NO12G02040, NO12G02040 (gene) Nannochloropsis oceanica

Overview
NameNO12G02040
Unique NameNO12G02040
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1701
Alignment locationchr12:576991..578691 -

Link to JBrowse

Properties
Property NameValue
DescriptionU3 snornp-associated protein utp7
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr12genomechr12:576991..578691 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR036322WD40_repeat_dom_sf
IPR017986WD40_repeat_dom
IPR012952BING4_C_dom
IPR001680WD40_repeat
Homology
BLAST of NO12G02040 vs. NCBI_GenBank
Match: KFH72693.1 (hypothetical protein MVEG_02982 [Mortierella verticillata NRRL 6337])

HSP 1 Score: 505.4 bits (1300), Expect = 2.300e-139
Identity = 243/428 (56.78%), Postives = 318/428 (74.30%), Query Frame = 0
Query:   72 VSKLTDKRLKTKLKQSEKKFKEAALEAARSEMLLPQEAGYLESEGPMEQTWRLTQRDLKKHVDLQTASQIFSLDLPTLGPYTLDWALNGRHLLLGGRHGHVALIDAQRMNGTRELNLREPVRDVSFLHNEGMFAVAQKKYVYIYDNQGLELHCLRGHIDPMRLVFLPYHFLLASVGRAGWLKYQDVSTGQLVAEYGTKKGVCQAMRQNPHNGVVHLGHPNGVVSLWSPVMSQPLVSILCHRGPVTGIAVDREGRYMASAGMDGEVKLWDLRVYKQLHHYQFTSPPSSVDISQKGLLAVGFGSHVTVWKDALAQKVRSPYLRHDTPGNALDTVRFRPYEDVLGLGHKRGYVSMVVPGAGEPNFDTLEANPFQTRKQRREAEVHGLLDKLAPETIALNPTTVGAVDLQP-EVLIREQRELMEQADRRPAK 499
            V+K+ +K+LK  +K+ EK F+EAA +AA SE+LL ++ G+LE EG +E+T++L+QR L K VD+ T+ ++F+LDL   GPY +D+  NGRHLL+GGR GHVA  D Q  N   EL LRE VRDV++LHNE MFAVAQKKYVYIYD  G E+HCLR HI+  ++ FLPYHFLL ++G  G+LKYQD STG LVAE+ TK+G C  M QNP   ++HLGH NG V+LWSP M+ PLV + CHRGPVT +A+D  G YMA+AG+DG++KLWDLR YK +  Y   SP +S+ ISQ+GLL VGFG HV++W+D    K  SPY+ H  PG+A++ VRF P+EDVLG GH+ G+ S++VPGAGEPNFD LEANPFQT+KQR+E EVH LL+K+ PE I L+   VG +D  P +V+ +E++E    A+   AK
Sbjct:   32 VNKIQNKKLKGGIKRREKHFQEAAYKAANSELLLTEQGGFLEPEG-IEKTYQLSQRALGKEVDVATSHKMFNLDL-KFGPYAIDYTRNGRHLLIGGRKGHVAAFDWQGGNLACELQLRETVRDVTWLHNETMFAVAQKKYVYIYDKTGTEIHCLRNHIEVTKMDFLPYHFLLTTIGNTGYLKYQDTSTGNLVAEHRTKQGKCDVMAQNPATAIMHLGHGNGTVTLWSPNMTTPLVKMQCHRGPVTALAIDHAGTYMATAGLDGQLKLWDLRSYKPMQEYYTPSPAASLSISQRGLLGVGFGPHVSIWRDPFRTKQTSPYMNHLQPGSAVEDVRFVPFEDVLGFGHRNGFGSIIVPGAGEPNFDALEANPFQTKKQRQEMEVHSLLEKIQPEMITLDVGMVGKMDKAPVQVINKEKKEAWAAANPVEAK 457          
BLAST of NO12G02040 vs. NCBI_GenBank
Match: OAQ29660.1 (BING4CT-domain-containing protein [Mortierella elongata AG-77])

HSP 1 Score: 504.2 bits (1297), Expect = 5.200e-139
Identity = 246/417 (58.99%), Postives = 312/417 (74.82%), Query Frame = 0
Query:   72 VSKLTDKRLKTKLKQSEKKFKEAALEAARSEMLLPQEAGYLESEGPMEQTWRLTQRDLKKHVDLQTASQIFSLDLPTLGPYTLDWALNGRHLLLGGRHGHVALIDAQRMNGTRELNLREPVRDVSFLHNEGMFAVAQKKYVYIYDNQGLELHCLRGHIDPMRLVFLPYHFLLASVGRAGWLKYQDVSTGQLVAEYGTKKGVCQAMRQNPHNGVVHLGHPNGVVSLWSPVMSQPLVSILCHRGPVTGIAVDREGRYMASAGMDGEVKLWDLRVYKQLHHYQFTSPPSSVDISQKGLLAVGFGSHVTVWKDALAQKVRSPYLRHDTPGNALDTVRFRPYEDVLGLGHKRGYVSMVVPGAGEPNFDTLEANPFQTRKQRREAEVHGLLDKLAPETIALNPTTVGAVDLQP-EVLIREQRE 488
