NO12G02020, NO12G02020 (gene) Nannochloropsis oceanica

Overview
NameNO12G02020
Unique NameNO12G02020
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2584
Alignment locationchr12:572645..575228 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr12genomechr12:572645..575228 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036443Znf_RanBP2_sf
IPR036420BRCT_dom_sf
IPR001876Znf_RanBP2
IPR001357BRCT_dom
Homology
BLAST of NO12G02020 vs. NCBI_GenBank
Match: EWM25812.1 (hypothetical protein Naga_100021g45 [Nannochloropsis gaditana])

HSP 1 Score: 421.4 bits (1082), Expect = 5.900e-114
Identity = 304/768 (39.58%), Postives = 409/768 (53.26%), Query Frame = 0
Query:    1 MAPAHAVKQMPILKGVVAYCYVLNEDGSDVSGATEKEVKDLGGSTTRRLAASTHVFLSSNVVSASAVYNEALSQKKKIVTTQWIEVCKALGERISSTSFAPAAPVSPAIFLAK------NSSASRRQRNK--FETVNKEDATLPSPSAACFSSSEMKDPVAQQEASRRIRGGRRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETITPKQSISESNKKQRSLGRTLASAGRSKKLAAVVAAEAAYNFGDGEEYDDKMDEFEPNKAPQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAVFPAKQNSRGCKKTV---EIEKEGGKETGRKIKKRTLESGLVSAVCTGEWDCRRCTFYNRARAKQCEMCNFSRDGIFLELKSDRSGAK-KESAPSFPTSSPSNKKPRTGTNARARISSASSTSNISSRKKFIPVEKENTKRFNSKAFYSAVVSSTSTSPSISNGNNDHRKKETAMLSITSKEKRQKGEMKAKTQVEDGVVTLAFSGMDGDVRSALAAEMKQLGKKLAAKGGGVAPVA---KMVQTDDPSVLFTHLLVPADRECRRTLKVLFALCSGAHIVTADWLVESAAKNRWLPEENYTIQRFLRRPTEEERYVAARENVYFGPCETPSRRILGKLVVAAGGRLTTSLRDATLVVTQSGLAATEEWLVATLQKKGTGARLQKLLDEQLVVEPLFLFEGIDTGALAKDKDKYAIITPNMKKEVAGAEGRE 754
            MAPA+     PILKGVVAYC+V  EDG DVS A EK+VK+LGGSTTRR+AAS+HVFLSSNV    A+Y EA + +K++VT++W+EVCKA+GER+S+  F P AP  PA  L K       S+A RR+ NK  +ET++ E A LPSPSA CFSSS+MKDP+ QQEASRRIRG RRSS                                                                   +TP+QS  E +          ++      L + +     Y         +++D+ + +  P                                       N +G    V   +I+ E   ET    +KR  +S   + +C+  W C RCTF NRARAK C++C   R+   ++L   +S  K + ++ SF  + P +KK R   +A+AR S  S     +S +  + ++  N K             S  TS ++ + +   R K          E+   G  + +    +  + LA SG+D DVRS LAAE ++L K    +GG V  ++   +M+ TDDPS  FTHLLVP +RECRRTLK+LFALC+GAHIVTADWL +SA+K   LPE  Y I RF RR   E R++A  E VY GPCETPS RIL +L+VAAGG+ T SLRDATLV+ Q GLA +E+W+  TL++K TGA L+ LLD+  VVEP FL++GID GALAK++ +YAI   ++ K   GA GRE
