NO12G02230, NO12G02230 (gene) Nannochloropsis oceanica

Overview
NameNO12G02230
Unique NameNO12G02230
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2882
Alignment locationchr12:636464..639345 +

Link to JBrowse

Properties
Property NameValue
DescriptionCell cycle arrest protein BUB3
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr12genomechr12:636464..639345 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR036322WD40_repeat_dom_sf
IPR017986WD40_repeat_dom
IPR001680WD40_repeat
Homology
[Close]
BLAST of NO12G02230 vs. NCBI_GenBank
Match: XP_005853641.1 (cell cycle arrest protein BUB3 [Nannochloropsis gaditana CCMP526] >XP_005856120.1 cell cycle arrest protein BUB3 [Nannochloropsis gaditana CCMP526] >EKU20256.1 cell cycle arrest protein BUB3 [Nannochloropsis gaditana CCMP526] >EKU22722.1 cell cycle arrest protein BUB3 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 589.3 bits (1518), Expect = 1.000e-164
Identity = 279/318 (87.74%), Postives = 300/318 (94.34%), Query Frame = 0 
Query:    1 MEPGSERPLENPAQDGISSLAFSPSSSNLLLISSWDKTARLYDATSNIAKGIWRNHAAVLDCAVQDDHTGFSGGLDRAVRMIYLNRPEDPGLNIGSHAKPVSCMEFSRELGALVTGGWDGHVHVWDPRTQGEARSLPTSEKVFTLAVSGNRIVVGTSDRSVLIYDVRKLNDPEDRRESSLKHQTRCIRISPDNSGYVLASVEGRVAVEYFDPSPAVQAKRYAFKCHRQGDLVFPVNAVAFHPTHGTFATGGCDGMVYTWDGQNKKRLAQLGPYKTSIAALAYNFDGSLLALAASYTYEEGEREHPIDAVYLRCPLEGE 319
            MEPGSER L+NP QDGISSLAFSPSSSNLLL+SSWDKTARLYD +SN+AKGIW+NHAAVLDC VQDDHTGFSGGLDRAVR IYLN+PEDPGLNIGSHA  VSCMEFSRELGALVTGGWDG+VH+WDPR+QG A+SLP SEKVFTLAVSG R+VVGTSDRSVLIYDVRKL+ P+DRRESSLKHQTRCIRI+PD+SGYVLASVEGRVAVEYFD S  VQA+RYAFKCHRQ DLV+PVNAVAFHPTHGTFATGGCD MVYTWDGQNKKRLA LGPYKTSIAAL+YNFDGSL+A+AASYTYEEGE+EHP DAVYLRCPLEGE
Sbjct:    1 MEPGSERLLDNPPQDGISSLAFSPSSSNLLLVSSWDKTARLYDTSSNVAKGIWQNHAAVLDCTVQDDHTGFSGGLDRAVRKIYLNQPEDPGLNIGSHAGEVSCMEFSRELGALVTGGWDGNVHIWDPRSQGRAQSLPPSEKVFTLAVSGQRLVVGTSDRSVLIYDVRKLSAPDDRRESSLKHQTRCIRIAPDHSGYVLASVEGRVAVEYFDLSTEVQAQRYAFKCHRQDDLVYPVNAVAFHPTHGTFATGGCDAMVYTWDGQNKKRLAHLGPYKTSIAALSYNFDGSLMAIAASYTYEEGEKEHPPDAVYLRCPLEGE 318
[Close]
BLAST of NO12G02230 vs. NCBI_GenBank
Match: EWM25818.1 (mitotic checkpoint protein bub3 [Nannochloropsis gaditana])

HSP 1 Score: 587.8 bits (1514), Expect = 3.000e-164
Identity = 278/318 (87.42%), Postives = 300/318 (94.34%), Query Frame = 0 
Query:    1 MEPGSERPLENPAQDGISSLAFSPSSSNLLLISSWDKTARLYDATSNIAKGIWRNHAAVLDCAVQDDHTGFSGGLDRAVRMIYLNRPEDPGLNIGSHAKPVSCMEFSRELGALVTGGWDGHVHVWDPRTQGEARSLPTSEKVFTLAVSGNRIVVGTSDRSVLIYDVRKLNDPEDRRESSLKHQTRCIRISPDNSGYVLASVEGRVAVEYFDPSPAVQAKRYAFKCHRQGDLVFPVNAVAFHPTHGTFATGGCDGMVYTWDGQNKKRLAQLGPYKTSIAALAYNFDGSLLALAASYTYEEGEREHPIDAVYLRCPLEGE 319
