NO12G01930, NO12G01930 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO12G01930 vs. NCBI_GenBank
Match: EWM25797.1 (deoxynucleotidyltransferase terminal-interacting protein 2 [Nannochloropsis gaditana]) HSP 1 Score: 267.3 bits (682), Expect = 5.100e-68 Identity = 145/232 (62.50%), Postives = 178/232 (76.72%), Query Frame = 0 Query: 42 IEEGESEDDD---IIRLDSVPPSSLTGPPMAPKQRQLMQDASRMGNVRFETGLPIPSYFRFEKVGKAQQTSLDPNAKVMTAQMLSALKHKAGTAAPKPRQALINSAAGCYSK--KGNTSGARVTQGVYERDKEREQDAKMLLMRNYIDPKRFYKGLESLAPDFQIGTVIEGRLDSVNGRLPRRQRKRTFVDEILADRGVRSYTKKKFASIQEANKSGRKGQYKARQLKNKPK 269 I + ESE+D +I LD+ P +L P+QR+L+Q ASR+GN+RFETGLP PSYF+FEK+GK Q+ + PNAK + A S+L+ KA TAA PR+ +NS A + K G +G + TQGVYERDKEREQDAKMLLMRNY+DPKRFYKGLE LAPDFQ+GTVIEGR+D ++ R+PRR RKRTFVDEILADRGVR Y+KKKF +IQE K+GRKG Y+ARQ K+KPK Sbjct: 114 IHDDESEEDSGNGMILLDATPSHAL-----LPQQRRLVQGASRLGNMRFETGLPTPSYFQFEKLGKTQKAMVVPNAKQVAASKQSSLQLKADTAAHMPRK--VNSGAVLHRKGAGGGITGMKTTQGVYERDKEREQDAKMLLMRNYMDPKRFYKGLEGLAPDFQVGTVIEGRMDPMHARMPRRDRKRTFVDEILADRGVRRYSKKKFLAIQETKKAGRKGLYRARQQKHKPK 338
BLAST of NO12G01930 vs. NCBI_GenBank
Match: XP_005856119.1 (rrna (guanine-n -)-methyltransferase [Nannochloropsis gaditana CCMP526] >EKU20255.1 rrna (guanine-n -)-methyltransferase [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 265.8 bits (678), Expect = 1.500e-67 Identity = 144/232 (62.07%), Postives = 178/232 (76.72%), Query Frame = 0 Query: 42 IEEGESEDDD---IIRLDSVPPSSLTGPPMAPKQRQLMQDASRMGNVRFETGLPIPSYFRFEKVGKAQQTSLDPNAKVMTAQMLSALKHKAGTAAPKPRQALINSAAGCYSK--KGNTSGARVTQGVYERDKEREQDAKMLLMRNYIDPKRFYKGLESLAPDFQIGTVIEGRLDSVNGRLPRRQRKRTFVDEILADRGVRSYTKKKFASIQEANKSGRKGQYKARQLKNKPK 269 I + ESE+D +I LD+ P +L P+QR+L+Q ASR+GN+RFETGLP PSYF+FEK+GK Q+ + PNAK + A S+L+ KA TAA PR+ +NS A + K G +G + TQGVYERDKER+QDAKMLLMRNY+DPKRFYKGLE LAPDFQ+GTVIEGR+D ++ R+PRR RKRTFVDEILADRGVR Y+KKKF +IQE K+GRKG Y+ARQ K+KPK Sbjct: 828 IHDDESEEDSGNGMILLDATPSHAL-----LPQQRRLVQGASRLGNMRFETGLPTPSYFQFEKLGKTQKAMVVPNAKQVAASKQSSLQLKADTAAHMPRK--VNSGAVLHRKGAGGGITGMKTTQGVYERDKERKQDAKMLLMRNYMDPKRFYKGLEGLAPDFQVGTVIEGRMDPMHARMPRRDRKRTFVDEILADRGVRRYSKKKFLAIQETKKAGRKGLYRARQQKHKPK 1052
BLAST of NO12G01930 vs. NCBI_GenBank
Match: XP_022786472.1 (deoxynucleotidyltransferase terminal-interacting protein 2-like [Stylophora pistillata] >PFX28149.1 Deoxynucleotidyltransferase terminal-interacting protein 2 [Stylophora pistillata]) HSP 1 Score: 95.9 bits (237), Expect = 2.000e-16 Identity = 51/101 (50.50%), Postives = 67/101 (66.34%), Query Frame = 0 Query: 169 EREQDAKMLLMRNYIDPKRFYKGLES--LAPDFQIGTVIEGRLDSVNGRLPRRQRKRTFVDEILADRGVRSYTKKKFASIQEANKSGRKGQYKARQLKNKP 268 E E+D K++ MRN +D KR YK +S L FQIGTV+EG D + R+P+RQRK +DE+LAD R Y KKK+ IQ A +SG+KG YK ++ K KP Sbjct: 197 EIERDMKLMKMRNVLDKKRHYKKNDSSALPKYFQIGTVVEGSADFYSSRIPKRQRKTNMIDELLADAEFRRYNKKKYLEIQAAKQSGKKGFYKKKKNKRKP 297