Sbjct:    1 MAPANVT---PILKGVVAYCHVFLEDGLDVSSAVEKQVKELGGSTTRRIAASSHVFLSSNV--DYAIYTEARASQKRLVTSEWLEVCKAIGERVSTVCFEPVAPSPPAFNLKKREKYTSTSAARRRRSNKTSYETLDNEHAKLPSPSAKCFSSSQMKDPLLQQEASRRIRGRRRSS-------------------------AAAKKLRYQRDLSPKIEQAETCSRLQRSINDSVGHELARNSHVTPQQSTGEDSMSHEFSAVDGSNDNCKTSLHSSIMVAKRY-------LAEELDQNDTSLVPMNEDGEKRYTQAQLGDPNDGANITLRAPRASGLTKGKVANPKGVAYKVNGRKIQPEEKVET----EKRKPDSAF-TTMCSDGWHCARCTFKNRARAKVCDVCLLQREEAPMDLNDAQSNGKARMTSTSF--ALPPHKKLRHDPSAQARRSRISHNDEKASMRPKL-IDATNRK-------------SEPTSSALPSSSFKVRHKGKV-------EELPLGTHQKQEDAPEPRMLLAVSGVDNDVRSTLAAEARKLEKNFLFEGGNVCGISLGPRMLHTDDPSATFTHLLVPKERECRRTLKILFALCTGAHIVTADWLSDSASKETLLPENRYIISRFQRRVNAESRHIATEELVYVGPCETPSHRILARLLVAAGGKQTMSLRDATLVLLQPGLAVSEKWIAETLKRKRTGAWLRALLDDYRVVEPRFLYDGIDAGALAKNRAEYAI---SVAKSNMGA-GRE 699          
BLAST of NO12G02020 vs. NCBI_GenBank
Match: XP_024571703.1 (microcephalin-like isoform x1 [Plasmopara halstedii] >CEG35334.1 microcephalin-like isoform x1 [Plasmopara halstedii])

HSP 1 Score: 80.5 bits (197), Expect = 2.500e-11
Identity = 49/153 (32.03%), Postives = 79/153 (51.63%), Query Frame = 0
Query:  530 SGMDGDVRSALAAEMKQLGKKLAAKGGGVAPVAKMVQTDDPSVLFTHLLVPADRECRRTLKVLFALCSGAHIVTADWLVESAAKNRWLPEENYTIQRFLRRPTEEE---RYVAARENVYFGPCETPSRRILGKLVVAAGGRLTTSLRDATLVV 680
            +G+  + R  L   +  +   +A + G     A++V++ D +   THL+V   R+ RRT+KVLFA+  GA IVT DW+  S  + RWLPEE+Y +  F  + + E    R +      + G    PSR +L  L+  AGG +   +  A + +
Sbjct:  619 TGVSSETRGVLQCAIHAIDANMANEDG--YKKARVVKSVDYAAGVTHLIV--GRDARRTMKVLFAIARGAWIVTEDWVFSSLEQERWLPEEDYEVTIFANKYSREHPEFRQLFKATKFFVGSKVEPSREVLQSLIQVAGGEICNQISVADICI 767          
BLAST of NO12G02020 vs. NCBI_GenBank
Match: OWY95694.1 (hypothetical protein PHMEG_00034236 [Phytophthora megakarya])

HSP 1 Score: 75.5 bits (184), Expect = 8.000e-10
Identity = 73/266 (27.44%), Postives = 117/266 (43.98%), Query Frame = 0
Query:  426 PSNKKPRTGTNARARISSASSTSNISSRKKFIPVEKENT------KRFNSKAFYSAVVSSTSTSPSISNGNNDHRKKETAMLSIT---SKEKRQKGEMKAKTQVEDGVVTLAFSGMDGDVRSALAAEMKQLGKKLAAKGGGVAPVAKMVQTDDPSVLFTHLLVPADRECRRTLKVLFALCSGAHIVTADWLVESAAKNRWLPEENYTIQRFLR---RPTEEERYVAARENVYFGPCETPSRRILGKLVVAAGGRLTTSLRDATLVV 680
