NO12G02180, NO12G02180 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO12G02180 vs. NCBI_GenBank
Match: EWM25824.1 (c2h2 zinc finger protein [Nannochloropsis gaditana]) HSP 1 Score: 663.7 bits (1711), Expect = 5.000e-187 Identity = 358/530 (67.55%), Postives = 398/530 (75.09%), Query Frame = 0 Query: 3 NPATRLPAAVATDNGQPTPPSSTSTTAGLEQSAWTAQEKRVLESARYKQLQSCAGNMAFELGCLERQIIAAVAPEKSLSYVIGRIQEIYDEIRKTKCDMIQGAPALRIGKQKCTNANCDNEDPNEFIPSRGGAVACRRCGDCQSDYVIHEGEMYRNFTGEEDRSHHGPVLNPLYSASYNLGTQFTGLRGQKRNTGRETDFSVSNIGRDAAAVGGTLATRVEYKDDQKSKAFRIMREQGANLALHGLVRKKSSELFAAYRDARDRLYDFDAVVAACLIAAHLEVLVEEGSDGSRATFSFACPACGVAGFTAKRDADKHCVVSMGPSYSSSXXXXXXXXXXSGAELPGLSGMGSEGEGEGGVLGTRKASSNVAVDPEIHKLNLAETRRLLLWVSQGAPYQVTAVDGICKGLQAELKSLAAKGNDSDDEEEQGVEGEKLGWNTSGKMERESEYKAGQLLIMASLKVLTGWCGKDQEAGRLFHDYLQGVKKRKSERDALREEXXXXXXXXXXXXEKPIFQELAFPCKINGGNSS 533 N + R P A TAGLEQSAWT QEKRV++S RY+QL G+ +FE CLERQI+AAVAP++ L V+GRI EIYDEIR+ K DMI G PALR KQKCTN NCDN+DPN+FIPSRGGAVAC RCGDCQSDYVIHEGEMYRNF GEEDRSHHGP LNPLYSASYNLGTQFTGLRGQKRNTGRETDFSVSNIGRD AAVGGT+ATRVEYKDDQKSKAFRIMREQGANLALHGLVRKK++ELFAAYRDARDRL+DF+AVVAACLIAAHLEVLVEEGSDGS TF+FACP CG+ GFT KRDA+KHCVVS GP+ SS L +G G G G RKAS A DP++ K+ LAETRRLLLWVS+GAPYQ AVDG+C GLQAE++S + ++ERES +KAGQLL+MASLKVLT WCG D EAGRLF DYLQGVKKRK ER A XXXXXXXXXXXXE+PIFQEL+ K G +++ Sbjct: 7 NGSGRAPVTEAGGGPDAQDGLRRPVTAGLEQSAWTQQEKRVIKSTRYRQLCELGGSASFEPACLERQIVAAVAPDRELPAVVGRIHEIYDEIRRNKKDMIDGVPALRAVKQKCTNTNCDNDDPNDFIPSRGGAVACMRCGDCQSDYVIHEGEMYRNFAGEEDRSHHGPALNPLYSASYNLGTQFTGLRGQKRNTGRETDFSVSNIGRDGAAVGGTMATRVEYKDDQKSKAFRIMREQGANLALHGLVRKKAAELFAAYRDARDRLFDFEAVVAACLIAAHLEVLVEEGSDGSGVTFAFACPGCGLRGFTVKRDAEKHCVVSTGPAGSSDSME---------GSLEHSAGAGGRSHGGGRPQSWRKASCEAAADPDVAKMGLAETRRLLLWVSEGAPYQQAAVDGVCAGLQAEMRSXXXXXXXXXXXXXXXXXXXXXXXXDTREVERESAFKAGQLLVMASLKVLTRWCGDDSEAGRLFFDYLQGVKKRKMERGAXXXXXXXXXXXXXXXXERPIFQELSVSLKSEGASNN 527
BLAST of NO12G02180 vs. NCBI_GenBank
