NO12G01940, NO12G01940 (gene) Nannochloropsis oceanica

Overview
NameNO12G01940
Unique NameNO12G01940
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2584
Alignment locationchr12:551079..553662 -

Link to JBrowse

Properties
Property NameValue
DescriptionRrna (Guanine-n-)-methyltransferase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr12genomechr12:551079..553662 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0016740transferase activity
GO:0008168methyltransferase activity
GO:0003723RNA binding
Vocabulary: INTERPRO
TermDefinition
IPR029063SAM-dependent_MTases
IPR000241RNA_methylase_dom
IPR004114THUMP
Vocabulary: Biological Process
TermDefinition
GO:0032259methylation
Homology
BLAST of NO12G01940 vs. NCBI_GenBank
Match: XP_005856119.1 (rrna (guanine-n -)-methyltransferase [Nannochloropsis gaditana CCMP526] >EKU20255.1 rrna (guanine-n -)-methyltransferase [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 880.6 bits (2274), Expect = 3.700e-252
Identity = 472/787 (59.97%), Postives = 554/787 (70.39%), Query Frame = 0
Query:    3 WRRHRQAFFSLSILFLQLDSTQALSTAPRTPPLKQYFAPCSGGLSNILGQELLGRQIGVEKIDVQKRGCAFLATEEAAYRALLWSRTANGIWQLMVRQRGVQSRDDLYGMARRVEWPEAMSVDDSLAVQCVIGGGEISQDITHTHYSSLTIKNAVVDNFRERTGGKRPNVDAEDPVLPLVLFLQNDEAWLYRSLSGTSSLHKRGYRQQMHKSSLRETTAAALLLLAGYEPIDHILVDPMCGSGTIAIEAALIARQIAPGLLRLKRERDLSVLTPSRWPDTDQALLRKVVLEAIKKELPQAPLPIFANDWHPAAIELAKRDAGTAGVFHDLTFSNEDVMDLHLKLQAEDQTTNKIVICNPPWDLRLNGGAAESWEKLGRFLKREAGDGDAFLLSGNPDVTRKLCMKVTMKIPIDQAGMSLRLLHYHVLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQSGPG--ANDCGTGF--TTMMLAATAATPXXXXXXXXXXXXXXXXXXXXXSRKEAMMTV-TSFTMLMMGAVLGAGAWQRPKQTAAV--AVAGTPLHSFSIRNSYDSYAANYDDLDGGSAARWLGLEAARQELIGRAHGRVLECGVGTGLNFPFYKF-QKDGNLVALDAIDLSPGMLREARAKAALLGLGEERVRFHEMDVANLVFADGSFDYVCDTFSLCVYPDPLKALKEMTRVCKPGVGRVLLLENSRSDLQILAAYQDATAHVVARIGGKSCVYNQDVPKLAQAAGLQVVRREKIAGGLFTMLECTR 782
            WR  +    SL  L L  D  QA S     PPLK YFAPCSGGL+ +LGQELL  QIG  +++VQKRGCAFL TEEAAYRALLWSRTANG+WQLMVRQRG+ +R DLY M RR+ W EAMSV+DS+AV CV+GGGE++ DI HTH+SSLT+KNA+VD+FRER+GG+RP+VDA+DPVLPLVLFLQ DEAWLYRSLSG  SLHKRGYRQQMHKSSLRETTAAA+L+LAGY+P  H+L+DPMCGSGT+AIEAAL+AR++APGL RLKRE DL+VLTP+RWPDTD ALLR++V EA  +EL +APLPI  NDWHPAA+ELAKRDAG+AGVFHD+ FS++D  D   +L         +V+CNPPWDLRLN GA ESWE LGRFLKREAG  +AFLLSGNPDVTR L MK   KIPIDQAGMSLRLL Y VLP                                                + +GP   A+D  T    T+  L+ T   P                     SR +A+    +S T L +G +LG      P     V    + +   S S++ +YD YA++YD LDGG AAR+LGL+AAR+ELIGRA G VLECGVGTGLN PFY+F       V+LDAIDLSPGMLREAR+KAA L LG + VRF EMDVA + FAD SFD VCDTFSLCVY DP +ALKEM RVCK   GRVLLLENSRS+L  +AAYQD TA +VAR GGK CVYNQDV  LA+ AGL+V+ ++ + GGL TMLEC R
