NO12G01920, NO12G01920 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO12G01920 vs. NCBI_GenBank
Match: XP_005856106.1 (seryl-tRNA synthetase [Nannochloropsis gaditana CCMP526] >EKU20242.1 seryl-tRNA synthetase [Nannochloropsis gaditana CCMP526] >EWM25831.1 seryl-trna synthetase [Nannochloropsis gaditana]) HSP 1 Score: 767.7 bits (1981), Expect = 2.400e-218 Identity = 397/524 (75.76%), Postives = 443/524 (84.54%), Query Frame = 0 Query: 8 KISTCLKTTMLLLVLVTPSARAFHV---ASLG--RRPLSDSSARYFSRHRFGRQH--RQEGVSMMAERPSSAGKGLDVRLVTDEPDLVMAHLKARHASEEQMSSVDDVGSLNRRRKELVKEQQGALAQRKMLSAEIGKLMKEKKNEEATKLKSQVEYASSVAATAEEQLLDLEQEMELLMYQIPNLLDDRVPEGKDEEANVVVTEWGTDKRKIGEGFLWHDDIASKVGGYDPSAAAKLSGARFSVLSGPVARLERAIIQFFLDRHTDRNGYREVSVPYIVSRSTLTGTGQLPKFENDLFAVNHQVNGEDAFLIPTAEVPITNLHRDEILDASQLPLSYVGLTPCFRAEAGSYGRDTKGLLRQHQFHKVELVKITTPEQSSAEHEALTQHAEECLKLLGLPYRKVRLCSGDIGFAATHCYDLEVWLPAQQTYREIASCSNCGDFQARRMGLRFRPAPMASATEEGKKGKKSTVLCHTINGSGLAVGRTLVAILENYQHEDGSVSIPEVLVPYMGGMARLEPVVKK 525 ++S ++L+L S RAFH S G + PL SA S + GR+ V M + RPSS GK LDV+LVT+EPDLV+AHL+AR AS+EQ SSV D+ L RRKELVKEQQGAL QRK LSAEIGKLM+EK++ EA KLK+QVEYA+SVA+TAEEQL LE+EM+ LM Q+PNLLDDRVP+G DE N VV EWG ++RK+GE +LWHDDIA+K+GGYDP+AAA+LSGARFS+LSGP+ARLERAI+QFFLD+HT NGYREVSVPYIVSRSTLTGTGQLPKFE DLFAVNHQVNGEDAFLIPTAEVPITNLHRDEIL+A+QLPLSYVGLTPCFRAEAGSYGRDTKGLLRQHQFHKVELVKITTPEQS AEHEALT+ AEECL+LL LPYRKVRLCSGDIGFAA HCYDLEVWLPAQQTYREIASCSNC DFQARRM LR+RPAP+ +A E G KGKKSTVLCHTINGSGLAVGRTLVAILENYQ EDGSV +PEVLVPYMGG +LEPV KK Sbjct: 10 RLSLTFVLATIMLLLAIRSLRAFHAKPQTSFGKIKNPLCRVSAPSSSYEQRGRRDVGLHGAVRMASGRPSSGGKTLDVKLVTEEPDLVLAHLEARRASDEQASSVSDIADLYLRRKELVKEQQGALTQRKSLSAEIGKLMREKQDAEAAKLKTQVEYANSVASTAEEQLHQLEREMDSLMLQMPNLLDDRVPDGDDELNNEVVLEWGVERRKVGERYLWHDDIAAKLGGYDPAAAARLSGARFSILSGPLARLERAIVQFFLDQHTAENGYREVSVPYIVSRSTLTGTGQLPKFEEDLFAVNHQVNGEDAFLIPTAEVPITNLHRDEILEATQLPLSYVGLTPCFRAEAGSYGRDTKGLLRQHQFHKVELVKITTPEQSDAEHEALTRDAEECLRLLELPYRKVRLCSGDIGFAAAHCYDLEVWLPAQQTYREIASCSNCRDFQARRMALRYRPAPLGAAKEAG-KGKKSTVLCHTINGSGLAVGRTLVAILENYQEEDGSVRLPEVLVPYMGGTTKLEPVAKK 532
BLAST of NO12G01920 vs. NCBI_GenBank
