NO12G02360, NO12G02360 (gene) Nannochloropsis oceanica

Overview
NameNO12G02360
Unique NameNO12G02360
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length894
Alignment locationchr12:674098..674991 +

Link to JBrowse

Properties
Property NameValue
DescriptionAlpha-ketoglutarate-dependent taurine dioxygenase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr12genomechr12:674098..674991 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR003819Taurine_dOase
Homology
BLAST of NO12G02360 vs. NCBI_GenBank
Match: PKQ03166.1 (taurine dioxygenase [Alphaproteobacteria bacterium HGW-Alphaproteobacteria-12])

HSP 1 Score: 209.5 bits (532), Expect = 1.400e-50
Identity = 111/279 (39.78%), Postives = 162/279 (58.06%), Query Frame = 0
Query:   29 KSFGLRPLTGAMGAELTNLDLRAVSCSSQIADEIRRAFQKYFVLVFRNQVGLSDADLLAIAGLFGEVEARPVVKAQYGLPKVHELVREPGKLGHYGEIWHQDCSYMRHPPLGALLYGVEVPAYGNDTVFCNMELVLQTLSPAFADMLAPLRAVHSA--------FKMVQKDPMATYLAYDNV---DHPVIRTHPETGALALFVNPFFTKHFLGMTDEESRPILQHLFEIMTRSELQCRVRYEKDTLVLWDNRCVGHQAIRDNTRQRRVMRRVEIRGDLP 297
            K+ G++P++GA+GAE+  +DL +   S++  D+I +AF  + V+ FR+Q  +      A    FG +   P VK   G P++ ++V+EP    ++G  WH D S++  P LG++LY  EVP YG DT++ N  L  +TLS     ML  L+A+H+A            ++  M   +A D+    +HPVIRTHPETG  AL+VNP FT+ F+GMT  ESRP+L  LFE  T+ +  CR R+ K+ +  WDNR   H A+ D    RR M RV + GD P
Sbjct:    4 KTIGVKPVSGALGAEIEGVDL-SKELSNETFDDIHQAFLDHVVIFFRDQ-HIGHDRHKAFGRRFGTLNIHPYVKGMDGHPEIMQIVKEPEDRINFGGGWHSDMSFLEEPALGSILYAKEVPPYGGDTLWANQYLAYETLSDGMKKMLDGLKAIHTAKGEYSERGASAQRRKSMDVTVAGDDTPSFEHPVIRTHPETGRKALYVNPAFTEKFVGMTKRESRPLLDFLFEHCTQEQFTCRFRWTKNAIAFWDNRAAQHFALNDYHGHRRHMERVTVNGDRP 280          
BLAST of NO12G02360 vs. NCBI_GenBank
Match: KJS27686.1 (taurine dioxygenase [Hyphomonadaceae bacterium BRH_c29])

HSP 1 Score: 208.0 bits (528), Expect = 4.100e-50
Identity = 109/277 (39.35%), Postives = 155/277 (55.96%), Query Frame = 0
Query:   30 SFGLRPLTGAMGAELTNLDLRAVSCSSQIADEIRRAFQKYFVLVFRNQVGLSDADLLAIAGLFGEVEARPVVKAQYGLPKVHELVREPGKLGHYGEIWHQDCSYMRHPPLGALLYGVEVPAYGNDTVFCNMELVLQTLSPAFADMLAPLRAVHSAFKMVQKD--------PMATYLAYD--NVDHPVIRTHPETGALALFVNPFFTKHFLGMTDEESRPILQHLFEIMTRSELQCRVRYEKDTLVLWDNRCVGHQAIRDNTRQRRVMRRVEIRGDLP 297
            S  ++PLTG +GAE+  +DL+    S+   D + +AF +Y V+V R Q G+S     A A  FG +   P VK     P++ E+++EP +  ++G  WH D S++  P LG++L+ +EVP YG DT+F + +     LSP     L  + A+H+A K    D         M    A D    +HPVIRTHPETG   LF+NP FT  F G + +ESRP+L +LF++       CRVR++   + +WDNRCV H A+ D    RR MRR  I GD P
Sbjct:    2 SMTIQPLTGTLGAEIHGVDLKQ-DLSNAEFDAVHQAFLEYKVIVLRGQQGMSPDQHKAFARRFGTLNIHPYVKGMADHPELLEIIKEPEEKSNFGGGWHSDMSFLEEPALGSILHALEVPPYGGDTLFADQQAAYDRLSPGLKKTLEGMTAIHTASKEYGADGYSAAVRQSMDATAAPDAPEYEHPVIRTHPETGRKGLFINPAFTLRFAGWSRKESRPLLNYLFDLSKEERNTCRVRWQAGDVTMWDNRCVWHYALNDYHGHRRHMRRATIDGDKP 277          
BLAST of NO12G02360 vs. NCBI_GenBank
Match: KJS37261.1 (taurine dioxygenase [Hyphomonas sp. BRH_c22])