Sbjct:   28 WRPIKALLASLLPLAL-FDRAQAFS---GHPPLKHYFAPCSGGLATVLGQELLSTQIGAAEVEVQKRGCAFLGTEEAAYRALLWSRTANGVWQLMVRQRGICNRKDLYDMVRRIAWLEAMSVEDSVAVSCVLGGGEVATDIAHTHFSSLTVKNALVDSFRERSGGRRPSVDAKDPVLPLVLFLQRDEAWLYRSLSGPGSLHKRGYRQQMHKSSLRETTAAAVLMLAGYDPERHVLMDPMCGSGTLAIEAALMARRLAPGLTRLKREGDLAVLTPARWPDTDLALLRRLVREAKAQELERAPLPILGNDWHPAAVELAKRDAGSAGVFHDIIFSSQDASD--HRLDGSVARKPNLVVCNPPWDLRLNEGARESWEALGRFLKREAGGAEAFLLSGNPDVTRTLRMKAKRKIPIDQAGMSLRLLQYQVLP---------------------------PRLAGGESEGRAASLRGGPASQATGPSERADDTQTPLRATSTRLSVTPPPP--------QRLARPGIAPVRASRAQALSGAGSSLTTLAVGLLLGCQRSSSPALARNVFDVPSSSVTASQSLKGAYDEYASSYDGLDGGDAARFLGLDAARKELIGRARGHVLECGVGTGLNLPFYEFGSGSAPTVSLDAIDLSPGMLREARSKAAFLNLGPDAVRFREMDVAKMDFADESFDCVCDTFSLCVYLDPAQALKEMARVCKAESGRVLLLENSRSNLLPVAAYQDVTAGIVARYGGKGCVYNQDVASLARQAGLRVMSQKPLLGGLMTMLECAR 773          
BLAST of NO12G01940 vs. NCBI_GenBank
Match: EWM25792.1 (rrna (guanine-n -)-methyltransferase [Nannochloropsis gaditana])

HSP 1 Score: 879.8 bits (2272), Expect = 6.300e-252
Identity = 472/787 (59.97%), Postives = 551/787 (70.01%), Query Frame = 0
Query:    3 WRRHRQAFFSLSILFLQLDSTQALSTAPRTPPLKQYFAPCSGGLSNILGQELLGRQIGVEKIDVQKRGCAFLATEEAAYRALLWSRTANGIWQLMVRQRGVQSRDDLYGMARRVEWPEAMSVDDSLAVQCVIGGGEISQDITHTHYSSLTIKNAVVDNFRERTGGKRPNVDAEDPVLPLVLFLQNDEAWLYRSLSGTSSLHKRGYRQQMHKSSLRETTAAALLLLAGYEPIDHILVDPMCGSGTIAIEAALIARQIAPGLLRLKRERDLSVLTPSRWPDTDQALLRKVVLEAIKKELPQAPLPIFANDWHPAAIELAKRDAGTAGVFHDLTFSNEDVMDLHLKLQAEDQTTNKIVICNPPWDLRLNGGAAESWEKLGRFLKREAGDGDAFLLSGNPDVTRKLCMKVTMKIPIDQAGMSLRLLHYHVLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQSGPGANDCG----TGFTTMMLAATAATPXXXXXXXXXXXXXXXXXXXXXSRKEAMMTV-TSFTMLMMGAVLGAGAWQRPKQTAAV--AVAGTPLHSFSIRNSYDSYAANYDDLDGGSAARWLGLEAARQELIGRAHGRVLECGVGTGLNFPFYKF-QKDGNLVALDAIDLSPGMLREARAKAALLGLGEERVRFHEMDVANLVFADGSFDYVCDTFSLCVYPDPLKALKEMTRVCKPGVGRVLLLENSRSDLQILAAYQDATAHVVARIGGKSCVYNQDVPKLAQAAGLQVVRREKIAGGLFTMLECTR 782
            WR  +    SL  L L  D  QA S     PPLK YFAPCSGGL+ +LGQELL  QIG  +++VQKRGCAFL TEEAAYRALLWSRTANG+WQLMVRQRG+ +R DLY M RRV W EAMSV+DS+AV CV+GGGE++ DI HTH+SSLT+KNA+VD+FRER+GG+RP+VDA+DPVLPLVLFLQ DEAWLYRSLSG  SLHKRGYRQQMHKSSLRETTAAA+L+LAGY+P  H+L+DPMCGSGT+AIEAAL+AR++APGL RLKRE DL+VLTP+RWPDTD ALLR++V EA  +EL +APLPI  NDWHPAA+ELAKRDAG+AGVFHD+ FS++D  D   +L         +V+CNPPWDLRLN GA ESWE LGRFLKREAG  +AFLLSGNPDVTR L MK   KIPIDQAGMSLRLL Y VLP                                                 + GP +   G       T   L AT +T                      SR +A+    +S T L +G +LG      P     V    + +   S S++ +YD YA++YD LDGG AAR+LGL+AAR+ELIGRA G VLECGVGTGLN PFY+F       V+LDAIDLSPGMLREAR+KAA L LG + VRF EMDVA + FAD SFD VCDTFSLCVY DP +ALKEM RVCK   GRVLLLENSRS+L  +AAYQD TA +VAR GGK CVYNQDV  LA+ AGL+V+ ++ + GGL TMLEC R
Sbjct:   28 WRPIKALLASLLPLAL-FDRAQAFS---GHPPLKHYFAPCSGGLATVLGQELLSTQIGAAEVEVQKRGCAFLGTEEAAYRALLWSRTANGVWQLMVRQRGICNRKDLYDMVRRVAWLEAMSVEDSVAVSCVLGGGEVATDIAHTHFSSLTVKNALVDSFRERSGGRRPSVDAKDPVLPLVLFLQRDEAWLYRSLSGPGSLHKRGYRQQMHKSSLRETTAAAVLMLAGYDPERHVLMDPMCGSGTLAIEAALMARRLAPGLTRLKREGDLAVLTPARWPDTDLALLRRLVREAKAQELERAPLPILGNDWHPAAVELAKRDAGSAGVFHDIIFSSQDASD--HRLDGSVARKPNLVVCNPPWDLRLNEGARESWEALGRFLKREAGGAEAFLLSGNPDVTRTLRMKAKRKIPIDQAGMSLRLLQYQVLPPRLAGGESEGRAASL----------------------------------RGGPASQATGPSERVDDTQTPLRAT-STRLSVTPPPPQRLARPGIAPVRASRAQALSGAGSSLTTLAVGLLLGCQRSSSPALARNVFDVPSSSVTASQSLKGAYDEYASSYDGLDGGDAARFLGLDAARKELIGRARGHVLECGVGTGLNLPFYEFGSGSAPTVSLDAIDLSPGMLREARSKAAFLNLGPDAVRFREMDVAKMDFADESFDCVCDTFSLCVYLDPAQALKEMARVCKAESGRVLLLENSRSNLLPVAAYQDVTAGIVARYGGKGCVYNQDVASLARQAGLRVMSQKPLLGGLMTMLECAR 773          