Match: CBN73852.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 535.8 bits (1379), Expect = 1.500e-148 Identity = 279/512 (54.49%), Postives = 356/512 (69.53%), Query Frame = 0 Query: 22 LVTPSARAFHVASL-----------GRRPLSDSSARYFSRHRFGRQHRQEGVSMMAERPSSAGKGLDVRLVTDEPDLVMAHLKARHASEEQMSSVDDVGSLNRRRKELVKEQQGALAQRKMLSAEIGKLMKEKKNEEATKLKSQVEYASSVAATAEEQLLDLEQEMELLMYQIPNLLDDRVPEGKDEEANVVVTEWGTDKRKIGEGFLWHDDIASKVGGYDPSAAAKLSGARFSVLSGPVARLERAIIQFFLDRHTDRNGYREVSVPYIVSRSTLTGTGQLPKFENDLFAVNHQVNGEDAFLIPTAEVPITNLHRDEILDASQLPLSYVGLTPCFRAEAGSYGRDTKGLLRQHQFHKVELVKITTPEQSSAEHEALTQHAEECLKLLGLPYRKVRLCSGDIGFAATHCYDLEVWLPAQQTYREIASCSNCGDFQARRMGLRFRPAPMASATEEGKKGKKSTVLCHTINGSGLAVGRTLVAILENYQHE-DGSVSIPEVLVPYMGGMARLEPV 522 ++TP AR VA+ G R + ++ + H + + R ++ LD L++ PDLV+ H+KAR E+ + +V +G L R+EL+ ++ AL QR +SA+IGKLMK + +EA + K++V+ + +A +AEE L +++ E+ L+ ++PNLLD RVP+G EE NVVV EWG + K GE +LWHD++A K+GG+DP AA++SGARFSVL GP+ARLERA+ Q+ LD HT +GY EVS+P +V+RS+L GTGQLPKFE DLF NH V ED+FLIPT EVP+TNL R ++LD +QLP+S V LTPCFRAEAGS GRDT+GLLRQHQF KVELVK TTPE S EHEALTQHAE LK L LP+R+V LCSGDIGF A CYDLEVW+P Q +REI+SCSNC DFQARRM LR+R T E KK K + CHTINGSG+AVGR LVA+LENY + DGSVSIP+VL PYMGG +LE V Sbjct: 1 MITPCARVMAVATFATTRCGSFLYGGARFARTGAKQFAALHSSAQVEQTTKDHESLSRSNADDASLDSVLISTNPDLVVDHMKARRMGEDSVEAVHRIGDLMDNRRELIMTKEDALKQRNAMSAQIGKLMKAGQAKEAEEKKNEVQSINKIAGSAEEDLNEVDSELNTLLMRLPNLLDSRVPDGDGEEENVVVAEWGQEYIKNGEEYLWHDEVAIKLGGWDPEGAARISGARFSVLKGPLARLERALGQWLLDVHTTEHGYTEVSLPLLVTRSSLEGTGQLPKFEEDLFKTNHLVANEDSFLIPTGEVPLTNLLRGQLLDKAQLPMSLVALTPCFRAEAGSAGRDTRGLLRQHQFLKVELVKFTTPEDSRNEHEALTQHAEAVLKALKLPFRRVSLCSGDIGFGARLCYDLEVWMPGQGAFREISSCSNCQDFQARRMNLRYR-----EPTPEAKKKKSRNLPCHTINGSGVAVGRALVAVLENYYNPIDGSVSIPDVLRPYMGGAEKLESV 507
BLAST of NO12G01920 vs. NCBI_GenBank
Match: XP_009037100.1 (hypothetical protein AURANDRAFT_26104 [Aureococcus anophagefferens] >EGB08382.1 hypothetical protein AURANDRAFT_26104 [Aureococcus anophagefferens]) HSP 1 Score: 516.9 bits (1330), Expect = 7.300e-143 Identity = 267/462 (57.79%), Postives = 332/462 (71.86%), Query Frame = 0 Query: 65 