NO12G02180, NO12G02180 (gene) Nannochloropsis oceanica

Overview
NameNO12G02180
Unique NameNO12G02180
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1665
Alignment locationchr12:626969..628633 -

Link to JBrowse

Properties
Property NameValue
DescriptionC2h2 zinc finger protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr12genomechr12:626969..628633 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
BLAST of NO12G02180 vs. NCBI_GenBank
Match: EWM25824.1 (c2h2 zinc finger protein [Nannochloropsis gaditana])

HSP 1 Score: 663.7 bits (1711), Expect = 5.000e-187
Identity = 358/530 (67.55%), Postives = 398/530 (75.09%), Query Frame = 0
Query:    3 NPATRLPAAVATDNGQPTPPSSTSTTAGLEQSAWTAQEKRVLESARYKQLQSCAGNMAFELGCLERQIIAAVAPEKSLSYVIGRIQEIYDEIRKTKCDMIQGAPALRIGKQKCTNANCDNEDPNEFIPSRGGAVACRRCGDCQSDYVIHEGEMYRNFTGEEDRSHHGPVLNPLYSASYNLGTQFTGLRGQKRNTGRETDFSVSNIGRDAAAVGGTLATRVEYKDDQKSKAFRIMREQGANLALHGLVRKKSSELFAAYRDARDRLYDFDAVVAACLIAAHLEVLVEEGSDGSRATFSFACPACGVAGFTAKRDADKHCVVSMGPSYSSSXXXXXXXXXXSGAELPGLSGMGSEGEGEGGVLGTRKASSNVAVDPEIHKLNLAETRRLLLWVSQGAPYQVTAVDGICKGLQAELKSLAAKGNDSDDEEEQGVEGEKLGWNTSGKMERESEYKAGQLLIMASLKVLTGWCGKDQEAGRLFHDYLQGVKKRKSERDALREEXXXXXXXXXXXXEKPIFQELAFPCKINGGNSS 533
            N + R P   A              TAGLEQSAWT QEKRV++S RY+QL    G+ +FE  CLERQI+AAVAP++ L  V+GRI EIYDEIR+ K DMI G PALR  KQKCTN NCDN+DPN+FIPSRGGAVAC RCGDCQSDYVIHEGEMYRNF GEEDRSHHGP LNPLYSASYNLGTQFTGLRGQKRNTGRETDFSVSNIGRD AAVGGT+ATRVEYKDDQKSKAFRIMREQGANLALHGLVRKK++ELFAAYRDARDRL+DF+AVVAACLIAAHLEVLVEEGSDGS  TF+FACP CG+ GFT KRDA+KHCVVS GP+ SS               L   +G G    G G     RKAS   A DP++ K+ LAETRRLLLWVS+GAPYQ  AVDG+C GLQAE++S                         + ++ERES +KAGQLL+MASLKVLT WCG D EAGRLF DYLQGVKKRK ER A    XXXXXXXXXXXXE+PIFQEL+   K  G +++
Sbjct:    7 NGSGRAPVTEAGGGPDAQDGLRRPVTAGLEQSAWTQQEKRVIKSTRYRQLCELGGSASFEPACLERQIVAAVAPDRELPAVVGRIHEIYDEIRRNKKDMIDGVPALRAVKQKCTNTNCDNDDPNDFIPSRGGAVACMRCGDCQSDYVIHEGEMYRNFAGEEDRSHHGPALNPLYSASYNLGTQFTGLRGQKRNTGRETDFSVSNIGRDGAAVGGTMATRVEYKDDQKSKAFRIMREQGANLALHGLVRKKAAELFAAYRDARDRLFDFEAVVAACLIAAHLEVLVEEGSDGSGVTFAFACPGCGLRGFTVKRDAEKHCVVSTGPAGSSDSME---------GSLEHSAGAGGRSHGGGRPQSWRKASCEAAADPDVAKMGLAETRRLLLWVSEGAPYQQAAVDGVCAGLQAEMRSXXXXXXXXXXXXXXXXXXXXXXXXDTREVERESAFKAGQLLVMASLKVLTRWCGDDSEAGRLFFDYLQGVKKRKMERGAXXXXXXXXXXXXXXXXERPIFQELSVSLKSEGASNN 527          
BLAST of NO12G02180 vs. NCBI_GenBank
