NO12G01830, NO12G01830 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO12G01830 vs. NCBI_GenBank
Match: XP_005856125.1 (hypothetical protein NGA_0334500 [Nannochloropsis gaditana CCMP526] >EKU20261.1 hypothetical protein NGA_0334500 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 451.4 bits (1160), Expect = 3.800e-123 Identity = 269/547 (49.18%), Postives = 348/547 (63.62%), Query Frame = 0 Query: 1 MVDNTGAKPESPTSIWTSRIPKEWALLDEKLEVGSIPSGSRISVLSKTLDQERGVCKCTFQVVPRVAERE----EEEGELFLAEESGVVLEIDASSRAA---GTGV----AYPFVPPTLKVVRGAELWPSEIVRSEDQTMILPLLAAWTPKLGLADLMLAAAEALQAHAEAHAEGNYDESTTFEPGDALSLKTFGDRLFRGTMAQQGGPVLQRYLGVTDSWLLNAKAHETKLETVFVIKAQPLRQVSKLKYKREMSISIEFRDGDRWTFAMPRAAECVEAIQASLREKGVVGRRTSQAALDHVARAKACLEEAQLREAALLECGARSMEKVQGVCDLYKHAIEKFATVSTDENKQKTTEAIFLLQSFLSRPEVQEVLTNNSRSPAVCAASTGRRVASLPTLPKVKFNPFTSQPKTKKGEVLPRSASAGMVSGDDDGLAREEKMLDPLSNRLKELLDLNLNNAVAAEGDGRDRGDSTSSLSASGCKGR------NRGGYVDTEGGSMDAVMSELDTVLGQAEKELENLNSPRARRPMARTAAGEAEEE 531 M D++ P SPTSIW+SR+P+E A L+EKL G+ R++VLSKTLD + GVCKCT + R + + +E+ L L E GV+LE+DASSR A GTGV AYPFVPP + V++G +L P+ V + +T++L L AWTPK+GLADL+LAAAEA+Q AH E E+ +EP L ++ GDRLF G++ QQGG +L RYL VT++W+LN KAHE KL +V V+KA+P + KL+YK+ SIS+EFRDGDRW AM RA ECVEAIQ +LR +GVVG RTSQAAL+HVARA+A L+EAQ RE A E G ++ +V+ VCDLYK A E+F + S++E+ +T EA+ LQSFLSRPEVQ++L A A+ TG P + + S P +KGEVL SA A M SG+DDGL+REE+ L PLS RLK +LDLNL A D DSTSS S +G R G GG +DA + ELD LG+A +E E L SP + + G EEE Sbjct: 1 MTDSSDPAPVSPTSIWSSRMPRELASLEEKLRRGTSTRTCRVTVLSKTLDNDNGVCKCTVMLNRRDEQADDRGPDEDEPLDLGETGGVLLEVDASSRPATGEGTGVSGATAYPFVPPIINVIQGIDLLPAAYVGEDGRTLLLAALRAWTPKVGLADLVLAAAEAVQGFEGAHDED--PETRGYEPNHVLDVRHLGDRLFPGSVPQQGGDMLPRYLVVTEAWVLNVKAHEAKLGSVVVVKARPQAHIGKLRYKQGCSISVEFRDGDRWLLAMSRAQECVEAIQEALRARGVVGFRTSQAALNHVARAQAYLQEAQXREEAAEEGGHWTLAQVRSVCDLYKQATERFGSFSSEESIARTGEAVGRLQSFLSRPEVQDLL-------ARTASPTGAEPPDSDESPDPEGSGTLSSPPARKGEVLAGSAVADMASGEDDGLSREERRLAPLSERLKHMLDLNLRKPAADARDRLPSLDSTSSSSGTGGNSRTGAAVAGEGPAPMRRGGGVDAELHELDEALGEASREWEGLRSPGPVQTLEEPLTGSEEEE 538
BLAST of NO12G01830 vs. NCBI_GenBank