            V+KLTDK+LK  +K+ EK +KEAA +AA SE+LL +EAG+LE EG +E+T++L+QR L K VD+ T+ ++F+LDL   GPY LD+  NGRHLL+GGR GHVA  D Q      E+ LRE VRDV++LHNE MFAVAQKKYVYIYD QG E+HCLR HI+  +L FLPYHFLL SVG +G+LKYQD STG +VAE+ TK G C  M QNP   ++HLGH NG V+LWSP MS PLV + CHRGPVT +A+   G YMA+AG+DG++KLWDLR YK +  Y   +P SS+ +SQ+GLLAVGFG HV++WKD    K  SPY+ H   G+A++ V F P+EDVLG GH+ G  S++VPGAGE NFD LEANPFQT+KQR+E EVH LL+K+ PE I L+   VG +D  P +VL +E++E
Sbjct:   29 VNKLTDKKLKGTIKRREKTYKEAAYKAASSEILLTEEAGFLEPEG-IEKTYQLSQRSLAKEVDISTSHKMFNLDL-KFGPYALDYTRNGRHLLIGGRKGHVAAFDWQAGRLGCEMQLRETVRDVTWLHNETMFAVAQKKYVYIYDKQGTEIHCLRNHIEVNKLDFLPYHFLLTSVGNSGFLKYQDTSTGNVVAEHRTKLGKCDVMTQNPATAIMHLGHGNGTVTLWSPNMSTPLVKMQCHRGPVTAMAIGHSGTYMATAGLDGQLKLWDLRSYKPMQEYFTPTPASSLSVSQRGLLAVGFGPHVSIWKDPFKTKQTSPYMNHLQAGSAVEDVEFVPFEDVLGFGHRGGISSIIVPGAGEANFDALEANPFQTKKQRQEMEVHSLLEKIQPEMITLDVNHVGQMDKAPIQVLNKEKKE 443          
BLAST of NO12G02040 vs. NCBI_GenBank
Match: XP_018290545.1 (hypothetical protein PHYBLDRAFT_181856 [Phycomyces blakesleeanus NRRL 1555(-)] >OAD72505.1 hypothetical protein PHYBLDRAFT_181856 [Phycomyces blakesleeanus NRRL 1555(-)])

HSP 1 Score: 503.4 bits (1295), Expect = 8.900e-139
Identity = 238/415 (57.35%), Postives = 313/415 (75.42%), Query Frame = 0
Query:   74 KLTDKRLKTKLKQSEKKFKEAALEAARSEMLLPQEAGYLESEGPMEQTWRLTQRDLKKHVDLQTASQIFSLDLPTLGPYTLDWALNGRHLLLGGRHGHVALIDAQRMNGTRELNLREPVRDVSFLHNEGMFAVAQKKYVYIYDNQGLELHCLRGHIDPMRLVFLPYHFLLASVGRAGWLKYQDVSTGQLVAEYGTKKGVCQAMRQNPHNGVVHLGHPNGVVSLWSPVMSQPLVSILCHRGPVTGIAVDREGRYMASAGMDGEVKLWDLRVYKQLHHYQFTSPPSSVDISQKGLLAVGFGSHVTVWKDALAQKVRSPYLRHDTPGNALDTVRFRPYEDVLGLGHKRGYVSMVVPGAGEPNFDTLEANPFQTRKQRREAEVHGLLDKLAPETIALNPTTVGAV-DLQPEVLIREQRE 488
            KLTDK+LKTK K+ E + KEAA  AAR+E+LL ++AG+LESEG +E+T+   Q  L K  D+ T+ +IFSLDLP  GPY +D+  NGRHLLLGG+ GH+A  D Q      E +++E VRDV++LHNE M A AQKKYVYIYD  GLE+H ++ HI+  +L FLPYHFLLA+VG  G+LKYQD STGQLVAE+ T+ G C+ M QNP N V+HLGH NG V+LW+P MS PLV + CH+GPV  IA+D  G YMA++G+DG++K+WD+R +  +H Y    P +S+ ISQ+GLL VG+GSHVTVWKDAL  K +SPY++H  PG+++  + F PYEDVLG+GH +G  S+V+PG+GEPNFD+L ANP+QT+KQR+EAEVH LLDKL P  I LNP+ +G V  L  E +I++++E
Sbjct:   31 KLTDKKLKTKFKKQEAQIKEAAQAAARNELLLGEDAGFLESEG-VEKTFNYRQEQLAKETDINTSKKIFSLDLPEFGPYAIDYTRNGRHLLLGGKKGHLAAFDWQTGRLHFETHVKEIVRDVTWLHNETMLAAAQKKYVYIYDQTGLEIHRMKNHIEVNKLEFLPYHFLLATVGNGGYLKYQDTSTGQLVAEHRTRLGPCKTMTQNPWNAVIHLGHANGTVTLWAPTMSAPLVKMQCHKGPVQAIAIDNSGNYMATSGLDGQMKIWDIRKFDVVHEYFTPRPATSLSISQRGLLGVGWGSHVTVWKDALRTKQQSPYMQHLQPGSSIADIHFCPYEDVLGVGHDKGMSSIVIPGSGEPNFDSLAANPYQTKKQRQEAEVHSLLDKLQPAMITLNPSHIGKVTKLTKEDIIKQRQE 444          
BLAST of NO12G02040 vs. NCBI_GenBank
Match: ORY97678.1 (WD40-repeat-containing domain protein [Syncephalastrum racemosum])

HSP 1 Score: 489.6 bits (1259), Expect = 1.300e-134
