NO12G02290, NO12G02290 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO12G02290 vs. NCBI_GenBank
Match: EWM25804.1 (NTP pyrophosphohydrolase MazG, putative catalytic core [Nannochloropsis gaditana]) HSP 1 Score: 271.2 bits (692), Expect = 4.300e-69 Identity = 141/249 (56.63%), Postives = 180/249 (72.29%), Query Frame = 0 Query: 17 TLELFRQSVSCSFPPVSPISIPLLCLDVAQKTGLLAEVLQWKNEDI--CLENDENLRKKVQVTAGGLLVSVLRFSEECEIDLGAAAVAKIDLNGRKYPATLVKGQAHKYDHYSSQTGIKKQGQSIGESLSIFKSPPWEC-IRISRLQAILREFVAEREWGKYHAPRNLLLALVGEMGELCEIVK-TMSGPPASWPRAAKDELAQEVADVFIYLLRFGDVCNIDFREGLVETVAAEAARQIASRKQEKGD 262 ++E RQ+V + +S I I LCLDVA K GLLAE+LQWK+E++ + +D K+Q+ AG LLVS+LR S EIDLGAAAVAKIDLN RKYPA KG AHKYD+Y++QTGIKK+GQS+G IF+ PPW+ + IS LQ L+ FV ER W KYH PRNLLLAL+GE+GELCEIV+ T +G SWP+A K+EL QE+ADVFIYLLRF DVC +D +G+ +A+ A +Q+AS++ D Sbjct: 13 SIEFLRQAVQDTL-KLSIIPITGLCLDVAHKAGLLAEILQWKSEEVTALVYDDIEFCHKMQIAAGELLVSILRLSAHSEIDLGAAAVAKIDLNARKYPAQFCKGLAHKYDYYTAQTGIKKEGQSLGPEDQIFRPPPWDARLTISDLQTSLQAFVLERNWEKYHTPRNLLLALIGEVGELCEIVQATPAGDSRSWPQAFKNELGQEIADVFIYLLRFADVCRLDLAKGMEIAIASGADKQLASKRHVIAD 260
BLAST of NO12G02290 vs. NCBI_GenBank
Match: XP_002291964.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED90815.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 120.2 bits (300), Expect = 1.200e-23 Identity = 69/218 (31.65%), Postives = 107/218 (49.08%), Query Frame = 0 Query: 70 LRKKVQVTAGGLLVSVLRFSEECEIDLGAAAVAKIDLNGRKYPATLVKGQAHKYDHYSSQTGI-KKQGQS-----------IGESLSIFKSPPWECIRISRLQAILREFVAEREWGKYHAPRNLLLALVGEMGELCEI-----------------VKTMSGPP---------ASWPRAAKDELAQEVADVFIYLLRFGDVCNIDFREGLVETVAAEAA 250 LR +V G + + + C+IDL + + K++LNGRKYP L KG++ KY +YSSQTGI K +GQS + S + + + + ++R F ER W ++H PRN++LAL+GE+GEL E+ +++ G P W D++ QEVADV IYL+R D+C++ + V + A Sbjct: 95 LRDEVATQLGMIFIQLFTICNVCDIDLCTSVLKKVELNGRKYPVELCKGKSGKYTNYSSQTGITKSEGQSTIDSPIKDNSDVDVSRNDEDGGEEDTTTVEGITFLIRHFANERLWNRFHTPRNIVLALLGEVGELAELFQWSGDVDKTDESNDNTAESVGGNPFAKQSGLMTIGWTEEEVDKVGQEVADVTIYLIRLADICHVSLAKNAVRLLEERGA 312
BLAST of NO12G02290 vs. NCBI_GenBank
Match: GAX18074.1 (cyclic pyranopterin monophosphate synthase [Fistulifera solaris]) HSP 1 Score: 119.0 bits (297), Expect = 2.700e-23 Identity = 69/168 (41.07%), Postives = 94/168 (55.95%), Query Frame = 0 Query: 81 LLVSVLRFSEECEIDLGAAAVAKIDLNGRKYPATLVKGQAHKYDHYSSQTGI-KKQGQSIGESLSIFKSPPWECIRISRLQAILREFVAEREWGKYHAPRNLLLALVGEMGELCEIVKTMSGPPASWPRAAKDELAQEVADVFIYLLRFGDVCNIDFREGLVETVAAE 248 LL + R ++ +I L A KI LNGRKYP KG+ KY YS TGI K GQS E +++ + + + +LQ+ +R+F A R+W +H PRNL LAL GE+GEL E + + D+L QEVADV IYLLR DVC + L +T +A+ Sbjct: 462 LLQELQRVADSLQIHLAQAIRNKIRLNGRKYPVEQAKGKMSKYTEYSHTTGITKHDGQSTTEFPNVYTAQTTTIVELQQLQSEIRDFAAHRDWDPFHTPRNLCLALGGELGELVEQLFLLEA-------IQTDKLYQEVADVTIYLLRLADVCQLSL---LADTSSAD 619
BLAST of NO12G02290 vs. NCBI_GenBank