Match: EWM25791.1 (hypothetical protein Naga_100021g1, partial [Nannochloropsis gaditana]) HSP 1 Score: 377.5 bits (968), Expect = 7.000e-101 Identity = 216/428 (50.47%), Postives = 284/428 (66.36%), Query Frame = 0 Query: 1 MVDNTGAKPESPTSIWTSRIPKEWALLDEKLEVGSIPSGSRISVLSKTLDQERGVCKCTFQVVPRVAERE----EEEGELFLAEESGVVLEIDASSRAA---GTGV----AYPFVPPTLKVVRGAELWPSEIVRSEDQTMILPLLAAWTPKLGLADLMLAAAEALQAHAEAHAEGNYDESTTFEPGDALSLKTFGDRLFRGTMAQQGGPVLQRYLGVTDSWLLNAKAHETKLETVFVIKAQPLRQVSKLKYKREMSISIEFRDGDRWTFAMPRAAECVEAIQASLREKGVVGRRTSQAALDHVARAKACLEEAQLREAALLECGARSMEKVQGVCDLYKHAIEKFATVSTDENKQKTTEAIFLLQSFLSRPEVQEVLTNNSRSPAVCAASTGRRVASLPTLPKVKFNPFTSQPKTKKGEVLPRSASAG 418 M D++ P SPTSIW+SR+P+E A L+EKL G+ R++VLSKTLD + GVCKCT + R + + +E+ L L E GV+LE+DASSR A GTGV AYPFVPP + V++G +L P+ V + +T++L L AWTPK+GLADL+LAAAEA+Q AH E E+ +EP L ++ GDRLF G++ QQGG +L RYL VT++W+LN KAHE KL +V V+KA+P + KL+YK+ SIS+EFRDGDRW AM RA ECVEAIQ +LR +GVVG RTSQAAL+HVARA+A L+EAQ RE A E G ++ +V+ VCDLYK A E+F +VS++E+ +T EA+ LQSFLSRPEVQ++L A A+ TG P + + S P +KGEV R G Sbjct: 1 MTDSSDPAPVSPTSIWSSRMPRELASLEEKLRRGTSTRTCRVTVLSKTLDNDNGVCKCTVMLNRRDEQADDRGPDEDEPLDLGETGGVLLEVDASSRPATGEGTGVSGATAYPFVPPIINVIQGIDLLPAAYVGEDGRTLLLAALRAWTPKVGLADLVLAAAEAVQGFEGAHDED--PETRGYEPNHVLDVRHLGDRLFPGSVPQQGGDMLPRYLVVTEAWVLNVKAHEAKLGSVVVVKARPQAHIGKLRYKQGCSISVEFRDGDRWLLAMSRAQECVEAIQEALRARGVVGFRTSQAALNHVARAQAYLQEAQRREEAAEEGGHWTLAQVRSVCDLYKQATERFGSVSSEESIARTGEAVGRLQSFLSRPEVQDLL-------ARTASPTGAEPPDSDESPDPEGSGTLSSPPARKGEVFGRVGRRG 419
BLAST of NO12G01830 vs. NCBI_GenBank
Match: CBN76043.1 (conserved unknown protein (Partial), partial [Ectocarpus siliculosus]) HSP 1 Score: 100.1 bits (248), Expect = 2.100e-17 Identity = 81/289 (28.03%), Postives = 132/289 (45.67%), Query Frame = 0 Query: 96 GTGVAYPFVPPTLKVVRGAELWPSEIVRSEDQTMILPLLAAWTPK-------LGLADLMLAAAEALQAHAEAHAEGNYDESTTFEPG-----DALSLKTF-----GDRLFRGTMAQQGG-PVLQRYLGVTDSWLLNAKAHETKLETVFVIKAQPLRQVSKLKYKREMSISIEFRDGDRWTFAMPRAAECVEAIQASLREKGVVGRRTSQAALDHVARAKACLEEAQLREAALLECGARSMEKVQGVCDLYKHAIEKFATVSTDENKQKTTEAIFLLQSFLSRPEVQEVL 367 G YPF P ++V+ G ++ P+ I+ S D + LP AWTP +AD++L A EA + + E PG +ALS F LF G++ G L RY+GVTD LL +AH T++ V+ A PL + KLK++R S+++ + + F P++ ECV+A+ L + G+ G +T+ A V A + + +EA + V+ DL++ A E ++ ++ E + + FL R +V L Sbjct: 155 GLDTRYPFECPVIRVLEGDDVMPTSIL-SGDGLLSLPGSDAWTPSSTIVNTLQDIADMVLHAKEAGLPTGQGGDDAGALERGELRPGALVGTEALSGCLFPCSPPAAPLFSGSVLAPGSRRPLDRYVGVTDRQLLELEAHRTRMNKTVVVLAIPLSNLKKLKFRRGASVTVILKTDEAKEFLTPQSYECVQAVTERLEKMGIAGHQTTAGAERQVDHASSLMAALGRKEAQFGVRERPDLTLVEECMDLFRQAAELYSAADDPRHE----EVLAHMHRFLQREDVLSAL 438
BLAST of NO12G01830 vs. NCBI_GenBank
