NO12G01670, NO12G01670 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO12G01670 vs. NCBI_GenBank
Match: EWM25883.1 (hypothetical protein Naga_100054g26 [Nannochloropsis gaditana]) HSP 1 Score: 287.3 bits (734), Expect = 5.100e-74 Identity = 124/211 (58.77%), Postives = 157/211 (74.41%), Query Frame = 0 Query: 72 LVKHDGPMVCVNRGEAPFPEQGFDFFASIQGLETARHFLCQDKEAYSEYWLKEARARFQERKAEREWNAFLRNDGTCGGRRLYWAVMQLPPGRSFNLHVHPCLEVIHVIRGRLHERRMIGPPLSLIEEEGKLVEEMKPVDLSRMVPPPQFRDGVFLEGSLNANEMGSVHQSWTDGGEGCLLMCIWGGGHCNIEGRRLPEGFRMGGCCGQTM 283 +V+HDGP+VC++RG++ PEQG+DF G + L KE Y WL+E R RFQER+ E+ W FL N G CGGR YWA++Q+P RSF+LHVHPC EV+HV+RGRL+ERRM+GPPLSL EEEGK V EM PVDLS + PPP FRDGVF E ++N NEMGSVHQSWT G EGC+++ +W GGHC I+G LP+G+ GGCC +++ Sbjct: 31 VVRHDGPLVCIDRGQSALPEQGYDFLMETLGCDLGSELLGSSKEEYGARWLREVRLRFQERRYEKTWETFLENGGKCGGRCTYWAILQVPSDRSFDLHVHPCFEVLHVLRGRLYERRMLGPPLSLAEEEGKPVREMAPVDLSGLCPPPDFRDGVFQEDTINVNEMGSVHQSWT-GEEGCIILLLWAGGHCFIDGACLPQGYEKGGCCTESV 240
BLAST of NO12G01670 vs. NCBI_GenBank
Match: XP_002177169.1 (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >EEC51632.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 88.2 bits (217), Expect = 4.500e-14 Identity = 47/116 (40.52%), Postives = 67/116 (57.76%), Query Frame = 0 Query: 150 GRRLYWAVMQLPPGRSFNLHVHPCLEVIHVIRGRLHERRMIGPPLS-LIEEEGKLVEEMKPVDLSRMVPPPQFRDGVFLEGSLNANEMGSVHQSWT-DGGEGCLLMCIWGGGHCNI 264 GR+L W+VM PG FNLH HP LE+ + +G LHE RM G P++ ++ ++K L+ + P F G NE+GS+H+S+T GEGC+L+ +WGG H NI Sbjct: 122 GRQLQWSVMDCAPGCQFNLHAHPNLELAYCAKGALHEIRMKGDPITKTFKKHPNKKCQLKGPTLTDLDRPWYF--STLSAGEWLVNEVGSIHKSFTATSGEGCILLVLWGGSHANI 235
BLAST of NO12G01670 vs. NCBI_GenBank
Match: GAX20333.1 (hypothetical protein FisN_9Hh042 [Fistulifera solaris]) HSP 1 Score: 85.1 bits (209), Expect = 3.800e-13 Identity = 52/166 (31.33%), Postives = 80/166 (48.19%), Query Frame = 0 Query: 99 SIQGLETARHFLCQDKEAYSEYWLKEARARFQERKAEREWNAFLRNDGTCGGRRLYWAVMQLPPGRSFNLHVHPCLEVIHVIRGRLHERRMIGPPLSL-IEEEGKLVEEMKPVDLSRMVPPPQFRDGVFLEGSLNANEMGSVHQSWTDGGEGCLLMCIWGGGHCNI 264 S Q L+ K Y + AR R ++ + E L G R+L W +M PG F LH HP +E+++ + G LHE RM G P + + +G + ++++ P F G +G+ NE+GS+H+S+T GC L+ +WGG H NI Sbjct: 30 STQHLQQGARNALLGKYGYESWDFLIARTRDKKNETSDELIELL-TTGKSNQRQLQWTLMDCAPGCQFRLHAHPNIELVYCLEGALHEIRMEGLPFTTSFDSDGSGEGVLIGPSVTQLQRPWTF--GTLQQGTWLVNEVGSIHKSFTASNCGCKLLVLWGGSHANI 192
BLAST of NO12G01670 vs. NCBI_GenBank