MAERPSSAGKGLDVRLVTDEPDLVMAHLKARHASEEQMSSVDDVGSLNRRRKELVKEQQGALAQRKMLSAEIGKLMKEKKNE-EATKLKSQVEYASSVAATAEEQLLDLEQEMELLMYQIPNLLDDRVPEGKDEEANVVVTEWGTDKRKIGE--GFLWHDDIASKVGGYDPSAAAKLSGARFSVLSGPVARLERAIIQFFLDRHTDRNGYREVSVPYIVSRSTLTGTGQLPKFENDLFAV-NHQVNGEDAFLIPTAEVPITNLHRDEILDASQLPLSYVGLTPCFRAEAGSYGRDTKGLLRQHQFHKVELVKITTPEQSSAEHEALTQHAEECLKLLGLPYRKVRLCSGDIGFAATHCYDLEVWLPAQQTYREIASCSNCGDFQARRMGLRFRPAPMASATEEGK--KGKKSTVLCHTINGSGLAVGRTLVAILENYQHEDGSVSIPEVLVPYMGGMARLEP 521 ++ RPS+AG L++R + D D V AH++AR SEE ++SVD + +L +R +E+ AL+ RK LS +IGK MK E + LK++V ++ VA AE + LE+E L +PNLLDD P+G E NVVV EWGTD RK+G+ +LWHDD+A+ +GG+D AA+K+SGARF+VL G VARLERA+ FFLD HTD GY EVS P IV+RS L GTGQLPKFE+DLF + NH+V GEDAFLIPTAEVP+TNL +IL+ S LP+ LT CFRAEAGSYGRDT+GL+RQHQF KVELVKI P+ AEHEAL AE+CL++L LPYRKV LC+GDIGF+A CYDLEVWLP Q YREI+SCS GD+QARRMGLRFRP P + GK GK + +T+NGSGLAVGR LVA+LEN+Q+ DGSV++P L PYMGG + P Sbjct: 30 VSTRPSAAGVSLELRTLKDHADTVKAHVRARQGSEETVASVDRMVALTEQRAAAQRERDAALSTRKALSGDIGKAMKTGAAEADVAALKAEVAASADVAEGAEATMAALEEEANALFAALPNLLDDATPDGAGETENVVVAEWGTDSRKLGDEGDYLWHDDLAAGLGGFDAEAASKVSGARFAVLRGGVARLERALGAFFLDMHTDGGGYEEVSSPVIVARSALEGTGQLPKFEDDLFKLDNHKVRGEDAFLIPTAEVPLTNLVAGDILEESDLPIRVAALTHCFRAEAGSYGRDTRGLVRQHQFAKVELVKIVAPDDGVAEHEALVADAEKCLQMLDLPYRKVSLCAGDIGFSARRCYDLEVWLPGPQEYREISSCSLMGDYQARRMGLRFRPKPAKDDNDGGKXXXGKPKPLFPYTMNGSGLAVGRALVAVLENHQNPDGSVTVPRALRPYMGGAESIIP 491
BLAST of NO12G01920 vs. NCBI_GenBank
Match: EJK56765.1 (hypothetical protein THAOC_23274 [Thalassiosira oceanica]) HSP 1 Score: 512.7 bits (1319), Expect = 1.400e-141 Identity = 263/472 (55.72%), Postives = 333/472 (70.55%), Query Frame = 0 Query: 70 SSAGKGLDVRLVTDEPDLVMAHLKARHASEEQMSSVDDVGSLNRRRKELVKEQQGALAQRKMLSAEIGKLMKEKKNEEATKLKSQVEYASSV---AATAEEQLLDLEQEMELLMYQIPNLLDDRVPEGKDEEANVVVTEWGTDKRKIGEGF--------LWHDDIASKVGGYDPSAAAKLSGARFSVLSGPVARLERAIIQFFLDRHTDRNGYREVSVPYIVSRSTLTGTGQLPKFENDLFAV---NHQVNGEDAFLIPTAEVPITNLHRDEILDASQLPLSYVGLTPCFRAEAGSYGRDTKGLLRQHQFHKVELVKITTPEQSSAEHEALTQHAEECLKLLGLPYRKVRLCSGDIGFAATHCYDLEVWLPAQQTYREIASCSNCGDFQARRMGLRFRPAPMASATEEGKKGKK------STVLCHTINGSGLAVGRTLVAILENYQHEDGSVSIPEVLVPYMGGMARLEPV 522 SS LD R +++ D+V++HLK+R AS E + S + SLN R L+K++ AL +R S ++GKLM+E K +E ++K AS A+ EE+L ++E + L+ +PNLLDD VP+G D+ AN +V+EWG D + E F LWHDD+A+ +GG+ AA +SGARF L+GPVARLERAI +FLDR +++ GY EVS P +VSRS L GT QLPKFE DLF + +H