            P   KP+         SSA   +  ++RK+  P   +++      K+       + V    +T  S+S     HR+  +A L +    S    +K   KA   V         +G+  + R  L   +  +   +A + G     A++V++ D +   THL+V   ++ RRT+KVLFA+  GA IVT DW   S  + RWLPEE++ +  F     R   E R +      + GP   PSR +L  LV  AGG +   +  A + +
Sbjct:  159 PPTTKPQRKFXXXXAPSSAMKLTQSAARKRARPPVSDSSLTTPVVKKARRDYMDNTVDKHMATPGSVSGFMRKHREVNSAPLPMAMSFSSTTSRKTPRKAPRNV------FGITGVSAEARGVLQCAIHAIDTNMANEAG--YRKARIVKSVDYAAGVTHLIV--GKDVRRTIKVLFAIARGAWIVTEDWAFSSLEQERWLPEEDFELTMFANKYSREHPESRQILKGMKFFVGPNLDPSREVLQSLVQVAGGEICNQISVADICI 414          
BLAST of NO12G02020 vs. NCBI_GenBank
Match: XP_002902143.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY56815.1 conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 75.1 bits (183), Expect = 1.000e-9
Identity = 61/209 (29.19%), Postives = 94/209 (44.98%), Query Frame = 0
Query:  477 VSSTSTSPSISNGNNDHRKKETAMLSIT---SKEKRQKGEMKAKTQVEDGVVTLAFSGMDGDVRSALAAEMKQLGKKLAAKGGGVAPVAKMVQTDDPSVLFTHLLVPADRECRRTLKVLFALCSGAHIVTADWLVESAAKNRWLPEENYTIQRFLR---RPTEEERYVAARENVYFGPCETPSRRILGKLVVAAGGRLTTSLRDATLVV 680
            V+   T  S+S     HR+  +  + +    S    +K   K+   V         +G+  + R  L   +  +   +A + G     A++V++ D +   THL+V   R+ RRT+KVLFA+  GA IVT DW   S  + RWLPEE + +  F     R   E R V      + G    PSR +L  L+  AGG L   +  A + +
Sbjct:  604 VNKMVTPGSVSGFMRKHREVNSTPIPMAMSFSSTTSRKSPRKSPRNV------FGITGVSAEARGVLQCAIHAIDANMANEPG--YRKARVVKSMDYAAGVTHLIV--GRDARRTIKVLFAIARGAWIVTEDWAFSSLEQERWLPEEEFELTMFANKYSREHPESRQVFKGTKFFVGSNVEPSREVLQSLIQVAGGELCNQISVADICI 802          
BLAST of NO12G02020 vs. NCBI_GenBank
Match: XP_002997144.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY69645.1 conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 73.6 bits (179), Expect = 3.000e-9
Identity = 60/209 (28.71%), Postives = 95/209 (45.45%), Query Frame = 0
Query:  477 VSSTSTSPSISNGNNDHRKKETAMLSIT---SKEKRQKGEMKAKTQVEDGVVTLAFSGMDGDVRSALAAEMKQLGKKLAAKGGGVAPVAKMVQTDDPSVLFTHLLVPADRECRRTLKVLFALCSGAHIVTADWLVESAAKNRWLPEENYTIQRFLR---RPTEEERYVAARENVYFGPCETPSRRILGKLVVAAGGRLTTSLRDATLVV 680
            V+   T  S+S     HR+  +  + +    S    +K   K+   V         +G+  + R  L   +  +   +A + G     A+++++ D +   THL+V   R+ RRT+KVLFA+  GA IVT DW   S  + RWLPEE++ +  F     R   E R V      + G    PSR +L  L+  AGG L   +  A + +