Identity = 231/402 (57.46%), Postives = 303/402 (75.37%), Query Frame = 0
Query:   74 KLTDKRLKTKLKQSEKKFKEAALEAARSEMLLPQEAGYLESEGPMEQTWRLTQRDLKKHVDLQTASQIFSLDLPTLGPYTLDWALNGRHLLLGGRHGHVALIDAQRMNGTRELNLREPVRDVSFLHNEGMFAVAQKKYVYIYDNQGLELHCLRGHIDPMRLVFLPYHFLLASVGRAGWLKYQDVSTGQLVAEYGTKKGVCQAMRQNPHNGVVHLGHPNGVVSLWSPVMSQPLVSILCHRGPVTGIAVDREGRYMASAGMDGEVKLWDLRVYKQLHHYQFTSPPSSVDISQKGLLAVGFGSHVTVWKDALAQKVRSPYLRHDTPGNALDTVRFRPYEDVLGLGHKRGYVSMVVPGAGEPNFDTLEANPFQTRKQRREAEVHGLLDKLAPETIALNPTTVGAVD 476
            K+ DK+L+ KLK  E++ K AA  AAR+E+L  +EAG+LE+EG +E+T+   Q  L K VD+ TAS+IF+LDLP  GPY+LD++ NGRHLL+GG+ GH+A  D Q      E +++E    V +LHNE + A AQKKYVYIYDN GLE+H ++ H D  +L FLPYHFLL +VG  G+LKY D STGQLV+E+ TK G C+AM QNP N V+HLGH NG V+LWSP M +PLV +L H+GPVT IAVDR G YMA+ GMD +VK+WD+R Y+ ++ Y      +SV ISQ+GLL VG+G+ VT+WKDAL+ K +SPY++H    + ++ ++F PYEDVLG+GHK+G  SMVVPGAGEPNFD LEANPFQT+KQR+EAEVH LLDKL P+ IAL+P+ +G ++
Sbjct:   44 KVADKKLRKKLKDQEERIKNAAQSAARAEILQQEEAGFLEAEG-LEKTYAYRQDQLAKDVDINTASKIFNLDLPDFGPYSLDYSRNGRHLLIGGKKGHLAAFDWQTGRLHFETHVKEDTHAVKWLHNETLLAAAQKKYVYIYDNSGLEIHRMKQHTDVRKLDFLPYHFLLVTVGETGYLKYHDTSTGQLVSEHRTKLGPCRAMTQNPWNAVMHLGHGNGTVTLWSPSMGKPLVKMLSHKGPVTSIAVDRRGYYMATTGMDSKVKIWDIRKYEVVNEYYTPKAATSVSISQRGLLGVGWGNRVTIWKDALSTKAQSPYMQHLQESSPINDIQFVPYEDVLGVGHKKGLTSMVVPGAGEPNFDALEANPFQTKKQRQEAEVHSLLDKLQPDMIALDPSHIGKME 444          
BLAST of NO12G02040 vs. NCBI_GenBank
Match: PKY41105.1 (BING4CT-domain-containing protein [Rhizophagus irregularis])

HSP 1 Score: 488.0 bits (1255), Expect = 3.900e-134
Identity = 247/502 (49.20%), Postives = 337/502 (67.13%), Query Frame = 0
Query:   64 EGELGANVVSKLTDKRLKTKLKQSEKKFKEAALEAARSEMLLPQEAGYLESEGPMEQTWRLTQRDLKKHVDLQTASQIFSLDLPTLGPYTLDWALNGRHLLLGGRHGHVALIDAQRMNGTRELNLREPVRDVSFLHNEGMFAVAQKKYVYIYDNQGLELHCLRGHIDPMRLVFLPYHFLLASVGRAGWLKYQDVSTGQLVAEYGTKKGVCQAMRQNPHNGVVHLGHPNGVVSLWSPVMSQPLVSILCHRGPVTGIAVDREGRYMASAGMDGEVKLWDLRVYKQLHHYQFTSPPSSVDISQKGLLAVGFGSHVTVWKDALAQKVRSPYLRHDTPGNALDTVRFRPYEDVLGLGHKRGYVSMVVPGAGEPNFDTLEANPFQTRKQRREAEVHGLLDKLAPETIALNPTTVGAVDLQPEVLIREQRELMEQADRRPAKPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLKQKIDKAREEAKQKKETDTRNRQAEEAPRALQRF 566
            E ++ +  + K+ +K+LK  L + EK   EAA++AARSE+LL +E GYLE+EG +E+T+ +TQ+ L +HVD  +  +IF L LPT GPY+LD+  NGRHL++GGR GHV  ID        E++L+E VRDV +LHNE  +AVAQKKYV+IYD+ GLE+H L+ HI+  +L FLPYHFLL SVG AGWLKYQD STG+LVAE  TK G C A+ QNP N ++HLGH NG V+LWSP MS PLV +L H+GPV  +AVD  G+YMA++G+DG++KLWD+R YK L  Y   +P SS+ ISQ GLL VG+G HVT+WKDA   K +SPY+ H   G+ +  + F P++DVLGLGH  G  S+++PG+GEPN D+LEANP+Q++KQR+EAEVH LLDK+ PE I+L+ T +G VD   + L+  +R   ++A R   +                               L  Q+  K  +EA++K+     N   ++ P+AL+RF
