NO12G02440, NO12G02440 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO12G02440 vs. NCBI_GenBank
Match: EWM25849.1 (hypothetical protein Naga_100021g74 [Nannochloropsis gaditana]) HSP 1 Score: 291.2 bits (744), Expect = 4.800e-75 Identity = 213/346 (61.56%), Postives = 239/346 (69.08%), Query Frame = 0 Query: 50 RALQAIGSQPLFSSGAYQGGWAGGGLNAGPGGRYLSSTLGDSFFLVSNRHAAAREGASMNWEGGNSAVSSSRQALPPRGGAVTGAVCGI--GAQGVSGLPPRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGFLEGVEAMQQDEVMRLLGCMKTLGDENAMLIKQVEDGGRVRQENERLRREMGEFQEQYAKKFRDLRSALEEFRRKYPSENNPTNHVASARETARVKTLESEIESLIVRLNREREAGRKKDAMIAKYQAWYNKLRQSVVHKKGGVVGDGGLXXXXXXXXXXXXXXXXGARAGSSSRSSIRPPQAR 394 RALQAIGSQPLFSSG YQ AGG PGGRYLSSTLGDSFFLV+NR AAAREGAS+ WEGG+SA+ SSR + GA GA + + PPR XXXXXXXXXXXXXXXXXXXXXXXXXXXXX FLEGVEA+QQ EV+RLL CMKTLGDENA+LIK+ EDG R RQENER+RRE EFQE YAK+F+ LR+ALEEFR KYP E+NP NHVAS RETARVK+LE+E+ESL VRLNRE+EAGRKKDAM+A+YQAWY KLRQSV KK G+ G+ G+ A S S+IRPPQ R Sbjct: 194 RALQAIGSQPLFSSGLYQPTGAGGHQGV-PGGRYLSSTLGDSFFLVNNRQAAAREGASLAWEGGSSALGSSRHS----RGAGRGAAASLRKPSSVAVAAPPRT---SAGTEESPFSRQGASTALPAASNLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFLEGVEAVQQGEVVRLLACMKTLGDENALLIKRAEDGERARQENERIRRETLEFQELYAKRFKGLRAALEEFREKYPHESNPANHVASLRETARVKSLEAEVESLTVRLNREKEAGRKKDAMLARYQAWYTKLRQSVGQKKSAAAGN-GMAHQQQLLGHQQKLGVRGSSACSGGNSNIRPPQGR 530
BLAST of NO12G02440 vs. NCBI_GenBank
Match: XP_008872234.1 (hypothetical protein H310_08313 [Aphanomyces invadans] >ETV98805.1 hypothetical protein H310_08313 [Aphanomyces invadans]) HSP 1 Score: 83.2 bits (204), Expect = 2.000e-12 Identity = 49/136 (36.03%), Postives = 83/136 (61.03%), Query Frame = 0 Query: 216 AMQQDEVMRLLGCMKTLGDENAMLIKQVEDGGRVRQENERLRREMGEFQEQYAKKFRDLRSALEEFRRKYPSENNPTNHVASARETARVKT-LESEIESLIVRLNREREAGRKKDAMIAKYQAWYNKLRQSVVHKK 351 A Q+ E RL+ +KTLG ENA LI+ E R+R+EN+RL M EF+ +Y +KF L+ ALEE+ R+ + + +H S + +++ +E++++ L L E+EA R+KD + +Y++W+ L+ S K+ Sbjct: 307 AHQKFEANRLMHTIKTLGSENARLIQDTESMARLREENKRLVHAMDEFKAEYHQKFAVLKRALEEWWRQDATNQSQRSHDTSRQSMEALESKMEADLQILRDELAAEKEASRQKDVQLQRYESWFKSLKASAKAKQ 442
BLAST of NO12G02440 vs. NCBI_GenBank
Match: GAX28444.1 (hypothetical protein FisN_4Hh365 [Fistulifera solaris]) HSP 1 Score: 83.2 bits (204), Expect = 2.000e-12 Identity = 48/123 (39.02%), Postives = 74/123 (60.16%), Query Frame = 0 Query: 221 EVMRLLGCMKTLGDENAMLIKQVEDGGRVRQENERLRREMGEFQEQYAKKFRDLRSALEEFRRKYPSENNPTNHVASARETARVKTLESEIESLIVRLNREREAGRKKDAMIAKYQAWYNKLR 344 ++MRL+ +KTLGDENA L+++VED R R E + ++ M F+E+Y KF+ L+ AL+ F+ YPS NP N E + L I L L +E+E +K DA + KY+A+Y +++ Sbjct: 398 QIMRLMDSLKTLGDENAALLRRVEDAERARIEAKTAQKAMENFKEEYNAKFQSLKLALKRFQTDYPSCENPVNTSEFTNENHQNDQL---IRKLKADLQKEKEQSKKXDAALKKYEAFYKEVK 517