Match: XP_005856342.1 (c2h2 zinc finger protein, partial [Nannochloropsis gaditana CCMP526] >EKU20024.1 c2h2 zinc finger protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 343.2 bits (879), Expect = 1.500e-90 Identity = 169/227 (74.45%), Postives = 183/227 (80.62%), Query Frame = 0 Query: 3 NPATRLPAAVATDNGQPTPPSSTSTTAGLEQSAWTAQEKRVLESARYKQLQSCAGNMAFELGCLERQIIAAVAPEKSLSYVIGRIQEIYDEIRKTKCDMIQGAPALRIGKQKCTNANCDNEDPNEFIPSRGGAVACRRCGDCQSDYVIHEGEMYRNFTGEEDRSHHGPVLNPLYSASYNLGTQFTGLRGQKRNTGRETDFSVSNIGRDAAAVGGTLATRVEYKDDQK 230 N + R P A TAGLEQSAWT QEKRV++S RY+QL G+ +FE CLERQI+AAVAP++ L V+GRI EIYDEIR+ K DMI G PALR KQKCTN NCDN+DPN+FIPSRGGAVAC RCGDCQSDYVIHEGEMYRNF GEEDRSHHGP LNPLYSASYNLGTQFTGLRGQKRNTGRETDFSVSNIGRD AAVGGT+ATRVEYKDDQK Sbjct: 15 NGSGRAPVTEAGGGPDAQDGLRRPVTAGLEQSAWTQQEKRVIKSTRYRQLCELGGSASFEPACLERQIVAAVAPDRELPAVVGRIHEIYDEIRRNKKDMIDGVPALRAVKQKCTNTNCDNDDPNDFIPSRGGAVACMRCGDCQSDYVIHEGEMYRNFAGEEDRSHHGPALNPLYSASYNLGTQFTGLRGQKRNTGRETDFSVSNIGRDGAAVGGTMATRVEYKDDQK 241
BLAST of NO12G02180 vs. NCBI_GenBank
Match: OQR95873.1 (hypothetical protein THRCLA_07499 [Thraustotheca clavata]) HSP 1 Score: 131.3 bits (329), Expect = 9.000e-27 Identity = 77/227 (33.92%), Postives = 121/227 (53.30%), Query Frame = 0 Query: 66 LERQIIAAVAPEKSLSYVIGRIQEIYDEIRKTKCDMIQGAPALRIGKQKCTNANCDNEDPNEFIP--SRGGAVAC----RRCGDCQSDYVIHEGEMYRNFTGEEDRSHHGPVLNPLYSASYNLGTQFTGLRGQKRNTGRETDF---SVSNIGRDAAAVGGTLATRVEYKDDQKSKAFRIMREQGANLALHGLVRKKSSELFAAYRDARDRLYDFDAVVAACLIAAHL 284 +E +I + P+ ++ +I I+++ + K+ D A A + C N + N FI +RG + CG+ D+++HEG YR F GEED+SHHGP N L+S +NL T + Q N R +F ++S +G+D TR+ YKD K KA R++ GANL LH +V ++ ++FA +RD R+ ++ F+AVVA C+I A+L Sbjct: 50 MEERITNLLVPDMKVNDIIQLIKKM-KQAGKSDADEFSEADAEINAAPRFVCDVCGNSEQNNFITDYARGDTICTGADGHGCGNVVQDHIVHEGNAYRKFEGEEDKSHHGPAPNKLFSTGHNLRTMISQDGEQSANLRRAAEFVEMNLSQMGKDER------RTRIGYKDQMKQKAIRLIDHTGANLDLHEIVCNRAKKMFAEFRDLREHVHQFEAVVAGCIIDAYL 269
BLAST of NO12G02180 vs. NCBI_GenBank
Match: OQR84852.1 (hypothetical protein ACHHYP_12638 [Achlya hypogyna]) HSP 1 Score: 130.6 bits (327), Expect = 1.500e-26 Identity = 77/227 (33.92%), Postives = 121/227 (53.30%), Query Frame = 0 Query: 66 LERQIIAAVAPEKSLSYVIGRIQEIYDEIRKTKCDMIQGAPALRIGKQKCTNANCDNEDPNEFIP--SRGGAVAC----RRCGDCQSDYVIHEGEMYRNFTGEEDRSHHGPVLNPLYSASYNLGTQFTGLRGQKRNTGRETDF---SVSNIGRDAAAVGGTLATRVEYKDDQKSKAFRIMREQGANLALHGLVRKKSSELFAAYRDARDRLYDFDAVVAACLIAAHL 284 +E +I + P+ ++ +I I+++ + K+ D A + C N + N FI +RG + R CG+ D+++HEG YR F GEED+SHHGP N L+S +NL T + Q N R +F ++S +G+D TR+ YKD K KA R++ GANL LH +V ++ ++FA +RD R+ ++ F+AVVA C+I A+L Sbjct: 56 MEDRITNLLVPDMKVNDIIQLIKKM-KQAGKSDADEFSELDAELNAAPRFVCDACGNSEQNNFITDYARGDTICTGADGRGCGNVVQDHIVHEGSAYRKFEGEEDKSHHGPAPNKLFSTGHNLRTMISQDGEQSANLRRAAEFVEMNLSQMGKDER------RTRIGYKDQMKQKACRLIDHTGANLDLHEIVCNRAKKMFAEFRDLREHVHQFEAVVAGCIIDAYL 275
