NO12G02140, NO12G02140 (gene) Nannochloropsis oceanica

Overview
NameNO12G02140
Unique NameNO12G02140
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2062
Alignment locationchr12:611490..613551 +

Link to JBrowse

Properties
Property NameValue
DescriptionDolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr12genomechr12:611490..613551 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005783endoplasmic reticulum
GO:0016021integral component of membrane
GO:0016020membrane
GO:0005783endoplasmic reticulum
GO:0005737cytoplasm
Vocabulary: Biological Process
TermDefinition
GO:0006486protein glycosylation
GO:0009058biosynthetic process
GO:0006464cellular protein modification process
Vocabulary: Molecular Function
TermDefinition
GO:0004579dolichyl-diphosphooligosaccharide-protein glycotransferase activity
GO:0016740transferase activity
Vocabulary: INTERPRO
TermDefinition
IPR007676Ribophorin_I
Homology
BLAST of NO12G02140 vs. NCBI_GenBank
Match: EWM25852.1 (dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit [Nannochloropsis gaditana])

HSP 1 Score: 617.1 bits (1590), Expect = 4.600e-173
Identity = 308/451 (68.29%), Postives = 370/451 (82.04%), Query Frame = 0
Query:   24 VLLQACAFFVQAQQNLDIVRKVDLTMAVVRSQATIRVSELQGSYVVSFPAALAPKLSFLQVVLGGNQVLLPTRLPDAGDGLAHYDVQVSGGISEATFQISATFVDALKPLPAEIAQGEDQLVQYFDSHTVPSLYPTTTQTSTFKIGISHIESFTKINPYAMAGQELSFGPFPDVAGG-AESLSPLVIHYKNNAPFAKALQAIREIEVSHWGNVAFEDFLEVHHSGAVLKGGFSRLDYQVGGSPSAFQGLVAVLPPGARNIYYRDQIGNISSSLIRYRPHGVELDLQSRFPLFGGWKNQFYQGYSVPVEELLAC-EVEGDASQYALTVPFSVPFSELWVEELTVKVVLPEWATNIQVQLPFDVDEEYQTSRLTFLDTSMSGGRPVVVLKKRNVVAEHIQPMIITYSFPRRAMLLEPLYLVLAFFSFFLLCMLFARVDLRVTPDSEKGKKSKT 473
            +LL +C FF QAQ+N+++VRK+DL+ AVVR   TI  ++L G YVVSF   LAPKLSFLQ+ + GNQ L   RLPDAGDGLAH+  +V  G++EA   +  T   AL P+PAEI   E+QLVQY DSHT PSLYPT  QT+TF +G+SHIESFTK +PY+  G++L FGP  D+ GG A SLSP+ IHY+NNAPF KALQAIREIEVSHWGNVAFEDF+EV H+GA LKGGFSRLD+Q  G+PSA +GLVAVLP GAR+IYYRDQIGNIS+S+I++ P GVEL+LQSRFPL GGWKNQFYQGYSVPV+ELL      G   ++ LTVPFSVPF E+WVE+LTVKVVLPEWA +++V++PF VDEE+QT RLTFLD+S+SGGRPV++LKKRNVVAEH+QPM+++YSFP RAMLLEPLYLVLAFFSFFL+CM+FARVDLR+  D  K KKSKT
Sbjct:   22 LLLCSCTFFAQAQKNIEVVRKIDLSSAVVRIDMTILANDLNGKYVVSFAKHLAPKLSFLQIAM-GNQPLPWIRLPDAGDGLAHFQAEVPQGMTEAKLTVFGTLAGALVPVPAEIELTENQLVQYLDSHTFPSLYPTARQTTTFALGVSHIESFTKRDPYSRTGKDLVFGPITDIEGGAAASLSPITIHYQNNAPFVKALQAIREIEVSHWGNVAFEDFVEVKHAGAALKGGFSRLDFQARGAPSAVRGLVAVLPLGARSIYYRDQIGNISTSVIQHGPDGVELNLQSRFPLVGGWKNQFYQGYSVPVQELLTVGPSSGGVRRFTLTVPFSVPFPEVWVEDLTVKVVLPEWAADVRVEIPFSVDEEHQTHRLTFLDSSLSGGRPVLILKKRNVVAEHMQPMVLSYSFPTRAMLLEPLYLVLAFFSFFLVCMIFARVDLRINADGGK-KKSKT 470          
BLAST of NO12G02140 vs. NCBI_GenBank
Match: OQS02629.1 (l-threonine ammonia-lyase [Thraustotheca clavata])

HSP 1 Score: 317.8 bits (813), Expect = 5.800e-83
Identity = 180/448 (40.18%), Postives = 271/448 (60.49%), Query Frame = 0