            MEPGSER L+NP QDGISSLAFSPSSSNLLL+SSWDKTARLYD +SN+AKGIW+NHAAVLDC VQDDHTGFSGGLDRAVR IYLN+PEDPGLNIGSHA  VSCMEFSRELGALVTGGWDG+VH+WDPR+QG A+SLP SEKVFTLAVSG R+VVGTSDRSVLIYDVRKL+ P+DRRESSLKHQTRCIRI+PD+SGYVLASVEGRVAVEYFD S  VQA+RYAFKCHR+ DLV+PVNAVAFHPTHGTFATGGCD MVYTWDGQNKKRLA LGPYKTSIAAL+YNFDGSL+A+AASYTYEEGE+EHP DAVYLRCPLEGE
Sbjct:    1 MEPGSERLLDNPPQDGISSLAFSPSSSNLLLVSSWDKTARLYDTSSNVAKGIWQNHAAVLDCTVQDDHTGFSGGLDRAVRKIYLNQPEDPGLNIGSHAGEVSCMEFSRELGALVTGGWDGNVHIWDPRSQGRAQSLPPSEKVFTLAVSGQRLVVGTSDRSVLIYDVRKLSAPDDRRESSLKHQTRCIRIAPDHSGYVLASVEGRVAVEYFDLSTEVQAQRYAFKCHRRDDLVYPVNAVAFHPTHGTFATGGCDAMVYTWDGQNKKRLAHLGPYKTSIAALSYNFDGSLMAIAASYTYEEGEKEHPPDAVYLRCPLEGE 318
[Close]
BLAST of NO12G02230 vs. NCBI_GenBank
Match: OWM79169.1 (hypothetical protein CDL15_Pgr003340 [Punica granatum] >PKI71373.1 hypothetical protein CRG98_008232 [Punica granatum])

HSP 1 Score: 352.4 bits (903), Expect = 2.100e-93
Identity = 170/319 (53.29%), Postives = 227/319 (71.16%), Query Frame = 0 
Query:    3 PGSERPLENPAQDGISSLAFSPSSSNLLLISSWDKTARLYDATSNIAKGIWRNHAAVLDCAVQDDHTGFSGGLDRAVRMIYLNRPEDPGLNIGSHAKPVSCMEFSRELGALVTGGWDGHVHVWDPR-TQGEARSL----PTSEKVFTLAVSGNRIVVGTSDRSVLIYDVRKLNDPEDRRESSLKHQTRCIRISPDNSGYVLASVEGRVAVEYFDPSPAVQAKRYAFKCHRQG----DLVFPVNAVAFHPTHGTFATGGCDGMVYTWDGQNKKRLAQLGPYKTSIAALAYNFDGSLLALAASYTYEEGEREHPIDAVYLR 313
            P + R L NP  DG+S+L FS + S+ LL+SSWDKT RLYDA++N+ +G + +  AVLDC   DD +GFS   D  VR +  N  ++  L  G H  PV C+E+S   G ++TG WD  +  WDPR   G+ R+L    P  E++++L++ GNR+VV T+ R V IYD+R ++ PE RRESSLK+QTRC+R  P+ +GY L+SVEGRVA+E+FD S A QAK+YAFKCHR+     D+V+PVNA+AFHP +GTFATGGCDG V  WDG NKKRL Q   Y TSIAAL+++ DG LLA+A+SYTYEEG++ H  DA+++R
Sbjct:    7 PAASRELSNPPSDGVSNLRFS-NHSDHLLVSSWDKTVRLYDASANVLRGEFMHGGAVLDCCFHDDSSGFSASADNTVRRLVFNHGKEDIL--GKHEAPVRCVEYSYSAGQVITGSWDKKLKCWDPRGASGQERTLVGTYPQPERIYSLSLVGNRLVVATAGRHVNIYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATGGCDGFVNVWDGNNKKRLYQYSKYPTSIAALSFSRDGRLLAVASSYTYEEGDKPHEPDAIFVR 322
[Close]
BLAST of NO12G02230 vs. NCBI_GenBank
Match: XP_004152275.2 (PREDICTED: mitotic checkpoint protein BUB3.2 [Cucumis sativus] >KGN52771.1 hypothetical protein Csa_4G000900 [Cucumis sativus])

HSP 1 Score: 352.1 bits (902), Expect = 2.800e-93
Identity = 171/319 (53.61%), Postives = 228/319 (71.47%), Query Frame = 0 