BLAST of NO12G01940 vs. NCBI_GenBank
Match: CBJ31304.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 304.3 bits (778), Expect = 1.100e-78
Identity = 170/412 (41.26%), Postives = 236/412 (57.28%), Query Frame = 0
Query:   30 PRTPPLKQYFAPCSGGLSNILGQELLGRQIGVEKIDVQKRGCAFLATEEAAYRALLWSRTANGIWQLMVRQRG------VQSRDDLYGMARRVEWPEAMSVDDSLAVQCVIGGGEISQDITHTHYSSLTIKNAVVDNFRERTGGKRPNVDAEDPVLPLVLFLQNDEAWLYRSLSGTSSLHKRGYRQQMHKSSLRETTAAALLLLAGYEPIDHILVDPMCGSGTIAIEAALIARQIAPGLLRLKR-----ERDLSVLTP--SRWPDTDQALLRKVVLEAIKKELPQAPLPIFANDWHPAAIELAKRDAGTAGVFHDLTFSNEDVMDLHLKLQAEDQTTNKIVICNPPWDLRLNGGAAESWEKLGRFLKREAGDGDAFLLSGNPDVTRKLCMKVTMKIPIDQAGMSLRLLHYHV 429
            P  P  + YFA C  GL  +L  EL+   +G   +    RGC F   +   Y+A+LW RTA+ + +L V + G      +   + LYG A  V W   M    +L V  ++  G +   +TH+H+++LT+KNAVVD  R+   GKRP+VD E+  LPLV++L    A LYRSLSGT S+HKRGYR  MH +SL+E  AA LLL +G++P    L DPMCGSGT+ IEAALIA + APGL+ +          ++   P  + WPD D  L R+ V EA++ +  + P  I  NDWH  A+ LA RDA  AGV   +T  +EDV       +     +  + + NPPWD RL+ GA +SW  L  FL+RE  + DA++LSGNP ++R L MK    + +   G+ LR L YH+
Sbjct:  261 PLAPGERSYFATCPRGLETVLRDELMSPLVGATLVKSSGRGCHFRGDQAVGYKAILWLRTAHRVLEL-VGEGGSPLGAPIDGGEALYGAAAAVPWSRYMEQGQTLCVDAIL--GVVPDGLTHSHFTALTVKNAVVDQLRD--DGKRPSVDTENADLPLVVYLDRGRALLYRSLSGTRSMHKRGYRDAMHAASLKENVAAGLLLASGWDPETQALADPMCGSGTLVIEAALIALRRAPGLVAMGAYGGGGRAKVAGWKPAVTAWPDFDPVLWRETVGEALQLQRAKPPAAIMGNDWHHGALSLAWRDAKAAGVEDCITLFDEDVG------RWRPPASVGLAVTNPPWDYRLDQGAEKSWLGLLEFLRREVAEKDAWVLSGNPALSRTLRMKSEQNMFLSTGGVELRWLKYHL 661          
BLAST of NO12G01940 vs. NCBI_GenBank
Match: XP_005776733.1 (hypothetical protein EMIHUDRAFT_74188, partial [Emiliania huxleyi CCMP1516] >EOD24304.1 hypothetical protein EMIHUDRAFT_74188, partial [Emiliania huxleyi CCMP1516])

HSP 1 Score: 268.1 bits (684), Expect = 8.700e-68
Identity = 168/410 (40.98%), Postives = 227/410 (55.37%), Query Frame = 0
Query:   25 ALSTAPRTPPLKQYFAPCSGGLSNILGQELLGRQIGVEKIDVQKRGCAFLATEEAAYRALLWSRTANGIWQLMVRQRGVQSRDDLYGMARRVEWPEAMSVDDSLAVQCVIGGGEISQDITHTHYSSLTIKNAVVDNFRERTGGKRPNVDAEDPVLPLVLFLQNDEAWLYRSLSGTSSLHKRGYR--QQMHKSSLRETTAAALLLLAGYEPIDHILVDPMCGSGTIAIEAALIARQIAPGLLRLKRERDLSVLTPSRWPDTDQALLRKVVLEAIKKELPQAPLPIFANDWHPAAIELAKRDAGTAGVFHDLTFSN---EDVMDLHLKLQAEDQTTNKIVICNPPWDLRLNG-GAAESWEKLGRFLKREAGDG--DAFLLSGNPDVTRKLCMKVTMKIPIDQAGMSLRLLHY 427
            ALS APR      YFA   GGL  +L  EL   +IG   +   + G  F    E   RA+LWSRTA  + +L+ R+  V ++  LY  AR V W E ++ +         GGGE    +THTH+S+LT+KNA  D  RE  G  RP+VD  +P +PL L +   EA LYR LSG  SLH+RGYR  + +HK++++E+ AAA+LL AGY+     L DPMCGSGT+ +EAALIA + APGLLR      L      R     +                 AP PI AN+ HP A+ LA+R A  AGV   + FS+    + +  H            +V+ NPPW  RL+  GAA+SW  LG +LKRE  +G   A LLSG+ ++TR L ++ + + P++QAG SLR+L Y
Sbjct:   11 ALSAAPRP---STYFATTLGGLEPVLAAELSSPEIGASAVSCGRLGVHFEGGPEVGARAVLWSRTALRVMELLERREAVHTQASLYDFARAVRWSEVVASEQQTLSVGAGGGGE---PLTHTHFSALTVKNAACDALREERGW-RPSVDRAEPDVPLHLHVHRGEARLYRVLSGAGSLHRRGYRSGEAVHKAAMKESLAAAMLLHAGYDGTSP-LCDPMCGSGTLLVEAALIATRTAPGLLRAS-PPPLVKWGGGRHAAAWEXXXXXXXXXXXXXRRDAAPAPIMANEVHPGALALARRSAAAAGVEALIDFSHGCCSEYVPPH---------APSLVVSNPPWGGRLDADGAADSWAVLGEWLKREGREGRAAAHLLSGSRELTRHLRLRASSRTPVEQAGDSLRILRY 402          
