NO12G01640, NO12G01640 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO12G01640 vs. NCBI_GenBank
Match: XP_005856127.1 (hypothetical protein NGA_0334800 [Nannochloropsis gaditana CCMP526] >EKU20263.1 hypothetical protein NGA_0334800 [Nannochloropsis gaditana CCMP526] >EWM25880.1 Ankyrin repeat-containing protein [Nannochloropsis gaditana]) HSP 1 Score: 375.2 bits (962), Expect = 3.800e-100 Identity = 204/394 (51.78%), Postives = 250/394 (63.45%), Query Frame = 0 Query: 134 SRLGHSVSTDSFLKHNEANVPSLLHRGSAGCASSFSSNTSEQVTETKPFPTTHHLTAPFTGVAAVAPFVAIGDNQGPVRHMIDWERSSKQITTWGTNPVLQQYQQHSLSGSKGSDHAGVAAIACSPAPSAHFKRPXXXXXXXXXXXXXXXXTGRAQTPS--NHDISPQEFLWGILQERGYETSPLFSKTQAFFRPPTPKQVEDYDIALLNAVKTGDLAQLQDMAQQGRQMDACNKYGESIVHISCRRGQAETLRFLLAHGGKVHMCDDLGRTPLHDACWAKEPVFDCISTILDADPELIRMVDCRGASPLAYIRRAHWREWKEFFDSKKEKYWAPLPGSSCETELIVRGAPKIEDGEEETGHGV--RPTGTNGRRGDSPTALHSASAAKPVTAS 524 +R+ HS STDSF ++A S L C ++ +++ P T TG + +G + M +WE++SK TTWG + VLQ++QQ + S D GV ++CSP A KRP T A P+ N++ SPQ+FLWGILQERGYETSPL +KTQAFFRPPT KQV DYDI L+ AV+TGDL L+DMA GRQMDACN++GESIVHISCRRGQAETLRFLL +GG+VHMCDDLGRTPLHDACWAK PVFDC+S I+D DP LIR+VDCRGA+PL+YIRR HW EW+EFFDSKKEKYWAPLPG + D E GV P G + ++ LHS+SAA+PVTA+ Sbjct: 46 NRISHSASTDSFFGADKA---STLSSEPEHCRELLNNASNDDAVTVSPSHTASADRGSGTGDV---------EEKGRLLAMEEWEQASKNTTTWGVDMVLQRHQQ-QIFDSDSMDTLGVIPLSCSPPSGAGCKRP------------RKKMTRPASEPALLNNEASPQDFLWGILQERGYETSPLLAKTQAFFRPPTAKQVTDYDIPLVTAVRTGDLGSLRDMAAAGRQMDACNRFGESIVHISCRRGQAETLRFLLENGGRVHMCDDLGRTPLHDACWAKVPVFDCVSAIMDQDPSLIRVVDCRGATPLSYIRREHWPEWREFFDSKKEKYWAPLPGCASHAR------SGRSDSESTISGGVEREPRG----QKENVETLHSSSAARPVTAT 404
BLAST of NO12G01640 vs. NCBI_GenBank
Match: CBJ32591.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 185.7 bits (470), Expect = 4.300e-43 Identity = 87/173 (50.29%), Postives = 111/173 (64.16%), Query Frame = 0 Query: 298 PQEFLWGILQERGYETSPLFSKTQAFFRPPTPKQVEDYDIALLNAVKTGDLAQLQDMAQQGRQMDACNKYGESIVHISCRRGQAETLRFLLAHGGK--VHMCDDLGRTPLHDACWAKEPVFDCISTILDADPELIRMVDCRGASPLAYIRRAHWREWKEFFDSKKEKYWAPLP 469 P++FL +L+ERGY T + K + RPP P QV YD A+L AV D A L+ M GR+MDACN++G+SI+H++CRRG+A LRFLL G V DD GRT +HDACW P FD S +LDAD L+R +D RG+SPL Y+ W W FF+S+KE YW LP Sbjct: 350 PEDFLHDLLRERGYTTEMVAMKETVYHRPPEPDQVAAYDKAILRAVLDEDEAALERMRAAGRRMDACNRFGDSILHMACRRGRAAALRFLLRAAGSAGVVSSDDFGRTVMHDACWTSSPRFDVASAVLDADTRLLRTLDSRGSSPLQYVPEDQWPLWCAFFESRKEVYWPKLP 522