Query:   38 NLDIVRKVDLTMAVVRSQATIRVSELQGS---YVVSFPAALAPKLSFLQVVLGGNQVL-LPTRLPDAGDGLAHYDVQVSGGIS---EATFQISATFVDALKPLPAEIAQGEDQLVQYFDSHTVPSLYPTTTQTSTFKIGISHIESFTKINPYAMAGQELSFGPF--PDVAGGAESLSPLVIHYKNNAPFAKALQAIREIEVSHWGNVAFEDFLEVHHSGAVLKGGFSRLDY-QVGGSPSAFQGLVAVLPPGARNIYYRDQIGNISSSLIRYRPHGVELDLQSRFPLFGGWKNQFYQGYSVPVEELLACEVEGDASQYALTVPFSVPFSELWVEELTVKVVLPEWATNIQVQLPFDVDEEYQTSRLTFLDTSMSGGRPVVVLKKRNVVAEHIQPMIITYSFPRRAMLLEPLYLVLAFFSFFLLCMLFARVDLRVTPDS--EKGKKSKTQ 474
            N  + R+ DLT  + RSQ  I  ++ + S   Y V+ P  L  +L+ L V    N VL +   + D    +  Y V+++  ++   E   ++ A +   + P PAEIAQ EDQLV +   H   S YPTTTQ++  K+    +E ++++ P  + G  L++GP+   +  G       L +H+KN+APF      ++EIEVS WG V+ E+ +++ ++GAVLKGGFSR DY  V  + ++F+ L AVLP  A N+YYRDQIGNI++S +R  P   EL+L +RFPLFGGWK Q+Y GYSVP + +L    E     Y L + F        V++LT+K++LPE A NI+V +PF VD++ QT+R T+LDT+M  GRPVV+L+K+NVV +H  P  +T+ +P + +  EPL L+  +F+FF++CM+  R+DL +T     EK K   T+
Sbjct:   26 NKSVKRQWDLTRPIARSQVDITFTDEEASIKTYQVAIPLYLDERLALLTVKGDKNVVLDVVKGVRDEAKHVQLYTVKLNSPVAKGDEGNLKVFAHYTRVMNPYPAEIAQNEDQLVLFIAQHLFMSPYPTTTQSTRVKLPSPRVEQYSEVPPVNLKGSILTYGPYENTEAYGSISYPKSLQVHFKNHAPFMTMTNLVKEIEVSLWGRVSTEEVVDLANTGAVLKGGFSRYDYMMVQATSASFRQLTAVLPKDAVNVYYRDQIGNITTSRMRQTPSRTELELNARFPLFGGWKTQYYLGYSVPTQSVLFRTGE----TYKLEMDFGTCIDGAAVDDLTLKIILPEGARNIKVDVPFHVDQQSQTNRQTYLDTAMV-GRPVVILQKKNVVPQHNVPFTVTFEYPSQFIYREPLLLIGGYFAFFVVCMILFRLDLSLTKSKAPEKTKVDATR 468          
BLAST of NO12G02140 vs. NCBI_GenBank
Match: OQR94994.1 (dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit [Achlya hypogyna])

HSP 1 Score: 317.0 bits (811), Expect = 9.900e-83
Identity = 185/443 (41.76%), Postives = 264/443 (59.59%), Query Frame = 0
Query:   38 NLDIVRKVDLTMAVVRSQATIRVSELQG---SYVVSFPAALAPKLSFLQVVLGGNQVLLPTRLPDAGDGLAHYDVQVSGGI---SEATFQISATFVDALKPLPAEIAQGEDQLVQYFDSHTVPSLYPTTTQTSTFKIGISHIESFTKINPYAMAGQELSFGPFPDVA--GGAESLSPLVIHYKNNAPFAKALQAIREIEVSHWGNVAFEDFLEVHHSGAVLKGGFSRLDYQVGGSPSA-FQGLVAVLPPGARNIYYRDQIGNISSSLIRYRPHGVELDLQSRFPLFGGWKNQFYQGYSVPVEELLACEVEGDASQYALTVPFSVPFSELWVEELTVKVVLPEWATNIQVQLPFDVDEEYQTSRLTFLDTSMSGGRPVVVLKKRNVVAEHIQPMIITYSFPRRAMLLEPLYLVLAFFSFFLLCMLFARVDLRVTPDSEKGKKSK 472
            N  + R  DLT  V RSQ  I   + +    +Y V+ P  L  +L+ L      N + +     D    +  Y VQ+   +   SE + ++ A +   L P PAEI Q EDQLV +   H   S Y TT QT+  K+  S +E ++++ P A+ G  L++GP+  V   G       LV+H+KN+APF      ++EIEVS WG V+ E+ +++ H+GAVLKGGFSR DY +  + SA F+ L AVLP    N+YYRDQIGNI++S +R+     EL+L +RFPLFGGWK Q+Y GYSVP + +L          Y L + FS       V++LT+KV+LPE A NI+V +PF VD + +T+R T+LDT++  GRPVVVL+K+NVVA+H  P  +T+ +P R +  EPL LV  FF+FF++CM+  R+DL +     KG K+K
Sbjct:   26 NKSVKRTWDLTRHVARSQVDITFGDDEAAVKAYDVAIPLYLDERLALLTAKADKNVLEVVKGKRDTEKEVQLYTVQLKTPVAKGSEGSIKLFAHYSRVLVPYPAEITQAEDQLVMFTAQHLFVSPYATTQQTTRVKLASSRVEQYSELPPVALKGTTLTYGPYEAVEAYGSLAFAKSLVVHFKNHAPFMTMTTLVKEIEVSLWGRVSTEEVVDLAHTGAVLKGGFSRFDYSMVQAQSASFRQLTAVLPKDVLNVYYRDQIGNITTSRMRHTATRTELELNARFPLFGGWKTQYYLGYSVPTQTVLM----RSGGTYKLEMDFSTCIDGAAVDDLTLKVILPEGARNIKVNVPFAVDVQGETTRQTYLDTALV-GRPVVVLQKQNVVAQHNVPFTVTFEYPGRFIYREPLLLVGGFFAFFVVCMVLFRLDLSLA----KGPKAK 459          