BLAST of NO12G01940 vs. NCBI_GenBank
Match: XP_009035430.1 (hypothetical protein AURANDRAFT_12176, partial [Aureococcus anophagefferens] >EGB09350.1 hypothetical protein AURANDRAFT_12176, partial [Aureococcus anophagefferens])

HSP 1 Score: 259.2 bits (661), Expect = 4.000e-65
Identity = 163/404 (40.35%), Postives = 221/404 (54.70%), Query Frame = 0
Query:   37 QYFAPCSGGLSNILGQELLGRQIGVEKIDVQKRGCAFLATEEAAYRALLWSRTANGIWQLMVRQRGVQSRDDLYGMARRVEWPEAMSVDDSLAVQCVIGGGEISQDITHTHYSSLTIKNAVVDNFRERTG-GKRPNVDAEDPVLPLVLFLQNDEAWLYRSLSGTSSLHKRGYRQQM-HKSSLRETTAAALLLLAGY---EPIDHILVDPMCGSGTIAIEAALIARQIAPGLLRL-------KRERDLSVLTPSRWPDTDQALLRKVVLEAIKKELPQAPLPIFANDWHPAAIELAKRDAGTAGVFHDLTFSNEDVMDLHLKLQAEDQTTNKIVICNPPWDLRLNGGAAESWEKLGRFLKREAGDGDAFLLSGNPDVTRKLCMKVTMKIPIDQAGMSLRLLHYHV 429
            +YFA C  GL  +L  EL G +I   ++ V K GC F        RA L +RTA  + +L+  + GV++  DLY +AR V W   M VD +L V   +G    S  +TH+H+SSLT+KNA+VD+FR     G RP+VD +   +P+ L++  DEA LYR+++ + SLHKRGYR  + HK++LR T AA LL LA +        +L DPMCGSGT+ +EAAL+AR +APGL+R          E  L     + W D D       +           P  I A+D H  A+ LAK  A  A V  D+ F+  D   L L        T  +V+ NPPWD RL+ GA E+W+ LG FL+REA    A  L+GN  VTR L M+ + K  +   G+ LR L Y V
Sbjct:    2 RYFASCCRGLEEVLASELSGPRIRSPEVRVGKSGCEFDGDMGVLLRAGLEARTATKVMELLACEAGVETAQDLYDVARNVPWDALMRVDGTLRVDTTLGRAP-SAALTHSHFSSLTVKNAIVDSFRAGNRLGSRPSVDTKACDVPVHLYVDYDEARLYRAVA-SESLHKRGYRGDVAHKAALRTTVAAGLLYLADWPAKAAAGAVLCDPMCGSGTLPVEAALMARDVAPGLIRAGFGPAGPPSEAPLR-FACTTWLDFDGDAWDAALGXXXXXXXXXXPAQILASDAHDGALRLAKDGARRASVDRDVVFARGDAATLAL------GATPDVVVSNPPWDGRLD-GAEEAWDALGSFLRREAPGATAHALTGNMAVTRNLRMRASSKRKLVSGGVDLRFLKYEV 395          
BLAST of NO12G01940 vs. NCBI_GenBank
Match: KOO31605.1 (rrna (guanine-n -)-methyltransferase [Chrysochromulina sp. CCMP291])

HSP 1 Score: 248.1 bits (632), Expect = 9.300e-62
Identity = 141/296 (47.64%), Postives = 184/296 (62.16%), Query Frame = 0
Query:  136 GGEISQDITHTHYSSLTIKNAVVDNFRERTGGKRPNVDAEDPVLPLVLFLQNDEAWLYRSLSGTSSLHKRGYR--QQMHKSSLRETTAAALLLLAGYEPIDHILVDPMCGSGTIAIEAALIARQIAPGLLRLKRERDLSVLTPSRWPDTDQALLRKVVLEAIKKELPQAPLPIFANDWHPAAIELAKRDAGTAGVFHDLTFSNEDVMDLHLKLQAEDQTTNKIVICNPPWDLRLNGGAAESWEKLGRFLKREAGDGDAFLLSGNPDVTRKLCMKVTMKIPIDQAGMSLRLLHYHVL 430
            GG     + H+H+++LT+KNAV D  RER G  RP+VD ED  LPL L++ N EA LYR LSG +S+HKRGYR  Q +H ++LRET AAA+LL A Y P   +L DPMCGSGTI IEAALIA   APGLL     R    LT  RWPDT  +  R +  EA +   P+AP  I AND     + LA+R A  AGV   ++FS  D          +     ++V+ NPPWD+RL GG  E+W  LG+FL+RE G   A++LSGN ++T+ L M+ + ++ I+ AG SL L+ Y VL
Sbjct:  100 GGSGESGLAHSHFTALTVKNAVCDALRERHGW-RPSVDPEDADLPLFLYVHNGEASLYRVLSGGASMHKRGYRAGQAVHAAALRETLAAAMLLHAEYAPSAQVLCDPMCGSGTIPIEAALIATDTAPGLL-----RPPPALT--RWPDTSPSTWRSLTAEAREARRPRAPCAILANDLIRGNLALAERAASAAGVATSISFSAADA------AAYQPPDAPQLVLTNPPWDIRLEGG-EEAWRSLGQFLRRECGGARAWVLSGNKELTQHLHMRASSRLRIENAGSSLALISYDVL 380          
BLAST of NO12G01940 vs. NCBI_GenBank