NGEDAFLIPTAEVP+TN+H +IL+ S LP+SY LTPCFRAEAGSYGRDT+GL+R HQF+KVE+VKITTPE S EH LT+HAEECL+ L +PYRK+RLCSGD+GF+A HCYDLE WLP+ + +REI+SCSN GDFQARRM LR+RP + K GKK V CHTINGSGLAVGRTLVA+LENYQ DG V +PEVL PYMGG+A L+ + Sbjct: 67 SSVPNSLDARSLSENLDVVISHLKSRRASNEAIESAKSIASLNFDRVALIKKRDDALQKRNEYSGQVGKLMRESKGQETDEIKGIKNLASQAGGDASKVEEELSEIESNVNSLLASLPNLLDDVVPDGDDDSANELVSEWG-DVNALPEEFGWPSDFEPLWHDDVATNLGGWSSEAAVGMSGARFVSLTGPVARLERAISSYFLDRASEK-GYTEVSPPLVVSRSALEGTSQLPKFEEDLFKIIPESHTCNGEDAFLIPTAEVPLTNMHTGQILEESDLPISYCALTPCFRAEAGSYGRDTRGLIRTHQFYKVEMVKITTPETSDDEHHKLTRHAEECLEELRIPYRKMRLCSGDVGFSAQHCYDLEAWLPSTKEFREISSCSNTGDFQARRMALRYRPEVQVDDNQTNKSGKKKKAKKPKPVFCHTINGSGLAVGRTLVAVLENYQTPDGDVVVPEVLRPYMGGVAILKRI 536
BLAST of NO12G01920 vs. NCBI_GenBank
Match: KOO31716.1 (seryl-tRNA synthetase [Chrysochromulina sp. CCMP291]) HSP 1 Score: 509.6 bits (1311), Expect = 1.200e-140 Identity = 262/457 (57.33%), Postives = 322/457 (70.46%), Query Frame = 0 Query: 65 MAERPSSAGKGLDVRLVTDEPDLVMAHLKARHASEEQMSSVDDVGSLNRRRKELVKEQQGALAQRKMLSAEIGKLMKEKKNEEATKLKSQVEYASSVAATAEEQLLDLEQEMELLMYQIPNLLDDRVPEGKDEEANVVVTEWGTDKRKIGEGFLWHDDIASKVGGYDPSAAAKLSGARFSVLSGPVARLERAIIQFFLDRHTDRNGYREVSVPYIVSRSTLTGTGQLPKFENDLFAVNHQVNGEDAFLIPTAEVPITNLHRDEILDASQLPLSYVGLTPCFRAEAGSYGRDTKGLLRQHQFHKVELVKITTPEQSSAEHEALTQHAEECLKLLGLPYRKVRLCSGDIGFAATHCYDLEVWLPAQQTYREIASCSNCGDFQARRMGLRFRPAPMASATEEGKKGK-KSTVLCHTINGSGLAVGRTLVAILENYQHEDGSVSIPEVLVPYMGGMARLEP 521 M +S+ LD RL+ DEP+L+ L+ R A E + +VD +G L + R V E A RK LS +IG L+K + EA KLK++V +++ A A+ +L + E L ++PNLLD+RV +G D+ AN+ V W D + G+ LWHD+ +++GG D AAKLSGARFSVL G VARLERA+I FFLD HT ++GY E+ VPYIV L GTGQLPKFE DLF ++ +NG +LIPTAEVPITNLH EIL+ QLPLSY TPCFRAEAGS+GRDT+GL+RQHQFHKVELVK+TTPE S AEH L HAE CL+ L LPYRK++LCSGDIGF+A CYDLEVWLP Q +REI+SCSNCGDFQARRM LR+RP +E GK K CHTINGSGLAVGRTLVA+LENYQ++DGS++IPEVL PYMGG + P Sbjct: 34 MQAATASSSPTLDERLIADEPELIKKTLRMRRADESMLQAVDRIGELTKLRAAAVAEGNDAREVRKKLSPKIGALVKNGETVEAEKLKAEVAQSATEADAADAKLEVFDAERTSLFNKLPNLLDERVVDGADDNANIEVFRWRCDDLRTGK--LWHDEFGTQLGGIDMDGAAKLSGARFSVLKGGVARLERALINFFLDFHTGQHGYTELCVPYIVGGEALYGTGQLPKFEEDLFKLSAPINGRTGYLIPTAEVPITNLHAGEILEEVQLPLSYCAFTPCFRAEAGSHGRDTRGLVRQHQFHKVELVKLTTPEASDAEHHKLVGHAEACLQALELPYRKMQLCSGDIGFSAKLCYDLEVWLPGQGKFREISSCSNCGDFQARRMNLRYRP------SERDANGKQKKPRFCHTINGSGLAVGRTLVALLENYQNDDGSLTIPEVLRPYMGGQTTILP 482