HSP 1 Score: 208.0 bits (528), Expect = 4.100e-50
Identity = 112/278 (40.29%), Postives = 155/278 (55.76%), Query Frame = 0
Query:   30 SFGLRPLTGAMGAELTNLDLRAVSCSSQIADEIRRAFQKYFVLVFRNQVGLSDADLLAIAGLFGEVEARPVVKAQYGLPKVHELVREPGKLGHYGEIWHQDCSYMRHPPLGALLYGVEVPAYGNDTVFCNMELVLQTLSPAFADMLAPLRAVHSAFKMVQKD--------PMATYLAYD--NVDHPVIRTHPETGALALFVNPFFTKHFLGMTDEESRPILQHLFEIMTRSELQCRVRYEKDTLVLWDNRCVGHQAIRDNTRQRRVMRRVEIRGDLPR 298
            S  ++PLTG +GAE+  +DL     +S+  D I +AF  + V+V R Q GL+     A A  FG +   P VK   G P++ E+++E  +  ++G  WH D S++  P LG++L+ +EVP YG DT+F + +     LSP     LA + AVH+A K    D         M    A D    +HPVIRTHPETG   LFVNP FT  F G +  ESRP+L +LF++       CRVR++   + +WDNRCV H A+ D    RR MRR  + GD PR
Sbjct:    2 SMTIQPLTGTLGAEIHGVDLTRDLSNSEF-DAIHQAFLDHKVIVLRGQNGLTPDQHKAFAHRFGTLNIHPYVKGMEGHPELLEIIKEKDEKTNFGGGWHSDMSFLEEPALGSILHALEVPPYGGDTLFADQQAAYDRLSPGLQKTLAGMTAVHTASKEYGADGYSAAVRQSMDATAAPDAPEYEHPVIRTHPETGRKGLFVNPAFTLRFAGWSRRESRPLLNYLFDVSKEERNTCRVRWQAGDVTMWDNRCVWHYALNDYHGHRRHMRRATVDGDRPR 278          
BLAST of NO12G02360 vs. NCBI_GenBank
Match: KCZ54280.1 (hypothetical protein HY29_14690 [Hyphomonas beringensis])

HSP 1 Score: 207.2 bits (526), Expect = 6.900e-50
Identity = 107/278 (38.49%), Postives = 153/278 (55.04%), Query Frame = 0
Query:   30 SFGLRPLTGAMGAELTNLDLRAVSCSSQIADEIRRAFQKYFVLVFRNQVGLSDADLLAIAGLFGEVEARPVVKAQYGLPKVHELVREPGKLGHYGEIWHQDCSYMRHPPLGALLYGVEVPAYGNDTVFCNMELVLQTLSPAFADMLAPLRAVHSAFKMVQKDPMATYLAYD----------NVDHPVIRTHPETGALALFVNPFFTKHFLGMTDEESRPILQHLFEIMTRSELQCRVRYEKDTLVLWDNRCVGHQAIRDNTRQRRVMRRVEIRGDLPR 298
            S  ++PLTG +GAE+  +DL+    S    D I +AF  + V+V R Q GL+       A  FG +   P VK   G P++ E+++EP +  ++G  WH D S++  P LG++L+ ++VP YG DT+F + +     LSP     L  + AVH+A K    D  +  +               +HPVIRTHPETG   LF+NP FT  F G + +ESRP+L +LF++       CRVR++   + +WDNRCV H A+ D    RR MRR  I GD PR
Sbjct:   35 SMTIQPLTGTLGAEIHGVDLKQ-DLSDAEFDAIHQAFLDHKVIVLRGQQGLTPDQQKDFARRFGTLNIHPYVKGMDGHPELLEIIKEPDEKTNFGGGWHSDMSFLEEPALGSILHAIDVPPYGGDTLFADQQAAYDRLSPGLKKTLEGMTAVHTASKEYGADGYSAAVRQSMDAKSAPDAPEYEHPVIRTHPETGRKGLFINPAFTLRFAGWSRKESRPLLAYLFDVSKEERNTCRVRWQAGDVTMWDNRCVWHYALNDYHGHRRHMRRATINGDKPR 311          
BLAST of NO12G02360 vs. NCBI_GenBank
Match: WP_034796376.1 (taurine dioxygenase [Hyphomonas beringensis])