BLAST of NO12G02140 vs. NCBI_GenBank
Match: XP_008605530.1 (hypothetical protein SDRG_01762 [Saprolegnia diclina VS20] >EQC40686.1 hypothetical protein SDRG_01762 [Saprolegnia diclina VS20])

HSP 1 Score: 313.2 bits (801), Expect = 1.400e-81
Identity = 184/433 (42.49%), Postives = 255/433 (58.89%), Query Frame = 0
Query:   38 NLDIVRKVDLTMAVVRSQATIRVSELQGS---YVVSFPAALAPKLSFLQVVLGGNQVL-LPTRLPDAGDGLAHYDVQVSGGIS---EATFQISATFVDALKPLPAEIAQGEDQLVQYFDSHTVPSLYPTTTQTSTFKIGISHIESFTKINPYAMAGQELSFGPFPDVA--GGAESLSPLVIHYKNNAPFAKALQAIREIEVSHWGNVAFEDFLEVHHSGAVLKGGFSRLDYQVGGSPSAFQGLVAVLPPGARNIYYRDQIGNISSSLIRYRPHGVELDLQSRFPLFGGWKNQFYQGYSVPVEELLACEVEGDASQYALTVPFSVPFSELWVEELTVKVVLPEWATNIQVQLPFDVDEEYQTSRLTFLDTSMSGGRPVVVLKKRNVVAEHIQPMIITYSFPRRAMLLEPLYLVLAFFSFFLLCMLFARVDLRVT 462
            N  + R  DLT  V +SQ  I  ++   S   Y V+ P  L   L+ L      N  L +     DA      Y V +   I+   E + +I + +   + P PAEI Q EDQLV +   H   S Y TTTQT+  K+  S +E ++++ P ++ G  L++GP+ DVA  G       LV+H+KN+APF       +EIEVS WG V+ E+ +++ HSGAVLKGGFSR DY    S S F+   A LP    N+YYRDQIGNI++S +R      EL+L +RFPLFGGWK Q+Y GYSVP + +L    E     Y L + FS       V++LT+KV+LPE A NI+V +PF VD + +T+R T+LDT+M  GRPVV+LKK NVVA+H  P  +T+ +P R +  EPL L+  FF+FF++CM+  R+DL +T
Sbjct:   26 NKSVKRSWDLTRHVAKSQVDITFADDAASVKTYEVAIPLYLDEHLALLTAKADKNVALDVVKGKLDATKQAQLYTVHLKSPIAKGDEGSLKIISHYSRVMVPYPAEITQAEDQLVMFTAQHLFLSPYATTTQTTRVKLASSRVEQYSELAPVSLKGTTLTYGPYADVAAYGSLAFAKSLVVHFKNHAPFMTMTTLTKEIEVSLWGRVSTEEVVDLSHSGAVLKGGFSRFDYMQMPSAS-FRQFTATLPKDVLNVYYRDQIGNITTSRMRQTTSRTELELNARFPLFGGWKTQYYLGYSVPTQTVLFRSGE----TYKLEMDFSTCIDGASVDDLTLKVILPEGARNIKVHVPFSVDVQGETTRQTYLDTAMV-GRPVVILKKTNVVAQHNVPFTVTFEYPSRFLYREPLLLIGGFFAFFVVCMVLFRLDLSLT 452          
BLAST of NO12G02140 vs. NCBI_GenBank
Match: XP_009514875.1 (hypothetical protein PHYSODRAFT_261542 [Phytophthora sojae] >EGZ27600.1 hypothetical protein PHYSODRAFT_261542 [Phytophthora sojae])

HSP 1 Score: 312.8 bits (800), Expect = 1.900e-81
Identity = 193/473 (40.80%), Postives = 274/473 (57.93%), Query Frame = 0
Query:   23 FVLLQACAFFVQAQQ---NLDIVRKVDLTMAVVRSQATIRVSELQG---SYVVSFPAALAPKLSFLQVVLGGNQV-LLPTRLPDAG-----DGLAHYDVQVSGGISE---ATFQISATFVDALKPLPAEIAQGEDQLVQYFDSHTVPSLYPTTTQTSTFKIGISHIESFTKINPYAMAGQELSFGPFPDV---AGGAESLSPLVIHYKNNAPFAKALQAIREIEVSHWGNVAFEDFLEVHHSGAVLKGGFSRLDY-QVGGSPSAFQGLVAVLPPGARNIYYRDQIGNISSSLIRYRPHG-----VELDLQSRFPLFGGWKNQFYQGYSVPVEELLACEVEGDASQYALTVPFSVPFSELWVEELTVKVVLPEWATNIQVQLPFDVDEEYQTSRLTFLDTSMSGGRPVVVLKKRNVVAEHIQPMIITYSFPRRAMLLEPLYLVLAFFSFFLLCMLFARVDLRVTPDSEKGKKSK 472
            F+LL A A     Q    N    R  DLT  VVR  +    S+       Y V+FP AL  +L+++    G     ++P     A      +  A Y V +   +++    + +++A F   L P PAE+ Q EDQLV +  SH + S Y T TQT+  K+   ++E      P +  G  ++ GP+ D+   AGG ++ SPL +HYKN+APF    +  REIEVS WG V+FE+  ++ H+GA LKGGFSR DY Q+    ++F  + A LP  + N+YYRDQIGNIS+S  R RP G      +L+ + RFPLFGGWK+Q+Y GYSVP   +L     GD  ++ L V FS P     V++LTVKV+LPE ATN+QV +PF +D   +T+R T+LDT  + GRPVV+L K+NVVA H  P  +T+ FP+  M+ EPL LV  F +FF++CM   R+D+ +   S + KK++