Query:    3 PGSERPLENPAQDGISSLAFSPSSSNLLLISSWDKTARLYDATSNIAKGIWRNHAAVLDCAVQDDHTGFSGGLDRAVRMIYLNRPEDPGLNIGSHAKPVSCMEFSRELGALVTGGWDGHVHVWDPR-TQGEARSL----PTSEKVFTLAVSGNRIVVGTSDRSVLIYDVRKLNDPEDRRESSLKHQTRCIRISPDNSGYVLASVEGRVAVEYFDPSPAVQAKRYAFKCHRQG----DLVFPVNAVAFHPTHGTFATGGCDGMVYTWDGQNKKRLAQLGPYKTSIAALAYNFDGSLLALAASYTYEEGEREHPIDAVYLR 313
            P + R L NP  DGIS+L FS + S+ LL+SSWDKT RLYDA++N+ +G + +   VLDC   DD +GFS  +D  VR +  N  ++  L  G H  PV C+E+S   G L+TGGWD  +  WDPR   G+  +L    P  E+V++L++ GNR+VV T+ R V +YD+R ++ PE RRESSLK+QTRC+R  P+ +GY L+SVEGRVA+E+FDPS A QAK+YAFKCHR+     D+V+PVNA+AFHP +GTFATGGCDG V  WDG NKKRL Q   Y TS+AAL+++ DG LLA+A+SYT+EEG++ H  DA+Y+R
Sbjct:    7 PAAGRELSNPPSDGISNLRFS-NHSDHLLVSSWDKTVRLYDASANVLRGEFVHGGPVLDCCFHDDSSGFSVSVDNTVRRLVFNHNKEDIL--GRHDAPVRCVEYSYAAGQLITGGWDKTLKCWDPRGASGQEHTLVGTYPQPERVYSLSLVGNRLVVATAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDPSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATGGCDGYVNVWDGNNKKRLYQYSKYPTSVAALSFSRDGRLLAVASSYTFEEGDKPHEPDAIYVR 322
[Close]
BLAST of NO12G02230 vs. NCBI_GenBank
Match: XP_022923024.1 (mitotic checkpoint protein BUB3.2 [Cucurbita moschata])

HSP 1 Score: 350.9 bits (899), Expect = 6.200e-93
Identity = 171/319 (53.61%), Postives = 227/319 (71.16%), Query Frame = 0 
Query:    3 PGSERPLENPAQDGISSLAFSPSSSNLLLISSWDKTARLYDATSNIAKGIWRNHAAVLDCAVQDDHTGFSGGLDRAVRMIYLNRPEDPGLNIGSHAKPVSCMEFSRELGALVTGGWDGHVHVWDPR-TQGEARSL----PTSEKVFTLAVSGNRIVVGTSDRSVLIYDVRKLNDPEDRRESSLKHQTRCIRISPDNSGYVLASVEGRVAVEYFDPSPAVQAKRYAFKCHRQG----DLVFPVNAVAFHPTHGTFATGGCDGMVYTWDGQNKKRLAQLGPYKTSIAALAYNFDGSLLALAASYTYEEGEREHPIDAVYLR 313
            P + R L NP  DGIS+L FS + S+ LL+SSWDKT RLYDA++N+ +G + +   VLDC   DD +GFS  +D  VR +  N  ++  L  G H  PV C+E+S   G L+TG WD  +  WDPR   G+  +L    P  E+V++L++ GNR+VV T+ R V +YD+R ++ PE RRESSLK+QTRC+R  P+ +GY L+SVEGRVA+E+FDPS A QAK+YAFKCHR+     D+V+PVNA+AFHP +GTFATGGCDG V  WDG NKKRL Q   Y TSIAAL+++ DG LLA+A+SYT+EEG++ H  DA+Y+R
Sbjct:    8 PPAGRELSNPPSDGISNLRFS-NHSDHLLVSSWDKTVRLYDASANVLRGEFVHGGPVLDCCFHDDSSGFSASVDNTVRRLVFNHNKEDIL--GKHDAPVRCVEYSYAAGQLITGSWDKTLKCWDPRGASGQEHTLVGTYPQPERVYSLSLVGNRLVVATAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDPSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATGGCDGYVNVWDGNNKKRLYQYSKYPTSIAALSFSRDGRLLAVASSYTFEEGDKPHEPDAIYVR 323
[Close]
BLAST of NO12G02230 vs. NCBI_GenBank
