NO12G02350, NO12G02350 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO12G02350 vs. NCBI_GenBank
Match: EWM25829.1 (Protein of unknown function DUF4286 [Nannochloropsis gaditana] >EWM25830.1 Protein of unknown function DUF4286 [Nannochloropsis gaditana]) HSP 1 Score: 567.8 bits (1462), Expect = 2.800e-158 Identity = 272/391 (69.57%), Postives = 322/391 (82.35%), Query Frame = 0 Query: 25 TSALTRGANVPQCITKTTTTWPPAHMLKDTGAGYHVLDKLPVPAYPHLALERPYLMQPICLSPPGGEKSKILYEVTLELDEDIFEAYLTWIRMGHIQEVMALPGFVGWQMSVSEDDAAKTNGAKGQKRVVLVETYEVASRETLEEYFTKYAKRIRDDHKRMWDGKFAASRRILHRFGLQTETEANLWKQRDGKNAFRLKNLQEQLARVPRFTADGLKLQALPTPLWEKLQEYYKAHRHESVEDRLDPAEISINTWVAPTLRLDLPPALATEVVGTLKPILEEWSGISELESTGISGIRTYLPGATIAEHVDMATTNVISALINVDQNVSGLWPFEMKDHAGKLHSLHMKPGEVVIYESATCAHQRSHPLPSGGHYTNLFMRFKPKGWTFSY 416 +SA + A+ +C WPP H+ + G +LD + P+YPHLA +RPYL QPI L+ P ++I YEVTLE+DEDI E YL WI+ GHIQEVMALPGFVGW +S SED A + G GQ+RVV VE YEV SRE LE+YF KYA+RIRDDH RMW+GKFAASRRILH FG QT+ EA LWKQRD KN+FRL NL+ Q+ RVPRFT++GLK+QALP+ LWE L+++Y+A RHESVEDRLDP+EISINTWV+PTLRLDLPPALA+EVVGTLKPILE W G++ELESTGISGIRTYLPGATI EHVDMATTNV+SALIN+DQ+V WPFEM+DH+GKLH+LHM+PGEVV+YESATCAH+RS PLP GG+YTNLF+RFKPKGWTF+Y Sbjct: 60 SSAFPQAASTQRC-------WPPPHLSHEDGK-RSILDAMSEPSYPHLA-DRPYLRQPIPLTSPNDPANRIKYEVTLEIDEDIVEGYLAWIQEGHIQEVMALPGFVGWNISASEDSIAASRGIHGQRRVVFVEQYEVESREFLEKYFVKYAQRIRDDHSRMWEGKFAASRRILHTFGRQTDKEAELWKQRDAKNSFRLNNLRYQVDRVPRFTSEGLKVQALPSSLWETLKQFYRARRHESVEDRLDPSEISINTWVSPTLRLDLPPALASEVVGTLKPILESWCGVAELESTGISGIRTYLPGATIQEHVDMATTNVVSALINLDQDVKEPWPFEMRDHSGKLHALHMRPGEVVMYESATCAHRRSRPLPPGGYYTNLFLRFKPKGWTFTY 441
BLAST of NO12G02350 vs. NCBI_GenBank
Match: WP_085759061.1 (hypothetical protein [Oceanicoccus sagamiensis] >ARN74895.1 hypothetical protein BST96_12680 [Oceanicoccus sagamiensis]) HSP 1 Score: 147.1 bits (370), Expect = 1.200e-31 Identity = 71/180 (39.44%), Postives = 115/180 (63.89%), Query Frame = 0 Query: 232 VPRFTADGLKLQALPTPLWEKLQEYYKAHRHESVEDRLDPAEISINTWVAPTLRLDLPPALATEVVGTLKPILEEWSGISELESTGISGIRTYLPGATIAEHVDMATTNVISALINVDQNVSGLWPFEMKDHAGKLHSLHMKPGEVVIYESATCAHQRSHPLPSGGHYTNLFMRFKPKGW 412 +P FT G + +P+ +++K++ +Y++++H ++++L SI P+ L+LP L E++ TL P+ E+WSG +L T I G+R+Y GA ++ HVD T++ISA+INVDQ V+ WP DH G+LH +++KPGE++ YESA H R PL +G ++ NLF+ +P GW Sbjct: 207 IPAFTEIGFEKFQVPSEIYQKIKAFYQSNKHLEIDEKLGKRLTSIKK-NHPSSYLELPDVLRQEMIDTLAPMFEQWSG-QKLLITSIYGVRSYKKGANLSMHVDRYRTHIISAIINVDQAVTKKWPLHAYDHFGRLHRIYLKPGEMIFYESARVPHGRPTPL-NGKNFANLFIHAQPVGW 383