BLAST of NO12G01640 vs. NCBI_GenBank
Match: XP_002183785.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC44967.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 171.8 bits (434), Expect = 6.400e-39 Identity = 74/189 (39.15%), Postives = 112/189 (59.26%), Query Frame = 0 Query: 296 ISPQEFLWGILQERGYETSPLFSKTQAFFRPPTPKQVEDYDIALLNAVKTGDLAQLQDMAQQGRQMDACNKYGESIVHISCRRGQAETLRFLLAHGGKVHMCDDLGRTPLHDACWAKEPVFDCISTILDADPELIRMVDCRGASPLAYIRRAHWREWKEFFDSKKEKYWAPLPGSSCETELIVRGAPKI 485 ISPQ +L ++ RGY T + A++ PT Q YD+ L++ VK + L+++ + G + CN +GES++H+ CRRG + L+ LL G + + DD GRTPLHDACWA +P F + IL+ DP L+ M DCRGA PL+Y+R+ HW EW + +++K YW L ++ + AP + Sbjct: 159 ISPQSYLDDMIAARGYSTEKFKTLQTAYYNKPTALQQASYDVYLIDLVKKNGVETLRNIFKSGVSPNPCNTFGESLLHMICRRGDVDLLKVLLECGTNLQVADDYGRTPLHDACWAAKPAFAVVDLILERDPRLLYMSDCRGALPLSYVRKEHWCEWVPYLEARKHTYWPVLTNNTDTDSQVKAEAPPL 347
BLAST of NO12G01640 vs. NCBI_GenBank
Match: GAX19732.1 (hypothetical protein FisN_19Hh320 [Fistulifera solaris]) HSP 1 Score: 156.0 bits (393), Expect = 3.600e-34 Identity = 68/178 (38.20%), Postives = 103/178 (57.87%), Query Frame = 0 Query: 287 RAQTPSNHDISPQEFLWGILQERGYETSPLFSKTQAFFRPPTPKQVEDYDIALLNAVKTGDLAQLQDMAQQGRQMDACNKYGESIVHISCRRGQAETLRFLLAHGGKVHMCDDLGRTPLHDACWAKEPVFDCISTILDADPELIRMVDCRGASPLAYIRRAHWREWKEFFDSKKEKYW 465 R+ + S + + PQ +L +L+ RGY T S ++ PT Q+ YD+ L+ V+ ++ ++ Q G + CN+Y E+I H CR G L L+ G + DD GRTPLHDACWA P FD + IL +D ++ M+D RG PL Y+R+ H+ +W +FF+SKKE++W Sbjct: 80 RSSSGSGNLMDPQVYLDAMLRSRGYSTKRYESLKTSYHNKPTAHQLASYDVFLIGLVRKHEVEHFGEIMQTGISSNPCNQYSETIAHTVCRHGSKAMLDVLVERGCDFQVADDYGRTPLHDACWAATPSFDVVEIILKSDVRMLHMIDARGHCPLNYVRKEHYDQWIKFFESKKEEFW 257
BLAST of NO12G01640 vs. NCBI_GenBank
Match: GAX22250.1 (hypothetical protein FisN_19Lh320 [Fistulifera solaris]) HSP 1 Score: 154.8 bits (390), Expect = 8.100e-34 Identity = 66/169 (39.05%), Postives = 99/169 (58.58%), Query Frame = 0 Query: 296 ISPQEFLWGILQERGYETSPLFSKTQAFFRPPTPKQVEDYDIALLNAVKTGDLAQLQDMAQQGRQMDACNKYGESIVHISCRRGQAETLRFLLAHGGKVHMCDDLGRTPLHDACWAKEPVFDCISTILDADPELIRMVDCRGASPLAYIRRAHWREWKEFFDSKKEKYW 465 + PQ +L +L+ RGY T S ++ PT Q+ YD+ L+ V+ ++ Q Q++ Q G + CN+Y E+I H CR G L L+ G + + DD GRTPLHDACWA P D + IL D ++ M+D RG PL Y+R+ H+ +W +FF+SKK+++W Sbjct: 1 MDPQVYLDAMLRSRGYSTKRYESLKTSYHNKPTAHQLASYDVFLIGLVRKHEVEQFQEIMQTGISSNPCNQYSETIAHTVCRHGSKAMLDVLVERGCDLQVADDYGRTPLHDACWAATPSLDVVEIILKTDVRMLHMIDARGHCPLNYVRKEHYDQWIKFFESKKDEFW 169