BLAST of NO12G01930 vs. NCBI_GenBank
Match: XP_004345151.2 (hypothetical protein CAOG_06402 [Capsaspora owczarzaki ATCC 30864]) HSP 1 Score: 92.0 bits (227), Expect = 2.900e-15 Identity = 47/101 (46.53%), Postives = 66/101 (65.35%), Query Frame = 0 Query: 169 EREQDAKMLLMRNYIDPKRFYKGLES--LAPDFQIGTVIEGRLDSVNGRLPRRQRKRTFVDEILADRGVRSYTKKKFASIQEANKSGRKGQYKARQLKNKP 268 E E+D ++L MRNY+DPK+ +KG +S L FQI V+EG + + RL R++RK T VDE++AD +R Y K+KF I++ N GR+G K Q K KP Sbjct: 142 EVERDLRLLRMRNYLDPKKHFKGSDSKALPKHFQIARVVEGPTEFYSSRLTRKERKNTLVDELMADDRLRKYHKRKFVEIEQRNAQGRRGHVKRLQQKRKP 242
BLAST of NO12G01930 vs. NCBI_GenBank
Match: KJE96029.1 (hypothetical protein, variant [Capsaspora owczarzaki ATCC 30864]) HSP 1 Score: 92.0 bits (227), Expect = 2.900e-15 Identity = 47/101 (46.53%), Postives = 66/101 (65.35%), Query Frame = 0 Query: 169 EREQDAKMLLMRNYIDPKRFYKGLES--LAPDFQIGTVIEGRLDSVNGRLPRRQRKRTFVDEILADRGVRSYTKKKFASIQEANKSGRKGQYKARQLKNKP 268 E E+D ++L MRNY+DPK+ +KG +S L FQI V+EG + + RL R++RK T VDE++AD +R Y K+KF I++ N GR+G K Q K KP Sbjct: 49 EVERDLRLLRMRNYLDPKKHFKGSDSKALPKHFQIARVVEGPTEFYSSRLTRKERKNTLVDELMADDRLRKYHKRKFVEIEQRNAQGRRGHVKRLQQKRKP 149
BLAST of NO12G01930 vs. NCBI_GenBank
Match: KJE96028.1 (hypothetical protein CAOG_006402 [Capsaspora owczarzaki ATCC 30864]) HSP 1 Score: 92.0 bits (227), Expect = 2.900e-15 Identity = 47/101 (46.53%), Postives = 66/101 (65.35%), Query Frame = 0 Query: 169 EREQDAKMLLMRNYIDPKRFYKGLES--LAPDFQIGTVIEGRLDSVNGRLPRRQRKRTFVDEILADRGVRSYTKKKFASIQEANKSGRKGQYKARQLKNKP 268 E E+D ++L MRNY+DPK+ +KG +S L FQI V+EG + + RL R++RK T VDE++AD +R Y K+KF I++ N GR+G K Q K KP Sbjct: 102 EVERDLRLLRMRNYLDPKKHFKGSDSKALPKHFQIARVVEGPTEFYSSRLTRKERKNTLVDELMADDRLRKYHKRKFVEIEQRNAQGRRGHVKRLQQKRKP 202
BLAST of NO12G01930 vs. NCBI_GenBank
Match: XP_020912527.1 (rRNA-processing protein fcf2-like isoform X1 [Exaiptasia pallida] >KXJ23595.1 rRNA-processing protein fcf2 [Exaiptasia pallida]) HSP 1 Score: 92.0 bits (227), Expect = 2.900e-15 Identity = 51/105 (48.57%), Postives = 66/105 (62.86%), Query Frame = 0 Query: 165 ERDKEREQDAKMLLMRNYIDPKRFYKGLES--LAPDFQIGTVIEGRLDSVNGRLPRRQRKRTFVDEILADRGVRSYTKKKFASIQEANKSGRKGQYKARQLKNKP 268 E E EQD K+L +RN +D KR YK +S L FQ+GTV+EG D + RL +R RK T VDE+LAD R Y KKK+ IQ + +SG+KG YK + + KP Sbjct: 173 EMTPEIEQDLKILKLRNVLDRKRHYKKNDSKTLPKYFQVGTVVEGAADFYSSRLSKRDRKSTIVDELLADTEFRRYNKKKYLEIQSSKQSGKKGFYKKKMNRRKP 277
BLAST of NO12G01930 vs. NCBI_GenBank