BLAST of NO12G02180 vs. NCBI_GenBank
Match: CCI47470.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 128.6 bits (322), Expect = 5.800e-26 Identity = 76/227 (33.48%), Postives = 121/227 (53.30%), Query Frame = 0 Query: 66 LERQIIAAVAPEKSLSYVIGRIQEIYDEIRKTKCDMIQGAPALRIGKQKCTNANCDNEDPNEFIP--SRGGAVA----CRRCGDCQSDYVIHEGEMYRNFTGEEDRSHHGPVLNPLYSASYNLGT---QFTGLRGQKRNTGRETDFSVSNIGRDAAAVGGTLATRVEYKDDQKSKAFRIMREQGANLALHGLVRKKSSELFAAYRDARDRLYDFDAVVAACLIAAHL 284 +E +I+ + PE +S V+ I+++ + K+ D A + NC N + N FI +RG + CG D+++HEG YR F GEED+SHHGP N L+S S+NL T Q + G R + ++S +G+D TR+ YKD K KA R++ +NL LH +V ++ ++FA +RD R+ ++ F+A+VA C+IAA++ Sbjct: 1 MEERIVNVLVPELKVSDVMMLIRKM-KQSGKSDADEFSELDAEPKTAPRFRCENCGNTEQNNFITDYARGDTICNGPDGNGCGTVVQDHIVHEGSAYRKFEGEEDKSHHGPAPNKLFSTSHNLRTLISQDGEMAGNLRRAAEFVEMNLSQMGKDER------RTRIGYKDQMKQKACRLIDHTVSNLDLHEIVGNRAKKMFAEFRDVREHVHQFEAMVAGCVIAAYI 220
BLAST of NO12G02180 vs. NCBI_GenBank
Match: XP_008605518.1 (hypothetical protein SDRG_01752 [Saprolegnia diclina VS20] >EQC40674.1 hypothetical protein SDRG_01752 [Saprolegnia diclina VS20]) HSP 1 Score: 128.3 bits (321), Expect = 7.600e-26 Identity = 89/275 (32.36%), Postives = 138/275 (50.18%), Query Frame = 0 Query: 18 QPTPPSSTSTTAGLEQSAWTAQEKRVLESARYKQLQSCAGNMAFELGCLERQIIAAVAPEKSLSYVIGRIQEIYDEIRKTKCDMIQGAPALRIGKQKCTNANCDNEDPNEFIP--SRGGAVAC----RRCGDCQSDYVIHEGEMYRNFTGEEDRSHHGPVLNPLYSASYNLGTQFTGLRGQKRNTGRETDF---SVSNIGRDAAAVGGTLATRVEYKDDQKSKAFRIMREQGANLALHGLVRKKSSELFAAYRDARDRLYDFDAVVAACLIAAHL 284 +P PP+ A ++ AQ K V+ + R + A M E +I + P+ +S +I I+++ + K+ D A + C N + N FI +RG + R CG+ D+++HEG YR F GEED+SHHGP N L+S +NL T + Q N R +F ++S +G+D TR+ YKD K KA R++ GANL LH +V ++ ++FA +RD R+ ++ F+AVVA C+I A+L Sbjct: 22 EPAPPAKKQKMA----PSYAAQPK-VVATTRQTDPKELALPM-------EDRITNLLVPDMKVSDIIQLIKKM-KQAGKSDADEFSELDAELNAAPRFVCDACGNAEQNNFITDYARGDTICTGPDGRGCGNVVQDHIVHEGSAYRKFEGEEDKSHHGPAPNKLFSTGHNLRTMISQDGEQSANLRRAAEFVEMNLSQMGKDER------RTRIGYKDQMKQKACRLIDHTGANLDLHEIVCNRAKKMFAEFRDLREHVHQFEAVVAGCIIDAYL 277
