NO12G02400, NO12G02400 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO12G02400 vs. NCBI_GenBank
Match: EWM25822.1 (phosphoadenosine phosphosulfate reductase [Nannochloropsis gaditana]) HSP 1 Score: 553.9 bits (1426), Expect = 6.400e-154 Identity = 267/306 (87.25%), Postives = 278/306 (90.85%), Query Frame = 0 Query: 326 MKGAAVMLLAAGLSVASAFV-PTVPHVALTAGRQHGVVSMGLNAELTKTYPRDFKNIPTGTSYGKGEDAKLNKEIENQMQEYLEKQLMSVLKTTADIKKKPVFTTALIAGDCVILDAIAKAGLLDKIDIVFIDTFFLFPETLDFLREVEAHYGFKAKMYHCADCPTQEAFYDKYGADYWMEDIDQYDFKCKVEPLQRALKESGTDAWINGRRRDHGAERASLPVWEGDKVNPIAFWTFEDCWTYLRKHNVPYHPLHDVGFSSLGDMQSTAKVPLEKWMTYGGERSGRFQGLTNKDGSAKTECGIHT 631 MK V LLA GLS A+AFV PT P A+ RQ G+VSMGLNAELTKTYPRDFKNIP GTSYGKGED+ LNKEIE Q E+LE QL SVLK +IKKKP+FTTALIAGDCV+LD IAKAGLLDKI+IVFIDTFFLFPETLDFLREVE HYGFKAK+YHCADCPTQE+FYDKYGADYWMEDIDQYDFKCKVEPLQRALKESGTDAWINGRRRDHGAERASLPVWEGDKVNPIAFWTFEDCW YLRKHNVPYHPLHDVGFSSLGDMQSTAKVPLEKWMTY GERSGRFQGLTNKDGSAKTECGIHT Sbjct: 1 MKTTVVALLATGLSAATAFVLPTGPQPAVKLNRQQGLVSMGLNAELTKTYPRDFKNIPVGTSYGKGEDSTLNKEIEQQTLEFLEGQLSSVLKKAVEIKKKPLFTTALIAGDCVLLDGIAKAGLLDKIEIVFIDTFFLFPETLDFLREVEEHYGFKAKVYHCADCPTQESFYDKYGADYWMEDIDQYDFKCKVEPLQRALKESGTDAWINGRRRDHGAERASLPVWEGDKVNPIAFWTFEDCWNYLRKHNVPYHPLHDVGFSSLGDMQSTAKVPLEKWMTYAGERSGRFQGLTNKDGSAKTECGIHT 306
BLAST of NO12G02400 vs. NCBI_GenBank
Match: CBJ31693.1 (Phosphoadenylyl-sulfate reductase (thioredoxin) [Ectocarpus siliculosus]) HSP 1 Score: 444.9 bits (1143), Expect = 4.200e-121 Identity = 214/310 (69.03%), Postives = 240/310 (77.42%), Query Frame = 0 Query: 329 AAVMLLAAGLSVASAFVPTVPHV--------ALTAGRQHGVVSMGLNAELTKTYPRDFKNIPTGTSYGKGEDAKLNKEIENQMQEYLEKQLMSVLKTTADIKKKPVFTTALIAGDCVILDAIAKAGLLDKIDIVFIDTFFLFPETLDFLREVEAHYGFKAKMYHCADCPTQEAFYDKYGADYWMEDIDQYDFKCKVEPLQRALKESGTDAWINGRRRDHGAERASLPVWEGDKVNPIAFWTFEDCWTYLRKHNVPYHPLHDVGFSSLGDMQSTAKVPLEKWMTYGGERSGRFQGLTNKDGSAKTECGIHT 631 A + LLAAG A AFVP P + + T+ QH V MGLN EL +PRDF IP GT YG+G+DA++NK E LE QL KK P+FTTALIAGDCVILDAIAKAGLLDKI +VF+DT+FLFPE+LDFL EVE HYGFKA +YHC DC TQ+ FYDKYG DYWMEDIDQYD KCKVEPL RALKE+ T+AWINGRRRDHG ERA+LPVWEG K NP++FW+FEDCWTYLRKHNVPYHPLHDVGFSSLGDMQST KVPLE W +YGGERSGRF+G+ NKDGS KTECGIH+ Sbjct: 6 AFLSLLAAG---ADAFVPAAPVLSTRAAASSSATSAVQHVPVRMGLNPELAANFPRDFATIPKGTDYGEGKDAEMNKLFEEVRMSNLESQLADSFAKLVAEKKNPIFTTALIAGDCVILDAIAKAGLLDKIKVVFVDTYFLFPESLDFLHEVEEHYGFKASIYHCVDCETQQDFYDKYGEDYWMEDIDQYDKKCKVEPLMRALKEAETEAWINGRRRDHGFERAALPVWEGTKFNPLSFWSFEDCWTYLRKHNVPYHPLHDVGFSSLGDMQSTRKVPLENWFSYGGERSGRFEGMKNKDGSEKTECGIHS 312