BLAST of NO12G02350 vs. NCBI_GenBank
Match: EWM30492.1 (hypothetical protein Naga_100013g87 [Nannochloropsis gaditana]) HSP 1 Score: 141.0 bits (354), Expect = 8.500e-30 Identity = 71/204 (34.80%), Postives = 114/204 (55.88%), Query Frame = 0 Query: 205 ETEANLWKQRDGKNAFRLKNLQEQLARVPRFTADGLKLQALPTPLWEKLQEYYKAHRHESVEDRLDPAEISINTWVAPTLRLDLPPALATEVVGTLKPILEEWSGISELESTGISGIRTYLPGATIAEHVDMATTNVISALINVDQNVSGLWPFEMKDHAGKLHSLHMKPGEVVIYESATCAHQRSHPLPSGGHYTNLFMRFKP 409 E +A++W+ R N RL+ + Q + V ++T G K +P+ L +L EY H + +++ ++ +N + T + + V TLKPILE W G +L T GIR Y G+ + +HVD+ T+++SA++NV Q+V +WP + DH G+ H ++M PGE+ +YESAT H R+ L G ++ NLF F P Sbjct: 259 ENQADVWRGRQNTNVARLRQNELQPSTVKKYTGGGFKKMLMPSYLHTRLLEYLARHEDQRMDEPWHKDDLHVNFYEKMTTIVYTDRDMRDIVFKTLKPILESWVGGEKLMPTSTYGIRRYYNGSILRDHVDIGRTHIVSAILNVRQDVDEVWPLSILDHQGRRHFINMAPGEMCLYESATALHGRTQAL-RGRYFDNLFAHFAP 461
BLAST of NO12G02350 vs. NCBI_GenBank
Match: XP_005855109.1 (prolyl 4-hydroxylase, partial [Nannochloropsis gaditana CCMP526] >EKU21252.1 prolyl 4-hydroxylase, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 140.2 bits (352), Expect = 1.500e-29 Identity = 71/204 (34.80%), Postives = 113/204 (55.39%), Query Frame = 0 Query: 205 ETEANLWKQRDGKNAFRLKNLQEQLARVPRFTADGLKLQALPTPLWEKLQEYYKAHRHESVEDRLDPAEISINTWVAPTLRLDLPPALATEVVGTLKPILEEWSGISELESTGISGIRTYLPGATIAEHVDMATTNVISALINVDQNVSGLWPFEMKDHAGKLHSLHMKPGEVVIYESATCAHQRSHPLPSGGHYTNLFMRFKP 409 E +A++W+ R N RL+ + Q + V ++T G K +P+ L +L EY H + +++ ++ +N + T + + V TLKPILE W G +L T GIR Y G+ + +HVD+ T+++SA++NV Q+V +WP + DH G+ H + M PGE+ +YESAT H R+ L G ++ NLF F P Sbjct: 249 ENQADVWRGRQNTNVARLRQNELQPSTVKKYTGGGFKKMLMPSYLHTRLLEYLARHEDQRMDEPWHKDDLHVNFYEKMTTIVYTDRDMRDIVFKTLKPILESWVGGEKLMPTSTYGIRRYYNGSILRDHVDIGRTHIVSAILNVRQDVDEVWPLSILDHQGRRHFIDMAPGEMCLYESATALHGRTQAL-RGRYFDNLFAHFAP 451
BLAST of NO12G02350 vs. NCBI_GenBank
Match: WP_101343985.1 (proline hydroxylase [Colwellia echini]) HSP 1 Score: 133.3 bits (334), Expect = 1.800e-27 Identity = 69/187 (36.90%), Postives = 106/187 (56.68%), Query Frame = 0 Query: 232 VPRFTADGLKLQALPTPLWEKLQEYYKAHRHESVEDRLDPAEISIN---------TWVAPTLRLDLPPALATEVVGTLKPILEEWSGISELESTGISGIRTYLPGATIAEHVDMATTNVISALINVDQNVSGLWPFEMKDHAGKLHSLHMKPGEVVIYESATCAHQRSHPLPSGGHYTNLFMRFKPK 410 VP FT G K LP PL++K+ ++Y+ ++H V++ + P + N T + ++L L E+ T+KPILE+WSG +L T + GIR Y GA + H D T++IS ++NVDQ+V WP E++D+ + H + +KPGE++ YE A +H R PL G Y N+F F P+ Sbjct: 297 VPNFTKTGFKKSQLPKPLFDKITQFYQENKHSIVDEHV-PGDFIYNQSNNLNKSKTHKKSSALVELSDTLREEIHNTMKPILEQWSG-QKLAPTYVYGIRVYFDGAVLKMHRDRIETHIISVILNVDQDVKQDWPLEIEDNYYRKHQVMLKPGEMIFYEGARLSHGRPTPL-KGNSYANIFCHFLPQ 480
