NO12G02220, NO12G02220 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO12G02220 vs. NCBI_GenBank
Match: XP_005853639.1 (ubiquitin-conjugating enzyme E2 N [Nannochloropsis gaditana CCMP526] >XP_005856102.1 ubiquitin-conjugating enzyme E2 N [Nannochloropsis gaditana CCMP526] >EKU20238.1 ubiquitin-conjugating enzyme E2 N [Nannochloropsis gaditana CCMP526] >EKU22720.1 ubiquitin-conjugating enzyme E2 N [Nannochloropsis gaditana CCMP526] >EWM25832.1 ubiquitin-conjugating enzyme [Nannochloropsis gaditana]) HSP 1 Score: 286.6 bits (732), Expect = 5.900e-74 Identity = 148/192 (77.08%), Postives = 149/192 (77.60%), Query Frame = 0 Query: 1 MSATLPRRIVKETQRLISEPVPGIHATPYEDNFRYFSVVIEGPESSPYQQGTFKLELFLPADYPMAPPKVRFLTKMYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLVSEQWRKGIERGRKREHLRIHAINVQENLEYLFYSIYPRHKSCPNPEDPLNNQVAELWKADEDRAIANAKEWTRLYATK 193 MSATLPRRIVKETQRLISEPVPGI ATPYEDNFRYF+VVIEGPESSPYQQG FKLELFLPADYPMAPPKVRFLTKMYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALL SCPNPEDPLNNQVAELWKADEDRAIANAKEWTRLYATK Sbjct: 1 MSATLPRRIVKETQRLISEPVPGISATPYEDNFRYFNVVIEGPESSPYQQGIFKLELFLPADYPMAPPKVRFLTKMYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALL-----------------------------------------SCPNPEDPLNNQVAELWKADEDRAIANAKEWTRLYATK 151
BLAST of NO12G02220 vs. NCBI_GenBank
Match: GAX95735.1 (ubiquitinconjugating enzyme E2 putative [Pythium insidiosum]) HSP 1 Score: 233.4 bits (594), Expect = 5.900e-58 Identity = 119/190 (62.63%), Postives = 132/190 (69.47%), Query Frame = 0 Query: 1 MSATLPRRIVKETQRLISEPVPGIHATPYEDNFRYFSVVIEGPESSPYQQGTFKLELFLPADYPMAPPKVRFLTKMYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLVSEQWRKGIERGRKREHLRIHAINVQENLEYLFYSIYPRHKSCPNPEDPLNNQVAELWKADEDRAIANAKEWTRLYA 191 M++ LPRRIVKETQRL++EPVPGI ATPYEDN RYF VVI GP+SSPY+ G FKLELFLPADYPMAPPKVRFLT++YHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALL S PNP+DPL N VA+ WK+DE A+ A EWTR +A Sbjct: 41 MASALPRRIVKETQRLLAEPVPGISATPYEDNLRYFQVVIAGPQSSPYENGIFKLELFLPADYPMAPPKVRFLTRIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALL-----------------------------------------SAPNPDDPLANDVADHWKSDEAGAVRTAAEWTRRFA 189
BLAST of NO12G02220 vs. NCBI_GenBank
Match: OQR95114.1 (ubiquitin-conjugating enzyme E2 [Achlya hypogyna]) HSP 1 Score: 233.0 bits (593), Expect = 7.700e-58 Identity = 119/189 (62.96%), Postives = 131/189 (69.31%), Query Frame = 0 Query: 2 SATLPRRIVKETQRLISEPVPGIHATPYEDNFRYFSVVIEGPESSPYQQGTFKLELFLPADYPMAPPKVRFLTKMYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLVSEQWRKGIERGRKREHLRIHAINVQENLEYLFYSIYPRHKSCPNPEDPLNNQVAELWKADEDRAIANAKEWTRLYA 191 +A LPRRIVKETQRL++EPVPGI ATPYEDN RYF VVI GP+SSPY+ G FKLELFLPADYPMAPPKVRFLT++YHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALL S PNP+DPL N VA+ WK+DE A+ A EWTR +A Sbjct: 4 AANLPRRIVKETQRLLAEPVPGISATPYEDNLRYFQVVIAGPQSSPYENGIFKLELFLPADYPMAPPKVRFLTRIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALL-----------------------------------------SAPNPDDPLANDVADHWKSDEPAALRTAMEWTRRFA 151
BLAST of NO12G02220 vs. NCBI_GenBank