Match: XP_005856342.1 (c2h2 zinc finger protein, partial [Nannochloropsis gaditana CCMP526] >EKU20024.1 c2h2 zinc finger protein, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 343.2 bits (879), Expect = 1.500e-90
Identity = 169/227 (74.45%), Postives = 183/227 (80.62%), Query Frame = 0
Query:    3 NPATRLPAAVATDNGQPTPPSSTSTTAGLEQSAWTAQEKRVLESARYKQLQSCAGNMAFELGCLERQIIAAVAPEKSLSYVIGRIQEIYDEIRKTKCDMIQGAPALRIGKQKCTNANCDNEDPNEFIPSRGGAVACRRCGDCQSDYVIHEGEMYRNFTGEEDRSHHGPVLNPLYSASYNLGTQFTGLRGQKRNTGRETDFSVSNIGRDAAAVGGTLATRVEYKDDQK 230
            N + R P   A              TAGLEQSAWT QEKRV++S RY+QL    G+ +FE  CLERQI+AAVAP++ L  V+GRI EIYDEIR+ K DMI G PALR  KQKCTN NCDN+DPN+FIPSRGGAVAC RCGDCQSDYVIHEGEMYRNF GEEDRSHHGP LNPLYSASYNLGTQFTGLRGQKRNTGRETDFSVSNIGRD AAVGGT+ATRVEYKDDQK
Sbjct:   15 NGSGRAPVTEAGGGPDAQDGLRRPVTAGLEQSAWTQQEKRVIKSTRYRQLCELGGSASFEPACLERQIVAAVAPDRELPAVVGRIHEIYDEIRRNKKDMIDGVPALRAVKQKCTNTNCDNDDPNDFIPSRGGAVACMRCGDCQSDYVIHEGEMYRNFAGEEDRSHHGPALNPLYSASYNLGTQFTGLRGQKRNTGRETDFSVSNIGRDGAAVGGTMATRVEYKDDQK 241          
BLAST of NO12G02180 vs. NCBI_GenBank
Match: OQR95873.1 (hypothetical protein THRCLA_07499 [Thraustotheca clavata])

HSP 1 Score: 131.3 bits (329), Expect = 9.000e-27
Identity = 77/227 (33.92%), Postives = 121/227 (53.30%), Query Frame = 0
Query:   66 LERQIIAAVAPEKSLSYVIGRIQEIYDEIRKTKCDMIQGAPALRIGKQKCTNANCDNEDPNEFIP--SRGGAVAC----RRCGDCQSDYVIHEGEMYRNFTGEEDRSHHGPVLNPLYSASYNLGTQFTGLRGQKRNTGRETDF---SVSNIGRDAAAVGGTLATRVEYKDDQKSKAFRIMREQGANLALHGLVRKKSSELFAAYRDARDRLYDFDAVVAACLIAAHL 284
            +E +I   + P+  ++ +I  I+++  +  K+  D    A A      +     C N + N FI   +RG  +        CG+   D+++HEG  YR F GEED+SHHGP  N L+S  +NL T  +    Q  N  R  +F   ++S +G+D         TR+ YKD  K KA R++   GANL LH +V  ++ ++FA +RD R+ ++ F+AVVA C+I A+L
Sbjct:   50 MEERITNLLVPDMKVNDIIQLIKKM-KQAGKSDADEFSEADAEINAAPRFVCDVCGNSEQNNFITDYARGDTICTGADGHGCGNVVQDHIVHEGNAYRKFEGEEDKSHHGPAPNKLFSTGHNLRTMISQDGEQSANLRRAAEFVEMNLSQMGKDER------RTRIGYKDQMKQKAIRLIDHTGANLDLHEIVCNRAKKMFAEFRDLREHVHQFEAVVAGCIIDAYL 269          
BLAST of NO12G02180 vs. NCBI_GenBank
Match: OQR84852.1 (hypothetical protein ACHHYP_12638 [Achlya hypogyna])

HSP 1 Score: 130.6 bits (327), Expect = 1.500e-26
Identity = 77/227 (33.92%), Postives = 121/227 (53.30%), Query Frame = 0