Sbjct:    5 FLLLAATAALASVQAEVINQSAKRTFDLTKHVVREHSEFSFSDADAEVTEYDVAFPRALESRLAYVSARCGKTPCEIVPATSKHAAKAKTPEDAALYTVLLKKPVAKGETGSVKVTAYFTRVLTPYPAEVTQKEDQLVLFDASHLISSPYLTKTQTTKLKLPSGNVEHVKAAEPISRKGSVVTLGPYTDIKAFAGGVDA-SPLSVHYKNHAPFMTITKLTREIEVSMWGRVSFEEVYDLEHTGAKLKGGFSRYDYVQLHQRGASFHEMYAHLPKDSVNVYYRDQIGNISTS--RLRPAGRTGSYQDLEFKPRFPLFGGWKSQWYLGYSVPTHSVLT--HVGD--KFKLEVDFSTPVQGASVDDLTVKVILPEGATNVQVNVPFSLDGTSETTRQTYLDTP-AIGRPVVILDKKNVVAAHNVPFEVTFEFPKHFMMHEPLLLVSGFLAFFIVCMFLFRLDISIAKKSVQKKKTE 469          
BLAST of NO12G02140 vs. NCBI_GenBank
Match: XP_012201125.1 (hypothetical protein SPRG_06356 [Saprolegnia parasitica CBS 223.65] >KDO28306.1 hypothetical protein SPRG_06356 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 311.2 bits (796), Expect = 5.400e-81
Identity = 184/433 (42.49%), Postives = 254/433 (58.66%), Query Frame = 0
Query:   38 NLDIVRKVDLTMAVVRSQATIRVSELQGS---YVVSFPAALAPKLSFLQVVLGGNQVL-LPTRLPDAGDGLAHYDVQVSGGIS---EATFQISATFVDALKPLPAEIAQGEDQLVQYFDSHTVPSLYPTTTQTSTFKIGISHIESFTKINPYAMAGQELSFGPFPDVA--GGAESLSPLVIHYKNNAPFAKALQAIREIEVSHWGNVAFEDFLEVHHSGAVLKGGFSRLDYQVGGSPSAFQGLVAVLPPGARNIYYRDQIGNISSSLIRYRPHGVELDLQSRFPLFGGWKNQFYQGYSVPVEELLACEVEGDASQYALTVPFSVPFSELWVEELTVKVVLPEWATNIQVQLPFDVDEEYQTSRLTFLDTSMSGGRPVVVLKKRNVVAEHIQPMIITYSFPRRAMLLEPLYLVLAFFSFFLLCMLFARVDLRVT 462
            N  + R  DLT  V +SQ  I  ++   S   Y V+ P  L   L+ L      N  L +     DA      Y V +   I+   E + +I + +   + P PAEI Q EDQLV +   H   S Y TTTQT+  K+  S +E +++  P ++ G  L++GP+ DVA  G       LV+H+KN+APF       +EIEVS WG V+ E+ +++ HSGAVLKGGFSR DY    S S F+   A LP    N+YYRDQIGNI++S +R      EL+L +RFPLFGGWK Q+Y GYSVP + +L    E     Y L + FS       V++LT+KV+LPE A NI+V +PF VD + +T+R T+LDT+M  GRPVV+LKK NVVA+H  P  +T+ +P R +  EPL L+  FF+FF++CM+  R+DL +T
Sbjct:   26 NKSVKRSWDLTRHVAKSQVDITFADDTASVKTYEVAIPLYLDEHLALLTAKADKNVALDVVKGKLDATKQAQLYTVHLKSPIAKGDEGSLKIISHYSRVMVPYPAEITQAEDQLVMFTAQHLFLSPYATTTQTTRVKLASSRVEQYSEFAPVSLKGTTLTYGPYADVAAFGSLAFAKSLVVHFKNHAPFMTMTSLTKEIEVSLWGRVSTEEVVDLSHSGAVLKGGFSRFDYMQMPSAS-FRQFTATLPKDVLNVYYRDQIGNITTSRMRQTTSRTELELNARFPLFGGWKTQYYLGYSVPTQTVLFRSGE----SYKLEMDFSTCIDGASVDDLTLKVILPEGARNIKVHVPFAVDVQGETTRQTYLDTAMV-GRPVVLLKKTNVVAQHNVPFTVTFEYPSRFIYREPLLLIGGFFAFFVVCMVLFRLDLSLT 452          
BLAST of NO12G02140 vs. NCBI_GenBank
Match: ETI43908.1 (hypothetical protein F443_11303 [Phytophthora parasitica P1569] >ETK83956.1 hypothetical protein L915_11014 [Phytophthora parasitica] >ETP13732.1 hypothetical protein F441_11223 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 310.8 bits (795), Expect = 7.100e-81
Identity = 196/473 (41.44%), Postives = 273/473 (57.72%), Query Frame = 0
Query:   24 VLLQACAFFVQAQQ----NLDIVRKVDLTMAVVRSQATIRVSELQG---SYVVSFPAALAPKLSFLQVVLGGNQV-LLPTRLPDAG-----DGLAHYDVQVSGGISE---ATFQISATFVDALKPLPAEIAQGEDQLVQYFDSHTVPSLYPTTTQTSTFKIGISHIESFTKINPYAMAGQELSFGPFPDV---AGGAESLSPLVIHYKNNAPFAKALQAIREIEVSHWGNVAFEDFLEVHHSGAVLKGGFSRLDY-QVGGSPSAFQGLVAVLPPGARNIYYRDQIGNISSSLIRYRPHG-----VELDLQSRFPLFGGWKNQFYQGYSVPVEELLACEVEGDASQYALTVPFSVPFSELWVEELTVKVVLPEWATNIQVQLPFDVDEEYQTSRLTFLDTSMSGGRPVVVLKKRNVVAEHIQPMIITYSFPRRAMLLEPLYLVLAFFSFFLLCMLFARVDLRVTPDSEKGKKSK 472