Match: XP_002300265.2 (mitotic checkpoint protein BUB3.2 [Populus trichocarpa] >XP_011030351.1 PREDICTED: mitotic checkpoint protein BUB3.2-like [Populus euphratica] >XP_011012431.1 PREDICTED: mitotic checkpoint protein BUB3.2 [Populus euphratica] >PNT57360.1 hypothetical protein POPTR_001G295100v3 [Populus trichocarpa])

HSP 1 Score: 350.5 bits (898), Expect = 8.100e-93
Identity = 172/319 (53.92%), Postives = 228/319 (71.47%), Query Frame = 0 
Query:    3 PGSERPLENPAQDGISSLAFSPSSSNLLLISSWDKTARLYDATSNIAKGIWRNHAAVLDCAVQDDHTGFSGGLDRAVRMIYLNRPEDPGLNIGSHAKPVSCMEFSRELGALVTGGWDGHVHVWDPR-TQGEARSL----PTSEKVFTLAVSGNRIVVGTSDRSVLIYDVRKLNDPEDRRESSLKHQTRCIRISPDNSGYVLASVEGRVAVEYFDPSPAVQAKRYAFKCHRQG----DLVFPVNAVAFHPTHGTFATGGCDGMVYTWDGQNKKRLAQLGPYKTSIAALAYNFDGSLLALAASYTYEEGEREHPIDAVYLR 313
            P S R L NP  DGIS+L FS + S+LLL+SSWDKT RLYDA++N  +G + +  AVLDC   DD +GFS   D  VR +  N  ++  L  G H  PV C+E+S   G ++TG WD  +  WDPR   G+ R+L    P  E+V++L++ GNR+VV T+ R V +YD+R ++ PE RRESSLK+QTRC+R  P+ +GY L+SVEGRVA+E+FDPS A QAK+YAFKCHR+     D+V+PVNA+AFHP +GTFATGGCDG V  WDG NKKRL Q   Y +S+AAL+++ DG LLA+A+SYTYEEG++ H  DA+++R
Sbjct:    8 PFSGRELSNPPTDGISNLRFS-NHSDLLLVSSWDKTVRLYDASANALRGEFLHGGAVLDCCFHDDSSGFSASGDNTVRRLVFNHGKEDIL--GRHDAPVRCIEYSYAAGQVITGSWDKTLKCWDPRGASGQERTLVGTYPQPERVYSLSLVGNRLVVATAGRHVNVYDLRNMSLPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDPSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHPVYGTFATGGCDGFVNVWDGNNKKRLYQYSKYPSSVAALSFSRDGRLLAVASSYTYEEGDKPHEPDAIFVR 323
[Close]
BLAST of NO12G02230 vs. NCBI_GenBank
Match: XP_008454389.1 (PREDICTED: mitotic checkpoint protein BUB3.2 [Cucumis melo])

HSP 1 Score: 350.1 bits (897), Expect = 1.100e-92
Identity = 171/319 (53.61%), Postives = 227/319 (71.16%), Query Frame = 0 
Query:    3 PGSERPLENPAQDGISSLAFSPSSSNLLLISSWDKTARLYDATSNIAKGIWRNHAAVLDCAVQDDHTGFSGGLDRAVRMIYLNRPEDPGLNIGSHAKPVSCMEFSRELGALVTGGWDGHVHVWDPR-TQGEARSL----PTSEKVFTLAVSGNRIVVGTSDRSVLIYDVRKLNDPEDRRESSLKHQTRCIRISPDNSGYVLASVEGRVAVEYFDPSPAVQAKRYAFKCHRQG----DLVFPVNAVAFHPTHGTFATGGCDGMVYTWDGQNKKRLAQLGPYKTSIAALAYNFDGSLLALAASYTYEEGEREHPIDAVYLR 313
            P + R L NP  DGIS+L FS + S+ LL+SSWDKT RLYDA++N+ +G + +   VLDC   DD +GFS  +D  VR +  N  ++  L  G H  PV C+E+S   G L+TG WD  +  WDPR   G+  +L    P  E+V++L++ GNR+VV T+ R V +YD+R ++ PE RRESSLK+QTRC+R  P+ +GY L+SVEGRVA+E+FDPS A QAK+YAFKCHR+     D+V+PVNA+AFHP +GTFATGGCDG V  WDG NKKRL Q   Y TSIAAL+++ DG LLA+A+SYT+EEG++ H  DA+Y+R