Query:   66 LERQIIAAVAPEKSLSYVIGRIQEIYDEIRKTKCDMIQGAPALRIGKQKCTNANCDNEDPNEFIP--SRGGAVAC----RRCGDCQSDYVIHEGEMYRNFTGEEDRSHHGPVLNPLYSASYNLGTQFTGLRGQKRNTGRETDF---SVSNIGRDAAAVGGTLATRVEYKDDQKSKAFRIMREQGANLALHGLVRKKSSELFAAYRDARDRLYDFDAVVAACLIAAHL 284
            +E +I   + P+  ++ +I  I+++  +  K+  D      A      +     C N + N FI   +RG  +      R CG+   D+++HEG  YR F GEED+SHHGP  N L+S  +NL T  +    Q  N  R  +F   ++S +G+D         TR+ YKD  K KA R++   GANL LH +V  ++ ++FA +RD R+ ++ F+AVVA C+I A+L
Sbjct:   56 MEDRITNLLVPDMKVNDIIQLIKKM-KQAGKSDADEFSELDAELNAAPRFVCDACGNSEQNNFITDYARGDTICTGADGRGCGNVVQDHIVHEGSAYRKFEGEEDKSHHGPAPNKLFSTGHNLRTMISQDGEQSANLRRAAEFVEMNLSQMGKDER------RTRIGYKDQMKQKACRLIDHTGANLDLHEIVCNRAKKMFAEFRDLREHVHQFEAVVAGCIIDAYL 275          
BLAST of NO12G02180 vs. NCBI_GenBank
Match: CCI47470.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 128.6 bits (322), Expect = 5.800e-26
Identity = 76/227 (33.48%), Postives = 121/227 (53.30%), Query Frame = 0
Query:   66 LERQIIAAVAPEKSLSYVIGRIQEIYDEIRKTKCDMIQGAPALRIGKQKCTNANCDNEDPNEFIP--SRGGAVA----CRRCGDCQSDYVIHEGEMYRNFTGEEDRSHHGPVLNPLYSASYNLGT---QFTGLRGQKRNTGRETDFSVSNIGRDAAAVGGTLATRVEYKDDQKSKAFRIMREQGANLALHGLVRKKSSELFAAYRDARDRLYDFDAVVAACLIAAHL 284
            +E +I+  + PE  +S V+  I+++  +  K+  D      A      +    NC N + N FI   +RG  +        CG    D+++HEG  YR F GEED+SHHGP  N L+S S+NL T   Q   + G  R      + ++S +G+D         TR+ YKD  K KA R++    +NL LH +V  ++ ++FA +RD R+ ++ F+A+VA C+IAA++
Sbjct:    1 MEERIVNVLVPELKVSDVMMLIRKM-KQSGKSDADEFSELDAEPKTAPRFRCENCGNTEQNNFITDYARGDTICNGPDGNGCGTVVQDHIVHEGSAYRKFEGEEDKSHHGPAPNKLFSTSHNLRTLISQDGEMAGNLRRAAEFVEMNLSQMGKDER------RTRIGYKDQMKQKACRLIDHTVSNLDLHEIVGNRAKKMFAEFRDVREHVHQFEAMVAGCVIAAYI 220          
BLAST of NO12G02180 vs. NCBI_GenBank
Match: XP_008605518.1 (hypothetical protein SDRG_01752 [Saprolegnia diclina VS20] >EQC40674.1 hypothetical protein SDRG_01752 [Saprolegnia diclina VS20])

HSP 1 Score: 128.3 bits (321), Expect = 7.600e-26
Identity = 89/275 (32.36%), Postives = 138/275 (50.18%), Query Frame = 0
Query:   18 QPTPPSSTSTTAGLEQSAWTAQEKRVLESARYKQLQSCAGNMAFELGCLERQIIAAVAPEKSLSYVIGRIQEIYDEIRKTKCDMIQGAPALRIGKQKCTNANCDNEDPNEFIP--SRGGAVAC----RRCGDCQSDYVIHEGEMYRNFTGEEDRSHHGPVLNPLYSASYNLGTQFTGLRGQKRNTGRETDF---SVSNIGRDAAAVGGTLATRVEYKDDQKSKAFRIMREQGANLALHGLVRKKSSELFAAYRDARDRLYDFDAVVAACLIAAHL 284