BLAST of NO12G01920 vs. NCBI_GenBank
Match: CEL98192.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 492.3 bits (1266), Expect = 1.900e-135 Identity = 255/465 (54.84%), Postives = 325/465 (69.89%), Query Frame = 0 Query: 69 PSSAGKGLDVRLVTDEPDLVMAHLKARHASEEQ--MSSVDDVGSLNRRRKELVKEQQGALAQRKMLSAEIGKLMKEKKNEEATKLKSQVEYASSVAATAEEQLLDLEQEMELLMYQIPNLLDDRVPEGKDEEANVVVTEWGTD-----KRKIGEG-FLWHDDIASKVGGYDPSAAAKLSGARFSVLSGPVARLERAIIQFFLDRHTDRNGYREVSVPYIVSRSTLTGTGQLPKFENDLFAVN--HQVNGEDAFLIPTAEVPITNLHRDEILDASQLPLSYVGLTPCFRAEAGSYGRDTKGLLRQHQFHKVELVKITTPEQSSAEHEALTQHAEECLKLLGLPYRKVRLCSGDIGFAATHCYDLEVWLPAQQTYREIASCSNCGDFQARRMGLRFRPAPMASATEEGKKGKKSTVLCHTINGSGLAVGRTLVAILENYQHEDGS-----VSIPEVLVPYMGGMARL 519 P +D+RLV +PD V L+ R S++ M SVD++G+L+ R L+ E A ++R LS EIG L ++ K +EA +K+QVE A+ AA A+ +L ++ E++ ++ +PN LD+ VPEG DE N VVTEW D + +G+G ++WHD+IA+++G + AA+LSG+RF+V SG +AR+ERA+ Q +D HT +GY E VPY+VS L GTGQLPKF DLF ++ H +NG+ +LIPTAEVP+TN+HR+ ILD S LP SYV LTPCFRAEAGSYG+DTKGL RQH FHKVELVKI TP+ S +HEA+T+HAE L+LLGLPYRKVRLC GDIGF+A HCYDLEVWLP+QQ YREI+S SNC DFQARRM LR+RP A E GKK K LCHTINGSG+AVGR L+A+LEN+Q D S V IPE L YM G L Sbjct: 20 PEGGFLSVDLRLVALQPDTVRELLRRRGESDDSDAMQSVDEIGALSVDRSRLISEGDAARSERNTLSQEIGSLYRQGKADEAESIKAQVESATERAAAADAELSRVDAEIQTMLLSLPNALDELVPEGADESDNEVVTEWTPDDPRVKDKMVGDGEYMWHDEIAARLGCWKADQAAQLSGSRFAVYSGGIARMERALGQLMMDVHTQEHGYEEHVVPYLVSEECLVGTGQLPKFTEDLFTLDERHSLNGQRGYLIPTAEVPLTNVHRESILDESDLPKSYVALTPCFRAEAGSYGKDTKGLFRQHVFHKVELVKICTPDTSRQQHEAMTRHAEHILRLLGLPYRKVRLCGGDIGFSAAHCYDLEVWLPSQQRYREISSISNCWDFQARRMALRYRP----KAPEGGKKKKTKPTLCHTINGSGVAVGRCLIAVLENFQRIDESTGKLVVDIPEALQVYMKGKVSL 480
BLAST of NO12G01920 vs. NCBI_GenBank
Match: GAX20495.1 (seryl-tRNA synthetase [Fistulifera solaris]) HSP 1 Score: 487.6 bits (1254), Expect = 4.700e-134 Identity = 264/463 (57.02%), Postives = 317/463 (68.47%), Query Frame = 0 Query: 68 