQLE----ENESSRVACTAKLQA----DERFETLAV--------------SAEAS----------TIAFRLT-CPTSTLDETMLRHHHHVDMNELTKRLVREVNASG 472          
BLAST of NO12G02490 vs. NCBI_GenBank
Match: OQS01728.1 (hypothetical protein ACHHYP_00316 [Achlya hypogyna])

HSP 1 Score: 209.5 bits (532), Expect = 2.900e-50
Identity = 193/622 (31.03%), Postives = 275/622 (44.21%), Query Frame = 0
Query:    2 VEPINLCLGYEQRVLDSLTRPFILPVTLITGFLGSGKTTLLRSLLAQKQNLRIATLVNDLGEFNHDVQLLELVTTSSLKPMHHPLSHQPASDRVIDLHGNCLCCS-NLQQD----MRQNVWECLQTPDGEARAVDYLVIETSGVTDPETLIRALDEKFGKMTRARLDSVVTVVDADVLYSELTSSMNCATKAAPDDDISVVGRVGVSAPPLMSTARRHQLECADIILLNKIDLLQDSSQLDIVEACLQTLNPL-ARIHRTRYAEVPLPCVLDVELPDVGIGQMTHETGTANFATRNASTLRSQASRNVTIRRKANCLLTGSTAACAADAPALTDKNPMATHLITDGLSALTFESTCPFLLYKLQHFFSHVFPAEAVVRCKGFMHVRDLPGRRVALSMSGRRRFHVSDEGPWQSAPKTQLVFIGHEPGFDKAVVEIALTEACAGWDGNVEKGGNDDASASVQLAAKVRALVAQDERMELVDLHTLLAPLLFPRMRDKAEESMSSLPVWANCLVAFRLTGAPSLGVTSEHLRMTHGVDLNAMSRALQAKVNLA--GVLEMPLLHTLPFGGGEEDVALCFVVKDGEEAEGRGETYYTKAWEWMVSAAANTVTSRFLGHLKLCKCG 616
            ++ +NL L YE+ +L   TR   LPVT++TGFLGSGKTTLLR +L  + NLR+   V+D+   N D Q   L+T S  +           +     +   C+CC   L  D     +  VW+ L   D    A+DYLV+ETSG TDP  LI+A+  +FGKMTRARLDSVVTVVDAD L +              D D  V        PP      ++QL+CAD++LLNK+DLLQ   +     A +    P  A ++ T++ +V LP +LD+  P+     ++HE   A++ T +ASTLR         R + N          A   P+ TD             S    ++  P  L  L  +     P ++ +R KG +++ + P  R  L +SG++R  V++ G W  AP TQL  IG   GFD   V+  L+    G     E   + DA            L+  DER E++                             N  + FRL   P   +    +R  H +D+NA++  L A+VN +  G L + L H      GE  V +         A   G       W   VS+ A  +       L  C CG
Sbjct:    8 IDRLNLSLHYEKLLLAPPTRQ--LPVTILTGFLGSGKTTLLRHILKNRLNLRVCCCVSDVAALNVDEQ---LITESKTR-----------TTTGFIMENGCMCCPVRLDMDDTNEFKDVVWQVLSQDD---MAMDYLVVETSGTTDPLALIQAIQARFGKMTRARLDSVVTVVDADALVA--------------DADAGV--------PP--CAVAQNQLKCADVVLLNKMDLLQTDERKARARAVVADWAPAGAHVYETKFCDVYLPRILDISPPEGIYNSVSHERVQAHWNTASASTLR---------RTQVN---------TADYLPSHTD------------WSTEVLDTRVPVSLPALHAWIGAKLP-QSTLRAKGILYLTEDPRHRYVLQLSGKKRLEVTNTGKWPCAPSTQLAVIG--TGFDLPQVQADLSALVEG----PELESHLDACT---------RLLEGDERFEVLG--------------------------GTNTEIRFRLV-CPVSTLNETMIRHHHHIDMNALNAQLAAEVNASGDGALVLALTH------GEATVLM---------ASAAGTHSLLTMWP-TVSSRAKAILYDVRKKLSECMCG 497          
The following BLAST results are available for this feature:
