NO12G02280, NO12G02280 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO12G02280 vs. NCBI_GenBank
Match: GBC20201.1 (bromodomain-containing transcription factor [Rhizophagus irregularis DAOM 181602]) HSP 1 Score: 72.8 bits (177), Expect = 1.500e-8 Identity = 41/94 (43.62%), Postives = 54/94 (57.45%), Query Frame = 0 Query: 2016 KECLVVLRQLKAHPAAGPFKEDVKAV--DVPGYSDIVPYPMSLITLETKARRQAYDMSLEKFAEDVSKLWENSALYNGEDHVVTQMALELKVLF 2108 K C L++LK HP+AG F E V V +P Y DI+ PM L T+E+K Y ++ F DV ++ N LYNG DH V+Q A EL+ LF Sbjct: 45 KYCTAALKELKKHPSAGLFLEPVDPVKYGIPDYFDIIKQPMDLGTVESKLNALQY-TTVADFESDVRLIFSNCILYNGVDHPVSQQARELESLF 137
BLAST of NO12G02280 vs. NCBI_GenBank
Match: GBC20202.1 (Bromodomain-containing transcription factor 1 [Rhizophagus irregularis DAOM 181602]) HSP 1 Score: 72.8 bits (177), Expect = 1.500e-8 Identity = 41/94 (43.62%), Postives = 54/94 (57.45%), Query Frame = 0 Query: 2016 KECLVVLRQLKAHPAAGPFKEDVKAV--DVPGYSDIVPYPMSLITLETKARRQAYDMSLEKFAEDVSKLWENSALYNGEDHVVTQMALELKVLF 2108 K C L++LK HP+AG F E V V +P Y DI+ PM L T+E+K Y ++ F DV ++ N LYNG DH V+Q A EL+ LF Sbjct: 45 KYCTAALKELKKHPSAGLFLEPVDPVKYGIPDYFDIIKQPMDLGTVESKLNALQY-TTVADFESDVRLIFSNCILYNGVDHPVSQQARELESLF 137
BLAST of NO12G02280 vs. NCBI_GenBank
Match: PKC67736.1 (Bromodomain-domain-containing protein [Rhizophagus irregularis]) HSP 1 Score: 72.8 bits (177), Expect = 1.500e-8 Identity = 41/94 (43.62%), Postives = 54/94 (57.45%), Query Frame = 0 Query: 2016 KECLVVLRQLKAHPAAGPFKEDVKAV--DVPGYSDIVPYPMSLITLETKARRQAYDMSLEKFAEDVSKLWENSALYNGEDHVVTQMALELKVLF 2108 K C L++LK HP+AG F E V V +P Y DI+ PM L T+E+K Y ++ F DV ++ N LYNG DH V+Q A EL+ LF Sbjct: 45 KYCTAALKELKKHPSAGLFLEPVDPVKYGIPDYFDIIKQPMDLGTVESKLNALQY-TTVADFESDVRLIFSNCILYNGVDHPVSQQARELESLF 137
BLAST of NO12G02280 vs. NCBI_GenBank
Match: PKK64240.1 (Bromodomain-domain-containing protein [Rhizophagus irregularis] >PKY52839.1 Bromodomain-domain-containing protein [Rhizophagus irregularis]) HSP 1 Score: 72.8 bits (177), Expect = 1.500e-8 Identity = 41/94 (43.62%), Postives = 54/94 (57.45%), Query Frame = 0 Query: 2016 KECLVVLRQLKAHPAAGPFKEDVKAV--DVPGYSDIVPYPMSLITLETKARRQAYDMSLEKFAEDVSKLWENSALYNGEDHVVTQMALELKVLF 2108 K C L++LK HP+AG F E V V +P Y DI+ PM L T+E+K Y ++ F DV ++ N LYNG DH V+Q A EL+ LF Sbjct: 45 KYCTAALKELKKHPSAGLFLEPVDPVKYGIPDYFDIIKQPMDLGTVESKLNALQY-TTVADFESDVRLIFSNCILYNGVDHPVSQQARELESLF 137
BLAST of NO12G02280 vs. NCBI_GenBank
