NO12G02020, NO12G02020 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO12G02020 vs. NCBI_GenBank
Match: EWM25812.1 (hypothetical protein Naga_100021g45 [Nannochloropsis gaditana]) HSP 1 Score: 421.4 bits (1082), Expect = 5.900e-114 Identity = 304/768 (39.58%), Postives = 409/768 (53.26%), Query Frame = 0 Query: 1 MAPAHAVKQMPILKGVVAYCYVLNEDGSDVSGATEKEVKDLGGSTTRRLAASTHVFLSSNVVSASAVYNEALSQKKKIVTTQWIEVCKALGERISSTSFAPAAPVSPAIFLAK------NSSASRRQRNK--FETVNKEDATLPSPSAACFSSSEMKDPVAQQEASRRIRGGRRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETITPKQSISESNKKQRSLGRTLASAGRSKKLAAVVAAEAAYNFGDGEEYDDKMDEFEPNKAPQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAVFPAKQNSRGCKKTV---EIEKEGGKETGRKIKKRTLESGLVSAVCTGEWDCRRCTFYNRARAKQCEMCNFSRDGIFLELKSDRSGAK-KESAPSFPTSSPSNKKPRTGTNARARISSASSTSNISSRKKFIPVEKENTKRFNSKAFYSAVVSSTSTSPSISNGNNDHRKKETAMLSITSKEKRQKGEMKAKTQVEDGVVTLAFSGMDGDVRSALAAEMKQLGKKLAAKGGGVAPVA---KMVQTDDPSVLFTHLLVPADRECRRTLKVLFALCSGAHIVTADWLVESAAKNRWLPEENYTIQRFLRRPTEEERYVAARENVYFGPCETPSRRILGKLVVAAGGRLTTSLRDATLVVTQSGLAATEEWLVATLQKKGTGARLQKLLDEQLVVEPLFLFEGIDTGALAKDKDKYAIITPNMKKEVAGAEGRE 754 MAPA+ PILKGVVAYC+V EDG DVS A EK+VK+LGGSTTRR+AAS+HVFLSSNV A+Y EA + +K++VT++W+EVCKA+GER+S+ F P AP PA L K S+A RR+ NK +ET++ E A LPSPSA CFSSS+MKDP+ QQEASRRIRG RRSS +TP+QS E + ++ L + + Y +++D+ + + P N +G V +I+ E ET +KR +S + +C+ W C RCTF NRARAK C++C R+ ++L +S K + ++ SF + P +KK R +A+AR S S +S + + ++ N K S TS ++ + + R K E+ G + + + + LA SG+D DVRS LAAE ++L K +GG V ++ +M+ TDDPS FTHLLVP +RECRRTLK+LFALC+GAHIVTADWL +SA+K LPE Y I RF RR E R++A E VY GPCETPS RIL +L+VAAGG+ T SLRDATLV+ Q GLA +E+W+ TL++K TGA L+ LLD+ VVEP FL++GID GALAK++ +YAI ++ K GA GRE Sbjct: 1 MAPANVT---PILKGVVAYCHVFLEDGLDVSSAVEKQVKELGGSTTRRIAASSHVFLSSNV--DYAIYTEARASQKRLVTSEWLEVCKAIGERVSTVCFEPVAPSPPAFNLKKREKYTSTSAARRRRSNKTSYETLDNEHAKLPSPSAKCFSSSQMKDPLLQQEASRRIRGRRRSS-------------------------AAAKKLRYQRDLSPKIEQAETCSRLQRSINDSVGHELARNSHVTPQQSTGEDSMSHEFSAVDGSNDNCKTSLHSSIMVAKRY-------LAEELDQNDTSLVPMNEDGEKRYTQAQLGDPNDGANITLRAPRASGLTKGKVANPKGVAYKVNGRKIQPEEKVET----EKRKPDSAF-TTMCSDGWHCARCTFKNRARAKVCDVCLLQREEAPMDLNDAQSNGKARMTSTSF--ALPPHKKLRHDPSAQARRSRISHNDEKASMRPKL-IDATNRK-------------SEPTSSALPSSSFKVRHKGKV-------EELPLGTHQKQEDAPEPRMLLAVSGVDNDVRSTLAAEARKLEKNFLFEGGNVCGISLGPRMLHTDDPSATFTHLLVPKERECRRTLKILFALCTGAHIVTADWLSDSASKETLLPENRYIISRFQRRVNAESRHIATEELVYVGPCETPSHRILARLLVAAGGKQTMSLRDATLVLLQPGLAVSEKWIAETLKRKRTGAWLRALLDDYRVVEPRFLYDGIDAGALAKNRAEYAI---SVAKSNMGA-GRE 699