BLAST of NO12G02490 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM25776.18.300e-19957.87Cobalamin (vitamin B12) biosynthesis CobW [Nannoch... [more]
CBN73919.14.900e-5834.62conserved unknown protein [Ectocarpus siliculosus][more]
KUF99497.16.900e-5233.15hypothetical protein AM588_10010984 [Phytophthora ... [more]
XP_009530133.19.000e-5231.96hypothetical protein PHYSODRAFT_302632 [Phytophtho... [more]
KUF84086.11.200e-5133.15hypothetical protein AM587_10013497 [Phytophthora ... [more]
ETL92862.14.500e-5133.33hypothetical protein L917_08891 [Phytophthora para... [more]
ETI46385.19.900e-5133.15hypothetical protein F443_09221 [Phytophthora para... [more]
ETL39743.19.900e-5133.15hypothetical protein L916_08958 [Phytophthora para... [more]
ETP44245.19.900e-5133.15hypothetical protein F442_09145 [Phytophthora para... [more]
OQS01728.12.900e-5031.03hypothetical protein ACHHYP_00316 [Achlya hypogyna... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL125nonsL125Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL124nonsL124Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR015ncniR015Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR014ncniR014Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR007ngnoR007Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR006ngnoR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010187NSK010187Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO12G02490.1NO12G02490.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100176g11gene4734Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO12G02490.1NO12G02490.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO12G02490 ID=NO12G02490|Name=NO12G02490|organism=Nannochloropsis oceanica|type=gene|length=1990bp
CAGGTTGCGCTGGCCGTCACCATGGTCGAGCCCATCAATTTGTGTCTGGG
GTACGAACAGCGCGTGTTGGATTCCTTGACGCGACCTTTCATCTTGCCCG
TCACACTCATCACGGGTTTCCTCGGCTCAGGGAAGACAACCCTGCTGCGC
AGCCTCCTAGCGCAAAAGCAGAACCTTCGTATCGCCACTCTGGTCAACGA
CCTCGGAGAATTCAACCACGACGTGCAGTTGTTGGAGCTGGTTACGACTT
CCTCCCTCAAGCCCATGCATCACCCTCTCTCCCACCAGCCTGCCTCAGAT
CGCGTAATCGACCTGCACGGCAACTGTCTCTGCTGCTCAAATCTCCAGCA
AGACATGCGACAGAATGTATGGGAATGCTTGCAAACGCCGGACGGAGAAG
CCCGGGCTGTGGATTACCTGGTGATTGAAACGAGTGGTGTCACTGACCCG
GAGACCCTTATTCGCGCCTTGGACGAGAAATTCGGAAAGATGACTCGCGC
GCGCCTGGACAGTGTCGTGACTGTGGTGGATGCGGATGTATTGTACTCCG
AGCTGACTTCGTCTATGAATTGTGCGACAAAAGCCGCTCCTGATGATGAT