Match: XP_001636965.1 (predicted protein [Nematostella vectensis] >EDO44902.1 predicted protein, partial [Nematostella vectensis]) HSP 1 Score: 69.3 bits (168), Expect = 1.600e-7 Identity = 36/97 (37.11%), Postives = 57/97 (58.76%), Query Frame = 0 Query: 2021 VLRQLKAHPAAGPFKEDVKAVDVPGYSDIVPYPMSLITLETKARRQAYDMSLEKFAEDVSKLWENSALYNGEDHVVTQMALELKVLFETWQREMKRR 2118 +LR L++H A PF E V +DVPGY D++ PM L T+E K + Y +LE+F DV+++++N +NG+D + A L+ +F R K + Sbjct: 59 MLRSLQSHKMAWPFLEPVSGLDVPGYYDVIKEPMDLSTVEDKITSKKY-ATLEQFVSDVTRIFDNCRFFNGKDTPYYRCAEVLEAVFVQKLRAWKSK 154
BLAST of NO12G02280 vs. NCBI_GenBank
Match: XP_005855830.1 (hypothetical protein NGA_2094200, partial [Nannochloropsis gaditana CCMP526] >EKU20531.1 hypothetical protein NGA_2094200, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 68.9 bits (167), Expect = 2.100e-7 Identity = 118/530 (22.26%), Postives = 203/530 (38.30%), Query Frame = 0 Query: 1376 AQLEIKKRKRDAQAVIEEALRISGTRTYALGQDRHGRCYWKMPGDETRLYVWIRDAESEGKE---TSIKCRLLPHEQVD------------GMGPGG----CGIWLCYDQREDMHRLV-QYMDTRHPKEAALRAVIEAELLGEPKVKVPRDDAMFVRAGGEVGGVTLEGAEMEV--DATGADDDAKTETTDGVGEGGDAQAD----------ARNEAGVAAAAKPVALKFLEEKNQMPVPPEVLDIEVDPDIWGESLESKAVVRKTRKYHAVVLVDAEDKVWQGRSMGVKFQIFKGGEEVEGSSTPRAHKDNIFWFNVYEFLLPGLYTLRYTVDTFNKDIKPLCLRVEVRARRAPTSVRSVLNGHLSFLNVSRGGRYSLRQSVELDIPEDADEVVGLRIALLQLKETLPAGALLEGPEDLGGSGSSXXXXXXXXXXXGAARASVCIWTDTLQAQWINHLMEAETAQEVMEGLLLLESCLHPEWLKPWFHPLRRAY---AASTTHLLRMGTTPAAVAFHLFILDKALLYDK 1871 A+ ++R+ + +E + RT ALGQDR GR YW+ G+ + L+V D + + +E S L ++ D +G GG WL Y+ E + ++V +Y++ R KE ALR EA L P V+ + GE + E EV + TG + T+ GVG+ + + GV + + E +P P + PD+ ++ S R + ++ W R + + S P K F + V N++ R +A+ PT +R LN S R + D+ E+ + ++ ++ A+L ++ LP G +L+ P++ AR S+ + D +W+ + A TA+E+ME L+LLE + W +P R Y +S H ++ TPA++A ++ LD+ L Y + Sbjct: 141 AEAGARERRLRRKVGVESVAFMGRGRTAALGQDRGGRIYWQFAGEPSFLFVQPYDRQGQSEEGIAGSTDAMALIRQKHDEALAHSVDTGVLALGEGGREGSVEKWLVYESAEAIGKVVEEYLNPRGKKERALR---EAILRQYPDVRKFLRNKRSEEDDGETDNLGTGADENEVGQEETGKETAGATQALWGVGDAVFVEKHGVLWKAHVIFVNPDQGVVRVSYDGWAQADEWIPYVPGPSSLPSPSSSPDMERDAPPSLLPWTALR-------AEEHEEQWGKRQEIARARYV--------SPVPFVEKLRAFPY----------------VTASNRN------RQRSKAKLLPTRLR--YEFRRKALNFSESEE---RMAGMEDVEEEEESLIEVKAAILTVEAALPLGCILDAPDE--------------------ARKSIKLRRDEFN-KWVRRVEMAATARELMECLILLEHSIDSRWR---LNPFRSTYLLCMSSWAHAVKY-ATPASLALRVWSLDRLLDYGR 600
BLAST of NO12G02280 vs. NCBI_GenBank