HSP 1 Score: 207.2 bits (526), Expect = 6.900e-50
Identity = 107/278 (38.49%), Postives = 153/278 (55.04%), Query Frame = 0
Query:   30 SFGLRPLTGAMGAELTNLDLRAVSCSSQIADEIRRAFQKYFVLVFRNQVGLSDADLLAIAGLFGEVEARPVVKAQYGLPKVHELVREPGKLGHYGEIWHQDCSYMRHPPLGALLYGVEVPAYGNDTVFCNMELVLQTLSPAFADMLAPLRAVHSAFKMVQKDPMATYLAYD----------NVDHPVIRTHPETGALALFVNPFFTKHFLGMTDEESRPILQHLFEIMTRSELQCRVRYEKDTLVLWDNRCVGHQAIRDNTRQRRVMRRVEIRGDLPR 298
            S  ++PLTG +GAE+  +DL+    S    D I +AF  + V+V R Q GL+       A  FG +   P VK   G P++ E+++EP +  ++G  WH D S++  P LG++L+ ++VP YG DT+F + +     LSP     L  + AVH+A K    D  +  +               +HPVIRTHPETG   LF+NP FT  F G + +ESRP+L +LF++       CRVR++   + +WDNRCV H A+ D    RR MRR  I GD PR
Sbjct:    2 SMTIQPLTGTLGAEIHGVDLKQ-DLSDAEFDAIHQAFLDHKVIVLRGQQGLTPDQQKDFARRFGTLNIHPYVKGMDGHPELLEIIKEPDEKTNFGGGWHSDMSFLEEPALGSILHAIDVPPYGGDTLFADQQAAYDRLSPGLKKTLEGMTAVHTASKEYGADGYSAAVRQSMDAKSAPDAPEYEHPVIRTHPETGRKGLFINPAFTLRFAGWSRKESRPLLAYLFDVSKEERNTCRVRWQAGDVTMWDNRCVWHYALNDYHGHRRHMRRATINGDKPR 278          
BLAST of NO12G02360 vs. NCBI_GenBank
Match: WP_084420579.1 (taurine dioxygenase [Henriciella litoralis])

HSP 1 Score: 206.1 bits (523), Expect = 1.500e-49
Identity = 106/274 (38.69%), Postives = 157/274 (57.30%), Query Frame = 0
Query:   33 LRPLTGAMGAELTNLDLRAVSCSSQIADEIRRAFQKYFVLVFRNQVGLSDADLLAIAGLFGEVEARPVVKAQYGLPKVHELVREPGKLGHYGEIWHQDCSYMRHPPLGALLYGVEVPAYGNDTVFCNMELVLQTLSPAFADMLAPLRAVHSA--------FKMVQKDPMATYLAYD--NVDHPVIRTHPETGALALFVNPFFTKHFLGMTDEESRPILQHLFEIMTRSELQCRVRYEKDTLVLWDNRCVGHQAIRDNTRQRRVMRRVEIRGDLP 297
            ++P++GA+GAE+  + L A   S++  +++ +AF  + V+ FR Q  L+     A    FG +   P VK     P++ E+++EP +  ++G  WH D S++  P LG++L+ +EVP YG DT++ N  +  +TLS    + L+ L A+HSA           + +  M T  A D    +HPV+RTHPETG  AL+VNP FT  F G T +ESRP+L +LFE   R E  CR R+E  ++  WDNR   H A+ D    RR MRRV + GD P
Sbjct:    7 IKPISGALGAEIAGVSL-ADELSNEAFNKVHQAFLDHHVIFFRGQHDLTPEHHKAFGRRFGTLNVHPYVKGMADHPEIMEIIKEPEEKTNFGGGWHTDMSFLEEPALGSILHAIEVPPYGGDTLWANQHMAYETLSDGLKETLSGLTAIHSAKGEYGPKGQSALGRQSMETSAAPDAPEFEHPVVRTHPETGRKALYVNPAFTMRFKGWTRKESRPLLNYLFEHCQREEFTCRFRWEAGSVAFWDNRSTWHFALNDYQGHRRHMRRVTVDGDRP 279          
BLAST of NO12G02360 vs. NCBI_GenBank
Match: WP_035569238.1 (taurine dioxygenase [Hyphomonas adhaerens] >KCZ84506.1 taurine dioxygenase [Hyphomonas adhaerens MHS-3])