BLAST of NO12G01640 vs. NCBI_GenBank
Match: XP_002181990.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC46530.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 154.5 bits (389), Expect = 1.100e-33 Identity = 70/185 (37.84%), Postives = 106/185 (57.30%), Query Frame = 0 Query: 288 AQTPSNHDI-----SPQEFLWGILQERGYETSPLFSKTQAFFRPPTPKQVEDYDIALLNAVKTGDLAQLQDMAQQGRQMDACNKYGESIVHISCRRGQAETLRFLLAHGGKVHMCDDLGRTPLHDACWAKEPVFDCISTILDADPELIRMVDCRGASPLAYIRRAHWREWKEFFDSKKEKYWAPL 468 A TPS+ ++ SP EFL IL+ RGY T AFF PTP Q+ YD+ L++ +K D +++++ G +ACN +GES++H +CR G L+ + GG++ + D GRT LHD CW P F S ++ +P L+ M DCRG PL Y+R+ H+ W ++ + +KYW P+ Sbjct: 74 ADTPSDQEVESVPTSPHEFLESILKSRGYCTKQYPVLQSAFFNQPTPLQLASYDVKLIDLLKRQDEEKIREILSCGVSANACNIHGESLMHKACRMGFHRILQIFIDFGGEIKISDAQGRTLLHDTCWGARPSFQAFSLLIQREPSLLFMADCRGVCPLDYVRKDHYIFWIDYLECIVDKYWPPV 258
BLAST of NO12G01640 vs. NCBI_GenBank
Match: GAX19139.1 (hypothetical protein FisN_3Lh081 [Fistulifera solaris]) HSP 1 Score: 154.5 bits (389), Expect = 1.100e-33 Identity = 72/180 (40.00%), Postives = 102/180 (56.67%), Query Frame = 0 Query: 285 TGRAQTPSNHDISPQEFLWGILQERGYETSPLFSKTQAFFRPPTPKQVEDYDIALLNAVKTGDLAQLQDMAQQGRQMDACNKYGESIVHISCRRGQAETLRFLLAHGGKVHMCDDLGRTPLHDACWAKEPVFDCISTILDADPELIRMVDCRGASPLAYIRRAHWREWKEFFDSKKEKYW 465 +G + + +SPQ +L L+ RG T + + PTP Q+ YD L+ VK GD ++ M Q G + C+ G+S++H CRRG ++ L+ L +G + + D LGRTPLH+ CWA P FD I IL AD LI MVD GA+PL+Y+R+ HWR+W F +KK W Sbjct: 148 SGTSSDKETNWLSPQGYLDVFLRSRGLSTEHFKALQTGYSNQPTPLQISSYDPFLVERVKHGDFQAVEKMLQAGISPNPCSSAGDSLIHFLCRRGDSKMLKLFLDYGASIQISDSLGRTPLHEVCWA-VPCFDTIELILMADVNLINMVDGLGAAPLSYVRKDHWRQWIAFLKAKKNVLW 326
BLAST of NO12G01640 vs. NCBI_GenBank
Match: GAX18287.1 (hypothetical protein FisN_23Hh180 [Fistulifera solaris]) HSP 1 Score: 152.9 bits (385), Expect = 3.100e-33 Identity = 76/195 (38.97%), Postives = 106/195 (54.36%), Query Frame = 0 Query: 296 ISPQEFLWGILQERGYETSPLFSKTQAFFRPPTPKQVEDYDIALLNAVKTGDLAQLQDMAQQGRQMDACNKYGESIVHISCRRGQAETLRFLLAHGGKVHMCDDLGRTPLHDACWAKEPVFDCISTILDADPELIRMVDCRGASPLAYIRRAHWREWKEFFDSKKEKYWAPLPGSSCETELIVRGAPKIEDGEEE 491 ISP EFL L+ERGY T + A++ PTP Q+ YD+ L+ V+ L +M Q G + CN+YGES+VH R G L+ LL G V + DD GRTPLHDA W P FD + +L DP L+ ++D RG PL Y+R+ W W FF + + YWA +PG + L+ + ++ + E Sbjct: 166 ISPHEFLVQKLEERGYCTHTFNTLDTAYYIKPTPLQLASYDVYLIGQVRAHQPEGLLEMIQCGLSPNPCNRYGESLVHTVSRFGNHVLLKVLLDQGCTVQVSDDYGRTPLHDAFWTARPSFDTVGLLLQQDPHLLFLMDTRGNVPLDYVRKEDWETWIHFFRDRLDVYWA-IPGDPEPSPLMTKSVVRLPLADPE 359