BLAST of NO12G02020 vs. NCBI_GenBank
Match: XP_024571703.1 (microcephalin-like isoform x1 [Plasmopara halstedii] >CEG35334.1 microcephalin-like isoform x1 [Plasmopara halstedii]) HSP 1 Score: 80.5 bits (197), Expect = 2.500e-11 Identity = 49/153 (32.03%), Postives = 79/153 (51.63%), Query Frame = 0 Query: 530 SGMDGDVRSALAAEMKQLGKKLAAKGGGVAPVAKMVQTDDPSVLFTHLLVPADRECRRTLKVLFALCSGAHIVTADWLVESAAKNRWLPEENYTIQRFLRRPTEEE---RYVAARENVYFGPCETPSRRILGKLVVAAGGRLTTSLRDATLVV 680 +G+ + R L + + +A + G A++V++ D + THL+V R+ RRT+KVLFA+ GA IVT DW+ S + RWLPEE+Y + F + + E R + + G PSR +L L+ AGG + + A + + Sbjct: 619 TGVSSETRGVLQCAIHAIDANMANEDG--YKKARVVKSVDYAAGVTHLIV--GRDARRTMKVLFAIARGAWIVTEDWVFSSLEQERWLPEEDYEVTIFANKYSREHPEFRQLFKATKFFVGSKVEPSREVLQSLIQVAGGEICNQISVADICI 767
BLAST of NO12G02020 vs. NCBI_GenBank
Match: OWY95694.1 (hypothetical protein PHMEG_00034236 [Phytophthora megakarya]) HSP 1 Score: 75.5 bits (184), Expect = 8.000e-10 Identity = 73/266 (27.44%), Postives = 117/266 (43.98%), Query Frame = 0 Query: 426 PSNKKPRTGTNARARISSASSTSNISSRKKFIPVEKENT------KRFNSKAFYSAVVSSTSTSPSISNGNNDHRKKETAMLSIT---SKEKRQKGEMKAKTQVEDGVVTLAFSGMDGDVRSALAAEMKQLGKKLAAKGGGVAPVAKMVQTDDPSVLFTHLLVPADRECRRTLKVLFALCSGAHIVTADWLVESAAKNRWLPEENYTIQRFLR---RPTEEERYVAARENVYFGPCETPSRRILGKLVVAAGGRLTTSLRDATLVV 680 P KP+ SSA + ++RK+ P +++ K+ + V +T S+S HR+ +A L + S +K KA V +G+ + R L + + +A + G A++V++ D + THL+V ++ RRT+KVLFA+ GA IVT DW S + RWLPEE++ + F R E R + + GP PSR +L LV AGG + + A + + Sbjct: 159 PPTTKPQRKFXXXXAPSSAMKLTQSAARKRARPPVSDSSLTTPVVKKARRDYMDNTVDKHMATPGSVSGFMRKHREVNSAPLPMAMSFSSTTSRKTPRKAPRNV------FGITGVSAEARGVLQCAIHAIDTNMANEAG--YRKARIVKSVDYAAGVTHLIV--GKDVRRTIKVLFAIARGAWIVTEDWAFSSLEQERWLPEEDFELTMFANKYSREHPESRQILKGMKFFVGPNLDPSREVLQSLVQVAGGEICNQISVADICI 414
BLAST of NO12G02020 vs. NCBI_GenBank
Match: XP_002902143.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY56815.1 conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 75.1 bits (183), Expect = 1.000e-9 Identity = 61/209 (29.19%), Postives = 94/209 (44.98%), Query Frame = 0 Query: 477 VSSTSTSPSISNGNNDHRKKETAMLSIT---SKEKRQKGEMKAKTQVEDGVVTLAFSGMDGDVRSALAAEMKQLGKKLAAKGGGVAPVAKMVQTDDPSVLFTHLLVPADRECRRTLKVLFALCSGAHIVTADWLVESAAKNRWLPEENYTIQRFLR---RPTEEERYVAARENVYFGPCETPSRRILGKLVVAAGGRLTTSLRDATLVV 