Sbjct:  604 VNKMVTPGSVSGFMRKHREVNSTPIPMAMSFSSTTSRKTPRKSPRNV------FGITGVSAEARGVLQCAIHAIDANMANEPG--YRKARVLKSMDYAAGVTHLIV--GRDARRTIKVLFAIARGAWIVTEDWAFSSLEQERWLPEEDFELTMFANKYSREHPESRQVFKGTKFFVGSNVEPSREVLQSLIQVAGGELCNQISVADICI 802          
BLAST of NO12G02020 vs. NCBI_GenBank
Match: ETK96769.1 (hypothetical protein L915_00595 [Phytophthora parasitica])

HSP 1 Score: 72.4 bits (176), Expect = 6.700e-9
Identity = 73/263 (27.76%), Postives = 120/263 (45.63%), Query Frame = 0
Query:  423 TSSPSNKKPRTGTNARARISSASSTSNISSRKKFIPVEKENTKRFNSKAFYSAVVSSTSTSPSISNGNNDHRKKETAMLSIT---SKEKRQKGEMKAKTQVEDGVVTLAFSGMDGDVRSALAAEMKQLGKKLAAKGGGVAPVAKMVQTDDPSVLFTHLLVPADRECRRTLKVLFALCSGAHIVTADWLVESAAKNRWLPEENYTIQRF---LRRPTEEERYVAARENVYFGPCETPSRRILGKLVVAAGGRLTTSLRDATLVV 680
            T +PS+    T + A+ R     STS++++     PV K+   R ++K   S V     T  S+S     HR+  +  + +    S    +K   K    V         +G+  + R  L   +  +   +A + G     A++V++ D +   THL+V   R+ +RT+KVLFA+  GA IVT DW   S  + RWLPEE++ +  F     R   E R +      + G    PSR +L  L+  AGG ++  +  A + +
Sbjct:  601 TKAPSSAMKLTQSAAKKRARPPVSTSSLTT-----PVVKK--ARRDNKG--STVDKQLVTPGSVSGFMRKHREVNSTPIPMAMSFSSTTSRKTPRKCPRNV------FGITGVSAEARGVLQCAIHAIDANMANESG--YRKARVVKSVDYAAGVTHLIV--GRDTKRTIKVLFAIARGAWIVTEDWAFSSLEQERWLPEEDFELTMFANKFSREHPESRQIFKGTKFFVGSTVEPSREVLQSLIQVAGGEISKQVSVADICI 844          
BLAST of NO12G02020 vs. NCBI_GenBank
Match: ETL50118.1 (hypothetical protein L916_00599 [Phytophthora parasitica])

HSP 1 Score: 72.4 bits (176), Expect = 6.700e-9
Identity = 73/263 (27.76%), Postives = 120/263 (45.63%), Query Frame = 0
Query:  423 TSSPSNKKPRTGTNARARISSASSTSNISSRKKFIPVEKENTKRFNSKAFYSAVVSSTSTSPSISNGNNDHRKKETAMLSIT---SKEKRQKGEMKAKTQVEDGVVTLAFSGMDGDVRSALAAEMKQLGKKLAAKGGGVAPVAKMVQTDDPSVLFTHLLVPADRECRRTLKVLFALCSGAHIVTADWLVESAAKNRWLPEENYTIQRF---LRRPTEEERYVAARENVYFGPCETPSRRILGKLVVAAGGRLTTSLRDATLVV 680
            T +PS+    T + A+ R     STS++++     PV K+   R ++K   S V     T  S+S     HR+  +  + +    S    +K   K    V         +G+  + R  L   +  +   +A + G     A++V++ D +   THL+V   R+ +RT+KVLFA+  GA IVT DW   S  + RWLPEE++ +  F     R   E R +      + G    PSR +L  L+  AGG ++  +  A + +
Sbjct:  601 TKAPSSAMKLTQSAAKKRARPPVSTSSLTT-----PVVKK--ARRDNKG--STVDKQLVTPGSVSGFMRKHREVNSTPIPMAMSFSSTTSRKTPRKCPRNV------FGITGVSAEARGVLQCAIHAIDANMANESG--YRKARVVKSVDYAAGVTHLIV--GRDTKRTIKVLFAIARGAWIVTEDWAFSSLEQERWLPEEDFELTMFANKFSREHPESRQIFKGTKFFVGSTVEPSREVLQSLIQVAGGEISKQVSVADICI 844          