            +P PP+     A     ++ AQ K V+ + R    +  A  M       E +I   + P+  +S +I  I+++  +  K+  D      A      +     C N + N FI   +RG  +      R CG+   D+++HEG  YR F GEED+SHHGP  N L+S  +NL T  +    Q  N  R  +F   ++S +G+D         TR+ YKD  K KA R++   GANL LH +V  ++ ++FA +RD R+ ++ F+AVVA C+I A+L
Sbjct:   22 EPAPPAKKQKMA----PSYAAQPK-VVATTRQTDPKELALPM-------EDRITNLLVPDMKVSDIIQLIKKM-KQAGKSDADEFSELDAELNAAPRFVCDACGNAEQNNFITDYARGDTICTGPDGRGCGNVVQDHIVHEGSAYRKFEGEEDKSHHGPAPNKLFSTGHNLRTMISQDGEQSANLRRAAEFVEMNLSQMGKDER------RTRIGYKDQMKQKACRLIDHTGANLDLHEIVCNRAKKMFAEFRDLREHVHQFEAVVAGCIIDAYL 277          
BLAST of NO12G02180 vs. NCBI_GenBank
Match: XP_002908205.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY61288.1 conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 128.3 bits (321), Expect = 7.600e-26
Identity = 77/232 (33.19%), Postives = 122/232 (52.59%), Query Frame = 0
Query:   66 LERQIIAAVAPEKSLSYVIGRIQEIYDEIRKTKCDMIQGAPALRIGKQKCTNANCDNEDPNEFIP--SRG----GAVACRRCGDCQSDYVIHEGEMYRNFTGEEDRSHHGPVLNPLYSASYNLGT---QFTGLRGQKRNTGRETDFSVSNIGRDAAAVGGTLATRVEYKDDQKSKAFRIMREQGANLALHGLVRKKSSELFAAYRDARDRLYDFDAVVAACLIAAHLEVLVE 289
            +E +I+  + PE  ++ V+  I+++  +  K+  D      A +    +     C N + N FI   +RG      V    CG    D+++HEG  YR F GEED+SHHGP  N L+S  +NL T   Q   + G  R      + ++S +G+D         TR+ YKD  K KA R++    +NL LH +V  ++ ++FA +RD R+ ++ FDA+VA C+IAA++E   E
Sbjct:   88 MEERIVNLLVPELKVNDVMLLIRKM-KQAGKSDADEFSELDAEQKTAPRFRCETCGNTEQNNFITDYARGDTICNGVDGNGCGTVVQDHIVHEGSAYRKFEGEEDKSHHGPAPNKLFSTGHNLRTLISQDGEMAGNLRRAAEFVEMNLSQMGKDER------RTRIGYKDQMKQKACRLIDHTMSNLDLHEIVGSRAKKMFAEFRDVREHVHQFDAMVAGCVIAAYMETSKE 312          
BLAST of NO12G02180 vs. NCBI_GenBank
Match: OWZ07115.1 (hypothetical protein PHMEG_00020533 [Phytophthora megakarya])

HSP 1 Score: 128.3 bits (321), Expect = 7.600e-26
Identity = 76/232 (32.76%), Postives = 122/232 (52.59%), Query Frame = 0
Query:   66 LERQIIAAVAPEKSLSYVIGRIQEIYDEIRKTKCDMIQGAPALRIGKQKCTNANCDNEDPNEFIP--SRGGAVA----CRRCGDCQSDYVIHEGEMYRNFTGEEDRSHHGPVLNPLYSASYNLGT---QFTGLRGQKRNTGRETDFSVSNIGRDAAAVGGTLATRVEYKDDQKSKAFRIMREQGANLALHGLVRKKSSELFAAYRDARDRLYDFDAVVAACLIAAHLEVLVE 289
            +E +I+  + PE  ++ V+  I+++  +  K+  D      A +    +     C N + N FI   +RG  +        CG    D+++HEG  YR F GEED+SHHGP  N L+S  +NL T   Q   + G  R      + ++S +G+D         TR+ YKD  K KA R++    +NL LH +V  ++ ++FA +RD R+ ++ FDA+VA C+IAA++E   E