680 V+ T S+S HR+ + + + S +K K+ V +G+ + R L + + +A + G A++V++ D + THL+V R+ RRT+KVLFA+ GA IVT DW S + RWLPEE + + F R E R V + G PSR +L L+ AGG L + A + + Sbjct: 604 VNKMVTPGSVSGFMRKHREVNSTPIPMAMSFSSTTSRKSPRKSPRNV------FGITGVSAEARGVLQCAIHAIDANMANEPG--YRKARVVKSMDYAAGVTHLIV--GRDARRTIKVLFAIARGAWIVTEDWAFSSLEQERWLPEEEFELTMFANKYSREHPESRQVFKGTKFFVGSNVEPSREVLQSLIQVAGGELCNQISVADICI 802
BLAST of NO12G02020 vs. NCBI_GenBank
Match: XP_002997144.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY69645.1 conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 73.6 bits (179), Expect = 3.000e-9 Identity = 60/209 (28.71%), Postives = 95/209 (45.45%), Query Frame = 0 Query: 477 VSSTSTSPSISNGNNDHRKKETAMLSIT---SKEKRQKGEMKAKTQVEDGVVTLAFSGMDGDVRSALAAEMKQLGKKLAAKGGGVAPVAKMVQTDDPSVLFTHLLVPADRECRRTLKVLFALCSGAHIVTADWLVESAAKNRWLPEENYTIQRFLR---RPTEEERYVAARENVYFGPCETPSRRILGKLVVAAGGRLTTSLRDATLVV 680 V+ T S+S HR+ + + + S +K K+ V +G+ + R L + + +A + G A+++++ D + THL+V R+ RRT+KVLFA+ GA IVT DW S + RWLPEE++ + F R E R V + G PSR +L L+ AGG L + A + + Sbjct: 604 VNKMVTPGSVSGFMRKHREVNSTPIPMAMSFSSTTSRKTPRKSPRNV------FGITGVSAEARGVLQCAIHAIDANMANEPG--YRKARVLKSMDYAAGVTHLIV--GRDARRTIKVLFAIARGAWIVTEDWAFSSLEQERWLPEEDFELTMFANKYSREHPESRQVFKGTKFFVGSNVEPSREVLQSLIQVAGGELCNQISVADICI 802
BLAST of NO12G02020 vs. NCBI_GenBank
Match: ETK96769.1 (hypothetical protein L915_00595 [Phytophthora parasitica]) HSP 1 Score: 72.4 bits (176), Expect = 6.700e-9 Identity = 73/263 (27.76%), Postives = 120/263 (45.63%), Query Frame = 0 Query: 423 TSSPSNKKPRTGTNARARISSASSTSNISSRKKFIPVEKENTKRFNSKAFYSAVVSSTSTSPSISNGNNDHRKKETAMLSIT---SKEKRQKGEMKAKTQVEDGVVTLAFSGMDGDVRSALAAEMKQLGKKLAAKGGGVAPVAKMVQTDDPSVLFTHLLVPADRECRRTLKVLFALCSGAHIVTADWLVESAAKNRWLPEENYTIQRF---LRRPTEEERYVAARENVYFGPCETPSRRILGKLVVAAGGRLTTSLRDATLVV 680 T +PS+ T + A+ R STS++++ PV K+ R ++K S V T S+S HR+ + + + S +K K V +G+ + R L + + +A + G A++V++ D + THL+V R+ +RT+KVLFA+ GA IVT DW S + RWLPEE++ + F R E R + + G PSR +L L+ AGG ++ + A + + Sbjct: 601 TKAPSSAMKLTQSAAKKRARPPVSTSSLTT-----PVVKK--ARRDNKG--STVDKQLVTPGSVSGFMRKHREVNSTPIPMAMSFSSTTSRKTPRKCPRNV------FGITGVSAEARGVLQCAIHAIDANMANESG--YRKARVVKSVDYAAGVTHLIV--GRDTKRTIKVLFAIARGAWIVTEDWAFSSLEQERWLPEEDFELTMFANKFSREHPESRQIFKGTKFFVGSTVEPSREVLQSLIQVAGGEISKQVSVADICI 844