BLAST of NO12G02020 vs. NCBI_GenBank
Match: ETM03177.1 (hypothetical protein L917_00573 [Phytophthora parasitica])

HSP 1 Score: 72.4 bits (176), Expect = 6.700e-9
Identity = 73/263 (27.76%), Postives = 120/263 (45.63%), Query Frame = 0
Query:  423 TSSPSNKKPRTGTNARARISSASSTSNISSRKKFIPVEKENTKRFNSKAFYSAVVSSTSTSPSISNGNNDHRKKETAMLSIT---SKEKRQKGEMKAKTQVEDGVVTLAFSGMDGDVRSALAAEMKQLGKKLAAKGGGVAPVAKMVQTDDPSVLFTHLLVPADRECRRTLKVLFALCSGAHIVTADWLVESAAKNRWLPEENYTIQRF---LRRPTEEERYVAARENVYFGPCETPSRRILGKLVVAAGGRLTTSLRDATLVV 680
            T +PS+    T + A+ R     STS++++     PV K+   R ++K   S V     T  S+S     HR+  +  + +    S    +K   K    V         +G+  + R  L   +  +   +A + G     A++V++ D +   THL+V   R+ +RT+KVLFA+  GA IVT DW   S  + RWLPEE++ +  F     R   E R +      + G    PSR +L  L+  AGG ++  +  A + +
Sbjct:  576 TKAPSSAMKLTQSAAKKRARPPVSTSSLTT-----PVVKK--ARRDNKG--STVDKQLVTPGSVSGFMRKHREVNSTPIPMAMSFSSTTSRKTPRKCPRNV------FGITGVSAEARGVLQCAIHAIDANMANESG--YRKARVVKSVDYAAGVTHLIV--GRDTKRTIKVLFAIARGAWIVTEDWAFSSLEQERWLPEEDFELTMFANKFSREHPESRQIFKGTKFFVGSTVEPSREVLQSLIQVAGGEISKQVSVADICI 819          
BLAST of NO12G02020 vs. NCBI_GenBank
Match: ETM56443.1 (hypothetical protein L914_00593 [Phytophthora parasitica])

HSP 1 Score: 72.4 bits (176), Expect = 6.700e-9
Identity = 73/263 (27.76%), Postives = 120/263 (45.63%), Query Frame = 0
Query:  423 TSSPSNKKPRTGTNARARISSASSTSNISSRKKFIPVEKENTKRFNSKAFYSAVVSSTSTSPSISNGNNDHRKKETAMLSIT---SKEKRQKGEMKAKTQVEDGVVTLAFSGMDGDVRSALAAEMKQLGKKLAAKGGGVAPVAKMVQTDDPSVLFTHLLVPADRECRRTLKVLFALCSGAHIVTADWLVESAAKNRWLPEENYTIQRF---LRRPTEEERYVAARENVYFGPCETPSRRILGKLVVAAGGRLTTSLRDATLVV 680
            T +PS+    T + A+ R     STS++++     PV K+   R ++K   S V     T  S+S     HR+  +  + +    S    +K   K    V         +G+  + R  L   +  +   +A + G     A++V++ D +   THL+V   R+ +RT+KVLFA+  GA IVT DW   S  + RWLPEE++ +  F     R   E R +      + G    PSR +L  L+  AGG ++  +  A + +
Sbjct:  601 TKAPSSAMKLTQSAAKKRARPPVSTSSLTT-----PVVKK--ARRDNKG--STVDKQLVTPGSVSGFMRKHREVNSTPIPMAMSFSSTTSRKTPRKCPRNV------FGITGVSAEARGVLQCAIHAIDANMANESG--YRKARVVKSVDYAAGVTHLIV--GRDTKRTIKVLFAIARGAWIVTEDWAFSSLEQERWLPEEDFELTMFANKFSREHPESRQIFKGTKFFVGSTVEPSREVLQSLIQVAGGEISKQVSVADICI 844          
BLAST of NO12G02020 vs. NCBI_GenBank
