NO12G01970, NO12G01970 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO12G01970 vs. NCBI_GenBank
Match: EWM25802.1 (hypothetical protein Naga_100021g51 [Nannochloropsis gaditana]) HSP 1 Score: 199.9 bits (507), Expect = 1.300e-47 Identity = 112/216 (51.85%), Postives = 147/216 (68.06%), Query Frame = 0 Query: 123 LAVVLLRKSRVGKGRLVELLAATVGGLLSSSCCAVQLVLNSISVGCAGFAVLDRFRPLFLFLTFSSLAYKTVTYDIQLHKKPLRSLPTWLVAVALASAPVLVRRLNRG----ELSMGSFNLASSLHGTTPRPVMLRYRVRGMKCEACANGLKNALEAM-GDLRADVIFEQGMVFLVADVATATEHRDGMTEGETAAASVLQTLEQGVADVMHDRGY 334 L +L RK R+ K RL+ELLAA+ GGLLSSSCCAVQ++LN+ S+GCAGFA LD RP F+ LTFS+L YKT+ YD++ +K+ RS P+WLVAV L P ++R+LNRG EL+M S +L +P V+L+Y+V GMKCEACANGLK AL+A+ D+RA V +E+G+VFL+ M +G + LEQGVA VM +RGY Sbjct: 121 LLFLLCRKGRIRKARLLELLAASAGGLLSSSCCAVQVLLNTFSIGCAGFAALDHLRPFFISLTFSTLIYKTIVYDLRTYKQLWRSSPSWLVAVILTMFPTIMRKLNRGMGLRELTMLSGSLPCENKAASP-TVILQYKVEGMKCEACANGLKLALQALQSDVRARVFYEKGIVFLIR-----------MQKGADPDVETARDLEQGVAQVMKERGY 324
BLAST of NO12G01970 vs. NCBI_GenBank
Match: XP_005643012.1 (hypothetical protein COCSUDRAFT_34498 [Coccomyxa subellipsoidea C-169] >EIE18468.1 hypothetical protein COCSUDRAFT_34498 [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 97.1 bits (240), Expect = 1.100e-16 Identity = 70/154 (45.45%), Postives = 87/154 (56.49%), Query Frame = 0 Query: 146 VGGLLSSSCCAVQLVLNSISVGCAGFAVLDRFRPLFLFLTFSSLAYKTVTYDIQLHKKPLRSLPTWLVAVALASAPVLVRRLNRGELS-MGSFNLASSL----HGTTPRPVMLRYRVRGMKCEACANGLKNALEAM--GDLRADVIFEQGMVFL 293 +GGLLSSSCC VQL LN SVGCAGF+VL +RPLF+ LT +SL Y + H P RS+ +A++LA P LV+ N +L M S L SS T + V+L V G++C AC LK AL A G R +V FE G V L Sbjct: 1 MGGLLSSSCCLVQLALNLFSVGCAGFSVLTPYRPLFMGLTTASLGYSHLR-----HGNPQRSILALGMALSLAGMPELVQLYNESQLRLMRSLPLTSSPVSGDKALTQQQVIL--HVEGLRCAACGMRLKQALLAQVGGVQRCEVEFESGRVVL 147
BLAST of NO12G01970 vs. NCBI_GenBank
Match: PRP79476.1 (hypothetical protein PROFUN_12602 [Planoprotostelium fungivorum] >PRP86533.1 hypothetical protein PROFUN_05171 [Planoprotostelium fungivorum]) HSP 1 Score: 93.2 bits (230), Expect = 1.700e-15 Identity = 59/138 (42.75%), Postives = 81/138 (58.70%), Query Frame = 0 Query: 138 LVELLAATVGGLLSSSCCAVQLVLNSISVGCAGFAVLDRFRPLFLFLTFSSLAYKTVTYDIQLHKKPL--RSLPTWLVAVALASAPVLVRRLNRGELSMGSFNLASSLHGTTPRPVMLRYRVRGMKCEACANGLKNAL 274 L+ AA GGLLSSSCC VQLVLN S+GCAGF+VLD FR FL +T+ +L YK V D L + L + T L+ +AL+ +P +VR +N G LS + ++ R + GM CE+CAN ++N + Sbjct: 9 LLTYAAAISGGLLSSSCCVVQLVLNYFSIGCAGFSVLDPFRNTFLSITYGTLFYK-VWRDQTLGRGLLTRENAITSLIVLALSVSPTVVRSINHGRLS------------SEGDLIVKRVEITGMNCESCANSVRNGM 133
BLAST of NO12G01970 vs. NCBI_GenBank