Match: PIE24430.1 (hypothetical protein CSA62_03910 [Planctomycetes bacterium])

HSP 1 Score: 234.2 bits (596), Expect = 1.400e-57
Identity = 148/392 (37.76%), Postives = 209/392 (53.32%), Query Frame = 0
Query:   37 QYFAPCSGGLSNILGQELLGRQIGVEKIDVQKRGCAFLATEEAAYRALLWSRTANGIWQLMVRQRGVQSRDDLYGMARRVEWPEAMSVDDSLAVQCVIGGGEISQDITHTHYSSLTIKNAVVDNFRERTGGKRPNVDAEDPVLPLVLFLQNDEAWLYRSLSGTSSLHKRGYRQQMHKSSLRETTAAALLLLAGYEPIDHILVDPMCGSGTIAIEAALIARQIAPGLLRLKRERDLSVLTPSRWPDTDQALLRKVVLEAIKKELPQAPLPIFANDWHPAAIELAKRDAGTAGVFHDLTFSNEDVMDLHLKLQAEDQTTNKIVICNPPWDLRLNGGA--AESWEKLGRFLKREAGDGDAFLLSGNPDVTRKLCMKVTMKIPIDQAGMSLRLLHY 427
            +Y+APCS GL   L  EL  R +G E++     G  F       YRA+LW R+A  + +++ R     +RD  Y  A  ++W + M VD +  ++    G      ITH+ +++L +K+A+ D FR ++ G+RPNVD     LPL L ++ DEA + R L+G  SLHKRGYR    K+ L E  AA LLLL+G++    +L DPMCGSGT  IEAAL+A   APG  R             RW D D++L R++  EA        P  +   D H  AIE+AK  A  AGV   + F +  V  L  K QA       IV+CNPP+  R+  G+   +SW  LG FL   A   DA++LSG+  +T+ L ++   +IP+  A +  R L Y
Sbjct:    4 EYYAPCSLGLEPALAHEL--RSLGAERVHSIPGGAEFFGDRALGYRAVLWLRSAIRVQEILHR-IDASTRDRFYKGALAIDWSQYMDVDQTFQIE----GKVRDSKITHSKFAALVLKDAIADRFR-KSHGRRPNVDKNRADLPLRLLIREDEAVISRDLAG-MSLHKRGYRPLQVKAPLGEAIAAGLLLLSGWDRSSPLL-DPMCGSGTFVIEAALLASGRAPGAQRR--------FALERWIDLDESLWRELRQEAEGSGAQSLPFDLLGADRHAGAIEIAKSSARAAGVAKLVRFEHSPVSSLRPK-QAPG-----IVVCNPPYGERIGRGSDLTQSWRDLGSFLHDHADGADAWILSGDKFLTKALGLRARRRIPVQNANIDCRWLAY 371          
BLAST of NO12G01940 vs. NCBI_GenBank
Match: XP_024397385.1 (uncharacterized protein LOC112292794 isoform X2 [Physcomitrella patens] >PNR39322.1 hypothetical protein PHYPA_019600 [Physcomitrella patens])

HSP 1 Score: 225.7 bits (574), Expect = 5.000e-55
Identity = 155/466 (33.26%), Postives = 220/466 (47.21%), Query Frame = 0
Query:   35 LKQYFAPCSGGLSNILGQELLGRQIGVEKIDVQKRGCAFLATEEAAYRALLWSRTANGIWQLMVR---QRGVQSRDDLYGMAR-RVEWPEAMSVDDSLAVQCVIG-------------GGEISQ----------------------------DITHTHYSSLTIKNAVVDNFRERTGGKRPNV---DAEDPVLPLVLFLQNDEAWLYRSLSGTSSLHKRGYRQQMHKSSLRETTAAALLLLAGYEPI--------------DHILVDPMCGSGTIAIEAALIARQIAPGLLRLKRERDLSVLTPSRWPDTDQALLRKVVLEAIK-KELPQAPLPIFANDWHPAAIELAKRDAGTAGVFHDLTFSNEDVMDLHLKLQAEDQTTNKIVICNPPWDLRL-------NGGAAESWEKLGRFLKREAGDGDAFLLSGNPDVTRKLCMKVTMKIPIDQAGMSLRLLHYHVLP 431
            L +YFA C+ GL  +L  EL    IG ++++V K G +F+  +   Y+A LW RTA  +   +       G    D +Y   R  ++WP  +  D S   Q                 G E+S                             DI ++ ++S+  K+A+ D  RE  GG RP           +PL LFL  DEA LYR +SG  SLHKRGYR  MH++SL E  AAA+L +AG+                 + +L+DPMCGSGT  IEAAL+A  +APGL+R +           +W D D+   ++    A+  ++   + + +  ND H  A+ L  RDA TAGV H L  S +D+ +       +      +V+ NPPW  RL       N    E+W+ LGRFLK +    D + LSGN +VTR + M+   K P+   G   +LLHYHVLP
Sbjct:  106 LTKYFATCAPGLETVLAAELSSPLIGAQEVEVGKAGVSFVGLKVTGYKASLWLRTAVRVLVQLAAGPLPEGRGRNDPVYTFIRDAIDWPSILLDDSSSHTQQPDSNERYRPRSNSGGRGDEMSNSRAGTATHSAQAPRFRNFGVQSRVWSCTDIHNSAFASVRAKDAICDAMREACGGHRPEPPEHGGSTADVPLFLFLFRDEAVLYRDMSGV-SLHKRGYRDVMHRASLNEGIAAAVLTIAGWNRAVPGFGDANVNAPGEERVLLDPMCGSGTFLIEAALMASNVAPGLMRRQ-------WPFQKWHDFDENAWKQCKDNAVSMQQSSLSGVRLLGNDIHAGALSLCHRDASTAGVRHLLELSCKDIQEY------KPLVVPSLVVTNPPWGERLIDSRNEENEWVYETWQGLGRFLKSQCSCADVYALSGNAEVTRAMHMRADKKWPLVIGGQERKLLHYHVLP 557          