Match: XP_008890172.1 (hypothetical protein PPTG_00528 [Phytophthora parasitica INRA-310] >ETN24073.1 hypothetical protein PPTG_00528 [Phytophthora parasitica INRA-310])

HSP 1 Score: 72.4 bits (176), Expect = 6.700e-9
Identity = 73/263 (27.76%), Postives = 120/263 (45.63%), Query Frame = 0
Query:  423 TSSPSNKKPRTGTNARARISSASSTSNISSRKKFIPVEKENTKRFNSKAFYSAVVSSTSTSPSISNGNNDHRKKETAMLSIT---SKEKRQKGEMKAKTQVEDGVVTLAFSGMDGDVRSALAAEMKQLGKKLAAKGGGVAPVAKMVQTDDPSVLFTHLLVPADRECRRTLKVLFALCSGAHIVTADWLVESAAKNRWLPEENYTIQRF---LRRPTEEERYVAARENVYFGPCETPSRRILGKLVVAAGGRLTTSLRDATLVV 680
            T +PS+    T + A+ R     STS++++     PV K+   R ++K   S V     T  S+S     HR+  +  + +    S    +K   K    V         +G+  + R  L   +  +   +A + G     A++V++ D +   THL+V   R+ +RT+KVLFA+  GA IVT DW   S  + RWLPEE++ +  F     R   E R +      + G    PSR +L  L+  AGG ++  +  A + +
Sbjct:  575 TKAPSSAMKLTQSAAKKRARPPVSTSSLTT-----PVVKK--ARRDNKG--STVDKQLVTPGSVSGFMRKHREVNSTPIPMAMSFSSTTSRKTPRKCPRNV------FGITGVSAEARGVLQCAIHAIDANMANESG--YRKARVVKSVDYAAGVTHLIV--GRDTKRTIKVLFAIARGAWIVTEDWAFSSLEQERWLPEEDFELTMFANKFSREHPESRQIFKGTKFFVGSTVEPSREVLQSLIQVAGGEISKQVSVADICI 818          
The following BLAST results are available for this feature:
BLAST of NO12G02020 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 15
Match NameE-valueIdentityDescription
EWM25812.15.900e-11439.58hypothetical protein Naga_100021g45 [Nannochlorops... [more]
XP_024571703.12.500e-1132.03microcephalin-like isoform x1 [Plasmopara halstedi... [more]
OWY95694.18.000e-1027.44hypothetical protein PHMEG_00034236 [Phytophthora ... [more]
XP_002902143.11.000e-929.19conserved hypothetical protein [Phytophthora infes... [more]
XP_002997144.13.000e-928.71conserved hypothetical protein [Phytophthora infes... [more]
ETK96769.16.700e-927.76hypothetical protein L915_00595 [Phytophthora para... [more]
ETL50118.16.700e-927.76hypothetical protein L916_00599 [Phytophthora para... [more]
ETM03177.16.700e-927.76hypothetical protein L917_00573 [Phytophthora para... [more]
ETM56443.16.700e-927.76hypothetical protein L914_00593 [Phytophthora para... [more]