Match: XP_008606915.1 (ubiquitin-conjugating enzyme E2 35 [Saprolegnia diclina VS20] >EQC39643.1 ubiquitin-conjugating enzyme E2 35 [Saprolegnia diclina VS20]) HSP 1 Score: 232.3 bits (591), Expect = 1.300e-57 Identity = 119/189 (62.96%), Postives = 130/189 (68.78%), Query Frame = 0 Query: 2 SATLPRRIVKETQRLISEPVPGIHATPYEDNFRYFSVVIEGPESSPYQQGTFKLELFLPADYPMAPPKVRFLTKMYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLVSEQWRKGIERGRKREHLRIHAINVQENLEYLFYSIYPRHKSCPNPEDPLNNQVAELWKADEDRAIANAKEWTRLYA 191 +A LPRRIVKETQRL++EPVPGI ATPYEDN RYF VVI GP+SSPY+ G FKLELFLPADYPMAPPKVRFLT++YHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALL S PNP+DPL N VA+ WK DE A+ A EWTR +A Sbjct: 4 AANLPRRIVKETQRLLAEPVPGISATPYEDNLRYFQVVIAGPQSSPYENGIFKLELFLPADYPMAPPKVRFLTRIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALL-----------------------------------------SAPNPDDPLANDVADHWKTDEPGALRTAMEWTRRFA 151
BLAST of NO12G02220 vs. NCBI_GenBank
Match: XP_009835207.1 (ubiquitin-conjugating enzyme E2 N [Aphanomyces astaci] >ETV75159.1 ubiquitin-conjugating enzyme E2 N [Aphanomyces astaci]) HSP 1 Score: 231.5 bits (589), Expect = 2.200e-57 Identity = 119/188 (63.30%), Postives = 129/188 (68.62%), Query Frame = 0 Query: 3 ATLPRRIVKETQRLISEPVPGIHATPYEDNFRYFSVVIEGPESSPYQQGTFKLELFLPADYPMAPPKVRFLTKMYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLVSEQWRKGIERGRKREHLRIHAINVQENLEYLFYSIYPRHKSCPNPEDPLNNQVAELWKADEDRAIANAKEWTRLYA 191 A LPRRIVKETQRL++EPVPGI ATPYEDN RYF VVI GP+SSPY+ G FKLELFLPADYPMAPPKVRFLT++YHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALL S PNP+DPL N VA+ WK DE A+ A EWTR +A Sbjct: 5 ALLPRRIVKETQRLLAEPVPGISATPYEDNLRYFQVVIAGPQSSPYEHGIFKLELFLPADYPMAPPKVRFLTRIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALL-----------------------------------------SAPNPDDPLANDVADHWKTDEPGALRTATEWTRRFA 151
BLAST of NO12G02220 vs. NCBI_GenBank
Match: XP_024582852.1 (ubiquitin-conjugating enzyme e2 n [Plasmopara halstedii] >CEG46483.1 ubiquitin-conjugating enzyme e2 n [Plasmopara halstedii]) HSP 1 Score: 231.5 bits (589), Expect = 2.200e-57 Identity = 119/190 (62.63%), Postives = 130/190 (68.42%), Query Frame = 0 Query: 1 MSATLPRRIVKETQRLISEPVPGIHATPYEDNFRYFSVVIEGPESSPYQQGTFKLELFLPADYPMAPPKVRFLTKMYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLVSEQWRKGIERGRKREHLRIHAINVQENLEYLFYSIYPRHKSCPNPEDPLNNQVAELWKADEDRAIANAKEWTRLYA 191 M++TLPRRIVKETQRL++EPV GI ATPYEDN RYF VVI GP+SSPY+ G FKLELFLP DYPMAPPKVRFLT++YHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALL S PNP+DPL N VA+ WK DE A+ A EWTR YA Sbjct: 1 MASTLPRRIVKETQRLLAEPVAGISATPYEDNLRYFQVVIAGPQSSPYEHGIFKLELFLPVDYPMAPPKVRFLTRIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALL-----------------------------------------SAPNPDDPLANDVADHWKTDEAGAVHTAAEWTRRYA 149
BLAST of NO12G02220 vs. NCBI_GenBank
Match: XP_008871705.1 (ubiquitin-conjugating enzyme E2 N [Aphanomyces invadans] >ETV99929.1 ubiquitin-conjugating enzyme E2 N [Aphanomyces invadans]) HSP 1 Score: 230.7 bits (587), Expect = 3.800e-57 Identity = 118/186 (63.44%), Postives = 128/186 (68.82%), Query Frame = 0 Query: 5 LPRRIVKETQRLISEPVPGIHATPYEDNFRYFSVVIEGPESSPYQQGTFKLELFLPADYPMAPPKVRFLTKMYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLVSEQWRKGIERGRKREHLRIHAINVQENLEYLFYSIYPRHKSCPNPEDPLNNQVAELWKADEDRAIANAKEWTRLYA 191 LPRRIVKETQRL++EPVPGI ATPYEDN RYF VVI GP+SSPY+ G FKLELFLPADYPMAPPKVRFLT++YHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALL S PNP+DPL N VA+ WK DE A+ A EWTR +A Sbjct: 7 LPRRIVKETQRLLAEPVPGISATPYEDNLRYFQVVIAGPQSSPYEHGIFKLELFLPADYPMAPPKVRFLTRIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALL-----------------------------------------SAPNPDDPLANDVADHWKTDEPAALRTATEWTRRFA 151