BLAST of NO12G02440 vs. NCBI_GenBank
Match: XP_009836991.1 (hypothetical protein, variant [Aphanomyces astaci] >ETV73565.1 hypothetical protein, variant [Aphanomyces astaci]) HSP 1 Score: 81.6 bits (200), Expect = 5.800e-12 Identity = 50/136 (36.76%), Postives = 79/136 (58.09%), Query Frame = 0 Query: 216 AMQQDEVMRLLGCMKTLGDENAMLIKQVEDGGRVRQENERLRREMGEFQEQYAKKFRDLRSALEEFRRKYPSENNPTNH-VASARETARVKTLESEIESLIVRLNREREAGRKKDAMIAKYQAWYNKLRQSVVHKK 351 A Q+ E RL+ +KTLG ENA LI+ E R+R+EN+RL M EF+ +Y +KF L+ ALEE+RR+ S +H +A ++ LE++++ L L +A R+KD + +Y+ W+ L+ S K+ Sbjct: 306 AHQKFEANRLMHTIKTLGSENAKLIQDTESMARLREENKRLVHAMDEFKTEYHQKFAVLKRALEEWRRQEASRQTTRSHDLARLELSSSESKLEADMQILRDELAAATDASRQKDVQLQRYETWFKSLKASAKAKQ 441
BLAST of NO12G02440 vs. NCBI_GenBank
Match: XP_009043403.1 (hypothetical protein AURANDRAFT_69387 [Aureococcus anophagefferens] >EGB01898.1 hypothetical protein AURANDRAFT_69387 [Aureococcus anophagefferens]) HSP 1 Score: 74.3 bits (181), Expect = 9.300e-10 Identity = 49/132 (37.12%), Postives = 68/132 (51.52%), Query Frame = 0 Query: 221 EVMRLLGCMKTLGDENAMLIKQVEDGGRVRQENERLRREMGEFQEQYAKKFRDLRSALEEFRRKYPSENNPTN--HVASARETARVKTLESEIESLIVRLNREREAGRKKDAMIAKYQAWYNKLRQSVVHKK 351 E L ++ L NA L+ + +D R E+ ++ EM F+ + +KF LR LE FRR YPS NP N LE+E L RL ER+AGRKKDA+I++Y+ WY L+ S K+ Sbjct: 194 EAAALARAVERLAAANAALVAERDDLRRDNAESRAIKAEMVAFKALFQQKFDALRDRLEAFRRDYPSPANPANATRPGDPDPPKSAVDLEAENRQLRARLGAERDAGRKKDAIISRYEHWYRALKASANSKR 325
BLAST of NO12G02440 vs. NCBI_GenBank
Match: CBJ29209.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 72.8 bits (177), Expect = 2.700e-9 Identity = 37/69 (53.62%), Postives = 49/69 (71.01%), Query Frame = 0 Query: 218 QQDEVMRLLGCMKTLGDENAMLIKQVEDGGRVRQENERLRREMGEFQEQYAKKFRDLRSALEEFRRKYP 287 QQ E+MRLL C+KTLGDEN L+K+ ED +VRQE+E +R EM FQ +Y ++F L+ L+E R YP Sbjct: 395 QQGEIMRLLTCLKTLGDENVSLMKECEDRDKVRQESEAIREEMKRFQLKYHERFTLLKKTLDEVMRSYP 463
BLAST of NO12G02440 vs. NCBI_GenBank
Match: XP_009836990.1 (hypothetical protein H257_11690 [Aphanomyces astaci] >ETV73564.1 hypothetical protein H257_11690 [Aphanomyces astaci]) HSP 1 Score: 72.4 bits (176), Expect = 3.500e-9 Identity = 50/149 (33.56%), Postives = 79/149 (53.02%), Query Frame = 0 Query: 216 AMQQDEVMRLLGCMKTLGDENAMLI-------------KQVEDGGRVRQENERLRREMGEFQEQYAKKFRDLRSALEEFRRKYPSENNPTNH-VASARETARVKTLESEIESLIVRLNREREAGRKKDAMIAKYQAWYNKLRQSVVHKK 351 A Q+ E RL+ +KTLG ENA LI + E R+R+EN+RL M EF+ +Y +KF L+ ALEE+RR+ S +H +A ++ LE++++ L L +A R+KD + +Y+ W+ L+ S K+ Sbjct: 306 AHQKFEANRLMHTIKTLGSENAKLIQVCPRRYINSNVWQDTESMARLREENKRLVHAMDEFKTEYHQKFAVLKRALEEWRRQEASRQTTRSHDLARLELSSSESKLEADMQILRDELAAATDASRQKDVQLQRYETWFKSLKASAKAKQ 454