            VLL A A  +   Q    N    R  DLT  VVR     + S+       Y V+FP AL   L+++    G     ++P     A      +  A Y V +   +++    + +++A F   L P PAEI Q EDQLV +  SH + S Y T TQT+  K+   ++ES     P +  G  ++ GP+ DV   A G ES SPL +HYKN++PF    +  REIEVS WG V+FE+  ++ H+GA LKGGFSR DY Q+    ++F  + A LP  + N+YYRDQIGNIS+S  R RP        +L+ + RFPLFGGWK+Q+Y GYSVP   +L     GD  ++ L V FS P     V++LTVKV+LPE ATN+QV +PF +D   +T+R T+LDT  + GRPVV+L K+NVVA H  P  +T+ FP++ ML EPL LV AF +FF++CM   R+D+ +     + KK++
Sbjct:    6 VLLLAAAMAMATAQGEVINQSAKRTFDLTKHVVREYTEFQFSDADAEVTEYDVAFPRALETHLAYVSARCGKTPCEIVPATQKHAAKAKTPEDAALYTVLLKKPVAKGETGSVKVTAYFTRVLTPYPAEITQKEDQLVLFDASHLITSPYLTKTQTTKLKLPSGNVESVRAAEPISRKGSVVTLGPYTDVKAFAAGVES-SPLSVHYKNHSPFMTITKLTREIEVSMWGRVSFEEVYDLEHTGAKLKGGFSRYDYVQLHQRSASFHEMHAHLPKDSVNVYYRDQIGNISTS--RLRPASRMGSHQDLEFKPRFPLFGGWKSQWYLGYSVPTYSVLT--HVGD--KFKLEVDFSTPVQGASVDDLTVKVILPEGATNVQVNVPFSLDSSSETTRQTYLDTP-AIGRPVVILDKKNVVASHNVPFEVTFDFPQQFMLHEPLLLVSAFLAFFIICMFLFRLDISIAKKPVQKKKTE 470          
BLAST of NO12G02140 vs. NCBI_GenBank
Match: XP_008907306.1 (hypothetical protein PPTG_13413 [Phytophthora parasitica INRA-310] >ETL37371.1 hypothetical protein L916_10913 [Phytophthora parasitica] >ETL90532.1 hypothetical protein L917_10818 [Phytophthora parasitica] >ETN07549.1 hypothetical protein PPTG_13413 [Phytophthora parasitica INRA-310] >ETO72563.1 hypothetical protein F444_11369 [Phytophthora parasitica P1976] >ETP41799.1 hypothetical protein F442_11210 [Phytophthora parasitica P10297] >KUF81663.1 hypothetical protein AM587_10010920 [Phytophthora nicotianae])

HSP 1 Score: 310.8 bits (795), Expect = 7.100e-81
Identity = 196/473 (41.44%), Postives = 273/473 (57.72%), Query Frame = 0
Query:   24 VLLQACAFFVQAQQ----NLDIVRKVDLTMAVVRSQATIRVSELQG---SYVVSFPAALAPKLSFLQVVLGGNQV-LLPTRLPDAG-----DGLAHYDVQVSGGISE---ATFQISATFVDALKPLPAEIAQGEDQLVQYFDSHTVPSLYPTTTQTSTFKIGISHIESFTKINPYAMAGQELSFGPFPDV---AGGAESLSPLVIHYKNNAPFAKALQAIREIEVSHWGNVAFEDFLEVHHSGAVLKGGFSRLDY-QVGGSPSAFQGLVAVLPPGARNIYYRDQIGNISSSLIRYRPHG-----VELDLQSRFPLFGGWKNQFYQGYSVPVEELLACEVEGDASQYALTVPFSVPFSELWVEELTVKVVLPEWATNIQVQLPFDVDEEYQTSRLTFLDTSMSGGRPVVVLKKRNVVAEHIQPMIITYSFPRRAMLLEPLYLVLAFFSFFLLCMLFARVDLRVTPDSEKGKKSK 472
            VLL A A  +   Q    N    R  DLT  VVR     + S+       Y V+FP AL   L+++    G     ++P     A      +  A Y V +   +++    + +++A F   L P PAEI Q EDQLV +  SH + S Y T TQT+  K+   ++ES     P +  G  ++ GP+ DV   A G ES SPL +HYKN++PF    +  REIEVS WG V+FE+  ++ H+GA LKGGFSR DY Q+    ++F  + A LP  + N+YYRDQIGNIS+S  R RP        +L+ + RFPLFGGWK+Q+Y GYSVP   +L     GD  ++ L V FS P     V++LTVKV+LPE ATN+QV +PF +D   +T+R T+LDT  + GRPVV+L K+NVVA H  P  +T+ FP++ ML EPL LV AF +FF++CM   R+D+ +     + KK++