BLAST of NO12G02220 vs. NCBI_GenBank
Match: XP_020106044.1 (ubiquitin-conjugating enzyme E2 36-like [Ananas comosus]) HSP 1 Score: 230.7 bits (587), Expect = 3.800e-57 Identity = 116/190 (61.05%), Postives = 133/190 (70.00%), Query Frame = 0 Query: 2 SATLPRRIVKETQRLISEPVPGIHATPYEDNFRYFSVVIEGPESSPYQQGTFKLELFLPADYPMAPPKVRFLTKMYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLVSEQWRKGIERGRKREHLRIHAINVQENLEYLFYSIYPRHKSCPNPEDPLNNQVAELWKADEDRAIANAKEWTRLYAT 192 ++ LPRRI+KETQRL+SEP PGI ATPYE+N RYF+V+I GPE SPY+ G FKLELFLP +YPMAPPKVRFLTK+YHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALL S PNP+DPL++ +A+ WKA+E A+ AKEWTRLYAT Sbjct: 3 NSNLPRRIIKETQRLLSEPAPGIIATPYEENMRYFNVMILGPEQSPYEGGVFKLELFLPEEYPMAPPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALL-----------------------------------------SAPNPDDPLSDNIAKHWKANEAEAVETAKEWTRLYAT 151
BLAST of NO12G02220 vs. NCBI_GenBank
Match: OQR89233.1 (ubiquitin-conjugating enzyme E2, partial [Thraustotheca clavata]) HSP 1 Score: 230.7 bits (587), Expect = 3.800e-57 Identity = 118/186 (63.44%), Postives = 129/186 (69.35%), Query Frame = 0 Query: 5 LPRRIVKETQRLISEPVPGIHATPYEDNFRYFSVVIEGPESSPYQQGTFKLELFLPADYPMAPPKVRFLTKMYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLVSEQWRKGIERGRKREHLRIHAINVQENLEYLFYSIYPRHKSCPNPEDPLNNQVAELWKADEDRAIANAKEWTRLYA 191 LPRRIVKETQRL++EPVPGI ATPYEDN RYF VVI GP+SSPY+ G FKLELFLPADYPMAPPKVRFLT++YHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALL S PNP+DPL N VA+ WK+DE A+ A EWTR +A Sbjct: 510 LPRRIVKETQRLLAEPVPGISATPYEDNLRYFQVVIAGPQSSPYENGIFKLELFLPADYPMAPPKVRFLTRIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALL-----------------------------------------SAPNPDDPLANDVADHWKSDEPGALRTAMEWTRRFA 654
BLAST of NO12G02220 vs. NCBI_GenBank
Match: OEU16300.1 (ubiquitin-conjugating enzyme [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 230.3 bits (586), Expect = 5.000e-57 Identity = 117/193 (60.62%), Postives = 136/193 (70.47%), Query Frame = 0 Query: 1 MSATLPRRIVKETQRLISEPVPGIHATPYEDNFRYFSVVIEGPESSPYQQGTFKLELFLPADYPMAPPKVRFLTKMYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLVSEQWRKGIERGRKREHLRIHAINVQENLEYLFYSIYPRHKSCPNPEDPLNNQVAELWKADEDRAIANAKEWTRLYATKS 194 MSA LPRRI+KETQRL++EPV GI ATPY DN RYF+V IEGPE +PY++G F+LELFLPADYPMAPPKVRFLTK+YHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALL S PNP+DPL+N VAE+WK +E+ A+ A+E+T+ +AT S Sbjct: 1 MSAGLPRRIIKETQRLVAEPVAGISATPYADNLRYFTVGIEGPEETPYEKGVFQLELFLPADYPMAPPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALL-----------------------------------------SAPNPDDPLDNNVAEVWKNNEEEALKRAREFTKSFATPS 152 The following BLAST results are available for this feature:
BLAST of NO12G02220 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO12G02220 ID=NO12G02220|Name=NO12G02220|organism=Nannochloropsis oceanica|type=gene|length=2001bpback to top protein sequence of NO12G02220.2 >NO12G02220.2-protein ID=NO12G02220.2-protein|Name=NO12G02220.2|organism=Nannochloropsis oceanica|type=polypeptide|length=194bpback to top protein sequence of NO12G02220.1 >NO12G02220.1-protein ID=NO12G02220.1-protein|Name=NO12G02220.1|organism=Nannochloropsis oceanica|type=polypeptide|length=153bpback to top Synonyms
Publications
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