Match: GAQ81754.1 (histone acetyltransferase [Klebsormidium nitens]) HSP 1 Score: 68.9 bits (167), Expect = 2.100e-7 Identity = 34/87 (39.08%), Postives = 52/87 (59.77%), Query Frame = 0 Query: 2021 VLRQLKAHPAAGPFKEDVKAVDVPGYSDIVPYPMSLITLETKARRQAYDMSLEKFAEDVSKLWENSALYNGEDHVVTQMALELKVLF 2108 VLR + HP A PFKE V A DVP Y DI+ PM L T+ + +AY ++LE F D+ +++ N+ +YN D + + + +L+ F Sbjct: 389 VLRAVGDHPDAWPFKEPVNARDVPDYYDIIKEPMDLKTISRRLDGEAYYVTLEIFNSDMRRVFANARIYNAPDTIYYKASTKLETFF 475
BLAST of NO12G02280 vs. NCBI_GenBank
Match: KZS12476.1 (Uncharacterized protein APZ42_022562 [Daphnia magna]) HSP 1 Score: 68.6 bits (166), Expect = 2.700e-7 Identity = 35/92 (38.04%), Postives = 54/92 (58.70%), Query Frame = 0 Query: 2016 KECLVVLRQLKAHPAAGPFKEDVKAVDVPGYSDIVPYPMSLITLETKARRQAYDMSLEKFAEDVSKLWENSALYNGEDHVVTQMALELKVLF 2108 +E +LRQL+ H ++ PF+E VK DVP Y I+ PM L +ETK + + Y LE F DV+K+++N YN ++ + + A L+ F Sbjct: 2128 EELRKLLRQLQTHKSSWPFREPVKEKDVPDYYQIIKDPMDLRLIETKIQERRYQRLLE-FIGDVTKIFDNCRYYNAKESNIARCATSLEAFF 2218
BLAST of NO12G02280 vs. NCBI_GenBank
Match: EAZ16078.1 (hypothetical protein OsJ_31522 [Oryza sativa Japonica Group]) HSP 1 Score: 68.2 bits (165), Expect = 3.600e-7 Identity = 32/102 (31.37%), Postives = 54/102 (52.94%), Query Frame = 0 Query: 2006 GPIVSVEEFAKECLVVLRQLKAHPAAGPFKEDVKAVDVPGYSDIVPYPMSLITLETKARRQAYDMSLEKFAEDVSKLWENSALYNGEDHVVTQMALELKVLF 2108 G ++ + F K + + + HP A PFKE V + DVP Y DI+ P+ L T+ + + Y ++LE F D+ +++ N+ YN D + + A L+ F Sbjct: 399 GSMIEMATFYKFNIQIFLNMNEHPDAWPFKEPVDSRDVPDYYDIIKDPIDLKTMSKRVESEQYYVTLEMFVADMKRMFSNAKTYNSPDTIYYKCASRLESFF 500
BLAST of NO12G02280 vs. NCBI_GenBank
Match: PRW57082.1 (Swr1 complex bromodomain subunit Brf1 isoform A [Chlorella sorokiniana]) HSP 1 Score: 68.2 bits (165), Expect = 3.600e-7 Identity = 35/77 (45.45%), Postives = 46/77 (59.74%), Query Frame = 0 Query: 2034 FKEDVKAVDVPGYSDIVPYPMSLITLETKARRQAYDMSLEKFAEDVSKLWENSALYNGEDHVVTQMALELKVLFETW 2111 F VKA D PGY D+V PM L T+ K + +Y+++ E F DV ++WEN LYNG DH VT+ A + FE W Sbjct: 2258 FWAPVKADDAPGYFDVVRRPMDLATISDKLKSGSYNVARE-FLADVQQVWENCLLYNGADHQVTRDAAITRRQFEQW 2333 The following BLAST results are available for this feature:
BLAST of NO12G02280 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO12G02280 ID=NO12G02280|Name=NO12G02280|organism=Nannochloropsis oceanica|type=gene|length=13196bpback to top protein sequence of NO12G02280.1 >NO12G02280.1-protein ID=NO12G02280.1-protein|Name=NO12G02280.1|organism=Nannochloropsis oceanica|type=polypeptide|length=2121bpback to top Synonyms
Publications
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