BLAST of NO12G02440 vs. NCBI_GenBank
Match: OQR85490.1 (hypothetical protein ACHHYP_11763 [Achlya hypogyna]) HSP 1 Score: 70.1 bits (170), Expect = 1.700e-8 Identity = 48/144 (33.33%), Postives = 76/144 (52.78%), Query Frame = 0 Query: 211 LEGVEAMQQDEVMRLLGCMKTLGDENAMLIKQVEDGGRVRQENERLRREMGEFQEQYAKKFRDLRSALEEFRRKYPSENNPTNHVASARETARVKTLESEIESLIVRLNREREA----GRKKDAMIAKYQAWYNKLRQSVVHKK 351 L+ A Q+ E+ RL +KTL ENA L ++ +D +R+EN+RL + M F+ +Y +KF L+ ALEE+RR+ R A+ + E L+ L E +A ++KDA + KY+AW+ L+ S K+ Sbjct: 264 LKATLAQQKHELARLTHTVKTLSAENAKLRQEAQDTAGLREENQRLAQSMESFKLEYNQKFLVLKRALEEWRRQ------------QQRHEAKPAAMNIEDSQLVASLRAELDAAHASAQEKDAQLKKYEAWFTSLKASARAKQ 395
BLAST of NO12G02440 vs. NCBI_GenBank
Match: XP_002178943.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC49641.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 69.3 bits (168), Expect = 3.000e-8 Identity = 42/134 (31.34%), Postives = 75/134 (55.97%), Query Frame = 0 Query: 213 GVEAMQQDEVMRLLGCMKTLGDENAMLIKQVEDGGRVRQENERLRREMGEFQEQYAKKFRDLRSALEEFRRKYPSEN-NP--TNHVASARETARVKTLESEIESLIVRLNREREAGRKKDAMIAKYQAWYNKLR 344 G + ++MRL+ +K LGDENA+L+++VE R E + ++++M F+E+Y +F L+ LE FR+ S NP + + V+ E I L L +E+E ++KDA + KY+++Y +++ Sbjct: 538 GNQPANTKQLMRLMDSLKALGDENAVLMREVEGAEAARTEAKVVKQQMQHFKEEYRLRFDKLKETLERFRKGQTSHGLNPVLASEFGKTANSETVQQQEGLIRKLTADLQKEKEESKRKDAALKKYESFYLEVK 671
BLAST of NO12G02440 vs. NCBI_GenBank
Match: OQR96647.1 (hypothetical protein THRCLA_07217 [Thraustotheca clavata]) HSP 1 Score: 67.4 bits (163), Expect = 1.100e-7 Identity = 46/144 (31.94%), Postives = 73/144 (50.69%), Query Frame = 0 Query: 211 LEGVEAMQQDEVMRLLGCMKTLGDENAMLIKQVEDGGRVRQENERLRREMGEFQEQYAKKFRDLRSALEEFRRKYPSENNPTNHVASARETARVKTLESEIESLIVRLNREREAGRK----KDAMIAKYQAWYNKLRQSVVHKK 351 L Q+ E+ RL +KTL EN L + V + +EN+RL M EF+ +Y +KF L+ ALEE+RR+ R ++ + E++ ++I L E EA + KDA + KY++W+N L+ S K+ Sbjct: 272 LRATITQQKHEIARLTHTVKTLTAENTKLHQDVAKNSHIAEENKRLMHSMEEFKVEYNQKFLVLKRALEEWRRQ------------QLRHDSKPQIRETDDSAMIAELKAELEAAHQEALHKDAQLKKYESWFNSLKASAKAKQ 403 The following BLAST results are available for this feature:
BLAST of NO12G02440 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 12
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO12G02440 ID=NO12G02440|Name=NO12G02440|organism=Nannochloropsis oceanica|type=gene|length=2266bpback to top protein sequence of NO12G02440.1 >NO12G02440.1-protein ID=NO12G02440.1-protein|Name=NO12G02440.1|organism=Nannochloropsis oceanica|type=polypeptide|length=394bpback to top Synonyms
Publications
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