HSP 1 Score: 205.3 bits (521), Expect = 2.600e-49
Identity = 106/275 (38.55%), Postives = 153/275 (55.64%), Query Frame = 0
Query:   33 LRPLTGAMGAELTNLDLRAVSCSSQIADEIRRAFQKYFVLVFRNQVGLSDADLLAIAGLFGEVEARPVVKAQYGLPKVHELVREPGKLGHYGEIWHQDCSYMRHPPLGALLYGVEVPAYGNDTVFCNMELVLQTLSPAFADMLAPLRAVHSAFKMVQKDPMATYLAYD----------NVDHPVIRTHPETGALALFVNPFFTKHFLGMTDEESRPILQHLFEIMTRSELQCRVRYEKDTLVLWDNRCVGHQAIRDNTRQRRVMRRVEIRGDLPR 298
            ++PLTG +GAE+  +DL+    S+   D + +AF  + V+V R Q GL+     A A  FG +   P VK   G P++ E+++EP +  ++G  WH D S++  P LG++L+ +EVP YG DT+F + +     LS      L  + AVH+A K    D  +  +               +HPVIRTHPETG   LF+NP FT  F G + +ESRP+L +LF++       CRVR++   + +WDNRCV H A+ D    RR MRR  I GD PR
Sbjct:    3 IQPLTGTLGAEIHGVDLKQ-DLSNAEFDAVHQAFLDHKVIVLRGQQGLTPDQQKAFARRFGTLNIHPYVKGMDGHPELLEIIKEPDEKTNFGGGWHSDMSFLEEPALGSILHALEVPPYGGDTLFADQQAAYDRLSSGLKKTLEGMTAVHTASKEYGADGYSAAVRQSMDAKSAPDAPEYEHPVIRTHPETGRKGLFINPAFTLRFSGWSRKESRPLLNYLFDLSREERNTCRVRWQAGDVTMWDNRCVWHYALNDYHGHRRHMRRATIDGDRPR 276          
BLAST of NO12G02360 vs. NCBI_GenBank
Match: WP_095380824.1 (taurine dioxygenase [Henriciella pelagia])

HSP 1 Score: 205.3 bits (521), Expect = 2.600e-49
Identity = 106/278 (38.13%), Postives = 155/278 (55.76%), Query Frame = 0
Query:   29 KSFGLRPLTGAMGAELTNLDLRAVSCSSQIADEIRRAFQKYFVLVFRNQVGLSDADLLAIAGLFGEVEARPVVKAQYGLPKVHELVREPGKLGHYGEIWHQDCSYMRHPPLGALLYGVEVPAYGNDTVFCNMELVLQTLSPAFADMLAPLRAVHSA--------FKMVQKDPMATYLAYD--NVDHPVIRTHPETGALALFVNPFFTKHFLGMTDEESRPILQHLFEIMTRSELQCRVRYEKDTLVLWDNRCVGHQAIRDNTRQRRVMRRVEIRGDLP 297
            ++  ++P++GA+GAE+  +DL A   S++  D + RAF  + V+ FR+Q  L+     A    FG +   P VK   G P++ E+++EP +  ++G  WH D S++  P LG++L+ +EVP  G DT++ N  +    LS      L  L A+HSA             +  M T +A D    +HPV+RTHPETG   L+VNP FT HF G T  ESRP+L +LFE   + +  CR R+E  ++  WDNR   H A+ D    RR MRRV + GD P
Sbjct:    3 RTIEVQPISGALGAEIVGVDL-AGELSNEAFDAVHRAFLDHHVIFFRDQNNLTPEKHKAFGRRFGTLNVHPYVKGMDGHPEILEIIKEPEEKTNFGGGWHTDMSFLEEPALGSILHAIEVPPCGGDTLWANQHMAYDALSDGLKQTLGGLTAIHSAKGEYGPKGQSAHNRQSMDTTMAPDAPEFEHPVVRTHPETGRKGLYVNPAFTMHFKGWTRRESRPLLNYLFEHCRQEQFTCRFRWEAGSVAFWDNRSTWHFALNDYQGHRRHMRRVTVNGDRP 279          
BLAST of NO12G02360 vs. NCBI_GenBank
Match: WP_027301204.1 (taurine dioxygenase [Rhodospirillales bacterium URHD0088])