BLAST of NO12G02350 vs. NCBI_GenBank
Match: ETO11666.1 (hypothetical protein RFI_25710 [Reticulomyxa filosa]) HSP 1 Score: 128.6 bits (322), Expect = 4.400e-26 Identity = 72/189 (38.10%), Postives = 102/189 (53.97%), Query Frame = 0 Query: 222 LKNLQEQLARVPRFTADGLKLQALPTPLWEKLQEYYKAHRHESVEDRLDPAEISINTWVAPTLRLDLPPALATEVVGTLKPILEEWSGISELESTGISGIRTYLPGATIAEHVDMATTNVISALINVDQNV--SGLWPFEMKDHAGKLHSLHMKPGEVVIYESATCAHQRSHPLPSGGHYTNLFMRFKP 409 L +Q +L R FTA G L +++ L +++K + + + A +N +PT LP + + ++P LE W+ I LE T + GIR Y GA + HVD T+VISA+INVD + WP ++ DH G LH MKPG+V+ YESA C H R PLP G +Y N+F+ FKP Sbjct: 16 LNYIQPKLVR--NFTATGFAPSHLDDEIFQALTDFWKTAQEQGDLNEEGAAGPVMNQQKSPTFMAYLPESERQALTDWIRPKLETWANIPSLELTSLYGIRMYTRGAILGMHVDTCGTHVISAIINVDSKLDQGKDWPLQIYDHEGTLHEFTMKPGDVMFYESAKCGHSRFKPLP-GEYYANIFIHFKP 201
BLAST of NO12G02350 vs. NCBI_GenBank
Match: PCJ44858.1 (proline hydroxylase [Alphaproteobacteria bacterium]) HSP 1 Score: 128.6 bits (322), Expect = 4.400e-26 Identity = 71/185 (38.38%), Postives = 107/185 (57.84%), Query Frame = 0 Query: 226 QEQLARVPRFTADGLKLQALPTPLWEKLQEYYKAHRHESVEDRLDPAEISINTWVAP--TLRLDLPPALATEVVGTLKPILEEWSGISELESTGISGIRTYLPGATIAEHVDMATTNVISALINVDQNVSGLWPFEMKDHAGKLHSLHMKPGEVVIYESATCAHQRSHPLPSGGHYTNLFMRFKP 409 +E+ + FT G + LP PL+EKL ++Y +R + VE+ I NT +P + ++L PAL ++ L+P+LE WSGI L+ T + GIR Y G + H D T++ISA+IN+DQ V+ WP ++D+ + H + MKPGE+V YE +H R PL G H+ N+F F+P Sbjct: 287 REENENIANFTRIGFQKDTLPKPLFEKLIKFYHDNRAQQVEETGAKGFIE-NTGASPKSSSLVELTPALQKDIHSCLRPVLELWSGI-RLDPTYVYGIRIYHNGTVLKAHRDRIDTHIISAIINIDQEVNKDWPLYIEDNYYRQHRVMMKPGEIVYYEGGRLSHGRPVPL-DGHHFANIFCHFRP 468
BLAST of NO12G02350 vs. NCBI_GenBank
Match: CBN77694.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 126.7 bits (317), Expect = 1.700e-25 Identity = 73/191 (38.22%), Postives = 107/191 (56.02%), Query Frame = 0 Query: 221 RLKNLQEQLARVPRFTADGLKLQALPTPLWEKLQEYYKAHRHES-VEDRLDPAEISIN-TWVAPTLRLDLPPALATEVVGTLKPILEEWSGISELESTGISGIRTYLPGATIAEHVDMATTNVISALINVDQNVSGLWPFEMKDHAGKLHSLHMKPGEVVIYESATCAHQRSHPLPSGGHYTNLFMRFKPK 410 RL N ++Q +PRFT G K +P +W+ ++ YY+ ++ S + P TW T R + L ++ G L+PILEEWSG+ EL T G+R Y + +A HVD T+ +S ++ VDQ+V WP + DHAG +++ MKP ++V+YESATC H R G +Y N F+ FKPK Sbjct: 269 RLVNNRKQPEGLPRFTEVGFKKITVPDDVWDLVKTYYEENKRRSGLRTTSSPTTWRRRATW--STCREN--GKLKEQIFGGLRPILEEWSGV-ELVQTACYGVRVYTNTSWLANHVDTKATHAVSVIMQVDQDVEEDWPLMIYDHAGNDYNITMKPRDLVLYESATCVHGRPSTF-HGNYYANAFVHFKPK 453