BLAST of NO12G02400 vs. NCBI_GenBank
Match: XP_005830782.1 (hypothetical protein GUITHDRAFT_95252, partial [Guillardia theta CCMP2712] >EKX43802.1 hypothetical protein GUITHDRAFT_95252, partial [Guillardia theta CCMP2712]) HSP 1 Score: 292.4 bits (747), Expect = 3.500e-75 Identity = 141/226 (62.39%), Postives = 166/226 (73.45%), Query Frame = 0 Query: 405 EYLEKQLMSVLKTTADIKKKPVFTTALIAGDCVILDAIAKAGLLDKIDIVFIDTFFLFPETLDFLREVEAHYGFKAKMYHCADCPTQEAFYDKYGADYWMEDIDQYDFKCKVEPLQRALKESGTDAWINGRRRDHGAERASLPVWEGDKVNPIAFWTFEDCWTYLRKHNVPYHPLHDVGFSSLGDMQSTAKVPLEKWMTYGGERSGRFQGLTNKDGSAKTECGIHT 631 +YLE+Q + L + PVFTTALIAGD VIL + K+GLL K+ IVFIDT LFPETL+FL +VE YGFKA +Y C T+E F +KYG D ++EDI+ YD KVEPL RAL+ES T WINGRRRD G ERA+L VWE +K+NPIAFWTFEDCW Y+ +H VPYHPLHD G+ SLGDM ST +V EKW YG ER+GRFQ + N DGS KTECGIHT Sbjct: 76 KYLEQQAIDDLILAVAKYENPVFTTALIAGDDVILHILHKSGLLPKVKIVFIDTLHLFPETLEFLEKVEKFYGFKAVIYKAEGCETREEFDEKYGDDIFIEDIETYDKVAKVEPLLRALRESKTKLWINGRRRDQGFERAALEVWEKEKMNPIAFWTFEDCWKYIEQHKVPYHPLHDDGYPSLGDMHSTLRVEKEKWFLYGMERAGRFQNMQNPDGSDKTECGIHT 301
BLAST of NO12G02400 vs. NCBI_GenBank
Match: CAD32963.1 (phosphoadenosine-phosphosulphate reductase [Physcomitrella patens]) HSP 1 Score: 284.3 bits (726), Expect = 9.500e-73 Identity = 141/254 (55.51%), Postives = 175/254 (68.90%), Query Frame = 0 Query: 381 IPTGTSYGKGEDAKLNKEIENQMQEYLEKQLMSVLKTTADIKKKPVFTTALIAGDCVILDAIAKAGLL--DKIDIVFIDTFFLFPETLDFLREVEAHYGFKAKMYHCADCPTQEAFYDKYGADYWMEDIDQYDFKCKVEPLQRALKESGTDAWINGRRRDHGAERASLPVWEGD---KVNPIAFWTFEDCWTYLRKHNVPYHPLHDVGFSSLGDMQSTAKVPLEKWMTYGGERSGRFQGLTNKDGSAKTECGIH 630 +P TS + K N++ + ++LE Q + L+ T + +KP F ALIAGD VILD + + G +K+ I+FIDTF LFPET FL EVE YGFKA ++H AD +EA+ K+G+D ++ DI++YD CKVEP RALK DA INGRRRDHGAERA L V+E KV P+A+W F DCW YL K+++PYHPLHD GF S+GD+QST VP EKW Y GERSGRFQGLTN DGSAKTECGIH Sbjct: 68 VPVTTSGSSIDIKKCNEQARDARLQHLEAQALETLQKTVENFEKPAFPCALIAGDVVILDLLHRIGAFSDNKVKIIFIDTFHLFPETYKFLSEVEERYGFKAHVFHAADVNNKEAYDAKFGSDLFITDIEEYDRICKVEPFSRALKTLEVDAMINGRRRDHGAERAHLEVFEEGKMVKVQPLAYWEFRDCWDYLTKYSLPYHPLHDQGFPSIGDVQSTIPVPREKWFEYAGERSGRFQGLTNPDGSAKTECGIH 321
BLAST of NO12G02400 vs. NCBI_GenBank