XP_008890172.16.700e-927.76hypothetical protein PPTG_00528 [Phytophthora para... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL126nonsL126Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL124nonsL124Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR014ncniR014Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR008ngnoR008Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR006ngnoR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010151NSK010151Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO12G02020.1NO12G02020.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|631002gene_5360Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100021g45gene4704Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO12G02020.1NO12G02020.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO12G02020 ID=NO12G02020|Name=NO12G02020|organism=Nannochloropsis oceanica|type=gene|length=2584bp
ATGGCCCCGGCACACGCCGTCAAGCAGATGCCGATTCTTAAGGGCGTAGT
GGCGTATTGCTATGTCTTGAATGAGGACGGCTCGGACGTGAGTGGAGCGA
CAGAGAAGGAAGTCAAGGACCTGGGTGGCAGCACCACCAGGCGGTTGGCT
GCAAGCACCCATGTTTTCCTTTCTTCCAACGTGGTCTCCGCGTCGGCGGT
TTACAACGAGGCCCTCTCGCAGAAGAAGAAAATTGTCACGACGCAATGGA
TCGAGGTGTGCAAGGCACTGGGTGAGCGCATCTCCTCGACAAGCTTTGCT
CCGGCAGCCCCCGTTTCACCCGCCATCTTCCTGGCGAAGAACAGCTCCGC
ATCCCGCCGTCAGCGCAACAAGTTCGAGACCGTGAACAAGGAGGACGCAA
CTCTGCCATCACCTTCCGCCGCCTGgtaagtcgtgaccaccgtttccatc
ccttgttccaattctgttgcggtccacccatgcatcctctgtactaatcg
ccactcttgctccttttccttttcctcctcctcctgctgctgctgctgct
gttcctcctcctcctccccctcctccccttcctcctcctcctcctcctcc
tccaccaccaccacctccttctccatctctcccttgtgccacctattctc
ccctaatagCTTCAGCTCTTCTGAAATGAAAGATCCAGTTGCCCAACAGG
AAGCTAGTCGTCGGATTCGGGGGGGGCGTCGCTCATCCGCCGCTGCCAAA
AAATTGAAGCTTGCCCTCCCCGCACCTGTTGATGAAGTTGACGAGGAGGA
AGAAGAAAAAAAAGGAAATGAGGAAAAGGAGGTTGAGGGGGAGTTGGAGG
GGGAGTTGGAGTTGGGGGAGGAAAAGGAGGAGGAAGAGGAAGAGGGGGGA
GGGGTATGGGAAGACGATGGTGAGGATGAGGTGGAAACTATCACGCCGAA
ACAATCAATAAGCGAGAGCAACAAGAAGCAACGCTCTTTGGGCCGTACTC
TAGCCAGCGCCGGGCGCAGCAAGAAACTGGCGGCCGTAGTGGCGGCGGAG
GCCGCGTATAACTTTGGAGATGGCGAGGAGTATGACGACAAAATGGATGA
GTTCGAGCCAAATAAGGCGCCGCAGGAGGAGGAGGAGGAAGTTGAGCAGG
ACTGGATGGCGCGAGGCGAGAACGACAATGACAGTGGTAACAGTGCTGTA
TCCGCCTCGGCTGCGACTGCTGTTTTTCCAGCTAAGCAGAACTCAAGAGG
GTGCAAGAAGACGGTGGAAATCGAGAAAGAGGGAGGCAAGGAGACGGGGC
GGAAGATTAAAAAGCGGACGCTGGAGTCAGGACTGGTTAGCGCGGTCTGC
ACGGGGGAATGGGATTGCCGCCGCTGCACATTTTACAATCGTGCCCGGGC
CAAGCAGTGCGAGATGTGCAATTTTTCGCGGGATGGCATTTTTTTGGAGC