Match: GAX23111.1 (cyclic pyranopterin monophosphate synthase [Fistulifera solaris]) HSP 1 Score: 115.5 bits (288), Expect = 3.000e-22 Identity = 66/155 (42.58%), Postives = 88/155 (56.77%), Query Frame = 0 Query: 81 LLVSVLRFSEECEIDLGAAAVAKIDLNGRKYPATLVKGQAHKYDHYSSQTGI-KKQGQSIGESLSIFKSPPWECIRISRLQAILREFVAEREWGKYHAPRNLLLALVGEMGELCEIVKTMSGPPASWPRAAKDELAQEVADVFIYLLRFGDVCNI 235 LL + ++ +I L A KI LNGRKYP KG+ KY YS TGI K GQS E +++ + + + +LQ+ +R+F A+R+W +H PRNL LAL GE+GEL E + A D+L QEVADV IYLLR DVC + Sbjct: 468 LLQQLQLVADSLQIHLAQAIRNKIRLNGRKYPVEQAKGKMSKYTEYSHMTGITKHDGQSTTEFPNVYTAQTTTLVELQQLQSEIRDFAAQRDWDPFHTPRNLCLALGGELGELVEQLFFFDTLQA-------DKLYQEVADVTIYLLRLADVCQL 615
BLAST of NO12G02290 vs. NCBI_GenBank
Match: CBJ31985.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 104.8 bits (260), Expect = 5.300e-19 Identity = 60/156 (38.46%), Postives = 82/156 (52.56%), Query Frame = 0 Query: 74 VQVTAGGLLVSVLRFSEECEIDLGAAAVAKIDLNGRKYPATLVKGQAHKYDHYSSQTGIKK-------QGQSIGESLSIFKSPPWECIRISRLQAILREFVAEREWGKYHAPRNLLLALVGEMGELCEIVK------TMSGPPASWPRAAKDELAQ 217 V + G +L +E+C +DLG + KI LN +KYPA LV+G A KYD Y + TG K +G + LS K W + L+ L+ F ER W K+H PRN+ LAL+GE GEL E+ + G PA W R +D+L+Q Sbjct: 44 VVLELGSAAGCLLLLAEQCNVDLGLSVDLKIKLNAKKYPAVLVRGSALKYDAYKTTTGFAKGSKQDMTEGDDGDDHLSGCKGRAWRPYSLQDLRLQLQNFCTERNWQKFHTPRNICLALMGETGELSELFQFKDEDTCCQGLPA-WSRDDRDKLSQ 198
BLAST of NO12G02290 vs. NCBI_GenBank
Match: EJK47910.1 (hypothetical protein THAOC_33342, partial [Thalassiosira oceanica]) HSP 1 Score: 97.8 bits (242), Expect = 6.500e-17 Identity = 65/200 (32.50%), Postives = 95/200 (47.50%), Query Frame = 0 Query: 79 GGLLVSVLRFSEECEIDLGAAAVAKIDLNGRKYPATLVKGQAHKYDHYSSQTGIKKQGQSIGESLSIFKSPPWECIRISRLQAILREFVAEREWGKYHAPRNLLLALVGEMGELCEIVKTMSG-PPASWPRAAKDELAQEVADVFIYLLRFGDVCNI------DFREGLVETVAAEAARQIASRKQEKGDRETHSEQKKE 272 G + +S+ + I++ KI+LN RKYP L KG+A KY YS QTGI Q + E I + ++R F ER+W ++H PRN+ LAL+GE+GEL E+ + + +D++ QE+AD IYLLR DV ++ D G V E + + Q +G R S E Sbjct: 174 GRVFMSLFTIAANLSINMVDIINRKIELNARKYPVDLCKGKAGKYTKYSDQTGITATNQVTTPTKRKDSDETVEGITL-----LIRTFANERQWNRFHTPRNIALALIGEVGELAELFQWKGDVGELALSEEERDKIGQEIADCAIYLLRLADVSHVCLGQHHDRPGGQVGLHREEPPSLVVVKVQTRGRRPRKSSYAPE 368
BLAST of NO12G02290 vs. NCBI_GenBank
Match: OAE20087.1 (hypothetical protein AXG93_544s1000 [Marchantia polymorpha subsp. ruderalis]) HSP 1 Score: 93.6 bits (231), Expect = 1.200e-15 Identity = 53/171 (30.99%), Postives = 88/171 (51.46%), Query Frame = 0 Query: 84 SVLRFSEECEIDLGAAAVAKIDLNG-RKYPATLVKGQAHKYDHYSSQTGIKKQGQSIGESLSIFKSPPWECIRISRLQAILREFVAEREWGKYHAPRNLLLALVGEMGELCEIVKTMSGPP---ASWPRAAKDELAQEVADVFIYLLRFGDVCNIDFREGLVETVAAEAAR 251 +V R + EC I+L A+ + + R + A V+ H ++ G KK+ ++ S + I LQ + +F ER+W ++H+PRNLLLALVGE+GEL EI + P W + K+ L +E++DV +YL+R D+C +D + + + A + Sbjct: 268 AVARLTFECSIELSASEAFLPEASQVRTFVAVKVEDNE---SHNEAEVGFKKES-------DVYGSCAVGSVTIKELQKRMADFARERDWDQFHSPRNLLLALVGEVGELSEIFQWKGEVPRGLPGWNVSEKEHLGEELSDVLLYLVRLADICEVDLGQAALRKIKKNAKK 428