Match: 4BWV_A (Chain A, Structure Of Adenosine 5-prime-phosphosulfate Reductase Apr-b From Physcomitrella Patens >4BWV_B Chain B, Structure Of Adenosine 5-prime-phosphosulfate Reductase Apr-b From Physcomitrella Patens) HSP 1 Score: 284.3 bits (726), Expect = 9.500e-73 Identity = 141/254 (55.51%), Postives = 175/254 (68.90%), Query Frame = 0 Query: 381 IPTGTSYGKGEDAKLNKEIENQMQEYLEKQLMSVLKTTADIKKKPVFTTALIAGDCVILDAIAKAGLL--DKIDIVFIDTFFLFPETLDFLREVEAHYGFKAKMYHCADCPTQEAFYDKYGADYWMEDIDQYDFKCKVEPLQRALKESGTDAWINGRRRDHGAERASLPVWEGD---KVNPIAFWTFEDCWTYLRKHNVPYHPLHDVGFSSLGDMQSTAKVPLEKWMTYGGERSGRFQGLTNKDGSAKTECGIH 630 +P TS + K N++ + ++LE Q + L+ T + +KP F ALIAGD VILD + + G +K+ I+FIDTF LFPET FL EVE YGFKA ++H AD +EA+ K+G+D ++ DI++YD CKVEP RALK DA INGRRRDHGAERA L V+E KV P+A+W F DCW YL K+++PYHPLHD GF S+GD+QST VP EKW Y GERSGRFQGLTN DGSAKTECGIH Sbjct: 25 VPVTTSGSSIDIKKCNEQARDARLQHLEAQALETLQKTVENFEKPAFPCALIAGDVVILDLLHRIGAFSDNKVKIIFIDTFHLFPETYKFLSEVEERYGFKAHVFHAADVNNKEAYDAKFGSDLFITDIEEYDRICKVEPFSRALKTLEVDAMINGRRRDHGAERAHLEVFEEGKMVKVQPLAYWEFRDCWDYLTKYSLPYHPLHDQGFPSIGDVQSTIPVPREKWFEYAGERSGRFQGLTNPDGSAKTECGIH 278
BLAST of NO12G02400 vs. NCBI_GenBank
Match: PNR62380.1 (hypothetical protein PHYPA_000804 [Physcomitrella patens]) HSP 1 Score: 284.3 bits (726), Expect = 9.500e-73 Identity = 141/254 (55.51%), Postives = 175/254 (68.90%), Query Frame = 0 Query: 381 IPTGTSYGKGEDAKLNKEIENQMQEYLEKQLMSVLKTTADIKKKPVFTTALIAGDCVILDAIAKAGLL--DKIDIVFIDTFFLFPETLDFLREVEAHYGFKAKMYHCADCPTQEAFYDKYGADYWMEDIDQYDFKCKVEPLQRALKESGTDAWINGRRRDHGAERASLPVWEGD---KVNPIAFWTFEDCWTYLRKHNVPYHPLHDVGFSSLGDMQSTAKVPLEKWMTYGGERSGRFQGLTNKDGSAKTECGIH 630 +P TS + K N++ + ++LE Q + L+ T + +KP F ALIAGD VILD + + G +K+ I+FIDTF LFPET FL EVE YGFKA ++H AD +EA+ K+G+D ++ DI++YD CKVEP RALK DA INGRRRDHGAERA L V+E KV P+A+W F DCW YL K+++PYHPLHD GF S+GD+QST VP EKW Y GERSGRFQGLTN DGSAKTECGIH Sbjct: 126 VPVTTSGSSIDIKKCNEQARDARLQHLEAQALETLQKTVENFEKPAFPCALIAGDVVILDLLHRIGAFSDNKVKIIFIDTFHLFPETYKFLSEVEERYGFKAHVFHAADVNNKEAYDAKFGSDLFITDIEEYDRICKVEPFSRALKTLEVDAMINGRRRDHGAERAHLEVFEEGKMVKVQPLAYWEFRDCWDYLTKYSLPYHPLHDQGFPSIGDVQSTIPVPREKWFEYAGERSGRFQGLTNPDGSAKTECGIH 379
BLAST of NO12G02400 vs. NCBI_GenBank