Sbjct:    6 VLLLAAAMAMATAQGEVINQSAKRTFDLTKHVVREYTEFQFSDADAEVTEYDVAFPRALETHLAYVSARCGKTPCEIVPATQKHAAKAKTPEDAALYTVLLKKPVAKGETGSVKVTAYFTRVLTPYPAEITQKEDQLVLFDASHLITSPYLTKTQTTKLKLPSGNVESVRAAEPISRKGSVVTLGPYTDVKAFAAGVES-SPLSVHYKNHSPFMTITKLTREIEVSMWGRVSFEEVYDLEHTGAKLKGGFSRYDYVQLHQRSASFHEMHAHLPKDSVNVYYRDQIGNISTS--RLRPASRTGSHQDLEFKPRFPLFGGWKSQWYLGYSVPTYSVLT--HVGD--KFKLEVDFSTPVQGASVDDLTVKVILPEGATNVQVNVPFSLDSSSETTRQTYLDTP-AIGRPVVILDKKNVVASHNVPFEVTFDFPQQFMLHEPLLLVSAFLAFFIICMFLFRLDISIAKKPVQKKKTE 470          
BLAST of NO12G02140 vs. NCBI_GenBank
Match: ETM43801.1 (hypothetical protein L914_10852 [Phytophthora parasitica])

HSP 1 Score: 310.5 bits (794), Expect = 9.300e-81
Identity = 196/473 (41.44%), Postives = 273/473 (57.72%), Query Frame = 0
Query:   24 VLLQACAFFVQAQQ----NLDIVRKVDLTMAVVRSQATIRVSELQG---SYVVSFPAALAPKLSFLQVVLGGNQV-LLPTRLPDAG-----DGLAHYDVQVSGGISE---ATFQISATFVDALKPLPAEIAQGEDQLVQYFDSHTVPSLYPTTTQTSTFKIGISHIESFTKINPYAMAGQELSFGPFPDV---AGGAESLSPLVIHYKNNAPFAKALQAIREIEVSHWGNVAFEDFLEVHHSGAVLKGGFSRLDY-QVGGSPSAFQGLVAVLPPGARNIYYRDQIGNISSSLIRYRPHG-----VELDLQSRFPLFGGWKNQFYQGYSVPVEELLACEVEGDASQYALTVPFSVPFSELWVEELTVKVVLPEWATNIQVQLPFDVDEEYQTSRLTFLDTSMSGGRPVVVLKKRNVVAEHIQPMIITYSFPRRAMLLEPLYLVLAFFSFFLLCMLFARVDLRVTPDSEKGKKSK 472
            VLL A A  +   Q    N    R  DLT  VVR     + S+       Y V+FP AL   L+++    G     ++P     A      +  A Y V +   +++    + +++A F   L P PAEI Q EDQLV +  SH + S Y T TQT+  K+   ++ES     P +  G  ++ GP+ DV   A G ES SPL +HYKN++PF    +  REIEVS WG V+FE+  ++ H+GA LKGGFSR DY Q+    ++F  + A LP  + N+YYRDQIGNIS+S  R RP        +L+ + RFPLFGGWK+Q+Y GYSVP   +L     GD  ++ L V FS P     V++LTVKV+LPE ATN+QV +PF +D   +T+R T+LDT  + GRPVV+L K+NVVA H  P  +T+ FP++ ML EPL LV AF +FF++CM   R+D+ +     + KK++
Sbjct:    6 VLLLAAAMAMATAQGEVINQSAKRTFDLTKHVVREYTEFQFSDADAEVTEYDVAFPRALETHLAYVSARCGKTPCEIVPATQKHAAKAKTPEDAALYTVLLKKPVAKGETGSVKVTAYFTRVLTPYPAEITQKEDQLVLFDASHLITSPYLTKTQTTKLKLPSGNVESVRAAEPISRKGSVVTLGPYTDVKAFAAGVES-SPLSVHYKNHSPFMTITKLTREIEVSMWGRVSFEEVYDLEHTGAKLKGGFSRYDYVQLHQRSASFHEMHAHLPKDSVNVYYRDQIGNISTS--RLRPASRTGSHQDLEFKPRFPLFGGWKSQWYLGYSVPTYSVLT--HVGD--KFKLEVDFSTPVQGASVDDLTVKVILPEGATNVQVNVPFSLDSSSETTRQTYLDTP-AIGRPVVILDKKNVVASHNVPFEVTFDFPQQFMLHEPLLLVSAFLAFFIICMFLFRLDISIAMKPVQKKKTE 470          
BLAST of NO12G02140 vs. NCBI_GenBank
Match: XP_002997687.1 (dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit [Phytophthora infestans T30-4] >EEY67988.1 dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit [Phytophthora infestans T30-4])

HSP 1 Score: 309.3 bits (791), Expect = 2.100e-80
Identity = 194/473 (41.01%), Postives = 271/473 (57.29%), Query Frame = 0
Query:   24 VLLQACAFFVQAQQ----NLDIVRKVDLTMAVVRSQATIRVSELQG---SYVVSFPAALAPKLSFLQVVLGGNQV-LLPTRLPDAG-----DGLAHYDVQVSGGISE---ATFQISATFVDALKPLPAEIAQGEDQLVQYFDSHTVPSLYPTTTQTSTFKIGISHIESFTKINPYAMAGQELSFGPFPDV---AGGAESLSPLVIHYKNNAPFAKALQAIREIEVSHWGNVAFEDFLEVHHSGAVLKGGFSRLDY-QVGGSPSAFQGLVAVLPPGARNIYYRDQIGNISSSLIRYRPHG-----VELDLQSRFPLFGGWKNQFYQGYSVPVEELLACEVEGDASQYALTVPFSVPFSELWVEELTVKVVLPEWATNIQVQLPFDVDEEYQTSRLTFLDTSMSGGRPVVVLKKRNVVAEHIQPMIITYSFPRRAMLLEPLYLVLAFFSFFLLCMLFARVDLRVTPDSEKGKKSK 472