Sbjct:   84 MEERIVNLLVPELKVADVMLLIRKM-KQAGKSDADEFSELDAEQKTAPRFRCETCGNTEQNNFITDYARGDTICNGLDGNGCGTVVQDHIVHEGSAYRKFEGEEDKSHHGPAPNKLFSTGHNLRTLISQDGEMAGNLRRAAEFVEMNLSQMGKDER------RTRIGYKDQMKQKACRLIDHTMSNLDLHEIVGSRAKKMFAEFRDVREHVHQFDAMVAGCVIAAYMETSKE 308          
BLAST of NO12G02180 vs. NCBI_GenBank
Match: XP_009523417.1 (hypothetical protein PHYSODRAFT_496563 [Phytophthora sojae] >EGZ20700.1 hypothetical protein PHYSODRAFT_496563 [Phytophthora sojae])

HSP 1 Score: 127.9 bits (320), Expect = 1.000e-25
Identity = 77/232 (33.19%), Postives = 122/232 (52.59%), Query Frame = 0
Query:   66 LERQIIAAVAPEKSLSYVIGRIQEIYDEIRKTKCDMIQGAPALRIGKQKCTNANCDNEDPNEFIP--SRG----GAVACRRCGDCQSDYVIHEGEMYRNFTGEEDRSHHGPVLNPLYSASYNLGT---QFTGLRGQKRNTGRETDFSVSNIGRDAAAVGGTLATRVEYKDDQKSKAFRIMREQGANLALHGLVRKKSSELFAAYRDARDRLYDFDAVVAACLIAAHLEVLVE 289
            +E +I+  + PE  ++ V+  I+++  +  K+  D      A +    +     C N + N FI   +RG      V    CG    D+++HEG  YR F GEED+SHHGP  N L+S  +NL T   Q   + G  R      + ++S +G+D         TR+ YKD  K KA R++    +NL LH +V  ++ ++FA +RD R+ ++ FDA+VA C+IAA++E   E
Sbjct:   90 MEERIVNLLVPELKVNDVMLLIRKM-KQAGKSDADEFSELDAEQKTAPRFRCETCGNTEQNNFITDYARGDTICNGVDGNGCGTVVQDHIVHEGSAYRKFEGEEDKSHHGPAPNKLFSTGHNLRTLISQDGEMAGNLRRAAEFVEMNLSQMGKDER------RTRIGYKDQMKQKACRLIDHTISNLDLHEIVGSRAKKMFAEFRDVREHVHQFDAMVAGCVIAAYMETSKE 314          
BLAST of NO12G02180 vs. NCBI_GenBank
Match: ETI56703.1 (hypothetical protein, variant 1 [Phytophthora parasitica P1569] >ETK96458.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETM56179.1 hypothetical protein, variant 1 [Phytophthora parasitica])

HSP 1 Score: 127.9 bits (320), Expect = 1.000e-25
Identity = 77/232 (33.19%), Postives = 122/232 (52.59%), Query Frame = 0
Query:   66 LERQIIAAVAPEKSLSYVIGRIQEIYDEIRKTKCDMIQGAPALRIGKQKCTNANCDNEDPNEFIP--SRG----GAVACRRCGDCQSDYVIHEGEMYRNFTGEEDRSHHGPVLNPLYSASYNLGT---QFTGLRGQKRNTGRETDFSVSNIGRDAAAVGGTLATRVEYKDDQKSKAFRIMREQGANLALHGLVRKKSSELFAAYRDARDRLYDFDAVVAACLIAAHLEVLVE 289
            +E +I+  + PE  ++ V+  I+++  +  K+  D      A +    +     C N + N FI   +RG      V    CG    D+++HEG  YR F GEED+SHHGP  N L+S  +NL T   Q   + G  R      + ++S +G+D         TR+ YKD  K KA R++    +NL LH +V  ++ ++FA +RD R+ ++ FDA+VA C+IAA++E   E
Sbjct:   89 MEERIVNLLVPELKVNDVMLLIRKM-KQAGKSDADEFSELDAEQKTAPRFRCETCGNTEQNNFITDYARGDTICNGVDGNGCGTVVQDHIVHEGSAYRKFEGEEDKSHHGPAPNKLFSTGHNLRTLISQDGEMAGNLRRAAEFVEMNLSQMGKDER------RTRIGYKDQMKQKACRLIDHTISNLDLHEIVGSRAKKMFAEFRDVREHVHQFDAMVAGCVIAAYMETSKE 313          