Match: XP_024390972.1 (uncharacterized protein LOC112289532 isoform X1 [Physcomitrella patens]) HSP 1 Score: 284.3 bits (726), Expect = 9.500e-73 Identity = 141/254 (55.51%), Postives = 175/254 (68.90%), Query Frame = 0 Query: 381 IPTGTSYGKGEDAKLNKEIENQMQEYLEKQLMSVLKTTADIKKKPVFTTALIAGDCVILDAIAKAGLL--DKIDIVFIDTFFLFPETLDFLREVEAHYGFKAKMYHCADCPTQEAFYDKYGADYWMEDIDQYDFKCKVEPLQRALKESGTDAWINGRRRDHGAERASLPVWEGD---KVNPIAFWTFEDCWTYLRKHNVPYHPLHDVGFSSLGDMQSTAKVPLEKWMTYGGERSGRFQGLTNKDGSAKTECGIH 630 +P TS + K N++ + ++LE Q + L+ T + +KP F ALIAGD VILD + + G +K+ I+FIDTF LFPET FL EVE YGFKA ++H AD +EA+ K+G+D ++ DI++YD CKVEP RALK DA INGRRRDHGAERA L V+E KV P+A+W F DCW YL K+++PYHPLHD GF S+GD+QST VP EKW Y GERSGRFQGLTN DGSAKTECGIH Sbjct: 101 VPVTTSGSSIDIKKCNEQARDARLQHLEAQALETLQKTVENFEKPAFPCALIAGDVVILDLLHRIGAFSDNKVKIIFIDTFHLFPETYKFLSEVEERYGFKAHVFHAADVNNKEAYDAKFGSDLFITDIEEYDRICKVEPFSRALKTLEVDAMINGRRRDHGAERAHLEVFEEGKMVKVQPLAYWEFRDCWDYLTKYSLPYHPLHDQGFPSIGDVQSTIPVPREKWFEYAGERSGRFQGLTNPDGSAKTECGIH 354
BLAST of NO12G02400 vs. NCBI_GenBank
Match: XP_024391828.1 (uncharacterized protein LOC112289532 isoform X2 [Physcomitrella patens]) HSP 1 Score: 284.3 bits (726), Expect = 9.500e-73 Identity = 141/254 (55.51%), Postives = 175/254 (68.90%), Query Frame = 0 Query: 381 IPTGTSYGKGEDAKLNKEIENQMQEYLEKQLMSVLKTTADIKKKPVFTTALIAGDCVILDAIAKAGLL--DKIDIVFIDTFFLFPETLDFLREVEAHYGFKAKMYHCADCPTQEAFYDKYGADYWMEDIDQYDFKCKVEPLQRALKESGTDAWINGRRRDHGAERASLPVWEGD---KVNPIAFWTFEDCWTYLRKHNVPYHPLHDVGFSSLGDMQSTAKVPLEKWMTYGGERSGRFQGLTNKDGSAKTECGIH 630 +P TS + K N++ + ++LE Q + L+ T + +KP F ALIAGD VILD + + G +K+ I+FIDTF LFPET FL EVE YGFKA ++H AD +EA+ K+G+D ++ DI++YD CKVEP RALK DA INGRRRDHGAERA L V+E KV P+A+W F DCW YL K+++PYHPLHD GF S+GD+QST VP EKW Y GERSGRFQGLTN DGSAKTECGIH Sbjct: 45 VPVTTSGSSIDIKKCNEQARDARLQHLEAQALETLQKTVENFEKPAFPCALIAGDVVILDLLHRIGAFSDNKVKIIFIDTFHLFPETYKFLSEVEERYGFKAHVFHAADVNNKEAYDAKFGSDLFITDIEEYDRICKVEPFSRALKTLEVDAMINGRRRDHGAERAHLEVFEEGKMVKVQPLAYWEFRDCWDYLTKYSLPYHPLHDQGFPSIGDVQSTIPVPREKWFEYAGERSGRFQGLTNPDGSAKTECGIH 298
BLAST of NO12G02400 vs. NCBI_GenBank