Sbjct:   25 ERKISSRQLKKIKNKKLKGTLDRIEKVSNEAAIKAARSEILLTEEPGYLEAEG-IEKTFNITQKQLSEHVDEDSTKKIFDLKLPTFGPYSLDYTRNGRHLVIGGRKGHVMSIDWMENKIKSEIHLKETVRDVKWLHNELFYAVAQKKYVFIYDHNGLEVHRLKKHIEVNKLDFLPYHFLLVSVGSAGWLKYQDTSTGKLVAELRTKLGGCDAIAQNPWNAIMHLGHYNGTVTLWSPNMSTPLVKMLTHKGPVKAVAVDHTGKYMATSGLDGQLKLWDIRTYKPLQQYYTRTPASSLSISQLGLLGVGWGPHVTIWKDAFLTKQQSPYMNHLQVGSQIQDIHFCPFDDVLGLGHSYGISSIIIPGSGEPNLDSLEANPYQSKKQRQEAEVHSLLDKIQPEMISLDSTFIGKVDGASKDLLDMERNEEQKAQRANEEKWVPKNKARGKNSSLKRYLRKKQKNVIDERKLKIQQRIKQEKEARRKRIMG--NEDDKDRPKALERF 523          
BLAST of NO12G02040 vs. NCBI_GenBank
Match: ODQ75850.1 (hypothetical protein LIPSTDRAFT_102600 [Lipomyces starkeyi NRRL Y-11557])

HSP 1 Score: 487.6 bits (1254), Expect = 5.100e-134
Identity = 230/426 (53.99%), Postives = 314/426 (73.71%), Query Frame = 0
Query:   74 KLTDKRLKTKLKQSEKKFKEAALEAARSEMLLPQEAGYLESEGPMEQTWRLTQRDLKKHVDLQTASQIFSLDLPTLGPYTLDWALNGRHLLLGGRHGHVALIDAQRMNGTRELNLREPVRDVSFLHNEGMFAVAQKKYVYIYDNQGLELHCLRGHIDPMRLVFLPYHFLLASVGRAGWLKYQDVSTGQLVAEYGTKKGVCQAMRQNPHNGVVHLGHPNGVVSLWSPVMSQPLVSILCHRGPVTGIAVDREGRYMASAGMDGEVKLWDLRVYKQLHHYQFTSPPSSVDISQKGLLAVGFGSHVTVWKDALAQKVRSPYLRHDTPGNALDTVRFRPYEDVLGLGHKRGYVSMVVPGAGEPNFDTLEANPFQTRKQRREAEVHGLLDKLAPETIALNPTTVGAVDLQ-PEVLIREQRELMEQADRRPAK 499
            K+ D++L+  +K++++K+K+A   A  +E+LL ++AG+LE+EG ME+T++ TQ +L KHVD+ TA++ F L L   GPY +D+  NGR LLLGGR GHVA  D +      EL++ E VRDV +LHN+  FAVAQKKYVYIYD  G E+HCL+ HI+   + FLPYHFLLA+VG AGWLKYQDVSTG+ V E+ TK G   +M QNP+N ++HLGH NG VSLW+P  S  LV IL H+GPV   +VDR GRYMA+AG D ++K+WD+R+YK++H Y   +PP+++DIS +GLLAV +G HVT+WKDA   K +SPY+ H +PG+ ++ +RF P++D+LG GH  G+ S++VPGAGEPNFD LE NP++T +QRREAEVHGLL+KL PE IAL+P  +G VD + P+   R+Q  ++E  D    K
Sbjct:   39 KIKDRKLRANIKRTDQKYKDAIRAAKSTELLLQEDAGFLEAEG-MEKTYKFTQDELIKHVDVTTANKGFELKLEHFGPYEMDYMRNGRKLLLGGRKGHVAAFDFREGTLDTELHVNETVRDVKYLHNDQYFAVAQKKYVYIYDKSGTEIHCLKKHIEVTNMEFLPYHFLLATVGNAGWLKYQDVSTGEQVCEFRTKMGPTTSMTQNPYNAIIHLGHTNGTVSLWAPSSSTSLVRILSHKGPVRASSVDRGGRYMATAGADCQLKIWDVRMYKEVHAYYTPTPPTALDISDRGLLAVSWGPHVTIWKDAFRTKQKSPYMTHLSPGSTVNDIRFCPFDDLLGFGHDEGFTSLIVPGAGEPNFDALEINPYETLQQRREAEVHGLLNKLKPEMIALDPNFIGNVDPRAPDE--RKQALVLETTDETDKK 461          
BLAST of NO12G02040 vs. NCBI_GenBank
Match: EXX59722.1 (Utp7p [Rhizophagus irregularis DAOM 197198w] >GBC11856.1 U3 small nucleolar RNA-associated protein 7 [Rhizophagus irregularis DAOM 181602] >PKC06712.1 BING4CT-domain-containing protein [Rhizophagus irregularis] >PKC76102.1 BING4CT-domain-containing protein [Rhizophagus irregularis] >PKY16371.1 BING4CT-domain-containing protein [Rhizophagus irregularis] >POG72335.1 putative U3 small nucleolar RNA-associated protein [Rhizophagus irregularis DAOM 181602=DAOM 197198])

HSP 1 Score: 486.9 bits (1252), Expect = 8.600e-134
Identity = 247/502 (49.20%), Postives = 337/502 (67.13%), Query Frame = 0