Sbjct:    7 PAAGRELSNPPSDGISNLRFS-NHSDHLLVSSWDKTVRLYDASANVLRGEFVHGGPVLDCCFHDDSSGFSVSVDNTVRRLVFNHNKEDIL--GRHDAPVRCVEYSYAAGQLITGSWDKTLKCWDPRGASGQEHTLVGTYPQPERVYSLSLVGNRLVVATAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDPSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATGGCDGYVNVWDGNNKKRLYQYSKYPTSIAALSFSRDGRLLAVASSYTFEEGDKPHEPDAIYVR 322
[Close]
BLAST of NO12G02230 vs. NCBI_GenBank
Match: XP_022149336.1 (mitotic checkpoint protein BUB3.2 [Momordica charantia])

HSP 1 Score: 350.1 bits (897), Expect = 1.100e-92
Identity = 170/319 (53.29%), Postives = 226/319 (70.85%), Query Frame = 0 
Query:    3 PGSERPLENPAQDGISSLAFSPSSSNLLLISSWDKTARLYDATSNIAKGIWRNHAAVLDCAVQDDHTGFSGGLDRAVRMIYLNRPEDPGLNIGSHAKPVSCMEFSRELGALVTGGWDGHVHVWDPR-TQGEARSL----PTSEKVFTLAVSGNRIVVGTSDRSVLIYDVRKLNDPEDRRESSLKHQTRCIRISPDNSGYVLASVEGRVAVEYFDPSPAVQAKRYAFKCHRQG----DLVFPVNAVAFHPTHGTFATGGCDGMVYTWDGQNKKRLAQLGPYKTSIAALAYNFDGSLLALAASYTYEEGEREHPIDAVYLR 313
            P + R L NP  DGIS+L FS + S+ LL+SSWDKT RLYDA++N+ +G + +   VLDC   DD +GFS  +D  VR +  N  ++  L  G H  PV C+E+S   G L+TG WD  +  WDPR   G+  +L    P  E+V++L++ GNR+VV T+ R V +YD+R ++ PE RRESSLK+QTRC+R  P+ +GY L+SVEGRVA+E+FDPS A Q K+YAFKCHR+     D+V+PVNA+AFHP +GTFATGGCDG V  WDG NKKRL Q   Y TSIAAL+++ DG LLA+A+SYT+EEG++ H  DA+Y+R
Sbjct:    7 PAAGRELSNPPSDGISNLRFS-NHSDHLLVSSWDKTVRLYDASANVLRGEFVHGGPVLDCCFHDDSSGFSASVDNTVRRLVFNHNKEDIL--GKHDAPVRCVEYSYAAGQLITGSWDKTLKCWDPRGASGQEHTLVGTYPQPERVYSLSLVGNRLVVATAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDPSEASQTKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATGGCDGYVNVWDGNNKKRLYQYSKYPTSIAALSFSRDGRLLAVASSYTFEEGDKPHEPDAIYVR 322
[Close]
BLAST of NO12G02230 vs. NCBI_GenBank
Match: XP_022984956.1 (mitotic checkpoint protein BUB3.2 [Cucurbita maxima])

HSP 1 Score: 349.7 bits (896), Expect = 1.400e-92
Identity = 171/319 (53.61%), Postives = 227/319 (71.16%), Query Frame = 0 
Query:    3 PGSERPLENPAQDGISSLAFSPSSSNLLLISSWDKTARLYDATSNIAKGIWRNHAAVLDCAVQDDHTGFSGGLDRAVRMIYLNRPEDPGLNIGSHAKPVSCMEFSRELGALVTGGWDGHVHVWDPR-TQGEARSL----PTSEKVFTLAVSGNRIVVGTSDRSVLIYDVRKLNDPEDRRESSLKHQTRCIRISPDNSGYVLASVEGRVAVEYFDPSPAVQAKRYAFKCHRQG----DLVFPVNAVAFHPTHGTFATGGCDGMVYTWDGQNKKRLAQLGPYKTSIAALAYNFDGSLLALAASYTYEEGEREHPIDAVYLR 313
            P + R L NP  DGIS+L FS + S+ LL+SSWDKT RLYDA++N+ +G + +   VLDC   DD +GFS  +D  VR +  N  ++  L  G H  PV C+E+S   G L+TG WD  +  WDPR   G+  +L    P  E+V++L++ GNR+VV T+ R V +YD+R ++ PE RRESSLK+QTRC+R  P+ +GY L+SVEGRVA+E+FDPS A QAK+YAFKCHR+     D+V+PVNA+AFHP +GTFATGGCDG V  WDG NKKRL Q   Y TSIAAL+++ DG LLA+A+SYT+EEG++ H  DA+Y+R