BLAST of NO12G01940 vs. NCBI_GenBank
Match: XP_024397384.1 (uncharacterized protein LOC112292794 isoform X1 [Physcomitrella patens])

HSP 1 Score: 224.6 bits (571), Expect = 1.100e-54
Identity = 155/469 (33.05%), Postives = 220/469 (46.91%), Query Frame = 0
Query:   35 LKQYFAPCSGGLSNILGQELLGRQIGVEKIDVQKRGCAFLATEEAAYRALLWSRTANGIWQLMVR---QRGVQSRDDLYGMAR-RVEWPEAMSVDDSLAVQCVIG-------------GGEISQ----------------------------DITHTHYSSLTIKNAVVDNFRERTGGKRPNV---DAEDPVLPLVLFLQNDEAWLYRSLSGTSSLHKRGYRQQMHKSSLRETTAAALLLLAGYEPI--------------DHILVDPMCGSGTIAIEAALIARQIAPGLLRLKRERDLSVLTPSRWPDTDQALLRKVVLEAIK-KELPQAPLPIFANDWHPAAIELAKRDAGTAGVFHDLTFSNEDVMDLHLKLQAEDQTTNKIVICNPPWDLRL----------NGGAAESWEKLGRFLKREAGDGDAFLLSGNPDVTRKLCMKVTMKIPIDQAGMSLRLLHYHVLP 431
            L +YFA C+ GL  +L  EL    IG ++++V K G +F+  +   Y+A LW RTA  +   +       G    D +Y   R  ++WP  +  D S   Q                 G E+S                             DI ++ ++S+  K+A+ D  RE  GG RP           +PL LFL  DEA LYR +SG  SLHKRGYR  MH++SL E  AAA+L +AG+                 + +L+DPMCGSGT  IEAAL+A  +APGL+R +           +W D D+   ++    A+  ++   + + +  ND H  A+ L  RDA TAGV H L  S +D+ +       +      +V+ NPPW  RL          N    E+W+ LGRFLK +    D + LSGN +VTR + M+   K P+   G   +LLHYHVLP
Sbjct:  106 LTKYFATCAPGLETVLAAELSSPLIGAQEVEVGKAGVSFVGLKVTGYKASLWLRTAVRVLVQLAAGPLPEGRGRNDPVYTFIRDAIDWPSILLDDSSSHTQQPDSNERYRPRSNSGGRGDEMSNSRAGTATHSAQAPRFRNFGVQSRVWSCTDIHNSAFASVRAKDAICDAMREACGGHRPEPPEHGGSTADVPLFLFLFRDEAVLYRDMSGV-SLHKRGYRDVMHRASLNEGIAAAVLTIAGWNRAVPGFGDANVNAPGEERVLLDPMCGSGTFLIEAALMASNVAPGLMRRQ-------WPFQKWHDFDENAWKQCKDNAVSMQQSSLSGVRLLGNDIHAGALSLCHRDASTAGVRHLLELSCKDIQEY------KPLVVPSLVVTNPPWGERLIDSRFCRNEENEWVYETWQGLGRFLKSQCSCADVYALSGNAEVTRAMHMRADKKWPLVIGGQERKLLHYHVLP 560          
BLAST of NO12G01940 vs. NCBI_GenBank
Match: CEL92165.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 218.4 bits (555), Expect = 7.900e-53
Identity = 149/495 (30.10%), Postives = 239/495 (48.28%), Query Frame = 0
Query:   35 LKQYFAPCSGGLSNILGQEL--LGRQI--GVEKID-------VQKRGCAFLATEE--AAYRALLW----SRTANGIWQLMVRQRGVQSRDDLYGMARRVEWPEAMSVDDSLAVQCVIGGGEISQDITHTHYSSLTIKNAVVDNFRERTGGKRPNVDAEDPVLPLVLFLQNDEAWLYRSLSGTSSLHKRGYRQQMHKSSLRETTAAALLLLAGYEPID-HILVDPMCGSGTIAIEAALIARQIAPGLLRLK----------------------RERDLSVLT-----------PS-----------------------------------------RWPDTDQALLRKVVLEAIKKEL------PQAPLPIFANDWHPAAIELAKRDAGTAGVFHDLTFSNEDVMDLHLKLQAEDQTTNKIVICNPPWDLRLNGGAAESWEKLGRFLKREAGDGDAFLLSG---NPDVTRKLCMKVTMKIPIDQAGMSLRLLHYHV 429
            ++++F PC+ GL  I+  E+  +  Q+  G + +D         KRG     +++  AA +   W     RT   + + +     ++ RDDL+     ++W   MSV D+L+VQ  + G ++  D+ HTH+++LT+K+A+V  F  R    RP+VD  DP LPL ++L      LYR+ SG  SLHKRGYR++M K++LRET AA +L ++ ++P    +L+DPMCGSGTI IEAAL+A +  PG++RL+                        R +S+LT           PS                                         RWPD D+ + R V+ + ++ E        +AP+ I+ +D    AI +A+  A  AGV   +  S+ D+  L L  + +      +++ NPPWD+RLN  A  +WE +  F+   AG G A+LL G     ++   + M+   K  I Q G+ + L  + +