BLAST of NO12G02180 vs. NCBI_GenBank
Match: XP_002908205.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY61288.1 conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 128.3 bits (321), Expect = 7.600e-26 Identity = 77/232 (33.19%), Postives = 122/232 (52.59%), Query Frame = 0 Query: 66 LERQIIAAVAPEKSLSYVIGRIQEIYDEIRKTKCDMIQGAPALRIGKQKCTNANCDNEDPNEFIP--SRG----GAVACRRCGDCQSDYVIHEGEMYRNFTGEEDRSHHGPVLNPLYSASYNLGT---QFTGLRGQKRNTGRETDFSVSNIGRDAAAVGGTLATRVEYKDDQKSKAFRIMREQGANLALHGLVRKKSSELFAAYRDARDRLYDFDAVVAACLIAAHLEVLVE 289 +E +I+ + PE ++ V+ I+++ + K+ D A + + C N + N FI +RG V CG D+++HEG YR F GEED+SHHGP N L+S +NL T Q + G R + ++S +G+D TR+ YKD K KA R++ +NL LH +V ++ ++FA +RD R+ ++ FDA+VA C+IAA++E E Sbjct: 88 MEERIVNLLVPELKVNDVMLLIRKM-KQAGKSDADEFSELDAEQKTAPRFRCETCGNTEQNNFITDYARGDTICNGVDGNGCGTVVQDHIVHEGSAYRKFEGEEDKSHHGPAPNKLFSTGHNLRTLISQDGEMAGNLRRAAEFVEMNLSQMGKDER------RTRIGYKDQMKQKACRLIDHTMSNLDLHEIVGSRAKKMFAEFRDVREHVHQFDAMVAGCVIAAYMETSKE 312
BLAST of NO12G02180 vs. NCBI_GenBank
Match: OWZ07115.1 (hypothetical protein PHMEG_00020533 [Phytophthora megakarya]) HSP 1 Score: 128.3 bits (321), Expect = 7.600e-26 Identity = 76/232 (32.76%), Postives = 122/232 (52.59%), Query Frame = 0 Query: 66 LERQIIAAVAPEKSLSYVIGRIQEIYDEIRKTKCDMIQGAPALRIGKQKCTNANCDNEDPNEFIP--SRGGAVA----CRRCGDCQSDYVIHEGEMYRNFTGEEDRSHHGPVLNPLYSASYNLGT---QFTGLRGQKRNTGRETDFSVSNIGRDAAAVGGTLATRVEYKDDQKSKAFRIMREQGANLALHGLVRKKSSELFAAYRDARDRLYDFDAVVAACLIAAHLEVLVE 289 +E +I+ + PE ++ V+ I+++ + K+ D A + + C N + N FI +RG + CG D+++HEG YR F GEED+SHHGP N L+S +NL T Q + G R + ++S +G+D TR+ YKD K KA R++ +NL LH +V ++ ++FA +RD R+ ++ FDA+VA C+IAA++E E Sbjct: 84 MEERIVNLLVPELKVADVMLLIRKM-KQAGKSDADEFSELDAEQKTAPRFRCETCGNTEQNNFITDYARGDTICNGLDGNGCGTVVQDHIVHEGSAYRKFEGEEDKSHHGPAPNKLFSTGHNLRTLISQDGEMAGNLRRAAEFVEMNLSQMGKDER------RTRIGYKDQMKQKACRLIDHTMSNLDLHEIVGSRAKKMFAEFRDVREHVHQFDAMVAGCVIAAYMETSKE 308
BLAST of NO12G02180 vs. NCBI_GenBank