Match: XP_001626745.1 (predicted protein [Nematostella vectensis] >EDO34645.1 predicted protein, partial [Nematostella vectensis]) HSP 1 Score: 92.0 bits (227), Expect = 2.900e-15 Identity = 50/101 (49.50%), Postives = 65/101 (64.36%), Query Frame = 0 Query: 169 EREQDAKMLLMRNYIDPKRFYKGLES--LAPDFQIGTVIEGRLDSVNGRLPRRQRKRTFVDEILADRGVRSYTKKKFASIQEANKSGRKGQYKARQLKNKP 268 E +Q+ K+L MR+ +DPKR YK +S L FQ+GTV+EG D + R+P+R RK V E+LAD R Y KKKF IQ A +SGRKG YK + + KP Sbjct: 19 ELKQELKVLKMRHILDPKRHYKKNDSKELPKYFQMGTVVEGAADFYSSRIPKRSRKNNIVQELLADAQFRRYNKKKFLEIQAAKESGRKGFYKKKTNRRKP 119
BLAST of NO12G01930 vs. NCBI_GenBank
Match: NP_594087.3 (putative rRNA processing protein Fcf2 [Schizosaccharomyces pombe] >O42877.1 RecName: Full=rRNA-processing protein fcf2 >CAA15924.1 rRNA processing protein Fcf2 (predicted) [Schizosaccharomyces pombe]) HSP 1 Score: 91.7 bits (226), Expect = 3.800e-15 Identity = 72/229 (31.44%), Postives = 111/229 (48.47%), Query Frame = 0 Query: 53 IRLDSVPPSSLTGPPMAPKQRQLMQDASRMGNVRFETGLP--------IPSYFRFEKVGKAQQTSLDPNAKVMTAQMLSALKHKAGTAAPKPRQALINSAAGCYSKKGN---TSGAR-VTQGVYERDKEREQDAKMLLMRNYIDPKRFYK--GLESLAPDFQIGTVIEGRLDSVNGRLPRRQRKRTFVDEILADRGVRSYTKKKFASIQEANKSGRKGQYKARQLKNKP 268 + +D S L + Q + D + G + T +P +PSYF + V ++ L N++ + + A P SA G KK N T+G+ E + ++D ++L MRN +DPKR Y+ +S+ FQ+G+++EG D + R+P R+RK T VDE+L D RSY KKK+ +Q++ SGRKGQYK Q + KP Sbjct: 6 LSVDLATISKLLESAKSTLQEKQASDDDKHGQQKLLTKIPKIISSSFELPSYFEKKFVMGLKKDELVENSE--------SYINDASFEPTVPIYESHVSAPGISKKKKNIKDTAGSNWFDMPATELTESVKRDIQLLKMRNALDPKRHYRRENTKSMPKYFQVGSIVEGPQDFYSSRIPTRERKETIVDELLHDSERRSYFKKKYLELQKSKMSGRKGQYKKLQQRRKP 226
BLAST of NO12G01930 vs. NCBI_GenBank
Match: XP_020625135.1 (deoxynucleotidyltransferase terminal-interacting protein 2-like [Orbicella faveolata]) HSP 1 Score: 89.7 bits (221), Expect = 1.500e-14 Identity = 49/100 (49.00%), Postives = 64/100 (64.00%), Query Frame = 0 Query: 169 EREQDAKMLLMRNYIDPKRFYKGLES--LAPDFQIGTVIEGRLDSVNGRLPRRQRKRTFVDEILADRGVRSYTKKKFASIQEANKSGRKGQYKARQLKNK 267 E EQD K++ MRN +D KR YK +S L FQIGTV+EG D R+P+RQRK +DE+L+D R Y KKK+ IQ A +SG+KG +K + K K Sbjct: 189 EIEQDMKVIKMRNILDRKRHYKKNDSSALPKYFQIGTVVEGSADFYTSRIPKRQRKSNLIDELLSDAEFRRYNKKKYLEIQAAKQSGKKGFHKKKTNKRK 288 The following BLAST results are available for this feature:
BLAST of NO12G01930 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO12G01930 ID=NO12G01930|Name=NO12G01930|organism=Nannochloropsis oceanica|type=gene|length=950bpback to top protein sequence of NO12G01930.1 >NO12G01930.1-protein ID=NO12G01930.1-protein|Name=NO12G01930.1|organism=Nannochloropsis oceanica|type=polypeptide|length=269bpback to top Synonyms
Publications
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