HSP 1 Score: 204.9 bits (520), Expect = 3.400e-49
Identity = 112/285 (39.30%), Postives = 162/285 (56.84%), Query Frame = 0
Query:   26 LAPKSFGLRPLTGAMGAELTNLDLRAVSCSSQIADEIRRAFQKYFVLVFRNQVGLSDADLLAIAGLFGEVEARPVVKAQYGLPKVHELVREPGKLGHYGEIWHQDCSYMRHPPLGALLYGVEVPAYGNDTVFCNMELVLQTLSPAFADMLAPLRAVHSA--------------FKMVQKDPMATYLAYDNVDHPVIRTHPETGALALFVNPFFTKHFLGMTDEESRPILQHLFEIMTRSELQCRVRYEKDTLVLWDNRCVGHQAIRDNTRQRRVMRRVEIRGDLP 297
            +A ++  +RPL GA+GAE+  +DL+     +Q   EI RAF ++ V+VFR+Q  LS  D++A+   FGE    P VK   G P++ E+++E  +  ++G  WH D +Y++ PPLG +LY  E PAYG DT+F N  L  + LS     ML  L  V++A                 ++   +A   A + + HP++RTHPETG  AL++N   T  F  MT+ ES P++Q L +   R E  CRV +   TL +WDNRC  H AI D T QRRVMRR+ +  + P
Sbjct:    1 MAYETIEVRPLAGALGAEIGGVDLKRAQ-GNQTWSEIHRAFLEHVVIVFRDQ-ELSLDDMMAVGRRFGEPSDYPFVKGIDGYPQIFEIIKEAHESKNFGGAWHSDSTYLKQPPLGTMLYATETPAYGGDTLFANQYLAYEALSEGMRAMLDGLVGVNNAGLKSGGGRVNRQGDISSMKTQALAEAAAIEAL-HPIVRTHPETGRKALYLNRSHTIRFQDMTEAESAPLIQLLTDHAVRPEFTCRVGWAPGTLTIWDNRCAQHFAINDYTGQRRVMRRLTVGPETP 282          
BLAST of NO12G02360 vs. NCBI_GenBank
Match: WP_034741095.1 (taurine dioxygenase [Hyphomonas chukchiensis] >KCZ56645.1 hypothetical protein HY30_05900 [Hyphomonas chukchiensis])