Sbjct:    1 MREFFVPCAAGLETIVEMEMRRITEQLAGGRDALDGGSVVTKQSKRGVTLWVSKDIPAAVQLPYWLTVCLRTGQRVLERIDGPVELRERDDLWSWVNAIDWRPYMSVQDTLSVQVTL-GNDVPSDLRHTHFTALTVKDAIVKQFLTRDKSARPSVDFVDPDLPLFVYLHQGRGTLYRAWSGAGSLHKRGYRKKMPKAALRETMAAGMLYVSQWDPQSRQVLLDPMCGSGTIPIEAALMATRRMPGVVRLETFLADMNVEPYRTKGTRVAPDAESRAVSLLTHLHRTYDAPPRPSLGEDCRHDNYGDDLDGGLYDSDGDSVINGMMSPVVRPFPFCRWPDFDEPVWRSVLRKCVEGERDIAAEGAEAPVIIYGSDRQEGAIAMARDAARRAGVSEHVQLSHNDIAHLQLPHRHKPD----VIVSNPPWDIRLNSDAGAAWEAMRAFVCERAGGGRAWLLCGGDARDELFGAMRMRAAKKRRIVQGGVEMSLRAFDI 490          
The following BLAST results are available for this feature:
BLAST of NO12G01940 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005856119.13.700e-25259.97rrna (guanine-n -)-methyltransferase [Nannochlorop... [more]
EWM25792.16.300e-25259.97rrna (guanine-n -)-methyltransferase [Nannochlorop... [more]
CBJ31304.11.100e-7841.26conserved unknown protein [Ectocarpus siliculosus][more]
XP_005776733.18.700e-6840.98hypothetical protein EMIHUDRAFT_74188, partial [Em... [more]
XP_009035430.14.000e-6540.35hypothetical protein AURANDRAFT_12176, partial [Au... [more]
KOO31605.19.300e-6247.64rrna (guanine-n -)-methyltransferase [Chrysochromu... [more]
PIE24430.11.400e-5737.76hypothetical protein CSA62_03910 [Planctomycetes b... [more]
XP_024397385.15.000e-5533.26uncharacterized protein LOC112292794 isoform X2 [P... [more]
XP_024397384.11.100e-5433.05uncharacterized protein LOC112292794 isoform X1 [P... [more]
CEL92165.17.900e-5330.10unnamed protein product [Vitrella brassicaformis C... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL124nonsL124Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR014ncniR014Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR006ngnoR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010119NSK010119Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO12G01940.1NO12G01940.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|592233gene_5351Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100021g11gene4675Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO12G01940.1NO12G01940.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO12G01940 ID=NO12G01940|Name=NO12G01940|organism=Nannochloropsis oceanica|type=gene|length=2584bp
ACAGGGCTTGAGTAAAGCACAGGGATTATCGGCATATTTTCTGGTATGAC
GTGGCGGCGGCATCGACAGGCTTTTTTTTCCCTGTCCATCCTCTTCCTCC
AACTCGACTCCACCCAAGCCCTTTCGACTGCTCCTCGGACACCACCATTG
AAGCAGTACTTTGCACCATGCTCGGGCGGGCTGTCCAATATTTTGGGTCA
AGAACTACTGGGTCGGCAGATTGGGGTGGAAAAAATCGACGTACAAAAAA
GGGGATGTGCATTTCTCGCTACAGAGGAAGCTGCATACAGGGCCTTGCTC
TGGAGCCGCACCGCCAACGGAATATGGCAGCTCATGGTGAGACAACGCGG
GGTGCAGAGCCGGGATGATCTGTATGGTATGGCACGGAGAGTGGAGTGGC
CAGAGGCGATGAGTGTAGACGACTCTCTGGCTGTGCAGTGCGTCATAGGG
GGAGGCGAAATTTCGCAGGACATCACCCACACCCACTACTCCTCTCTCAC
GATCAAGAACGCCGTGGTCGACAACTTCCGTGAACGTACAGGTGGGAAAA
GACCAAATGTCGACGCCGAAGACCCCGTCCTCCCCCTCGTCCTCTTCCTG
CAAAATGATGAAGCCTGGCTCTATCGTTCCCTAAGCGGCACCTCCTCCCT
CCACAAGCGAGGCTACCGTCAACAAATGCACAAGTCCTCTCTCCGGGAAA