ATTTCGGTGGTGGGAAGAGTAGGAGTATCTGCTCCACCACTTATGTCCAC
CGCACGGCGACACCAACTCGAATGCGCCGATATCATTCTCCTCAACAAGA
TCGATCTCCTACAAGACTCTAGCCAACTAGATATTGTCGAAGCATGCTTG
CAGACACTCAACCCACTTGCTCGTATTCATCGCACGCGCTATGCAGAGGT
CCCTTTGCCCTGTGTCCTCGACGTGGAGCTCCCAGATGTTGGGATAGGCC
AGATGACACACGAGACGGGCACTGCGAACTTCGCCACCCGCAATGCCTCT
ACACTTCGATCTCAGGCCTCGCGCAACGTAACCATCAGAAGGAAGGCGAA
TTGTTTGCTGACAGGATCCACAGCTGCCTGTGCTGCTGATGCTCCGGCTT
TGACGGACAAGAACCCGATGGCTACCCACCTCATCACTGATGGCCTCTCT
GCTCTTACGTTTGAAAGCACCTGTCCATTCCTCCTGTACAAGCTCCAACA
TTTCTTCTCTCATGTTTTCCCTGCTGAGGCCGTGGTTCGCTGCAAAGGGT
TTATGCACGTCAGGGACCTGCCCGGGAGGCGCGTGGCTCTAAGCATGAGC
GGGCGTCGGCGTTTTCACGTCTCGGACGAAGGTCCATGGCAGTCGGCCCC
GAAGACGCAACTGGTCTTTATCGGCCACGAGCCCGGCTTTGATAAAGCAG
TGGTCGAGATTGCATTGACAGAAGCTTGTGCAGGTTGGGATGGGAACGTG
GAGAAAGGAGGAAATGATGATGCCTCAGCCTCAGTTCAATTGGCGGCCAA
AGTACGGGCCCTCGTCGCCCAGGATGAACGGATGGAATTGGTGGACCTCC
ACACACTCCTCGCACCTCTACTGTTCCCGCGTATGCGAGACAAGGCCGAG
GAGTCTATGTCCAGTCTGCCCGTGTGGGCGAACTGTTTGGTGGCATTTCG
CTTGACCGGGGCGCCGTCCTTGGGCGTGACATCGGAGCACCTACGAATGA
CACACGGAGTGGATCTAAATGCAATGAGTCGGGCCTTGCAAGCGAAGGTT
AATTTGGCCGGTGTGCTAGAAATGCCACTCCTACATACGTTGCCATTCGG
GGGGGGGGAAGAGGACGTGGCCTTGTGTTTTGTTGTGAAGGATGGGGAGG
AAGCGGAGGGACGAGGGGAAACGTACTATACCAAGGCGTGGGAGTGGATG
GTGTCAGCGGCGGCCAACACTGTGACTTCTCGCTTCTTGGGTCACTTGAA
GTTGTGCAAGTGCGGCCACTAAATTGTACAAATACCGCACATTATAACAG
AATGAAAGAAAACTTGTTGAACTATGTATCGGGGGACCATGTGAAGTCCG
CTCGCCAAACCATAAGCTCGCCGAGAATTGAAAAGTCATA
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protein sequence of NO12G02490.1

>NO12G02490.1-protein ID=NO12G02490.1-protein|Name=NO12G02490.1|organism=Nannochloropsis oceanica|type=polypeptide|length=617bp
MVEPINLCLGYEQRVLDSLTRPFILPVTLITGFLGSGKTTLLRSLLAQKQ
NLRIATLVNDLGEFNHDVQLLELVTTSSLKPMHHPLSHQPASDRVIDLHG
NCLCCSNLQQDMRQNVWECLQTPDGEARAVDYLVIETSGVTDPETLIRAL
DEKFGKMTRARLDSVVTVVDADVLYSELTSSMNCATKAAPDDDISVVGRV
GVSAPPLMSTARRHQLECADIILLNKIDLLQDSSQLDIVEACLQTLNPLA
RIHRTRYAEVPLPCVLDVELPDVGIGQMTHETGTANFATRNASTLRSQAS
RNVTIRRKANCLLTGSTAACAADAPALTDKNPMATHLITDGLSALTFEST
CPFLLYKLQHFFSHVFPAEAVVRCKGFMHVRDLPGRRVALSMSGRRRFHV
SDEGPWQSAPKTQLVFIGHEPGFDKAVVEIALTEACAGWDGNVEKGGNDD
ASASVQLAAKVRALVAQDERMELVDLHTLLAPLLFPRMRDKAEESMSSLP
VWANCLVAFRLTGAPSLGVTSEHLRMTHGVDLNAMSRALQAKVNLAGVLE
MPLLHTLPFGGGEEDVALCFVVKDGEEAEGRGETYYTKAWEWMVSAAANT
VTSRFLGHLKLCKCGH*
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Synonyms
Publications