            VLL A A  +   Q    N    R  DLT  VVR     + S+       Y V+ P  L  +L+++    G     ++P     A      D  A Y V +   +++    + +++A F   L P PAEI Q EDQLV +  SH + S Y T TQT+  K+   ++ES     P +  G  ++ GP+ DV   A G ES SPL +HYKN+APF    +  RE+EVS WG V+FE+  ++ H+GA LKGGFSR DY Q+    ++F  + A LP  + N+YYRDQIGNIS+S  R RP G       L+ + RFPLFGGWK+Q+Y GYSVP   +L     GD  ++ L V FS P     V++LT+KV+LPE ATN+QV +PF +D   +T+R T+LDT  + GRPVV+L K+NVVA H  P  +T+ FP+  ML EPL LV AF + F++CM+  R+D+ +     + KK++
Sbjct:    6 VLLLAAAMAMATVQGDLINQSAKRTFDLTKHVVREYTEFQFSDADAEVTEYDVAIPRTLETRLAYVSARCGKTPCEIVPATHKHAAKVKTPDNAALYTVLLKKPVAKGDTGSVKVTAYFTRVLMPYPAEITQKEDQLVLFDASHLITSPYLTKTQTTKLKLPSGNVESVRAAQPISRKGSVVTLGPYTDVKSFAAGVES-SPLSVHYKNHAPFMTITKLTREVEVSMWGRVSFEEVYDMEHTGAKLKGGFSRYDYVQLHQRSASFHEMYAHLPKDSVNVYYRDQIGNISTS--RLRPAGRTSSHQNLEFKPRFPLFGGWKSQWYLGYSVPTYSVLT--HVGD--KFKLEVDFSTPVQGASVDDLTLKVILPEGATNVQVSVPFSLDSSSETTRQTYLDTP-AIGRPVVILDKKNVVASHNVPFEVTFDFPQHFMLHEPLLLVSAFLALFIICMILFRLDISIAKKPVQKKKTE 470          
The following BLAST results are available for this feature:
BLAST of NO12G02140 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM25852.14.600e-17368.29dolichyl-diphosphooligosaccharide-protein glycosyl... [more]
OQS02629.15.800e-8340.18l-threonine ammonia-lyase [Thraustotheca clavata][more]
OQR94994.19.900e-8341.76dolichyl-diphosphooligosaccharide-protein glycosyl... [more]
XP_008605530.11.400e-8142.49hypothetical protein SDRG_01762 [Saprolegnia dicli... [more]
XP_009514875.11.900e-8140.80hypothetical protein PHYSODRAFT_261542 [Phytophtho... [more]
XP_012201125.15.400e-8142.49hypothetical protein SPRG_06356 [Saprolegnia paras... [more]
ETI43908.17.100e-8141.44hypothetical protein F443_11303 [Phytophthora para... [more]
XP_008907306.17.100e-8141.44hypothetical protein PPTG_13413 [Phytophthora para... [more]
ETM43801.19.300e-8141.44hypothetical protein L914_10852 [Phytophthora para... [more]
XP_002997687.12.100e-8041.01dolichyl-diphosphooligosaccharide-protein glycosyl... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL126nonsL126Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL125nonsL125Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL124nonsL124Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR015ncniR015Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR014ncniR014Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR008ngnoR008Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR007ngnoR007Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR006ngnoR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010134NSK010134Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO12G02140.1NO12G02140.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|592309gene_5375Nannochloropsis oceanica (N. oceanica CCMP1779)gene