BLAST of NO12G02020 vs. NCBI_GenBank
Match: ETL50118.1 (hypothetical protein L916_00599 [Phytophthora parasitica]) HSP 1 Score: 72.4 bits (176), Expect = 6.700e-9 Identity = 73/263 (27.76%), Postives = 120/263 (45.63%), Query Frame = 0 Query: 423 TSSPSNKKPRTGTNARARISSASSTSNISSRKKFIPVEKENTKRFNSKAFYSAVVSSTSTSPSISNGNNDHRKKETAMLSIT---SKEKRQKGEMKAKTQVEDGVVTLAFSGMDGDVRSALAAEMKQLGKKLAAKGGGVAPVAKMVQTDDPSVLFTHLLVPADRECRRTLKVLFALCSGAHIVTADWLVESAAKNRWLPEENYTIQRF---LRRPTEEERYVAARENVYFGPCETPSRRILGKLVVAAGGRLTTSLRDATLVV 680 T +PS+ T + A+ R STS++++ PV K+ R ++K S V T S+S HR+ + + + S +K K V +G+ + R L + + +A + G A++V++ D + THL+V R+ +RT+KVLFA+ GA IVT DW S + RWLPEE++ + F R E R + + G PSR +L L+ AGG ++ + A + + Sbjct: 601 TKAPSSAMKLTQSAAKKRARPPVSTSSLTT-----PVVKK--ARRDNKG--STVDKQLVTPGSVSGFMRKHREVNSTPIPMAMSFSSTTSRKTPRKCPRNV------FGITGVSAEARGVLQCAIHAIDANMANESG--YRKARVVKSVDYAAGVTHLIV--GRDTKRTIKVLFAIARGAWIVTEDWAFSSLEQERWLPEEDFELTMFANKFSREHPESRQIFKGTKFFVGSTVEPSREVLQSLIQVAGGEISKQVSVADICI 844
BLAST of NO12G02020 vs. NCBI_GenBank
Match: ETM03177.1 (hypothetical protein L917_00573 [Phytophthora parasitica]) HSP 1 Score: 72.4 bits (176), Expect = 6.700e-9 Identity = 73/263 (27.76%), Postives = 120/263 (45.63%), Query Frame = 0 Query: 423 TSSPSNKKPRTGTNARARISSASSTSNISSRKKFIPVEKENTKRFNSKAFYSAVVSSTSTSPSISNGNNDHRKKETAMLSIT---SKEKRQKGEMKAKTQVEDGVVTLAFSGMDGDVRSALAAEMKQLGKKLAAKGGGVAPVAKMVQTDDPSVLFTHLLVPADRECRRTLKVLFALCSGAHIVTADWLVESAAKNRWLPEENYTIQRF---LRRPTEEERYVAARENVYFGPCETPSRRILGKLVVAAGGRLTTSLRDATLVV 680 T +PS+ T + A+ R STS++++ PV K+ R ++K S V T S+S HR+ + + + S +K K V +G+ + R L + + +A + G A++V++ D + THL+V R+ +RT+KVLFA+ GA IVT DW S + RWLPEE++ + F R E R + + G PSR +L L+ AGG ++ + A + + Sbjct: 576 TKAPSSAMKLTQSAAKKRARPPVSTSSLTT-----PVVKK--ARRDNKG--STVDKQLVTPGSVSGFMRKHREVNSTPIPMAMSFSSTTSRKTPRKCPRNV------FGITGVSAEARGVLQCAIHAIDANMANESG--YRKARVVKSVDYAAGVTHLIV--GRDTKRTIKVLFAIARGAWIVTEDWAFSSLEQERWLPEEDFELTMFANKFSREHPESRQIFKGTKFFVGSTVEPSREVLQSLIQVAGGEISKQVSVADICI 819
BLAST of NO12G02020 vs. NCBI_GenBank