Sbjct:    7 PPAGRELSNPPSDGISNLRFS-NHSDHLLVSSWDKTVRLYDASANVLRGEFVHGGPVLDCCFHDDSSGFSVSVDNTVRRLVFNHNKEDIL--GKHDAPVRCVEYSYAAGQLITGSWDKTLKCWDPRGASGQEHTLVGTYPQPERVYSLSLVGNRLVVATAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDPSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATGGCDGYVNVWDGNNKKRLYQYSKYPTSIAALSFSRDGRLLAVASSYTFEEGDKPHEPDAIYVR 322
[Close]
BLAST of NO12G02230 vs. NCBI_GenBank
Match: XP_023551963.1 (mitotic checkpoint protein BUB3.2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 349.4 bits (895), Expect = 1.800e-92
Identity = 170/319 (53.29%), Postives = 227/319 (71.16%), Query Frame = 0 
Query:    3 PGSERPLENPAQDGISSLAFSPSSSNLLLISSWDKTARLYDATSNIAKGIWRNHAAVLDCAVQDDHTGFSGGLDRAVRMIYLNRPEDPGLNIGSHAKPVSCMEFSRELGALVTGGWDGHVHVWDPR-TQGEARSL----PTSEKVFTLAVSGNRIVVGTSDRSVLIYDVRKLNDPEDRRESSLKHQTRCIRISPDNSGYVLASVEGRVAVEYFDPSPAVQAKRYAFKCHRQG----DLVFPVNAVAFHPTHGTFATGGCDGMVYTWDGQNKKRLAQLGPYKTSIAALAYNFDGSLLALAASYTYEEGEREHPIDAVYLR 313
            P + R L NP  DG+S+L FS + S+ LL+SSWDKT RLYDA++N+ +G + +   VLDC   DD +GFS  +D  VR +  N  ++  L  G H  PV C+E+S   G L+TG WD  +  WDPR   G+  +L    P  E+V++L++ GNR+VV T+ R V +YD+R ++ PE RRESSLK+QTRC+R  P+ +GY L+SVEGRVA+E+FDPS A QAK+YAFKCHR+     D+V+PVNA+AFHP +GTFATGGCDG V  WDG NKKRL Q   Y TSIAAL+++ DG LLA+A+SYT+EEG++ H  DA+Y+R
Sbjct:    8 PPAGRELSNPPSDGVSNLRFS-NHSDHLLVSSWDKTVRLYDASANVLRGEFVHGGPVLDCCFHDDSSGFSVSVDNTVRRLVFNHNKEDIL--GKHDAPVRCVEYSYAAGQLITGSWDKTLKCWDPRGASGQEHTLVGTYPQPERVYSLSLVGNRLVVATAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDPSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATGGCDGYVNVWDGNNKKRLYQYSKYPTSIAALSFSRDGRLLAVASSYTFEEGDKPHEPDAIYVR 323
The following BLAST results are available for this feature:
BLAST of NO12G02230 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005853641.11.000e-16487.74cell cycle arrest protein BUB3 [Nannochloropsis ga... [more]
EWM25818.13.000e-16487.42mitotic checkpoint protein bub3 [Nannochloropsis g... [more]
OWM79169.12.100e-9353.29hypothetical protein CDL15_Pgr003340 [Punica grana... [more]
XP_004152275.22.800e-9353.61PREDICTED: mitotic checkpoint protein BUB3.2 [Cucu... [more]
XP_022923024.16.200e-9353.61mitotic checkpoint protein BUB3.2 [Cucurbita mosch... [more]
XP_002300265.28.100e-9353.92mitotic checkpoint protein BUB3.2 [Populus trichoc... [more]
XP_008454389.11.100e-9253.61PREDICTED: mitotic checkpoint protein BUB3.2 [Cucu... [more]
XP_022149336.11.100e-9253.29mitotic checkpoint protein BUB3.2 [Momordica chara... [more]