Match: GAX13260.1 (hypothetical protein FisN_17Hh197 [Fistulifera solaris]) HSP 1 Score: 75.9 bits (185), Expect = 4.300e-10 Identity = 80/322 (24.84%), Postives = 152/322 (47.20%), Query Frame = 0 Query: 201 QRYLGVTDSWLLNAKAHETKLETVFVIKAQPLRQVSKLKYKREMSISIEFRDG--DRWTFAMPRAAECVEAIQASLREKGVVGRRTSQAALDHVARAKACLEEAQLREAALLECGARSMEKVQGVCDLYKHAIEKFATVSTDENKQKTTEAIFLLQSFLSRPEVQEVL------TNNSRSPAVCAASTGRRVASLPTLPKVKFNPFTSQPKTKKGEVLPRSASAGMVSGDDDGLAREEKMLDPLSNRLKELLDLNLNNAVAAEGDGRDR----GDSTSSLSASGCKGRNRGGYVDTEGGSMDAVMSELDTVLGQAEKELENL 511 + +L +TD+ ++ KA + + V P+ ++KLK++R+ S+S+ F+ + + P +A+ V IQ+ L++ GV G+ T+ AA + A ++E Q +E AL ++ +V + DLY+ A E+F ++ E + ++ FL+ P +L + N SP+ + +P +GEVL RSA + S D D ARE++ L KE + N++N + +G ++ GD ++ +AS + ++ +++ V+S LD ++ +A+KEL L Sbjct: 289 ETFLMITDTHIIELKASKLQTTNGTVTFCIPIDMLAKLKFRRQESLSLFFKPALDEPLIYMCPDSADAVHQIQSVLKDHGVRGKHTNAAAYRAINEAMQLVQEIQTKELALKH--DPTVNRVNEIMDLYRQAAERFEAAGDLRHE----EVVIHMRKFLALPLTVSILDGSFKRSENQESPS--------KTGEIP-----------------EGEVLERSALL-LASDDTDPNAREKEKLSD-----KE-FERNVDNLLKEVKEGFEQFKVDGDCSTDATAS----------LGSDDMTLEDVVSGLDAMMREADKELMEL 562
BLAST of NO12G01830 vs. NCBI_GenBank
Match: GAX11894.1 (hypothetical protein FisN_17Lh197 [Fistulifera solaris]) HSP 1 Score: 72.8 bits (177), Expect = 3.700e-9 Identity = 81/324 (25.00%), Postives = 150/324 (46.30%), Query Frame = 0 Query: 201 QRYLGVTDSWLLNAKAHETKLETVFVIKAQPLRQVSKLKYKREMSISIEFRDG--DRWTFAMPRAAECVEAIQASLREKGVVGRRTSQAALDHVARAKACLEEAQLREAALLECGARSMEKVQGVCDLYKHAIEKFATVSTDENKQKTTEAIFLLQSFLSRPEVQEVL------TNNSRSPAVCAASTGRRVASLPTLPKVKFNPFTSQPKTKKGEVLPRSASAGMVSGDDDGLARE-EKMLDP-----LSNRLKELLDLNLNNAVAAEGDGRDRGDSTSSLSASGCKGRNRGGYVDTEGGSMDAVMSELDTVLGQAEKELENL 511 + +L +T++ ++ KA + + V P+ ++KLK++R+ S+S+ F+ + + P +A+ V IQ+ L++ GV G+ T+ AA + A ++E Q +E AL ++ +V + DLY+ A E+F ++ E + ++ FL+ P +L + N SP+ + +P +GEVL R+A + S D D ARE EK+ D + N LKE+ + + + DG D+T+SL ++ +++ V+S LD ++ +A+KEL L Sbjct: 289 ETFLMITETHIIELKASKLQTTNGTVTFCIPIDMLAKLKFRRQESLSLFFKPALDEPLIYMCPDSADAVHQIQSVLKDHGVRGKHTNAAAYRAINEAMQLVQEIQTKELALKH--DPTVNRVNEIMDLYRQAAERFEAAGDLRHE----EVVIHMRKFLALPLTVSILDGSFKRSENQESPS--------KTGEIP-----------------EGEVLERNAFL-LASDDTDPNAREKEKLSDKEFERNVDNLLKEVKE----DFEQFKVDGDCSTDATASLG--------------SDDMTLEDVVSGLDAMMREADKELMEL 562
BLAST of NO12G01830 vs. NCBI_GenBank