RPN1gene4689Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO12G02140.1NO12G02140.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO12G02140 ID=NO12G02140|Name=NO12G02140|organism=Nannochloropsis oceanica|type=gene|length=2062bp
AGACAAGGCACATTTTCCCACAGAGAGGATTAACAATGCAAGGGATGTCG
CAGCGGCCACCATTTGCTGCTGCTGGGGGACCCACGACAGCACTTCTCCT
GTTTGTTCTTCTCCAGGCATGTGCCTTCTTTGTGCAGGCGCAACAAAACC
TGGACATTGTGCGTAAGGTGGATCTGACCATGGCAGTGGTACGCTCTCAA
GCGACCATCCGGGTCAGCGAGTTGCAAGGGAGCTACGTCGTCTCCTTTCC
CGCGGCTCTTGCCCCGAAGCTCTCCTTCCTCCAAGTGGTGTTGGGCGGCA
ACCAAGTCCTTCTCCCGACCCGCCTGCCCGATGCAGGGGATGGTCTCGCG
CACTACGATGTCCAAGTGTCCGGAGGCATATCTGAAGCTACGTTCCAGAT
ATCTGCCACCTTTGTGGATGCTCTGAAGCCCCTGCCGGCTGAAATCGCCC
AAGGCGAGGACCAGCTTGTCCAGTACTTCGACAGCCACACTGTGCCTTCC
CTGTACCCGACGACGACGCAGACCTCGACGTTCAAGATTGGTATATCGCA
CATCGAAAGCTTCACCAAGATAAATCCGTACGCAATGGCGGGTCAAGAAC
TTTCATTTGGGCCTTTCCCGGACGTGGCAGGCGGCGCCGAATCGCTCTCT
CCACTCGTGATTCACTACAAAAACAACGCCCCCTTCGCCAAGGCCCTGCA
GGCCATTCGAGAAATTGAGGTCTCACATTGGGGCAACGTGGCATTTGAGG
ACTTCCTTGAAGTCCACCACTCGGGCGCCGTCCTCAAAGGCGGCTTCTCA
CGTTTGGATTATCAAGTGGGAGGTTCCCCCTCTGCGTTTCAGGGGCTGGT
GGCGGTCTTACCTCCTGGCGCACGCAACATTTACTACCGCGACCAAATTG
GAAATATCTCCTCTTCTTTGATCCGATATCGGCCGCACGGGGTGGAGCTG
GACTTGCAGTCGCGCTTCCCGCTGTTTGGTGGATGGAAGAATCAGTTTTA
TCAAGGTTACAGCGTGCCCGTAGAGGAGCTGCTGGCCTGTGAGGTGGAGG
GGGACGCAAGCCAGTATGCGTTGACTGTGCCTTTTTCAGTGCCGTTCTCG
GAGCTATGGGTCGAGGAGTTGACGGTAAAGGTGGTGCTGCCAGAGTGGGC
GACGAACATCCAAGTTCAGTTGCCGTTTGACGTGGACGAGGAGTACCAAA
CCAGCCGGCTAACCTTTCTTGATACATCTATGAGTGGTGGCCGGCCTGTG
GTGGTTCTCAAGAAGCGAAACGTGGTGGCGGAGCACATCCAGCCCATGAT
CATTACATATTCGTTCCCAAGGCGTGCCATGCTCTTGGAACCTTTGTATC
TGGTGCTAGCCTTCTTTTCCTTTTTCCTCCTCTGCATGCTATTTGCCCGG
GTCGATCTCCGCGTCACGCCCGACAGCGAGAAGGGAAAGAAAAGCAAAAC
TCAGTAATTTTGTTAGGAAACGGAGATGAAGAAGGGGCAAAAAAAATATG
CTTGGGGCTTTTATGGTATGGAATGGAATAGAACAAAAATGGATGAGGCG
CTGACTGCAGACAAAGCCTAGTGGGGAAAAGTTGGGAAGTTTGCGGCGGT
GTATTCATACAAGGGCATGTCCTTTCTGCCAGCTGACGAACAGGCAAAAC
AACGTAGAAAATGCCATGGACATGTATTTCAATCAATCTACCTGCTCATT
TTTGTCGCGCTTGGCGTGGCGAAGGGAATGGTATTGCATCTTTCAATTCA
ACTTTTATAACAATTCAGCTTTAAATATCTAACTCTTTGAGCCATCACGT
ATGGATTGCTGCTCTCATGTCCAAGCTACCCCCACAAAGAAATTATATCG
GGGAGGGTGAGAAGTCGTGAGAAATGCGGCGGGGAACGTGCATTCGCGTT
CCTTGCTGACCAAAAGGATACCGTCTATACAGCCTGAAAAGGCCCATGTA
TGTGACTCCCCGGCTGGTGCTGGCGCAAAGCGCATGGGCACGTTCAACCG
CGTGCGAGTGGGAAAATCTGGCCCATTTTCTTGCAAAAACGAAGTTATAC
GTGTCATCACGT
back to top

protein sequence of NO12G02140.1

>NO12G02140.1-protein ID=NO12G02140.1-protein|Name=NO12G02140.1|organism=Nannochloropsis oceanica|type=polypeptide|length=474bp
MQGMSQRPPFAAAGGPTTALLLFVLLQACAFFVQAQQNLDIVRKVDLTMA
VVRSQATIRVSELQGSYVVSFPAALAPKLSFLQVVLGGNQVLLPTRLPDA
GDGLAHYDVQVSGGISEATFQISATFVDALKPLPAEIAQGEDQLVQYFDS
HTVPSLYPTTTQTSTFKIGISHIESFTKINPYAMAGQELSFGPFPDVAGG
AESLSPLVIHYKNNAPFAKALQAIREIEVSHWGNVAFEDFLEVHHSGAVL
KGGFSRLDYQVGGSPSAFQGLVAVLPPGARNIYYRDQIGNISSSLIRYRP
HGVELDLQSRFPLFGGWKNQFYQGYSVPVEELLACEVEGDASQYALTVPF
SVPFSELWVEELTVKVVLPEWATNIQVQLPFDVDEEYQTSRLTFLDTSMS
GGRPVVVLKKRNVVAEHIQPMIITYSFPRRAMLLEPLYLVLAFFSFFLLC
MLFARVDLRVTPDSEKGKKSKTQ*
back to top
Synonyms
Publications