XP_022984956.11.400e-9253.61mitotic checkpoint protein BUB3.2 [Cucurbita maxim... [more]
XP_023551963.11.800e-9253.29mitotic checkpoint protein BUB3.2 [Cucurbita pepo ... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL126nonsL126Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL125nonsL125Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL124nonsL124Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR015ncniR015Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR014ncniR014Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR008ngnoR008Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR007ngnoR007Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR006ngnoR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010124NSK010124Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO12G02230.1NO12G02230.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|529379gene_5384Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100021g16gene4680Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO12G02230.1NO12G02230.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO12G02230 ID=NO12G02230|Name=NO12G02230|organism=Nannochloropsis oceanica|type=gene|length=2882bp
ATGGAGCCCGGCAGTGAACGACCTTTGGAAAATCCAGCGCAGGATGGTAT
CTCCTCCTTGGCCTTCTCCCCCAGCAGCTCCAACCTCTTGCTCATTTCCT
CTTGGGACAAGACCGCCCGCTTATACGACGCGACATCCAATATCGCCAAG
GGCATTTGGAGGAACCATGCTGCCGTCTTGGACTGTGCCGTGCAAGACGA
TCATACAGGCTTTTCTGGGGGGCTTGACCGGGCGGTGCGCATgtacgttt
gaaagggggtggaagtttttgttctctagtctagtgttcagggaagaccc
tctcgtctcgcttacttacccctcacattactctcccctcggacgactca
gGATTTACTTAAACCGTCCCGAGGACCCTGGTTTGAACATTGGGAGCCAC
GCGAAGCCCGTGAGCTGCATGGAGTTTTCGAGGGAGTTGGGTGCCTTGGT
CACGGGTGGATGGGACGGCCATGTGCACGTTTGgtaaggagaagaaagga
ggagcaaaagaagaaagggaggaaagatcagtaagataggaaggtgatgg
agagttttgaaaataggggcatattagtaaccggttacaggcatgcgctg
taagagaaagaaatacagctcctctcctaacccgtgctcacaacacccct
ccctgacacaattggatataaatagGGATCCACGCACACAAGGAGAGGCA
CGAAGCTTACCGACATCGGAAAAAGTCTTTACATTGGCAGTGTCGGGTAA
CCGCATTGTGGTCGGCACTTCAGACCGTTCCGTCCTCATTTACGACGTAA
Ggtacgtttggttttaatttttgttgcaggaaagtaggcggtaaacgcgc
ggaccagcactcaatattaaatcaaattgctggttgtgggccattttcac
ttacatgcacgaatatacagAAAGCTGAACGACCCAGAGGACCGGCGGGA
GTCCTCCCTGAAACACCAAACCCGATGCATCCGTATATCCCCCGATAACA
GCGgtgagtagttcttgctcgtccttgcctggttgatcgcaacatcaggc
atgattcatggtcgcatctatcttatttacttttgggtgcggtgtcatgc
cgtacaatcaggaaagacacccactcgacattttcatcctgtctttctgc
ccaaacataatgtgtccctcatgccatcttccccgcactcttatttaccg