RPSSAGKGLDVRLVTDEPDLVMAHLKARHASEEQMSSVDDVGSLNRRRKELVKEQQGALAQRKMLSAEIGKLM-KEKKNEEATKLKSQVEYASSVAATAEEQLLDLEQEMELLMYQ----IPNLLDDRVPEGKDEEANVVVTEWG---TDKRKIG--EGF--LWHDDIASKVGGYDPSAAAKLSGARFSVLSGPVARLERAIIQFFLDRHTDRNGYREVSVPYIVSRSTLTGTGQLPKFENDLFAV---NHQVNGEDAFLIPTAEVPITNLHRDEILDASQLPLSYVGLTPCFRAEAGSYGRDTKGLLRQHQFHKVELVKITTPEQSSAEHEALTQHAEECLKLLGLPYRKVRLCSGDIGFAATHCYDLEVWLPAQQTYREIASCSNCGDFQARRMGLRFRPAPMASATEEGKKGKKSTV-LCHTINGSGLAVGRTLVAILENYQHEDGSVSIPEVLVPYMGG 515 R S L+++ +T+E D V++HLKAR AS E + + D+ +L +R L++E+ L QRK SA +G LM K + +EE K IPNLLDD+VP+G ++ N VV+ WG R++G E F LWHDD+AS + GY AA ++SGARF LSG VA+LERA+ FF+D HT ++GY EVSVPY+V RS L GT QLPKF+ DLFA+ +H NGEDAFLIPTAEVP+TN+HR+E+L+ S LPLSYV TPCFRAEAGSYGRDTKGL+R HQF KVELVKIT+ + S EHE LT AE CL+ L LPYRKVRLCSGDIGFAA HCYDLEVWL + YREI+SCSN GDFQARRM LR+RP A A +GKK KK + LCHTINGSGLAVGRTLVAILENYQ DGSV +PEVL PYMGG Sbjct: 42 RVSRKDLSLELKTITNELDTVLSHLKARRASAETLQAAQDIAALASKRSNLIQERDSFLNQRKEASATVGMLMRKNELSEEEQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIPNLLDDKVPDGDNDSNNEVVSTWGDIDALPRELGWTEEFEPLWHDDVASGLKGYKSEAAVRISGARFVALSGAVAQLERALAMFFVDLHTTKHGYTEVSVPYVVGRSALEGTSQLPKFQEDLFAITPESHTCNGEDAFLIPTAEVPVTNMHREEVLEESDLPLSYVSFTPCFRAEAGSYGRDTKGLIRTHQFLKVELVKITSADTSDEEHELLTSQAEACLQALKLPYRKVRLCSGDIGFAARHCYDLEVWLAGAKEYREISSCSNTGDFQARRMSLRYRPKSEAGA--DGKKPKKEKLKLCHTINGSGLAVGRTLVAILENYQKPDGSVVVPEVLRPYMGG 502
BLAST of NO12G01920 vs. NCBI_GenBank
Match: XP_005780726.1 (serine-tRNA ligase [Emiliania huxleyi CCMP1516] >EOD28297.1 serine-tRNA ligase [Emiliania huxleyi CCMP1516]) HSP 1 Score: 480.3 bits (1235), Expect = 7.500e-132 Identity = 257/473 (54.33%), Postives = 320/473 (67.65%), Query Frame = 0 Query: 65 MAERPSSAGKGLDVRLVTDEPDLVMAHLKARHASEEQMSSVDDVGSLNRRRKELVKEQQGALAQRKMLSAEIGKLMKEKKNEEATKLKSQVEYASSVAATAEEQLLDLEQEMELLMYQIPNLLDDRVPEGKDEEANVVVTEWGTD-KRKIGEGFLWHDDIASKVGGYD------PSAAAKLSGARFSVLSGPVARLERAIIQFFLDRHTD---------------RNGYREVSVPYIVSRSTLTGTGQLPKFENDLFAVNHQVNGEDAFLIPTAEVPITNLHRDEILDASQLPLSYVGLTPCFRAEAGSYGRDTKGLLRQHQFHKVELVKITTPEQSSAEHEALTQHAEECLKLLGLPYRKVRLCSGDIGFAATHCYDLEVWLPAQQTYREIASCSNCGDFQARRMGLRFRPAPMASATEEGKKGKKSTVLCHTINGSGLAVGRTLVAILENYQHEDGSVSIPEVLVPYMGGM 516 MA S+A LD RLV DEP +V++ L+ R ASEE +++VD +G L R+R LV+E A A+RK LS +IG L+K A LK V AS VA A+ ++ ++E E L +PNLLD R P+G DEEANV+++EW D ++ +G WHD++A+ +GG D AAAKLSG+RF+VL G VAR+ERA+ FLD HT +GY E SVP +V L GTGQLPKF+ DL + + + + P +VP+TNLH EILD + LP+SYVG TPCFRAEAGS GRDT+GL RQHQF KVELVKI TPEQS A+H+AL +HAE CL+ L LPYRKV LC+GDIGF+A CYDLEVWLP Q YREI+SCSNCG FQARRMGLR+RPAP +G K+ CHT+NGSGLAVGR LVA+LENYQ+ DGSV++PE L PYMGG+ Sbjct: 1 MAVVESAATVTLDERLVADEPSVVVSSLQRRRASEEVIAAVDRIGELTRQRAALVEEGNAARAERKALSPKIGTLLKAGDEAGAAALKEDVAKASEVAGAADAKVEEVEAERGRLFATLPNLLDSRTPDGADEEANVILSEWAPDGYGELRDGLTWHDELATALGGLDLEAAPPAQAAAKLSGSRFAVLRGGVARMERALASLFLDLHTGERDNHHHPPGTCETREHGYVETSVPLLVGAEALQGTGQLPKFQEDLASTS--LPFPEPSGSPPPQVPLTNLHAGEILDEAALPISYVGATPCFRAEAGSAGRDTRGLFRQHQFLKVELVKICTPEQSDAQHQALVEHAERCLRALQLPYRKVLLCAGDIGFSARLCYDLEVWLPGQGRYREISSCSNCGSFQARRMGLRYRPAP------DGSGKKRKPEFCHTLNGSGLAVGRALVAVLENYQNADGSVTVPEALRPYMGGL 465
BLAST of NO12G01920 vs. NCBI_GenBank
Match: GAX13511.1 (seryl-tRNA synthetase [Fistulifera solaris]) HSP 1 Score: 479.2 bits (1232), Expect = 1.700e-131 Identity = 254/403 (63.03%), Postives = 301/403 (74.69%), Query Frame = 0 Query: 128 QRKMLSAEIGKLMKEKK--NEEATKLKSQVE---YASSVAATAEEQLLDLEQEMELLMYQIPNLLDDRVPEGKDEEANVVVTEWGTDK---RKIG--EGF--LWHDDIASKVGGYDPSAAAKLSGARFSVLSGPVARLERAIIQFFLDRHTDRNGYREVSVPYIVSRSTLTGTGQLPKFENDLFAV---NHQVNGEDAFLIPTAEVPITNLHRDEILDASQLPLSYVGLTPCFRAEAGSYGRDTKGLLRQHQFHKVELVKITTPEQSSAEHEALTQHAEECLKLLGLPYRKVRLCSGDIGFAATHCYDLEVWLPAQQTYREIASCSNCGDFQARRMGLRFRPAPMASATEEGKKGKKSTV-LCHTINGSGLAVGRTLVAILENYQHEDGSVSIPEVLVPYMGG 515 QRK SA +G LM++K+ EE +L+ E AS A AE QL +L+ +M+ L+ IPNLLDD+VP+G ++ N VV+ WG +++G E F LWHDD+AS + GY AA ++SGARF LSG VA+LERA+ FF+D HT ++GY EVSVPY+V RS L GT QLPKF+ DLFA+ +H NGEDAFLIPTAEVP+TN+HR+E+L+ S LPLSYV TPCFRAEAGSYGRDTKGL+R HQF KVELVKIT+ + S EHE LT HAE CL+ L LPYRKVRLCSGDIGFAA HCYDLEVWL + YREI+SCSN GDFQARRM LR+R P + A EGKK KK + LCHTINGSGLAVGRTLVAILENYQ DGSV +PEVL PYMGG Sbjct: 93 QRKEASATVGSLMRKKELSEEEQKQLEEAKENSTKASDGATAAETQLEELQAKMDGLLSGIPNLLDDKVPDGDNDSNNEVVSTWGDINALPKELGWREDFEPLWHDDVASGLKGYKSEAAVRISGARFVALSGAVAQLERALAMFFVDLHTTKHGYTEVSVPYVVGRSALEGTSQLPKFQEDLFAITPESHTCNGEDAFLIPTAEVPVTNMHREEVLEESDLPLSYVSFTPCFRAEAGSYGRDTKGLIRTHQFLKVELVKITSADTSDEEHELLTSHAEACLQALKLPYRKVRLCSGDIGFAARHCYDLEVWLAGAKEYREISSCSNTGDFQARRMSLRYR--PKSEAGVEGKKPKKEKLKLCHTINGSGLAVGRTLVAILENYQKPDGSVVVPEVLRPYMGG 493