Match: EXX78525.1 (hypothetical protein RirG_014220 [Rhizophagus irregularis DAOM 197198w] >GBC22841.1 hypothetical protein RIR_0977600 [Rhizophagus irregularis DAOM 181602] >POG70912.1 hypothetical protein GLOIN_2v1611697 [Rhizophagus irregularis DAOM 181602=DAOM 197198]) HSP 1 Score: 86.3 bits (212), Expect = 2.000e-13 Identity = 45/132 (34.09%), Postives = 76/132 (57.58%), Query Frame = 0 Query: 144 ATVGGLLSSSCCAVQLVLNSISVGCAGFAVLDRFRPLFLFLTFSSLAYKTVTYDIQLHKKPLRSLPTWLVAVALASAPVLVRRLNRGELSMGSFNLASSLHGTTPRPVMLRYRVRGMKCEACANGLKNALEA 276 A GLL SSCC +QL+LN S+ CAGF++L +RP+FL T + Y Y + ++L T L++++L+++P L+ N+G++++ FNL L T + ++ G+ CE CAN +K ++ Sbjct: 17 AITTGLLGSSCCIIQLILNIFSISCAGFSILTPYRPIFLSFTTVLILYTMTKYGL----NSKQTLVTLLISLSLSTSPELISLYNQGKITISPFNLEKPL---TEEVEIFVVQINGISCEGCANRIKTQFDS 141
BLAST of NO12G01970 vs. NCBI_GenBank
Match: XP_021877284.1 (hypothetical protein BCR41DRAFT_361402 [Lobosporangium transversale] >ORZ05903.1 hypothetical protein BCR41DRAFT_361402 [Lobosporangium transversale]) HSP 1 Score: 84.3 bits (207), Expect = 7.700e-13 Identity = 64/186 (34.41%), Postives = 83/186 (44.62%), Query Frame = 0 Query: 142 LAATVGGLLSSSCCAVQLVLNSISVGCAGFAVLDRFRPLFLFLTFSSLAYKTVTYDIQLHKKPLRSLPTWLVAVALASAPVLVRRLNRGELSMGSFNLASSLHG-------------------------------------TTPRPVMLRY--RVRGMKCEACANGLKNA-LEAMGDLRADVIFEQ 288 L A V GLLSSSCC VQLVLN+ S+GCAGF++L FRP+F +T + Y TV Y + R+ T +A+ L ++P + NR S NL S L TP +LRY + GM CEACAN L+ + G A V F+Q Sbjct: 34 LPAVVLGLLSSSCCTVQLVLNAFSIGCAGFSILTPFRPVFSVITLLLITYTTVKY-----RFSSRTFITLSIAILLTASPEMASIYNRAPSSALQLNLNSVLPDLTLWPPKLLFQKNNFHRHTLATQQETQGALTTNQASFNTPSKALLRYDVHIEGMACEACANRLRQKFISQPGIEHAKVFFDQ 214
BLAST of NO12G01970 vs. NCBI_GenBank
Match: OZJ02503.1 (hypothetical protein BZG36_04841, partial [Bifiguratus adelaidae]) HSP 1 Score: 82.8 bits (203), Expect = 2.200e-12 Identity = 58/146 (39.73%), Postives = 82/146 (56.16%), Query Frame = 0 Query: 149 LLSSSCCAVQLVLNSISVGCAGFAVLDRFRPLFLFLTFSSLAYKTVTYDIQLHKKPLRSLPTWLVAVALASAPVLVRRLNRGELSMGS----FNLASSLHG----TTPRPVMLRYRVRGMKCEACANGLKNALEAMGDLRADVIFE 287 LLSSSCC +QLVLN S+GCAG +VL +R +F L SL Y+ ++ +L K + + LVA+ LA +P +VR N G L +GS SSL TP+ + GMKC+ACAN +K L+A+ + A +F+ Sbjct: 19 LLSSSCCVIQLVLNLFSIGCAGLSVLTPYRWIFTALLVLSL-YRILSTPPRLSKSKVLVV---LVALLLALSPEMVRTWNEGGLVVGSGAARLTRFSSLWNRGKVETPQQQQHVLAIEGMKCDACANRIKRQLQALPGVSAAKVFQ 160
BLAST of NO12G01970 vs. NCBI_GenBank
Match: XP_013905101.1 (hypothetical protein MNEG_1875 [Monoraphidium neglectum] >KIZ06082.1 hypothetical protein MNEG_1875 [Monoraphidium neglectum]) HSP 1 Score: 76.6 bits (187), Expect = 1.600e-10 Identity = 59/179 (32.96%), Postives = 91/179 (50.84%), Query Frame = 0 Query: 125 VVLLRKSRVGKGRLVELLAATVGGLLSSSCCAVQLVLNSISVGCAGFAVLDRFRPLFLFLTFSSLAYKTVTYDIQLHKKPLRSLPTWLVAVALASAPVLVRRLNRGELSMGSFNLASSLHG-----TTPRPVMLRYR--VRGMKCEACANGLKNALEAMGDLR-ADVIFEQGMVFLVAD 296 + + ++ + L +L A GGLLSSSCC VQLVLNS+SVGCAGF+V +R L LT LA + + R++ T + +V L + + +NR S HG P ++R+R V GM+C+ACA ++ ++ A+ +R A V +G V + A+ Sbjct: 1 MAVAKRGAAARTDLAVVLGALTGGLLSSSCCIVQLVLNSLSVGCAGFSVFKPYRNLLRVLTAGMLALLLARHGVN-----RRTIGTVVCSVLLTFSEDALSVINRQGSLQDLLRHMSLPHGGGHPAVQRDPAIVRWRVDVDGMRCQACAARIRGSVAALPGVRNATVELAEGRVEVWAE 174