Match: XP_009523417.1 (hypothetical protein PHYSODRAFT_496563 [Phytophthora sojae] >EGZ20700.1 hypothetical protein PHYSODRAFT_496563 [Phytophthora sojae]) HSP 1 Score: 127.9 bits (320), Expect = 1.000e-25 Identity = 77/232 (33.19%), Postives = 122/232 (52.59%), Query Frame = 0 Query: 66 LERQIIAAVAPEKSLSYVIGRIQEIYDEIRKTKCDMIQGAPALRIGKQKCTNANCDNEDPNEFIP--SRG----GAVACRRCGDCQSDYVIHEGEMYRNFTGEEDRSHHGPVLNPLYSASYNLGT---QFTGLRGQKRNTGRETDFSVSNIGRDAAAVGGTLATRVEYKDDQKSKAFRIMREQGANLALHGLVRKKSSELFAAYRDARDRLYDFDAVVAACLIAAHLEVLVE 289 +E +I+ + PE ++ V+ I+++ + K+ D A + + C N + N FI +RG V CG D+++HEG YR F GEED+SHHGP N L+S +NL T Q + G R + ++S +G+D TR+ YKD K KA R++ +NL LH +V ++ ++FA +RD R+ ++ FDA+VA C+IAA++E E Sbjct: 90 MEERIVNLLVPELKVNDVMLLIRKM-KQAGKSDADEFSELDAEQKTAPRFRCETCGNTEQNNFITDYARGDTICNGVDGNGCGTVVQDHIVHEGSAYRKFEGEEDKSHHGPAPNKLFSTGHNLRTLISQDGEMAGNLRRAAEFVEMNLSQMGKDER------RTRIGYKDQMKQKACRLIDHTISNLDLHEIVGSRAKKMFAEFRDVREHVHQFDAMVAGCVIAAYMETSKE 314
BLAST of NO12G02180 vs. NCBI_GenBank
Match: ETI56703.1 (hypothetical protein, variant 1 [Phytophthora parasitica P1569] >ETK96458.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETM56179.1 hypothetical protein, variant 1 [Phytophthora parasitica]) HSP 1 Score: 127.9 bits (320), Expect = 1.000e-25 Identity = 77/232 (33.19%), Postives = 122/232 (52.59%), Query Frame = 0 Query: 66 LERQIIAAVAPEKSLSYVIGRIQEIYDEIRKTKCDMIQGAPALRIGKQKCTNANCDNEDPNEFIP--SRG----GAVACRRCGDCQSDYVIHEGEMYRNFTGEEDRSHHGPVLNPLYSASYNLGT---QFTGLRGQKRNTGRETDFSVSNIGRDAAAVGGTLATRVEYKDDQKSKAFRIMREQGANLALHGLVRKKSSELFAAYRDARDRLYDFDAVVAACLIAAHLEVLVE 289 +E +I+ + PE ++ V+ I+++ + K+ D A + + C N + N FI +RG V CG D+++HEG YR F GEED+SHHGP N L+S +NL T Q + G R + ++S +G+D TR+ YKD K KA R++ +NL LH +V ++ ++FA +RD R+ ++ FDA+VA C+IAA++E E Sbjct: 89 MEERIVNLLVPELKVNDVMLLIRKM-KQAGKSDADEFSELDAEQKTAPRFRCETCGNTEQNNFITDYARGDTICNGVDGNGCGTVVQDHIVHEGSAYRKFEGEEDKSHHGPAPNKLFSTGHNLRTLISQDGEMAGNLRRAAEFVEMNLSQMGKDER------RTRIGYKDQMKQKACRLIDHTISNLDLHEIVGSRAKKMFAEFRDVREHVHQFDAMVAGCVIAAYMETSKE 313 The following BLAST results are available for this feature:
BLAST of NO12G02180 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO12G02180 ID=NO12G02180|Name=NO12G02180|organism=Nannochloropsis oceanica|type=gene|length=1665bpback to top protein sequence of NO12G02180.1 >NO12G02180.1-protein ID=NO12G02180.1-protein|Name=NO12G02180.1|organism=Nannochloropsis oceanica|type=polypeptide|length=555bpback to top Synonyms
Publications
|