Query:   64 EGELGANVVSKLTDKRLKTKLKQSEKKFKEAALEAARSEMLLPQEAGYLESEGPMEQTWRLTQRDLKKHVDLQTASQIFSLDLPTLGPYTLDWALNGRHLLLGGRHGHVALIDAQRMNGTRELNLREPVRDVSFLHNEGMFAVAQKKYVYIYDNQGLELHCLRGHIDPMRLVFLPYHFLLASVGRAGWLKYQDVSTGQLVAEYGTKKGVCQAMRQNPHNGVVHLGHPNGVVSLWSPVMSQPLVSILCHRGPVTGIAVDREGRYMASAGMDGEVKLWDLRVYKQLHHYQFTSPPSSVDISQKGLLAVGFGSHVTVWKDALAQKVRSPYLRHDTPGNALDTVRFRPYEDVLGLGHKRGYVSMVVPGAGEPNFDTLEANPFQTRKQRREAEVHGLLDKLAPETIALNPTTVGAVDLQPEVLIREQRELMEQADRRPAKPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLKQKIDKAREEAKQKKETDTRNRQAEEAPRALQRF 566
            E ++ +  + K+ +K+LK  L + EK   EAA++AARSE+LL +E GYLE+EG +E+T+ +TQ+ L ++VD  +  +IF L LPT GPY+LD+  NGRHL++GGR GHV  ID        E++L+E VRDV +LHNE  +AVAQKKYV+IYD+ GLE+H L+ HI+  +L FLPYHFLL SVG AGWLKYQD STG+LVAE  TK G C A+ QNP N ++HLGH NG V+LWSP MS PLV +L H+GPV  +AVD  G+YMA++G+DG++KLWD+R YK L  Y   +P SS+ ISQ GLL VG+G HVT+WKDA   K +SPY+ H   G+ +  + F P++DVLGLGH  G  S+++PG+GEPN D+LEANP+Q++KQR+EAEVH LLDK+ PE I+L+ T +G VD   + L+  +R   ++A R   +                               L  QK  K  +EA++K+     N   ++ P+AL+RF
Sbjct:   25 ERKISSRQLKKIKNKKLKGTLDRIEKVSNEAAIKAARSEILLTEEPGYLEAEG-IEKTFNITQKQLSENVDEDSTKKIFDLKLPTFGPYSLDYTRNGRHLVIGGRKGHVMSIDWMENKIKSEIHLKETVRDVKWLHNELFYAVAQKKYVFIYDHNGLEVHRLKKHIEVNKLDFLPYHFLLVSVGSAGWLKYQDTSTGKLVAELRTKLGGCDAIAQNPWNAIMHLGHYNGTVTLWSPNMSTPLVKMLTHKGPVKAVAVDHTGKYMATSGLDGQLKLWDIRTYKPLQQYYTRTPASSLSISQLGLLGVGWGPHVTIWKDAFLTKQQSPYMNHLQVGSQIQDIHFCPFDDVLGLGHSYGISSIIIPGSGEPNLDSLEANPYQSKKQRQEAEVHSLLDKIQPEMISLDSTFIGKVDGASKDLLDMERNEEQKAQRANEEKWVPKNKARGKNSSLKRYLRKKQKNVIDERKLKIQKRIKQEKEARRKRIMG--NEDDKDRPKALERF 523          
BLAST of NO12G02040 vs. NCBI_GenBank
Match: CDH58899.1 (u3 snornp-associated protein utp7 [Lichtheimia corymbifera JMRC:FSU:9682])

HSP 1 Score: 485.0 bits (1247), Expect = 3.300e-133
Identity = 241/450 (53.56%), Postives = 318/450 (70.67%), Query Frame = 0
Query:   50 PLERQLD-AKAKVLYEGELGANVV-SKLTDKRLKTKLKQSEKKFKEAALEAARSEMLLPQEAGYLESEGPMEQTWRLTQRDLKKHVDLQTASQIFSLDLPTLGPYTLDWALNGRHLLLGGRHGHVALIDAQRMNGTRELNLREPVRDVSFLHNEGMFAVAQKKYVYIYDNQGLELHCLRGHIDPMRLVFLPYHFLLASVGRAGWLKYQDVSTGQLVAEYGTKKGVCQAMRQNPHNGVVHLGHPNGVVSLWSPVMSQPLVSILCHRGPVTGIAVDREGRYMASAGMDGEVKLWDLRVYKQLHHYQFTSPPSSVDISQKGLLAVGFGSHVTVWKDALAQKVRSPYLRHDTPGNALDTVRFRPYEDVLGLGHKRGYVSMVVPGAGEPNFDTLEANPFQTRKQRREAEVHGLLDKLAPETIALNPTTVGAV--DLQPEVL-IREQRELMEQADR 495
            P E ++D A+ K   +   G  V   K+ DK+L+ KL++ E++ +EA+  AAR+E+LL +EAG+LE+EG +E+T+   Q  L K VD+ T+ +IF+LDLP  GPY +D+  NGRHLL+GG+ GH+A  D Q      E ++ E +RDV +LHNE + A AQK++V+IYD  GLE+H L+ H D  +L FLPYHFLLASVG AG+LKYQD STGQ V E  TK G C  M QNP N ++HLGH NG V+LWSP  SQP V +LCH+GPV  +AVD  GRYMA+AG+DG++K+WD+R Y+ L  Y    P +S+ ISQ+GLL VG+ SHVT+WKDA   K +SPY+ H  P + +  ++F PYEDVLG GH +G  S+VVPGAGEPNFDTLEANP+QT KQR+EAEVH LLDKL PE I L+PT +G V    + E+L  R + E+   A+R