BLAST of NO12G02350 vs. NCBI_GenBank
Match: WP_099475312.1 (proline hydroxylase [Emcibacter sp. ZYL] >PHZ83419.1 proline hydroxylase [Emcibacter sp. ZYL]) HSP 1 Score: 124.8 bits (312), Expect = 6.300e-25 Identity = 69/199 (34.67%), Postives = 112/199 (56.28%), Query Frame = 0 Query: 210 LWKQRDGKNAFRLKNLQEQLARVPRFTADGLKLQALPTPLWEKLQEYYKAHRHESVEDRLDPAEI-SINTWVAPTLRLDLPPALATEVVGTLKPILEEWSGISELESTGISGIRTYLPGATIAEHVDMATTNVISALINVDQNVSGLWPFEMKDHAGKLHSLHMKPGEVVIYESATCAHQRSHPLPSGGHYTNLFMRFK 408 +++ +G AF K L ++ VP +T G + LP PL +K+ ++Y+ + H V + + I + T A + + LP +L E+ LKP+LE WSG+ +LE T + GIR Y G + H D T++I +IN+DQ V+ WP ++D+ + H + ++PG+V+ YE+ AH R P +G YTN+F FK Sbjct: 276 IFRTENGLPAF--KRLDKE--NVPNYTTIGFERDRLPKPLLDKIMDFYRKNFHAQVPETVAERFIKNAKTDTAKSSLIQLPKSLEKEIQACLKPVLEIWSGL-KLEPTFVYGIRVYHHGTALKVHRDRNGTHIIGVIINIDQEVTDPWPLRIEDNYYRKHDIFLEPGDVIYYEATRLAHGRPQPF-NGKLYTNIFSHFK 468
BLAST of NO12G02350 vs. NCBI_GenBank
Match: XP_009034843.1 (hypothetical protein AURANDRAFT_62497 [Aureococcus anophagefferens] >EGB09997.1 hypothetical protein AURANDRAFT_62497 [Aureococcus anophagefferens]) HSP 1 Score: 119.8 bits (299), Expect = 2.000e-23 Identity = 70/195 (35.90%), Postives = 104/195 (53.33%), Query Frame = 0 Query: 228 QLARVPRFTADGLKLQALPTPLWEKLQEYYKAHRHESVEDRLDPAEI----SINTWVAPTLRLDLPPALATEVVGTLKPILEEWSGIS-ELESTGISGIRTYLPGATIAEHVDMATTNVISALINVDQ-NVSGLWPFEMKDHAGKLHSLHMKPGEVVIYESATCAHQRSHPLPSGGHYTNLFMRFKPK-GWTFSY 416 Q+A P TADG KL P +++K+ ++Y A D + I TW P L L V LK ++E+W+ + L+ T G+RTY GA + HVD A T+V+S ++NV Q V WP E+ DHAGKLH+++M+PG+ ++YESA H R P G Y N+F+ + P+ W+ + Sbjct: 314 QIAVTPNVTADGFKLIKTPPHVYDKVIQFYNASHDRIRRPEADGGPLYNQRRIQTWHTP-----LEGRLKAYVFDELKRLMEDWAPTTVPLKGTSAYGVRTYERGAYLHLHVDTANTHVVSGIMNVAQAGVDEPWPLEILDHAGKLHAVNMEPGDFLLYESARLLHGRPRPF-RGDSYANIFVHYMPEHDWSVDF 502 The following BLAST results are available for this feature:
BLAST of NO12G02350 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO12G02350 ID=NO12G02350|Name=NO12G02350|organism=Nannochloropsis oceanica|type=gene|length=1248bpback to top protein sequence of NO12G02350.1 >NO12G02350.1-protein ID=NO12G02350.1-protein|Name=NO12G02350.1|organism=Nannochloropsis oceanica|type=polypeptide|length=416bpback to top Synonyms
Publications
|