BLAST of NO12G02290 vs. NCBI_GenBank
Match: XP_012939089.1 (PREDICTED: uncharacterized protein LOC101863442 [Aplysia californica]) HSP 1 Score: 92.8 bits (229), Expect = 2.100e-15 Identity = 75/301 (24.92%), Postives = 118/301 (39.20%), Query Frame = 0 Query: 42 LDVAQKTGLLAEVLQWKNE--DICLENDENLRKKVQVTAGGLLVSVLRFSEECEIDLGAAAVAKIDLNGRKYPATLVKGQAHKYDHYS----------------------------------------------------SQTGIKKQGQSI---------------------GESLSIFKSPPWECIRISRLQAILREFVAEREWGKYHAPRNLLLALVGEMGELCEIVKTMSGPPASWPRAAKDE---LAQEVADVFIYLLRFGDVCNIDFREGLVETVAAEAARQIASRKQEKGDRET 265 LD+ + G LAE+ QWK E + E E RK V +L+ ++ S C IDL A + KI +KYP G+ +KY Y + ++K G + GE+ S + + L+ + EF+ ER W ++H+PRN+LLALVGE+GEL EI + P + E + QE++DV +YLL C+ID + +++ +AA A + R + ++ T Sbjct: 88 LDLVAEVGELAEIFQWKGEVKEGIPEMTEGERKHVGEELSDVLLCLIDLSHRCRIDLTKAVLDKISSIAKKYPKDKAYGRTNKYTDYQLSQNFSLFEKWGDYSYRVKDVFSYSDQAHKEYIVIMSNPTSPKRLKTETENRNTNDVEKTGVGVKADIVDNIDNTLSASAAADGGGETESSGSFRFSDSTSLEDLRKLSMEFIKERNWDQFHSPRNVLLALVGEVGELAEIFQWKGEVSEGLPELTEGEREHVGQELSDVLLYLLDLSQRCHIDLPKAVLKKMAANAKKYPKDRAYGRANKYT 388
BLAST of NO12G02290 vs. NCBI_GenBank
Match: XP_020094600.1 (dCTP pyrophosphatase 1-like [Ananas comosus] >OAY65293.1 dCTP pyrophosphatase 1 [Ananas comosus]) HSP 1 Score: 91.7 bits (226), Expect = 4.700e-15 Identity = 42/105 (40.00%), Postives = 64/105 (60.95%), Query Frame = 0 Query: 154 IRISRLQAILREFVAEREWGKYHAPRNLLLALVGEMGELCEIV----KTMSGPPASWPRAAKDELAQEVADVFIYLLRFGDVCNIDFREGLVETVAAEAARQIAS 255 + + L +L EF ER+W KYH+PRNLLLA+VGE+GEL EI + G P +W + K+ L +E++DV +YL+R D+C+ID + + A + A+ Sbjct: 21 VSLKELSGMLEEFAKERDWEKYHSPRNLLLAMVGEVGELSEIFMWKGEVARGLP-NWKESEKEHLGEELSDVLLYLIRLADICDIDLADAATRKIEKNAVKYPAT 124
BLAST of NO12G02290 vs. NCBI_GenBank
Match: OAY65296.1 (dCTP pyrophosphatase 1 [Ananas comosus]) HSP 1 Score: 90.9 bits (224), Expect = 8.000e-15 Identity = 42/105 (40.00%), Postives = 64/105 (60.95%), Query Frame = 0 Query: 154 IRISRLQAILREFVAEREWGKYHAPRNLLLALVGEMGELCEIV----KTMSGPPASWPRAAKDELAQEVADVFIYLLRFGDVCNIDFREGLVETVAAEAARQIAS 255 + + L +L EF ER+W KYH+PRNLLLA+VGE+GEL EI + G P +W + K+ L +E++DV +YL+R D+C+ID + + A + A+ Sbjct: 21 VSLKELSGMLEEFAKERDWEKYHSPRNLLLAMVGEVGELSEIFMWKGEVARGLP-NWKDSEKEHLGEELSDVLLYLIRLADICDIDLADAATRKIEKNAVKYPAT 124 The following BLAST results are available for this feature:
BLAST of NO12G02290 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO12G02290 ID=NO12G02290|Name=NO12G02290|organism=Nannochloropsis oceanica|type=gene|length=1307bpback to top protein sequence of NO12G02290.1 >NO12G02290.1-protein ID=NO12G02290.1-protein|Name=NO12G02290.1|organism=Nannochloropsis oceanica|type=polypeptide|length=328bpback to top Synonyms
Publications
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