Sbjct:   13 PQEHEIDIARKKAERKYNRGKPVAFDKVKDKKLRAKLQRQEEQIREASESAARAELLLQEEAGFLEAEG-VEKTYNYRQDQLSKEVDINTSKKIFTLDLPDHGPYCIDYTRNGRHLLMGGKRGHLAAFDWQTGRLHFETHVNELIRDVKWLHNETLLATAQKQHVFIYDQSGLEIHRLKHHQDVNKLEFLPYHFLLASVGNAGYLKYQDTSTGQFVTELRTKLGSCHTMAQNPWNAIIHLGHVNGTVTLWSPNSSQPHVKMLCHKGPVQSLAVDPTGRYMATAGLDGKLKIWDIRKYEPLQEYYSPRPATSLSISQRGLLGVGWTSHVTIWKDAFRTKQQSPYMNHLQPSSTIHDIQFVPYEDVLGFGHAKGVSSIVVPGAGEPNFDTLEANPYQTVKQRQEAEVHSLLDKLQPEMIVLDPTQIGRVTRTSKNEILKRRREEEIKNDAER 461          
BLAST of NO12G02040 vs. NCBI_GenBank
Match: ORX72633.1 (BING4CT-domain-containing protein [Linderina pennispora])

HSP 1 Score: 484.6 bits (1246), Expect = 4.300e-133
Identity = 223/427 (52.22%), Postives = 315/427 (73.77%), Query Frame = 0
Query:   74 KLTDKRLKTKLKQSEKKFKEAALEAARSEMLLPQEAGYLESEGPMEQTWRLTQRDLKKHVDLQTASQIFSLDLPTLGPYTLDWALNGRHLLLGGRHGHVALIDAQRMNGTRELNLREPVRDVSFLHNEGMFAVAQKKYVYIYDNQGLELHCLRGHIDPMRLVFLPYHFLLASVGRAGWLKYQDVSTGQLVAEYGTKKGVCQAMRQNPHNGVVHLGHPNGVVSLWSPVMSQPLVSILCHRGPVTGIAVDREGRYMASAGMDGEVKLWDLRVYKQLHHYQFTSPPSSVDISQKGLLAVGFGSHVTVWKDALAQKVRSPYLRHDTPGNALDTVRFRPYEDVLGLGHKRGYVSMVVPGAGEPNFDTLEANPFQTRKQRREAEVHGLLDKLAPETIALNPTTVGAVDLQPEVLIREQRELMEQADRRPAKPK 501
            ++  K+   K++  +++ ++A L+AAR+E+L+ +EAGYLE+EG ME+T+R+ QRDLK+H+D+ +A +IF LDL   GPY++D+  NG+ LLLGGR GH+A +D +  N T E ++RE +RDV++LHNE +FAVAQKKY YIYD+ G E+HCL+ H++P  L FLPYHFLLAS G  G + YQDV+ G +  E+ T  G C  ++ NP+N VV+LGH NG+VS+W+P  +QPL  ILCH+GPV  +A+DR G YMA++G DG +K+WD+R +KQLH Y+ T P  S+DISQ+GLLA G+G++VT+WKDALA KV+ PY++    G ++  V F PY+DVLG G  +G  S+V+PG+GEPNFD   ANPFQT+KQR+EAEV  LLDKLAP+TI L+P  +G +D  P   ++ QRE + +  +   + K
Sbjct:   33 QVKSKKAIHKVQHEQRRREQAILDAARAEVLMTEEAGYLEAEG-MERTYRIKQRDLKEHLDISSADKIFDLDLQEFGPYSMDYTRNGKFLLLGGRKGHLATMDWRNGNLTCEFHVRETIRDVAWLHNESLFAVAQKKYAYIYDHTGAEVHCLQKHVEPTALGFLPYHFLLASTGNTGKVVYQDVTEGSVAGEHRTGYGECHVLKVNPYNAVVNLGHSNGIVSMWAPKQAQPLAKILCHQGPVQAMAIDRTGTYMATSGQDGRLKIWDIRNFKQLHEYKTTRPAHSLDISQQGLLAAGYGANVTIWKDALADKVKKPYMQRTVGGTSISDVMFVPYDDVLGYGTDKGISSIVIPGSGEPNFDAYVANPFQTKKQRQEAEVKSLLDKLAPDTIQLDPNFIGRLD--PRTAVQRQREAVARQQQEYTENK 456          
BLAST of NO12G02040 vs. NCBI_GenBank
Match: PKK78121.1 (BING4CT-domain-containing protein [Rhizophagus irregularis])

HSP 1 Score: 484.2 bits (1245), Expect = 5.600e-133
Identity = 245/502 (48.80%), Postives = 337/502 (67.13%), Query Frame = 0
Query:   64 EGELGANVVSKLTDKRLKTKLKQSEKKFKEAALEAARSEMLLPQEAGYLESEGPMEQTWRLTQRDLKKHVDLQTASQIFSLDLPTLGPYTLDWALNGRHLLLGGRHGHVALIDAQRMNGTRELNLREPVRDVSFLHNEGMFAVAQKKYVYIYDNQGLELHCLRGHIDPMRLVFLPYHFLLASVGRAGWLKYQDVSTGQLVAEYGTKKGVCQAMRQNPHNGVVHLGHPNGVVSLWSPVMSQPLVSILCHRGPVTGIAVDREGRYMASAGMDGEVKLWDLRVYKQLHHYQFTSPPSSVDISQKGLLAVGFGSHVTVWKDALAQKVRSPYLRHDTPGNALDTVRFRPYEDVLGLGHKRGYVSMVVPGAGEPNFDTLEANPFQTRKQRREAEVHGLLDKLAPETIALNPTTVGAVDLQPEVLIREQRELMEQADRRPAKPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLKQKIDKAREEAKQKKETDTRNRQAEEAPRALQRF 566