tgttagGCTACGTCCTTGCCTCCGTAGAAGGCCGCGTGGCAGTCGAGTAT
TTTGACCCCTCCCCGGCTGTCCAAGCTAAGCGATATGCCTTCAAATGCCA
CCGACAGGGCGACCTCGTATTCCCCGTCAATGCTGTGGCCTTCCATCCCA
CTCACGGCACATTCGCTACGGGTGGTTGTGACGGGATGGTGTATACATGG
GACGGACAGAACAAGAAGAGGCTGGCACAACTGGGGCCTTACAAGACGAG
CATTGCTGCGCTTGCGTACAACTTTGATGGGTCACTTTTGGCCTTGGCTG
CGTCATACACCTATGAGGAGGGCGAGAGAGAGCATCCCATCGATGCGGTG
TATTTGCGTTGCCCACTTGAGGGTGAGgtcaggcgcaaggtcaaggccgc
agggtgagtgggtggctttgcaaaattttagagagaagtaggagggacgg
ggtgtaaaaggatgcaaattcaaactaaaagacagatttaaaagcatgaa
gtcacaaagataccaggaacaaatatttaatctatatggggctatgcgta
tagagtatctcgaggcggaaaggggagttgatgtgtacttgaatgaccgt
ggggggcgaaaaaaggttagctaccctagggattgccgcagacatggtgt
tcctccgcattggacggaagcttgacggcggtgaggatgatgcagagggt
gaatatgacgaggataaataacagatctctagaaaagtgcgaacaccatc
attctaatgttatcgtgtctaccacatgtccaacacacccgagattcaca
cacaaagaggagccttttgcccaatatcaattcctttttactcgtcgcct
acacactcgtcctatggtgtttttatgagtgagaggggtggctttagcaa
tcgaaaaagcgcgtctgatctgccttctgccatcctttcccggtccgatc
agcaccgcgactgcaacttacattttgccactttgccacggacaacacca
cactctccattagagccgtcattggaccaaagagggcaccttgcctaccc
atgatacatgtgtgcgtgcaccaccatgatgtgtcattggcccctcttgt
tggtgggctcatcctacccactttttatcttggaacgccctcctgaagga
ggagaaggagggggaggacgagggaaaggagggggaggaagaggaggagg
gagaggatcagtagCAGGAGGAGGAGGAGGGAAAGGAGAAGGAGAAGGAG
AAGGAGGGGGGGGTGGAGGAGGAGGTGGACGAGGAGGAGGTGGACGAGGA
AGTGGACGAGAAAGAGGGGGACGAGAAGGGAGACGAGGAGAAGAAGAGGA
AGAAGAAGGAGGAGGGAGAGACGGAGGGAGACGAGGAGTGGGTGGAAGGG
GAAGGGGAGGAGAAGAAGGAGGCGGTGGAAGCAGAGGGGGATGAGAAGCA
GCAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGAAGGGGGAAGAGGAGG
AGGAGGAAGAGAAAGGGGAGGAGGAGGCGGAGGCGGTGGAAGCAGAGGAG
GAGAGGGGGGAAGGAGGAGGAGGAGGAGGAGGAGGTCACGGGCGGGCCAT
CCGAGGACTTTGTTGGTGTGACACCTGTGAACAATTCTTGTCCCGGGACG
GCAATGGGGCACGTAACATCCTGCGGGTGTAA
back to top

protein sequence of NO12G02230.1

>NO12G02230.1-protein ID=NO12G02230.1-protein|Name=NO12G02230.1|organism=Nannochloropsis oceanica|type=polypeptide|length=474bp
MEPGSERPLENPAQDGISSLAFSPSSSNLLLISSWDKTARLYDATSNIAK
GIWRNHAAVLDCAVQDDHTGFSGGLDRAVRMIYLNRPEDPGLNIGSHAKP
VSCMEFSRELGALVTGGWDGHVHVWDPRTQGEARSLPTSEKVFTLAVSGN
RIVVGTSDRSVLIYDVRKLNDPEDRRESSLKHQTRCIRISPDNSGYVLAS
VEGRVAVEYFDPSPAVQAKRYAFKCHRQGDLVFPVNAVAFHPTHGTFATG
GCDGMVYTWDGQNKKRLAQLGPYKTSIAALAYNFDGSLLALAASYTYEEG
EREHPIDAVYLRCPLEGEQEEEEGKEKEKEKEGGVEEEVDEEEVDEEVDE
KEGDEKGDEEKKRKKKEEGETEGDEEWVEGEGEEKKEAVEAEGDEKQQEE
EEEEEEEEKGEEEEEEEKGEEEAEAVEAEEERGEGGGGGGGGHGRAIRGL
CWCDTCEQFLSRDGNGARNILRV*
back to top
Synonyms
Publications