TGAAAAGTGACAGATCGGGTGCGAAGAAAGAGTCAGCGCCGTCCTTCCCC
ACTTCCTCTCCGTCGAATAAAAAGCCGCGCACGGGAACTAATGCCCGCGC
CAGGATAAGCAGCGCCAGCAGCACCAGCAACATCAGCAGTCGAAAAAAGT
TTATCCCCGTCGAGAAGGAGAACACCAAGCGGTTCAACAGCAAGGCTTTT
TACTCTGCCGTGGTTTCCTCCACGTCAACCTCCCCTTCCATCAGCAATGG
AAATAATGATCACAGGAAGAAAGAGACGGCTATGCTTTCAATAACTTCGA
AGGAAAAGAGGCAGAAAGGGGAGATGAAGGCCAAAACCCAGGTGGAAGAT
GGTGTCGTCACCCTTGCCTTCTCGGGGATGGACGGAGACGTGCGTTCCGC
ACTGGCAGCGGAGATGAAACAGTTAGGGAAGAAGCTGGCGGCAAAGGGTG
GAGGTGTTGCACCGGTGGCCAAGATGGTGCAGACGGATGATCCCTCCGTC
CTGTTTACGCATTTGCTGGTCCCTGCTGATCGAGAGTGTCGGCGCACGCT
GAAGGTCCTCTTTGCTCTTTGTTCGGGCGCCCACATTGTGACTGCTGACT
GGCTGGTGGAGAGTGCCGCCAAGAACCGCTGGCTACCTGAGGAAAACTAT
ACCATCCAGCGTTTCTTGCGTCGGCCAACTGAGGAGGAGCGCTACGTCGC
CGCAAGGGAGAATGTATACTTTGGGCCTTGTGAGACGCCGTCTCGTCGCA
TTCTTGGAAAACTGGTGGTGGCGGCTGGAGGACGTCTCACCACGTCGCTG
CGGGACGCCACTCTTGTTGTGACTCAGTCGGGGTTGGCAGCGACGGAGGA
ATGGCTTGTTGCGACATTGCAGAAGAAGGGGACGGGTGCGCGCTTGCAAA
AGCTGTTGGACGAGCAGCTTGTTGTCGAGCCGCTGTTTTTGTTTGAAGGC
ATCGATACAGGGGCGTTGGCCAAAGACAAGgtacgtgccaacccgtaacc
tctcgttctgcgtccagtttcgaagaaatcgactgatcaactttcctgta
cgtatctttcctatccagGACAAATATGCTATCATTACTCCGAACATGAA
GAAAGAAGTCGCCGGGGCTGAAGGCAGAGAATAG
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protein sequence of NO12G02020.1

>NO12G02020.1-protein ID=NO12G02020.1-protein|Name=NO12G02020.1|organism=Nannochloropsis oceanica|type=polypeptide|length=754bp
MAPAHAVKQMPILKGVVAYCYVLNEDGSDVSGATEKEVKDLGGSTTRRLA
ASTHVFLSSNVVSASAVYNEALSQKKKIVTTQWIEVCKALGERISSTSFA
PAAPVSPAIFLAKNSSASRRQRNKFETVNKEDATLPSPSAACFSSSEMKD
PVAQQEASRRIRGGRRSSAAAKKLKLALPAPVDEVDEEEEEKKGNEEKEV
EGELEGELELGEEKEEEEEEGGGVWEDDGEDEVETITPKQSISESNKKQR
SLGRTLASAGRSKKLAAVVAAEAAYNFGDGEEYDDKMDEFEPNKAPQEEE
EEVEQDWMARGENDNDSGNSAVSASAATAVFPAKQNSRGCKKTVEIEKEG
GKETGRKIKKRTLESGLVSAVCTGEWDCRRCTFYNRARAKQCEMCNFSRD
GIFLELKSDRSGAKKESAPSFPTSSPSNKKPRTGTNARARISSASSTSNI
SSRKKFIPVEKENTKRFNSKAFYSAVVSSTSTSPSISNGNNDHRKKETAM
LSITSKEKRQKGEMKAKTQVEDGVVTLAFSGMDGDVRSALAAEMKQLGKK
LAAKGGGVAPVAKMVQTDDPSVLFTHLLVPADRECRRTLKVLFALCSGAH
IVTADWLVESAAKNRWLPEENYTIQRFLRRPTEEERYVAARENVYFGPCE
TPSRRILGKLVVAAGGRLTTSLRDATLVVTQSGLAATEEWLVATLQKKGT
GARLQKLLDEQLVVEPLFLFEGIDTGALAKDKDKYAIITPNMKKEVAGAE
GRE*
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Synonyms
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