            E ++ +  + K+ +K+LK  L + EK   EAA++AARSE+LL +E GYLE+EG +E+T+ +TQ+ L ++VD  +  +IF L LPT GPY+LD+  NGRHL++GGR GHV  ID        E++L+E VRDV +LHNE  +AVAQKKYV+IYD+ GLE+H L+ HI+  +L FLPYHFLL SVG AGWLKYQD STG+LVAE  TK G C A+ QNP N ++HLGH NG V+LWSP MS PLV +L H+GPV  +AVD  G+YMA++G+DG++KLWD+R YK L  Y   +P SS+ ISQ GLL VG+G HVT+WKDA   K +SPY+ H   G+ +  + F P++DVLGLGH  G  S+++PG+GEPN D+LEANP+Q++KQR+E+EVH LLDK+ PE I+L+ T +G VD   + L+  +R   ++A R   +                               L  Q+  K  +EA++K+     N   ++ P+AL+RF
Sbjct:   25 ERKISSRQLKKIKNKKLKGTLDRIEKVSNEAAIKAARSEILLTEEPGYLEAEG-IEKTFNITQKQLSENVDEDSTKKIFDLKLPTFGPYSLDYTRNGRHLVIGGRKGHVMSIDWMENKIKSEIHLKETVRDVKWLHNELFYAVAQKKYVFIYDHNGLEVHRLKKHIEVNKLDFLPYHFLLVSVGSAGWLKYQDTSTGKLVAELRTKLGGCDAIAQNPWNAIMHLGHYNGTVTLWSPNMSTPLVKMLTHKGPVKAVAVDHTGKYMATSGLDGQLKLWDIRTYKPLQQYYTRTPASSLSISQLGLLGVGWGPHVTIWKDAFLTKQQSPYMNHLQVGSQIQDIHFCPFDDVLGLGHSYGISSIIIPGSGEPNLDSLEANPYQSKKQRQESEVHSLLDKIQPEMISLDSTFIGKVDGASKDLLDMERNEEQKAQRANEEKWVPKNKARGKNSSLKRYLRKKQKNVIDERKLKIQQRIKQEKEARRKRIMG--NEDDKDRPKALERF 523          
The following BLAST results are available for this feature:
BLAST of NO12G02040 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
KFH72693.12.300e-13956.78hypothetical protein MVEG_02982 [Mortierella verti... [more]
OAQ29660.15.200e-13958.99BING4CT-domain-containing protein [Mortierella elo... [more]
XP_018290545.18.900e-13957.35hypothetical protein PHYBLDRAFT_181856 [Phycomyces... [more]
ORY97678.11.300e-13457.46WD40-repeat-containing domain protein [Syncephalas... [more]
PKY41105.13.900e-13449.20BING4CT-domain-containing protein [Rhizophagus irr... [more]
ODQ75850.15.100e-13453.99hypothetical protein LIPSTDRAFT_102600 [Lipomyces ... [more]
EXX59722.18.600e-13449.20Utp7p [Rhizophagus irregularis DAOM 197198w] >GBC1... [more]
CDH58899.13.300e-13353.56u3 snornp-associated protein utp7 [Lichtheimia cor... [more]
ORX72633.14.300e-13352.22BING4CT-domain-containing protein [Linderina penni... [more]
PKK78121.15.600e-13348.80BING4CT-domain-containing protein [Rhizophagus irr... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL126nonsL126Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL124nonsL124Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR014ncniR014Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR008ngnoR008Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR006ngnoR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010149NSK010149Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO12G02040.1NO12G02040.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|592263gene_5362Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100021g43gene4702Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO12G02040.1NO12G02040.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO12G02040 ID=NO12G02040|Name=NO12G02040|organism=Nannochloropsis oceanica|type=gene|length=1701bp