Match: XP_002186093.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >ACI65563.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 69.3 bits (168), Expect = 4.100e-8 Identity = 79/330 (23.94%), Postives = 149/330 (45.15%), Query Frame = 0 Query: 187 LFRGTMAQQGGPVLQRYLGVTDSWLLNAKAHETKLETVFVIKAQPLRQVSKLKYKREMSISIEFRDG--DRWTFAMPRAAECVEAIQASLREKGVVGRRTSQAALDHVARAKACLEEAQLREAALLECGARSMEKVQGVCDLYKHAIEKFATVSTDENKQKTTEAIFLLQSFLSRPEVQEVLTNNSRSPAVCAASTGRRVASLPTLPKVKFNPFTSQPKTKKGEVLPRSASAGMVSGDDD----GLAREEKMLDPLSNRLKELLDLNLNNAVAAEGDGRDRGDSTSSLSASGCKGRNRGGYVDTEGGSMDAVMSELDTVLGQAEKELENL 511 +FR + + +L +T++ ++ KA + T + A P+ ++KLK++R+ S+S+ F+ D + P + + V IQ+ L+ GV G+ T+ AA + A + +++ Q +E AL ++++V + DLY+ A E+F +++ T ++ FL+ P +L + + TG P + K +GEVL R+ + DDD G +EK D +E +D NL A+ + G +S++ + + VD G + V ++LD ++ +A+KEL L Sbjct: 274 MFRSFTQSARSVLEESFLMITNTHIIEVKASRINISTGKITLAIPIELMAKLKFRRQESVSLFFKPAPDDPLIYMCPDSGDVVHQIQSVLKRHGVKGKHTNAAAHRAINEALSLVQDIQTKELALKH--DPTVDRVNDIMDLYRQAAERFEVAGDIRHEEVVTH----MRKFLALPLTISILDGSFQ-----RLDTG--------------TPKSPVGKIPEGEVLERTPAQ---LDDDDLDVPGSTEKEKQSD---KAFEENID-NLLKEAQADVENFRTGIESSNIDDALSE-------VDESG--LSDVAADLDAMMKEADKELTAL 562
BLAST of NO12G01830 vs. NCBI_GenBank
Match: OEU21747.1 (hypothetical protein FRACYDRAFT_223152 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 65.5 bits (158), Expect = 5.900e-7 Identity = 47/166 (28.31%), Postives = 86/166 (51.81%), Query Frame = 0 Query: 211 LLNAKAHETKLETVFVIKAQPLRQVSKLKYKREMSISIEFRDG--DRWTFAMPRAAECVEAIQASLREKGVVGRRTSQAALDHVARAKACLEEAQLREAALLECGARSMEKVQGVCDLYKHAIEKFATVSTDENKQKTTEAIFLLQSFLSRPEVQEVLTNNSRSPA 375 ++ ++++ L T V A P+ ++KLK++R+ S+S+ F+ + + P +A+CV IQA L+ GV G+ T+ A + +A ++E Q +E AL S+++V + DLY+ A E F +++ T ++ FL+ P VL + PA Sbjct: 413 IIEMRSNKLNLSTGTVTFAIPIEIMAKLKFRRQESVSLFFKPAPDEPLIYMCPDSADCVHQIQAVLKRHGVKGKHTNAATHRAINQALQFVQEIQTKELALKH--DPSIDRVNEIMDLYRQAAECFEKAGDVRHEEVVTH----MRKFLALPLTVSVLDGSYTIPA 572 The following BLAST results are available for this feature:
BLAST of NO12G01830 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 7
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO12G01830 ID=NO12G01830|Name=NO12G01830|organism=Nannochloropsis oceanica|type=gene|length=1605bpback to top protein sequence of NO12G01830.1 >NO12G01830.1-protein ID=NO12G01830.1-protein|Name=NO12G01830.1|organism=Nannochloropsis oceanica|type=polypeptide|length=535bpback to top Synonyms
Publications
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