HSP 1 Score: 204.1 bits (518), Expect = 5.900e-49
Identity = 103/274 (37.59%), Postives = 152/274 (55.47%), Query Frame = 0
Query:   33 LRPLTGAMGAELTNLDLRAVSCSSQIADEIRRAFQKYFVLVFRNQVGLSDADLLAIAGLFGEVEARPVVKAQYGLPKVHELVREPGKLGHYGEIWHQDCSYMRHPPLGALLYGVEVPAYGNDTVFCNMELVLQTLSPAFADMLAPLRAVHSAFKMVQKDPMATYLAYD----------NVDHPVIRTHPETGALALFVNPFFTKHFLGMTDEESRPILQHLFEIMTRSELQCRVRYEKDTLVLWDNRCVGHQAIRDNTRQRRVMRRVEIRGDLP 297
            ++PLTG +GA +   DL +   S+   D I +AF  + V+V R Q GL+     A A  FG +   P VK  +G P++ E+++EP +  ++G  WH D S++  P LG++L+ +EVP YG DT+F + +     LSP     L  + A+H+A K    D  +  +               +HPVIRTHPETG   LF+NP FT  F G + +ESRP+L +LF++       CRV+++   + +WDNRCV H A+ D    RR MRR  + GD P
Sbjct:    5 IQPLTGTLGAVIHGADLTS-DLSNADFDAIHQAFLDHKVIVLRGQNGLTPERQKAFARRFGTLNIHPYVKGMHGHPELLEIIKEPEEKTNFGGGWHSDMSFLEEPALGSILHAIEVPPYGGDTLFADQQAAYDRLSPGLQKTLGTMTAIHTASKEYGADGYSAAVRQSMDAKAAPEAPEYEHPVIRTHPETGRKGLFINPAFTLRFAGWSRKESRPLLNYLFDVSKEERNTCRVQWQAGDVTMWDNRCVWHYALNDYHGHRRHMRRATVDGDRP 277          
The following BLAST results are available for this feature:
BLAST of NO12G02360 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
PKQ03166.11.400e-5039.78taurine dioxygenase [Alphaproteobacteria bacterium... [more]
KJS27686.14.100e-5039.35taurine dioxygenase [Hyphomonadaceae bacterium BRH... [more]
KJS37261.14.100e-5040.29taurine dioxygenase [Hyphomonas sp. BRH_c22][more]
KCZ54280.16.900e-5038.49hypothetical protein HY29_14690 [Hyphomonas bering... [more]
WP_034796376.16.900e-5038.49taurine dioxygenase [Hyphomonas beringensis][more]
WP_084420579.11.500e-4938.69taurine dioxygenase [Henriciella litoralis][more]
WP_035569238.12.600e-4938.55taurine dioxygenase [Hyphomonas adhaerens] >KCZ845... [more]
WP_095380824.12.600e-4938.13taurine dioxygenase [Henriciella pelagia][more]
WP_027301204.13.400e-4939.30taurine dioxygenase [Rhodospirillales bacterium UR... [more]
WP_034741095.15.900e-4937.59taurine dioxygenase [Hyphomonas chukchiensis] >KCZ... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL125nonsL125Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL124nonsL124Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR015ncniR015Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR014ncniR014Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR007ngnoR007Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR006ngnoR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010169NSK010169Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO12G02360.1NO12G02360.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|592418gene_5400Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100021g64gene4719Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO12G02360.1NO12G02360.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO12G02360 ID=NO12G02360|Name=NO12G02360|organism=Nannochloropsis oceanica|type=gene|length=894bp
ATGCTATCGTCCTCCTTATCCTCTTTCTCCCTTTTTCCGTCGTCGTCCTC
CTTCTCCTCTATGGCCTCGATCGCGCTCGCCCCCAAGTCTTTCGGTTTAC
GTCCCCTGACAGGCGCCATGGGGGCAGAGCTGACCAACCTAGACCTCCGC
GCAGTGAGTTGTAGCAGCCAAATAGCAGACGAGATCAGACGAGCATTTCA
AAAGTATTTCGTCCTCGTCTTTCGGAACCAGGTAGGCCTGAGCGATGCAG
ACTTGTTGGCCATCGCCGGGCTGTTTGGAGAAGTGGAGGCTCGGCCCGTA
GTCAAAGCGCAGTATGGGCTACCCAAAGTCCATGAGTTGGTGCGGGAGCC
CGGTAAACTCGGGCACTACGGAGAGATCTGGCACCAAGATTGTTCTTACA
TGCGCCACCCTCCTTTGGGTGCGCTCCTTTACGGTGTGGAGGTCCCCGCG
TATGGCAATGACACGGTTTTCTGTAACATGGAATTGGTGCTCCAGACACT
CTCGCCGGCTTTTGCGGACATGCTCGCGCCTTTGCGGGCCGTGCATTCCG
CCTTCAAAATGGTGCAGAAGGATCCAATGGCAACATATTTGGCGTACGAT
AACGTCGATCACCCCGTCATCCGCACACATCCCGAGACCGGTGCCCTCGC
CCTGTTTGTGAATCCCTTCTTCACAAAGCACTTTTTGGGCATGACAGACG
AAGAAAGCCGACCCATACTCCAACATTTGTTCGAGATTATGACCAGGTCC
GAGCTTCAGTGCCGGGTACGATATGAGAAGGATACATTGGTGCTTTGGGA
CAATCGTTGCGTTGGGCATCAGGCAATCAGGGATAATACTCGACAGCGGA
GGGTCATGCGGCGGGTGGAGATTCGCGGGGACCTTCCTAGGTAG
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protein sequence of NO12G02360.1

>NO12G02360.1-protein ID=NO12G02360.1-protein|Name=NO12G02360.1|organism=Nannochloropsis oceanica|type=polypeptide|length=298bp
MLSSSLSSFSLFPSSSSFSSMASIALAPKSFGLRPLTGAMGAELTNLDLR
AVSCSSQIADEIRRAFQKYFVLVFRNQVGLSDADLLAIAGLFGEVEARPV
VKAQYGLPKVHELVREPGKLGHYGEIWHQDCSYMRHPPLGALLYGVEVPA
YGNDTVFCNMELVLQTLSPAFADMLAPLRAVHSAFKMVQKDPMATYLAYD
NVDHPVIRTHPETGALALFVNPFFTKHFLGMTDEESRPILQHLFEIMTRS
ELQCRVRYEKDTLVLWDNRCVGHQAIRDNTRQRRVMRRVEIRGDLPR*
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Synonyms
Publications