Match: XP_002961179.1 (probable phosphoadenosine phosphosulfate reductase [Selaginella moellendorffii] >EFJ38718.1 hypothetical protein SELMODRAFT_270214 [Selaginella moellendorffii]) HSP 1 Score: 282.7 bits (722), Expect = 2.800e-72 Identity = 136/242 (56.20%), Postives = 172/242 (71.07%), Query Frame = 0 Query: 396 NKEIENQMQEYLEKQLMSVLKTTADIKKKPVFTTALIAGDCVILDAIAKAGLLDK--IDIVFIDTFFLFPETLDFLREVEAHYGFKAKMYHCADCPTQEAFYDKYGADYWMEDIDQYDFKCKVEPLQRALKESGTDAWINGRRRDHGAERASLPVWEGDK---VNPIAFWTFEDCWTYLRKHNVPYHPLHDVGFSSLGDMQSTAKVPLEKWMTYGGERSGRFQGLTNKDGSAKTECGIHTNK 633 N E ++LE Q SVL+ T + ++P F ALIAGD V+LD + K G +K + ++FIDTF LFPET FL+ +E YGFKA+++H AD T+E + K+G+D ++ DID+YD CKVEP RAL DA INGRRRDHGAERA L V + K V P+A+W F DCW+YL+K++VPYHPLHD G+ S+GD+QST VP EKW YGGERSGRFQGL+NKDGS KTECGIH+ K Sbjct: 70 NDEAYEARLQHLESQAKSVLQKTIECFERPAFPCALIAGDVVMLDLLHKIGAFEKEAVKVIFIDTFHLFPETYTFLKSLEDKYGFKARVFHAADFNTKEEYLAKHGSDLYIRDIDEYDKICKVEPFNRALSSLQVDAMINGRRRDHGAERAHLEVAQAGKMVNVQPLAYWEFRDCWSYLKKNSVPYHPLHDKGYPSIGDVQSTLPVPKEKWFEYGGERSGRFQGLSNKDGSLKTECGIHSQK 311
BLAST of NO12G02400 vs. NCBI_GenBank
Match: XP_002966827.1 (uncharacterized protein LOC9631652 [Selaginella moellendorffii] >EFJ31426.1 hypothetical protein SELMODRAFT_270602 [Selaginella moellendorffii]) HSP 1 Score: 281.6 bits (719), Expect = 6.100e-72 Identity = 136/242 (56.20%), Postives = 171/242 (70.66%), Query Frame = 0 Query: 396 NKEIENQMQEYLEKQLMSVLKTTADIKKKPVFTTALIAGDCVILDAIAKAGLLDK--IDIVFIDTFFLFPETLDFLREVEAHYGFKAKMYHCADCPTQEAFYDKYGADYWMEDIDQYDFKCKVEPLQRALKESGTDAWINGRRRDHGAERASLPVWEGDK---VNPIAFWTFEDCWTYLRKHNVPYHPLHDVGFSSLGDMQSTAKVPLEKWMTYGGERSGRFQGLTNKDGSAKTECGIHTNK 633 N E ++LE Q SVL+ T + ++P F ALIAGD V+LD + K G +K + ++FIDTF LFPET FL+ +E Y FKA+++H AD T+E + K+G+D ++ +ID+YD CKVEP RAL DA INGRRRDHGAERA L V + K V P+A+W F DCW+YL+K++VPYHPLHD G+ S+GD+QST VP EKW YGGERSGRFQGLTNKDGS KTECGIHT K Sbjct: 70 NDEAYEARLQHLESQAKSVLQKTIECFERPAFPCALIAGDVVMLDLLHKIGAFEKEAVKVIFIDTFHLFPETYTFLKSLEDKYDFKARVFHAADFTTKEEYLAKHGSDLYIRNIDEYDKICKVEPFNRALSSLQVDAMINGRRRDHGAERAHLEVAQAGKMVNVQPLAYWEFRDCWSYLKKNSVPYHPLHDKGYPSIGDVQSTLPVPKEKWFEYGGERSGRFQGLTNKDGSLKTECGIHTQK 311 The following BLAST results are available for this feature:
BLAST of NO12G02400 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO12G02400 ID=NO12G02400|Name=NO12G02400|organism=Nannochloropsis oceanica|type=gene|length=2884bpback to top protein sequence of NO12G02400.1 >NO12G02400.1-protein ID=NO12G02400.1-protein|Name=NO12G02400.1|organism=Nannochloropsis oceanica|type=polypeptide|length=633bpback to top Synonyms
Publications
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