ATGTTCAAGGCCACAGAGGAAAGTGGCAATGGCCGTGTTGGTAGAGGCAG
CAACTCCGGCAACAACTATTTCATGGCTACTGGCAAGAGGACCTCAAAAA
CCGGGAACAAACGCATGCTTCCCAAGCCGCACAAGACGATCCTCACTCCC
TTGGAGCGGCAACTAGATGCGAAGGCGAAGGTCTTGTACGAGGGAGAGTT
GGGGGCCAACGTGGTTAGCAAGCTGACGGATAAGCGGCTTAAGACCAAGC
TGAAGCAGTCGGAAAAGAAATTCAAGGAAGCGGCATTGGAGGCGGCGCGT
TCCGAGATGCTCTTACCACAAGAAGCAGGGTACTTGGAGTCGGAAGGCCC
CATGGAGCAGACATGGAGACTTACACAACGTGACCTGAAGAAGCATGTAG
ACTTGCAGACGGCCAGTCAAATATTTTCTTTGGATCTGCCGACGCTGGGG
CCGTACACGCTAGACTGGGCGCTGAATGGCCGACACTTGCTCCTGGGGGG
GCGCCATGGCCACGTCGCGCTCATCGACGCTCAGCGGATGAACGGGACCC
GCGAATTAAACTTGCGGGAACCAGTGCGGGACGTTAGTTTTTTGCACAAT
GAAGGCATGTTTGCTGTGGCACAGAAGAAATACGTGTACATTTACGATAA
CCAAGGGCTGGAGCTACACTGCCTGCGGGGCCACATCGACCCGATGCGCC
TGGTGTTTTTGCCCTACCACTTTTTGCTCGCATCCGTCGGCCGGGCAGGC
TGGCTCAAATATCAAGACGTGTCTACCGGTCAGCTAGTGGCAGAGTATGG
CACGAAGAAGGGTGTGTGCCAGGCCATGCGACAGAACCCGCACAATGGCG
TGGTGCACCTGGGACACCCCAACGGGGTGGTGTCTTTGTGGAGTCCAGTC
ATGAGCCAGCCTCTGGTATCAATTCTTTGCCACCGCGGACCCGTCACAGG
CATTGCCGTTGATCGGGAGGGGAGGTACATGGCCTCGGCGGGGATGGACG
GGGAGGTGAAGTTGTGGGACCTGCGCGTGTACAAGCAGCTGCACCACTAC
CAGTTCACCTCACCCCCTTCCAGCGTGGACATCAGCCAGAAGGGTTTGCT
CGCCGTTGGATTTGGCTCCCACGTGACGGTCTGGAAGGACGCTCTTGCTC
AAAAGGTACGATCCCCTTACCTGCGGCATGACACCCCTGGCAATGCGCTG
GACACAGTGCGTTTCCGGCCCTACGAGGACGTGCTGGGCTTGGGTCACAA
GAGAGGGTATGTGTCGATGGTAGTGCCCGGGGCGGGAGAGCCCAACTTCG
ACACTTTGGAGGCCAATCCTTTCCAAACACGCAAGCAGCGACGTGAGGCG
GAGGTGCACGGTTTGCTGGACAAGCTGGCTCCGGAGACGATTGCATTGAA
CCCTACCACGGTGGGTGCTGTTGATCTGCAGCCGGAGGTTTTGATCCGGG
AGCAGCGGGAGCTCATGGAGCAGGCGGACAGACGGCCTGCCAAGCCTAAG
AAAGATAAGAACCGTATGCGTGGAAAGAGCAAGCTACGTAAAAAACTGAA
GCGCAAGCAGAAAAATGTCGTTGATGAGAAGACGGTGCTGCTGAAACAGA
AAATTGACAAGGCACGGGAGGAGGCTAAGCAAAAGAAGGAGACAGACACT
CGAAACCGACAGGCGGAGGAAGCTCCGCGCGCCCTTCAGCGCTTTTTTTG
A
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protein sequence of NO12G02040.1

>NO12G02040.1-protein ID=NO12G02040.1-protein|Name=NO12G02040.1|organism=Nannochloropsis oceanica|type=polypeptide|length=567bp
MFKATEESGNGRVGRGSNSGNNYFMATGKRTSKTGNKRMLPKPHKTILTP
LERQLDAKAKVLYEGELGANVVSKLTDKRLKTKLKQSEKKFKEAALEAAR
SEMLLPQEAGYLESEGPMEQTWRLTQRDLKKHVDLQTASQIFSLDLPTLG
PYTLDWALNGRHLLLGGRHGHVALIDAQRMNGTRELNLREPVRDVSFLHN
EGMFAVAQKKYVYIYDNQGLELHCLRGHIDPMRLVFLPYHFLLASVGRAG
WLKYQDVSTGQLVAEYGTKKGVCQAMRQNPHNGVVHLGHPNGVVSLWSPV
MSQPLVSILCHRGPVTGIAVDREGRYMASAGMDGEVKLWDLRVYKQLHHY
QFTSPPSSVDISQKGLLAVGFGSHVTVWKDALAQKVRSPYLRHDTPGNAL
DTVRFRPYEDVLGLGHKRGYVSMVVPGAGEPNFDTLEANPFQTRKQRREA
EVHGLLDKLAPETIALNPTTVGAVDLQPEVLIREQRELMEQADRRPAKPK
KDKNRMRGKSKLRKKLKRKQKNVVDEKTVLLKQKIDKAREEAKQKKETDT
RNRQAEEAPRALQRFF*
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Synonyms
Publications