Match: ETM56443.1 (hypothetical protein L914_00593 [Phytophthora parasitica]) HSP 1 Score: 72.4 bits (176), Expect = 6.700e-9 Identity = 73/263 (27.76%), Postives = 120/263 (45.63%), Query Frame = 0 Query: 423 TSSPSNKKPRTGTNARARISSASSTSNISSRKKFIPVEKENTKRFNSKAFYSAVVSSTSTSPSISNGNNDHRKKETAMLSIT---SKEKRQKGEMKAKTQVEDGVVTLAFSGMDGDVRSALAAEMKQLGKKLAAKGGGVAPVAKMVQTDDPSVLFTHLLVPADRECRRTLKVLFALCSGAHIVTADWLVESAAKNRWLPEENYTIQRF---LRRPTEEERYVAARENVYFGPCETPSRRILGKLVVAAGGRLTTSLRDATLVV 680 T +PS+ T + A+ R STS++++ PV K+ R ++K S V T S+S HR+ + + + S +K K V +G+ + R L + + +A + G A++V++ D + THL+V R+ +RT+KVLFA+ GA IVT DW S + RWLPEE++ + F R E R + + G PSR +L L+ AGG ++ + A + + Sbjct: 601 TKAPSSAMKLTQSAAKKRARPPVSTSSLTT-----PVVKK--ARRDNKG--STVDKQLVTPGSVSGFMRKHREVNSTPIPMAMSFSSTTSRKTPRKCPRNV------FGITGVSAEARGVLQCAIHAIDANMANESG--YRKARVVKSVDYAAGVTHLIV--GRDTKRTIKVLFAIARGAWIVTEDWAFSSLEQERWLPEEDFELTMFANKFSREHPESRQIFKGTKFFVGSTVEPSREVLQSLIQVAGGEISKQVSVADICI 844
BLAST of NO12G02020 vs. NCBI_GenBank
Match: XP_008890172.1 (hypothetical protein PPTG_00528 [Phytophthora parasitica INRA-310] >ETN24073.1 hypothetical protein PPTG_00528 [Phytophthora parasitica INRA-310]) HSP 1 Score: 72.4 bits (176), Expect = 6.700e-9 Identity = 73/263 (27.76%), Postives = 120/263 (45.63%), Query Frame = 0 Query: 423 TSSPSNKKPRTGTNARARISSASSTSNISSRKKFIPVEKENTKRFNSKAFYSAVVSSTSTSPSISNGNNDHRKKETAMLSIT---SKEKRQKGEMKAKTQVEDGVVTLAFSGMDGDVRSALAAEMKQLGKKLAAKGGGVAPVAKMVQTDDPSVLFTHLLVPADRECRRTLKVLFALCSGAHIVTADWLVESAAKNRWLPEENYTIQRF---LRRPTEEERYVAARENVYFGPCETPSRRILGKLVVAAGGRLTTSLRDATLVV 680 T +PS+ T + A+ R STS++++ PV K+ R ++K S V T S+S HR+ + + + S +K K V +G+ + R L + + +A + G A++V++ D + THL+V R+ +RT+KVLFA+ GA IVT DW S + RWLPEE++ + F R E R + + G PSR +L L+ AGG ++ + A + + Sbjct: 575 TKAPSSAMKLTQSAAKKRARPPVSTSSLTT-----PVVKK--ARRDNKG--STVDKQLVTPGSVSGFMRKHREVNSTPIPMAMSFSSTTSRKTPRKCPRNV------FGITGVSAEARGVLQCAIHAIDANMANESG--YRKARVVKSVDYAAGVTHLIV--GRDTKRTIKVLFAIARGAWIVTEDWAFSSLEQERWLPEEDFELTMFANKFSREHPESRQIFKGTKFFVGSTVEPSREVLQSLIQVAGGEISKQVSVADICI 818 The following BLAST results are available for this feature:
BLAST of NO12G02020 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 15
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO12G02020 ID=NO12G02020|Name=NO12G02020|organism=Nannochloropsis oceanica|type=gene|length=2584bpback to top protein sequence of NO12G02020.1 >NO12G02020.1-protein ID=NO12G02020.1-protein|Name=NO12G02020.1|organism=Nannochloropsis oceanica|type=polypeptide|length=754bpback to top Synonyms
Publications
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