The following BLAST results are available for this feature:
BLAST of NO12G02180 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM25824.15.000e-18767.55c2h2 zinc finger protein [Nannochloropsis gaditana... [more]
XP_005856342.11.500e-9074.45c2h2 zinc finger protein, partial [Nannochloropsis... [more]
OQR95873.19.000e-2733.92hypothetical protein THRCLA_07499 [Thraustotheca c... [more]
OQR84852.11.500e-2633.92hypothetical protein ACHHYP_12638 [Achlya hypogyna... [more]
CCI47470.15.800e-2633.48unnamed protein product [Albugo candida][more]
XP_008605518.17.600e-2632.36hypothetical protein SDRG_01752 [Saprolegnia dicli... [more]
XP_002908205.17.600e-2633.19conserved hypothetical protein [Phytophthora infes... [more]
OWZ07115.17.600e-2632.76hypothetical protein PHMEG_00020533 [Phytophthora ... [more]
XP_009523417.11.000e-2533.19hypothetical protein PHYSODRAFT_496563 [Phytophtho... [more]
ETI56703.11.000e-2533.19hypothetical protein, variant 1 [Phytophthora para... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL126nonsL126Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL125nonsL125Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL124nonsL124Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR015ncniR015Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR014ncniR014Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR008ngnoR008Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR007ngnoR007Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR006ngnoR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010129NSK010129Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO12G02180.1NO12G02180.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|592348gene_5379Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100021g22gene4685Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO12G02180.1NO12G02180.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO12G02180 ID=NO12G02180|Name=NO12G02180|organism=Nannochloropsis oceanica|type=gene|length=1665bp
ATGGACAACCCCGCAACTCGTCTTCCAGCGGCAGTGGCAACCGACAACGG
GCAACCTACTCCTCCTTCGTCCACATCAACAACGGCGGGCTTGGAGCAGT
CGGCCTGGACTGCGCAAGAGAAACGCGTGCTCGAGTCGGCGCGGTACAAG
CAACTGCAAAGCTGTGCCGGCAACATGGCATTTGAGCTTGGGTGCCTGGA