BLAST of NO12G01970 vs. NCBI_GenBank
Match: ORY95245.1 (hypothetical protein BCR43DRAFT_492678 [Syncephalastrum racemosum]) HSP 1 Score: 72.8 bits (177), Expect = 2.300e-9 Identity = 55/153 (35.95%), Postives = 81/153 (52.94%), Query Frame = 0 Query: 144 ATVG-GLLSSSCCAVQLVLNSISVGCAGFAVLDRFRPLFLFLTFS--SLAYKTVTYDIQLHKKPLRSLPTWLVAVALASAPVLVRRLNRGELSMGSFNLASSLHGTTPRPVMLRYRVRGMKCEACANGLKNALEAMGDLRADVIFEQGMVFLV 294 AT+G LL+SSCC +QLVLN +S+ CAGFAVL +RP F T + +LA++ + +K T VA L ++P LVR +N AS+L RP++L + G+ C ACAN +K L+ + + ++F LV Sbjct: 12 ATIGMALLASSCCVIQLVLNMLSISCAGFAVLTPYRPWFTLATLATMTLAWQRQKKNHDNNKSRRVLFWTGCVAAVLLASPELVRYMNES---------ASTL---DTRPIVL--ELDGLGCLACANKIKQGLKQVPGVADALVFFDNSTALV 150
BLAST of NO12G01970 vs. NCBI_GenBank
Match: EPB85699.1 (hypothetical protein HMPREF1544_07525 [Mucor circinelloides f. circinelloides 1006PhL]) HSP 1 Score: 71.6 bits (174), Expect = 5.200e-9 Identity = 46/128 (35.94%), Postives = 68/128 (53.12%), Query Frame = 0 Query: 149 LLSSSCCAVQLVLNSISVGCAGFAVLDRFRPLFLFLTFSSLAYKTVTYDIQLHKKPLRSLPTWLVAVALASAPVLVRRLNRGELSMGSFNLASSLHGTTPRP-VMLRYRVRGMKCEACANGLKNALEA 276 LLSSSCC +QL+LN SV CAGFAV +R + +T L+Y T + + L +V++ L +P +V+ +N+ A++L TT + R + G+ CEACAN +KN L A Sbjct: 14 LLSSSCCVIQLILNFFSVSCAGFAVFTPYRSVLSTITILLLSYNLATTATAVQTR--HKLVVLIVSILLMVSPEVVQWVNQSS--------ATTLTATTTKSHQYYRIHLDGLGCEACANRIKNTLTA 131
BLAST of NO12G01970 vs. NCBI_GenBank
Match: XP_018290190.1 (hypothetical protein PHYBLDRAFT_147124 [Phycomyces blakesleeanus NRRL 1555(-)] >OAD72150.1 hypothetical protein PHYBLDRAFT_147124 [Phycomyces blakesleeanus NRRL 1555(-)]) HSP 1 Score: 68.6 bits (166), Expect = 4.400e-8 Identity = 49/137 (35.77%), Postives = 69/137 (50.36%), Query Frame = 0 Query: 149 LLSSSCCAVQLVLNSISVGCAGFAVLDRFRPLFLFLTFSSLAYKTVTYDIQLHKKPLRSLPTWLVAVALASAPVLVRRLNRGELSMGSFNLASSLHGTTPRPVMLRYRVRGMKCEACANGLKNALEAMGDLRADVIF 286 LLSSSCC +QL LN S CAGFAVL FRP+ +T L Y K + T LV++ L +P +V +N+ + + L TT V L +G+ C ACAN +K+AL A+ + + +F Sbjct: 22 LLSSSCCIIQLALNFFSFSCAGFAVLTPFRPILTAITIILLTYSFYARG----WKDKKMAGTTLVSIVLLVSPEIVEWINQNQTQ------SQFLAVTTTYLVQL----QGLGCIACANRIKSALLAVDVIESATVF 144 The following BLAST results are available for this feature:
BLAST of NO12G01970 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 10
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO12G01970 ID=NO12G01970|Name=NO12G01970|organism=Nannochloropsis oceanica|type=gene|length=1483bpback to top protein sequence of NO12G01970.1 >NO12G01970.1-protein ID=NO12G01970.1-protein|Name=NO12G01970.1|organism=Nannochloropsis oceanica|type=polypeptide|length=339bpback to top Synonyms
Publications
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