NO12G02300, NO12G02300 (gene) Nannochloropsis oceanica

Overview
NameNO12G02300
Unique NameNO12G02300
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2160
Alignment locationchr12:661099..663258 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr12genomechr12:661099..663258 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO12G02300 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL125nonsL125Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL124nonsL124Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR015ncniR015Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR014ncniR014Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR007ngnoR007Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR006ngnoR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO12G02300.1NO12G02300.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO12G02300.1NO12G02300.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO12G02300 ID=NO12G02300|Name=NO12G02300|organism=Nannochloropsis oceanica|type=gene|length=2160bp
ATGGCGGACACCGATCTCATAGCCGCGCTGCCGTGCCCGAAGCTCACCAT
CGAAGCGTCTGTCAGAGTACCGCTAGAGCACCATAATCGTCAGCATGATC
ATCATGACGACGGCGACAATGACGACAATGTCTTTCAGGGATTCGCAAAA
ACTCCTCCGCTGATCTCAGTGCCCGCGGCTCCTATGCGAGTCGAGAGGGA
AGCATTGGAAAAAGATGTATCGCAGGGGTCGGAGAAGGAAGGTGGCCTCC
AACTTCTTGATGCTGCGTCGAACCCCTCCCATCGACAGGATACATCACTA
GGTCCAAACCACAAAGAGGATGAAGCAGTAGGTATTGATATCCTGCTCCC
GCACATGAAGCTTTCGTCATCTCGGGAGGGTGGAAAAGAAGGCGAAGAAG
CTGCAAAGAGTTCTTTGCTTGCACCAATCGACGAAAGTGGGGCTCTCTTA
TTCAATCCCGACCTCCTCCTCGCTGACGTACGAGTATCACCAACAACAAT
GGATAAGGAGGGAGGGGGCGTAACTTCCCTGTCCGAGCCAAGTACATTCC
CGTTGTCTGACCCAATGTCTGCACCGATCAAGGAGCAGGTGATCCAAGAG
GAAGCACTCGAGGCACCAAACAAGGACTTTCCGGAAGATGACGCATCTGG
GAACTTTGCAGCGCTACCAGCCGAGAACGCTGATACCGAGAAGGAAATAG
AGAAAAAGGAAAGGGGAAATCCTGATGCCCTCTTCCTGGAAGTAAAGGTG
TCAAAGATGCAAGGCATTGCACCGCCAGCACCTGTTCTCTCCATGCCGAT
CCGGCCCTTGCGCACCACCACGATTAAGGAGAAGGACGTCAACGATAATT
TCGGTAATTCTGTGCAGGCTGAATTTGTCTTTTCTGTCGCTTCTCCTTCA
GCCCCCGACGCAGTGCCATTGCTTCTTCCCTCGCCGCCCTCTCCTTCATG
CGAGATGCCTCCATCCCCTTCTCCCTCCAAGCGTATAGCCCGGGCTGTGT
TCGAAGAGTGCTTCGGCAGCTTAACAGTTCCAGTGTTGTCCGTAACGGAA
AAGCTCGCGTTGAGGGAGCTTTGCGGTGTGGACTTGCGACAAGGCTTGTG
CCTCGATGCTTTCCAATCGGGGGTCGGGCCTTGTTCGATGACTAATCATG
TGTTGGCTAAGGTGCTCCGGCTCTCAGACAACCGCGTCGGCCGATATCGT
CAACAGGCACATGAGTCGCAGGAGCAAGAGAATGGAAAGAGGCACCCAAT
GCGGGGGGAAGAAGAAGAGGAGGAAGAGAAGGAGAACGCGAAAAGCATCG
TCTGGGCCATTTCATCGCTGGCTCCATCGCGCTTCAATTCGGTTTCACAA
GGACAAGTAATGGATTTCGAGGTTGCGCGTGAGAAGAGAGCAAATAGACT
TGAAAAGGGGGTTAAAAGAAATGATGTCGAGGGACCGGGAGGGGACGATG
AGGAGAAAGGAGGGGGCGAGGTGGACGACGGGGGACAGGAGGCAGTGGAC
GAGAGCTTCGGTAGGGGACTAGTACTGTCTGAAGGGACGACCAACTCGGC
CATGGAGGTCACTCAGGCACTTTCTGTTTCCAGTCCCTCTCTGTCTAGCC
AGCTCGATAACAATATTTTTTTCGGTGGGGTAGGAGGTTGTGGAGAAGGG
GAGAGACGGTGGATGTCCAACTTGAAGCAATCACAACAGGCGGACAAATT
CCCGGTTGACAATGTCATGAGgtaagagcgtgaggtcattttgagctttt
agcgtcatgtgtatgtcctcccagcgatacttaggatgcagattagcgga
ccttgatgtgtcccacacacataccttggttgcatttactcacccggcct
tatgccccttacccactctcatagCCACGCCTTTATTCGGATTGGCCTTG
ATCCGCCTGGCGACGAGGCTACCAAGAGCAGCATGGTATATCCCGATCCT
ATGAATCTGCTGACCAGCGCTACTTCGAAAGCAAATTTCGAACCCAACAA
AGCGCCCCTCTCGGGAGAAGCCCAGGCCGTGATTTTCGGAGCCGTAATTC
CTGACTTCAGCTACATGCTTGCCAAAGTTCCTGTTGTCCCACAGCAAGAT
TCGGCGCCATCAACGAGCACTCAGCTGCAGAACAGTCGAAAAAATAACCT
GGCCGTTTAG
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protein sequence of NO12G02300.1

>NO12G02300.1-protein ID=NO12G02300.1-protein|Name=NO12G02300.1|organism=Nannochloropsis oceanica|type=polypeptide|length=669bp
MADTDLIAALPCPKLTIEASVRVPLEHHNRQHDHHDDGDNDDNVFQGFAK
TPPLISVPAAPMRVEREALEKDVSQGSEKEGGLQLLDAASNPSHRQDTSL
GPNHKEDEAVGIDILLPHMKLSSSREGGKEGEEAAKSSLLAPIDESGALL
FNPDLLLADVRVSPTTMDKEGGGVTSLSEPSTFPLSDPMSAPIKEQVIQE
EALEAPNKDFPEDDASGNFAALPAENADTEKEIEKKERGNPDALFLEVKV
SKMQGIAPPAPVLSMPIRPLRTTTIKEKDVNDNFGNSVQAEFVFSVASPS
APDAVPLLLPSPPSPSCEMPPSPSPSKRIARAVFEECFGSLTVPVLSVTE
KLALRELCGVDLRQGLCLDAFQSGVGPCSMTNHVLAKVLRLSDNRVGRYR
QQAHESQEQENGKRHPMRGEEEEEEEKENAKSIVWAISSLAPSRFNSVSQ
GQVMDFEVAREKRANRLEKGVKRNDVEGPGGDDEEKGGGEVDDGGQEAVD
ESFGRGLVLSEGTTNSAMEVTQALSVSSPSLSSQLDNNIFFGGVGGCGEG
ERRWMSNLKQSQQADKFPVDNVMSHAFIRIGLDPPGDEATKSSMVYPDPM
NLLTSATSKANFEPNKAPLSGEAQAVIFGAVIPDFSYMLAKVPVVPQQDS
APSTSTQLQNSRKNNLAV*
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Synonyms
Publications