CCACTGCTGCGGCCCTACTCCTTCTCGCAGGGTATGAGCCAATAGATCAT
ATTTTGGTCGATCCTATGTGTGGTTCTGGCACTATAGCAATCGAAGCCGC
CCTTATCGCACGTCAAATCGCTCCCGGCCTCCTCCGCCTGAAGCGTGAAC
GTGACCTCTCCGTCCTCACACCCTCCCGGTGGCCCGACACCGACCAAGCC
CTCCTTAGGAAGGTCGTTCTGGAAGCTATTAAAAAAGAGCTACCACAGGC
CCCACTCCCAATATTTGCCAATGACTGGCATCCTGCTGCAATTGAACTTG
CAAAACGCGATGCTGGCACGGCGGGTGTCTTCCACGACTTGACCTTCAGC
AACGAAGACGTCATGGATCTGCATTTGAAATTACAAGCAGAAGACCAAAC
AACGAACAAGATCGTGATATGTAACCCTCCGTGGGATCTGCGTTTAAATG
GAGGGGCAGCGGAAAGTTGGGAGAAGCTTGGGAGGTTCCTGAAGAGGGAG
GCGGGGGATGGCGATGCTTTCCTTCTGTCTGGAAACCCGGATGTGACCCG
AAAATTGTGCATGAAGGTAACGATGAAGATCCCAATTGATCAGGCGGGGA
TGAGTTTGAGATTATTGCATTATCATGTGTTGCCTCCCAAACCACCACGT
ATGGACGGGGAGGAGGAGGAGGACGGCGGGAGGGAGAGTGATAGAAGGGG
GGGAGGTCTCAACTCTGCCCCCCCCTCACCAGCGCAACCAGCACAGAAGG
CCTCGTCCTCTCTCTCGTCCCCACCAACCCGTCAATCAGGGCCGGGAGCA
AATGATTGCGGAACTGGTTTCACCACCATGATGTTGGCTGCAACAGCAGC
TACACCCTTTCCTCCCTCTTTCCCCTCCTCCGCGTCCCCCTCCTCCTCGC
TCTCGTCTTCTCACTCCATTTCCCGCAAAGAAGCAATGATGACAGTCACC
TCCTTCACCATGCTAATGATGGGTGCCGTTCTCGGTGCCGGGGCATGGCA
ACGCCCCAAACAAACAGCTGCAGTCGCAGTTGCGGGAACTCCTCTCCACT
CTTTCTCAATAAGAAATTCCTACGATTCATACGCTGCCAACTACGACGAC
TTAGATGGAGGAAGTGCAGCTCGCTGGCTCGGGCTGGAAGCAGCCCGTCA
AGAGCTCATCGGACGCGCGCACGGCCGGGTGTTGGAATGTGGGGTCGGTA
CAGGTCTCAATTTTCCATTTTACAAATTCCAGAAAGATGGAAACCTAGTG
GCATTGGATGCGATTGATCTGAGCCCGGGAATGCTGCGGGAAGCAAGGGC
CAAGGCCGCATTGTTAGGGTTGGGGGAAGAGAGGGTGCGTTTTCACGAGA
TGGATGTGGCCAACTTGGTATTTGCGGATGGAAGCTTTGACTATGTGTGT
GACACCTTTTCACTGTGCGTGTACCCAGATCCATTGAAAGCTTTAAAAGA
GATGACAAGGGTGTGTAAACCTGGTGTAGGACGGGTGTTGCTCTTGGAGA
ATAGCCGGAGCGACCTACAAATATTGGCGGCGTATCAAGATGCTACTGCC
CATGTGGTGGCCCGCATTGGTGGCAAATCATGCGTGTACAACCAGGACGT
ACCCAAGCTCGCACAAGCAGCGGGGTTGCAAGTGGTGCGGAGGGAAAAAA
TTGCGGGGGGACTCTTTACGATGTTGGAGTGTACGCGCAGGCTTTGAAAA
GGGTTTGGTGGGAGGCAGGAAAGGGTAGAGGGATGGAGGTTATACACAGG
TCGGCAAGCGCTCGGATAAAGTGCAATTGACGCACAAAGCAGAGAGTATT
TGAACAAATGCATGGCTTGAAATGTTGAAAAATATAAATGTAAACTTTAC
ACTGGAAAAAATGAAGAAAAAAACATCCCCGTGC
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protein sequence of NO12G01940.1

>NO12G01940.1-protein ID=NO12G01940.1-protein|Name=NO12G01940.1|organism=Nannochloropsis oceanica|type=polypeptide|length=784bp
MTWRRHRQAFFSLSILFLQLDSTQALSTAPRTPPLKQYFAPCSGGLSNIL
GQELLGRQIGVEKIDVQKRGCAFLATEEAAYRALLWSRTANGIWQLMVRQ
RGVQSRDDLYGMARRVEWPEAMSVDDSLAVQCVIGGGEISQDITHTHYSS
LTIKNAVVDNFRERTGGKRPNVDAEDPVLPLVLFLQNDEAWLYRSLSGTS
SLHKRGYRQQMHKSSLRETTAAALLLLAGYEPIDHILVDPMCGSGTIAIE
AALIARQIAPGLLRLKRERDLSVLTPSRWPDTDQALLRKVVLEAIKKELP
QAPLPIFANDWHPAAIELAKRDAGTAGVFHDLTFSNEDVMDLHLKLQAED
QTTNKIVICNPPWDLRLNGGAAESWEKLGRFLKREAGDGDAFLLSGNPDV
TRKLCMKVTMKIPIDQAGMSLRLLHYHVLPPKPPRMDGEEEEDGGRESDR
RGGGLNSAPPSPAQPAQKASSSLSSPPTRQSGPGANDCGTGFTTMMLAAT
AATPFPPSFPSSASPSSSLSSSHSISRKEAMMTVTSFTMLMMGAVLGAGA
WQRPKQTAAVAVAGTPLHSFSIRNSYDSYAANYDDLDGGSAARWLGLEAA
RQELIGRAHGRVLECGVGTGLNFPFYKFQKDGNLVALDAIDLSPGMLREA
RAKAALLGLGEERVRFHEMDVANLVFADGSFDYVCDTFSLCVYPDPLKAL
KEMTRVCKPGVGRVLLLENSRSDLQILAAYQDATAHVVARIGGKSCVYNQ
DVPKLAQAAGLQVVRREKIAGGLFTMLECTRRL*
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Synonyms
Publications