Match: GAX26775.1 (hypothetical protein FisN_9Lh042 [Fistulifera solaris]) HSP 1 Score: 82.4 bits (202), Expect = 2.500e-12 Identity = 54/159 (33.96%), Postives = 83/159 (52.20%), Query Frame = 0 Query: 106 ARHFLCQDKEAYSEYWLKEARARFQERKAEREWNAFLRNDGTCGGRRLYWAVMQLPPGRSFNLHVHPCLEVIHVIRGRLHERRMIGPPLS-LIEEEGKLVEEMKPVDLSRMVPPPQFRDGVFLEGSLNANEMGSVHQSWTDGGEGCLLMCIWGGGHCNI 264 AR+ L Q K Y + +RA F ++K + L G R L WA+M PG F LH HP +E+++ + G LHE RM G P + + +G + ++++ P +F G +G+ NE+GS+H+S+T GC L+ +WGG H NI Sbjct: 50 ARNALLQ-KYGYKSWESLISRA-FDKQKEVPDELIELLTTGKSNQRPLQWALMDCMPGCQFRLHAHPNIELVYCMEGALHEIRMDGLPFTKSFDSDGAGEGILIGPSVTQLQRPWKF--GTLQKGTWLVNEVGSIHKSFTASNCGCKLLVLWGGSHANI 204
BLAST of NO12G01670 vs. NCBI_GenBank
Match: OEU14027.1 (TPP_enzyme_N-domain-containing protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 69.3 bits (168), Expect = 2.200e-8 Identity = 44/131 (33.59%), Postives = 63/131 (48.09%), Query Frame = 0 Query: 146 GTCGGRRLYWAVMQLPPGRSFNLHVHPCLEVIHVIRGRLHERRMIG---PPLSLIEEEGKLV------EEMKPVDLSRMVPPPQ---FRDGVFLEGSLNANEMGSVHQSWTDGGEGCLLMCIWGGGHCNIE 265 GT L + P G F+LH HP +E+ I G+LHERR+IG P +L + EG + P LS ++ F D G + N +GS+H+S+T GCLL+ +W G H N + Sbjct: 637 GTSNTHHLKMQFIACPKGFDFDLHGHPNIEICIPIVGKLHERRLIGAHIAPSALRQPEGDATFCDPRSSPLTPEHLSSIMDENDDLAFVDRSVKNGKVLFNPIGSIHKSYTRPEVGCLLLTLWSGIHSNFD 767
BLAST of NO12G01670 vs. NCBI_GenBank
Match: OLP89366.1 (hypothetical protein AK812_SmicGene29192 [Symbiodinium microadriaticum]) HSP 1 Score: 64.7 bits (156), Expect = 5.400e-7 Identity = 39/119 (32.77%), Postives = 64/119 (53.78%), Query Frame = 0 Query: 155 WAVMQLPPGRSFNLHVHPCLEVIHVIRGRLHERRMIGPPLSLIEEEGKLVEEMKPVDLSRMVPPPQFRDGVF---LEGSLNANEMGSVHQSWTDGGEGCLLMCIWGGGHCNIEGRRLPE 271 + + +PP +F +H HP +E++ ++RG + E R+ PP + + K E P DL P +F F EG ANE+GS+HQ++T+ E CL++ +W G + +LPE Sbjct: 117 FVALAIPPRTAFFVHQHPGIELVFLLRGSMSEVRLEDPP--HVHRDCK--EAKAPFDLRN--PEYRFARRTFHAGTEGRWLANEVGSIHQTFTE-DEECLMIAVWPGRYVIFSEEQLPE 228 The following BLAST results are available for this feature:
BLAST of NO12G01670 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 6
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO12G01670 ID=NO12G01670|Name=NO12G01670|organism=Nannochloropsis oceanica|type=gene|length=864bpback to top protein sequence of NO12G01670.1 >NO12G01670.1-protein ID=NO12G01670.1-protein|Name=NO12G01670.1|organism=Nannochloropsis oceanica|type=polypeptide|length=288bpback to top Synonyms
Publications
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