BLAST of NO12G01640 vs. NCBI_GenBank
Match: GAX15610.1 (hypothetical protein FisN_3Hh081 [Fistulifera solaris]) HSP 1 Score: 152.1 bits (383), Expect = 5.200e-33 Identity = 69/180 (38.33%), Postives = 103/180 (57.22%), Query Frame = 0 Query: 285 TGRAQTPSNHDISPQEFLWGILQERGYETSPLFSKTQAFFRPPTPKQVEDYDIALLNAVKTGDLAQLQDMAQQGRQMDACNKYGESIVHISCRRGQAETLRFLLAHGGKVHMCDDLGRTPLHDACWAKEPVFDCISTILDADPELIRMVDCRGASPLAYIRRAHWREWKEFFDSKKEKYW 465 +G + + +SPQ +L L+ RG T + + PTP Q+ YD L+ VK GD ++ M Q G + C+ G+S++H+ CRRG ++ LR L +G + D LGRTPLH+ CWA P FD I IL AD L+ +VD GA+PL+Y+R+ +W++W F +KK +W Sbjct: 148 SGTSSDKETNWLSPQGYLDVFLRSRGLSTERFKALQTGYSNRPTPLQISSYDPFLVERVKNGDFQAVEKMLQAGISPNPCSSAGDSLIHLLCRRGDSKMLRLFLEYGASFQVADSLGRTPLHEVCWA-VPCFDTIELILMADANLLNIVDGLGAAPLSYVRKDYWKQWIAFLKAKKNVFW 326
BLAST of NO12G01640 vs. NCBI_GenBank
Match: GAX21232.1 (hypothetical protein FisN_23Lh180 [Fistulifera solaris]) HSP 1 Score: 150.2 bits (378), Expect = 2.000e-32 Identity = 72/189 (38.10%), Postives = 105/189 (55.56%), Query Frame = 0 Query: 296 ISPQEFLWGILQERGYETSPLFSKTQAFFRPPTPKQVEDYDIALLNAVKTGDLAQLQDMAQQGRQMDACNKYGESIVHISCRRGQAETLRFLLAHGGKVHMCDDLGRTPLHDACWAKEPVFDCISTILDADPELIRMVDCRGASPLAYIRRAHWREWKEFFDSKKEKYWAPLPGSSCETELIVRGAPKI 485 +SP EFL L+ERG+ T + A++ PTP Q+ YD+ L+ V+ L +M Q G + CN+YGES+VH R G L+ LL G V + DD GRTPLHDA W P F+ + +L DP L+ ++D RG PL Y+R+ W W FF + + YWA +PG + + L+ + ++ Sbjct: 166 VSPHEFLVQKLKERGHCTQTFKTLDTAYYIKPTPLQLASYDVYLIGQVRGHQPEGLLEMIQCGLSPNPCNRYGESLVHTVSRFGNHVLLKVLLDQGCTVQVSDDYGRTPLHDAFWTARPSFETVELLLQQDPHLLFLMDTRGNVPLDYVRKGDWETWVHFFRDRLDVYWA-IPGDTEPSPLMTKSVVRL 353 The following BLAST results are available for this feature:
BLAST of NO12G01640 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO12G01640 ID=NO12G01640|Name=NO12G01640|organism=Nannochloropsis oceanica|type=gene|length=1770bpback to top protein sequence of NO12G01640.1 >NO12G01640.1-protein ID=NO12G01640.1-protein|Name=NO12G01640.1|organism=Nannochloropsis oceanica|type=polypeptide|length=590bpback to top Synonyms
Publications
|