BLAST of NO12G01920 vs. NCBI_GenBank
Match: XP_002183462.1 (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >EEC45162.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 478.0 bits (1229), Expect = 3.700e-131 Identity = 251/439 (57.18%), Postives = 306/439 (69.70%), Query Frame = 0 Query: 93 KARHASEEQMSSVDDVGSLNRRRKELVKEQQGALAQRKMLSAEIGKLMKEKKNEEATK------LKSQVEYASSVAATAEEQLLDLEQEMELLMYQIPNLLDDRVPEGKDEEANVVVTEWGTDKRKI------GEGF--LWHDDIASKVGGYDPSAAAKLSGARFSVLSGPVARLERAIIQFFLDRHTDRNGYREVSVPYIVSRSTLTGTGQLPKFENDLFAV---NHQVNGEDAFLIPTAEVPITNLHRDEILDASQLPLSYVGLTPCFRAEAGSYGRDTKGLLRQHQFHKVELVKITTPEQSSAEHEALTQHAEECLKLLGLPYRKVRLCSGDIGFAATHCYDLEVWLPAQQTYREIASCSNCGDFQARRMGLRFRPAPMASATEEGKKGKKSTVLCHTINGSGLAVGRTLVAILENYQHEDGSVSIPEVLVPYMGG 515 +AR AS + + + + +L+ R +L++E+ G L QRK SA +GKLM+ K N ++++ E L +++ M+ L+ IPNLLDD+VP G+DE N V+ WG DK + + F LWHDD+AS + GY AA K+SGARF LSG +A+LERAI F +D HT ++GY EVSVP++V RS L GT QLPKF+ DLFA+ +H NGEDAFLIPTAEVP+TN+HR ++L+ S LPLSYV TPCFRAEAGSYGRDTKGL+R HQF KVELVKITT + S AEHE LT HAE L+ L LPYRKVRLCSGDIGF+A HCYDLEVWLP +REI+SCSN GDFQARRM LR+RP P +G K VLCHTINGSGLAVGRTLVA+LENYQ DGSV +PEVL PYMGG Sbjct: 1 QARSASSDTSEAAEQIANLSEDRVKLIQERDGFLNQRKEASAVVGKLMRNKDNLDSSQXXXXXXXXXXXXXXXXXXXXXEAALEEIQTTMDRLLAGIPNLLDDQVPFGRDESENEEVSRWG-DKDALPARLEWDDSFQPLWHDDVASNLNGYQVEAAVKMSGARFVALSGSIAQLERAIAMFCIDLHTTQHGYTEVSVPFVVGRSALEGTSQLPKFQEDLFAITPESHTCNGEDAFLIPTAEVPVTNMHRGQVLEESDLPLSYVAWTPCFRAEAGSYGRDTKGLIRTHQFQKVELVKITTADTSDAEHETLTAHAEAVLRSLELPYRKVRLCSGDIGFSARHCYDLEVWLPGAGEFREISSCSNTGDFQARRMSLRYRPKP-----ADGSNKKLKPVLCHTINGSGLAVGRTLVAVLENYQTPDGSVVVPEVLRPYMGG 433 The following BLAST results are available for this feature:
BLAST of NO12G01920 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO12G01920 ID=NO12G01920|Name=NO12G01920|organism=Nannochloropsis oceanica|type=gene|length=1834bpback to top protein sequence of NO12G01920.1 >NO12G01920.1-protein ID=NO12G01920.1-protein|Name=NO12G01920.1|organism=Nannochloropsis oceanica|type=polypeptide|length=530bpback to top Synonyms
Publications
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