GCGTCAAATCATCGCAGCAGTTGCTCCGGAAAAATCTCTTTCCTATGTGA
TTGGCCGCATCCAGGAAATCTACGACGAGATCCGCAAGACCAAGTGTGAC
ATGATTCAGGGCGCTCCTGCCCTGCGCATAGGCAAGCAGAAATGCACCAA
CGCCAATTGTGATAACGAAGACCCAAATGAATTTATCCCCAGTCGCGGTG
GGGCAGTGGCATGCAGGCGCTGTGGGGACTGTCAGTCTGATTATGTTATT
CATGAGGGCGAGATGTACCGCAACTTCACTGGGGAAGAGGATCGTTCGCA
TCACGGCCCGGTCCTGAACCCACTGTATTCGGCTTCGTATAATTTGGGGA
CGCAGTTTACTGGTTTGCGGGGCCAAAAACGCAACACGGGGCGAGAGACA
GACTTCAGCGTCAGCAATATTGGTCGGGACGCAGCTGCTGTTGGGGGGAC
ATTGGCGACGAGGGTGGAGTATAAGGATGATCAAAAGTCGAAGGCTTTCC
GGATAATGAGGGAGCAAGGGGCAAATCTAGCTCTGCATGGATTGGTGCGA
AAGAAGTCCTCGGAACTTTTTGCCGCTTATCGTGATGCGCGTGACCGGTT
GTATGATTTTGATGCCGTAGTGGCTGCATGTTTGATTGCTGCTCATCTGG
AGGTGCTGGTGGAGGAAGGTTCGGATGGGAGTCGGGCAACCTTTTCATTT
GCCTGCCCGGCTTGTGGCGTAGCCGGGTTTACTGCAAAGCGAGATGCCGA
TAAGCATTGCGTGGTCAGTATGGGACCAAGCTACAGCAGCAGTGGTGGCA
GCGGTGGTGGCGCCAGCAGTTGTAGTGGTGCGGAACTGCCAGGCCTCTCA
GGAATGGGATCAGAAGGGGAGGGTGAAGGAGGAGTGTTGGGCACGCGTAA
GGCGAGCAGCAACGTCGCAGTAGACCCGGAGATTCACAAATTGAACCTCG
CTGAGACGCGTCGGTTGCTGTTGTGGGTGTCGCAAGGTGCACCTTACCAA
GTGACGGCTGTGGATGGGATATGTAAGGGCTTGCAGGCGGAGCTGAAGTC
TCTGGCCGCGAAGGGAAACGACTCGGACGACGAGGAAGAGCAGGGGGTCG
AGGGGGAAAAATTAGGGTGGAATACGTCTGGGAAGATGGAGCGGGAGAGT
GAGTACAAGGCGGGTCAGTTGTTGATTATGGCTAGCCTCAAGGTGCTGAC
TGGGTGGTGCGGGAAGGATCAGGAGGCGGGTCGGCTTTTCCATGACTATC
TACAAGGTGTGAAGAAGCGAAAGAGTGAGCGAGATGCGTTGCGGGAGGAA
AAAGAACAAGACCGGAAGCGTCGTCGGCAACATGAAGAGAAGCCAATTTT
TCAGGAGCTCGCTTTTCCTTGCAAGATTAATGGCGGGAACAGCAGCAGCA
GCAGCAGCATTGGTAGAAGTAGTAATAGCAACTTCGGTGGCGAGCAGCAG
CATGCCTCTCCGTGA
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protein sequence of NO12G02180.1

>NO12G02180.1-protein ID=NO12G02180.1-protein|Name=NO12G02180.1|organism=Nannochloropsis oceanica|type=polypeptide|length=555bp
MDNPATRLPAAVATDNGQPTPPSSTSTTAGLEQSAWTAQEKRVLESARYK
QLQSCAGNMAFELGCLERQIIAAVAPEKSLSYVIGRIQEIYDEIRKTKCD
MIQGAPALRIGKQKCTNANCDNEDPNEFIPSRGGAVACRRCGDCQSDYVI
HEGEMYRNFTGEEDRSHHGPVLNPLYSASYNLGTQFTGLRGQKRNTGRET
DFSVSNIGRDAAAVGGTLATRVEYKDDQKSKAFRIMREQGANLALHGLVR
KKSSELFAAYRDARDRLYDFDAVVAACLIAAHLEVLVEEGSDGSRATFSF
ACPACGVAGFTAKRDADKHCVVSMGPSYSSSGGSGGGASSCSGAELPGLS
GMGSEGEGEGGVLGTRKASSNVAVDPEIHKLNLAETRRLLLWVSQGAPYQ
VTAVDGICKGLQAELKSLAAKGNDSDDEEEQGVEGEKLGWNTSGKMERES
EYKAGQLLIMASLKVLTGWCGKDQEAGRLFHDYLQGVKKRKSERDALREE
KEQDRKRRRQHEEKPIFQELAFPCKINGGNSSSSSSIGRSSNSNFGGEQQ
HASP*
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