NO12G01630, NO12G01630 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO12G01630 vs. NCBI_GenBank
Match: XP_005856128.1 (ferredoxin [Nannochloropsis gaditana CCMP526] >EKU20264.1 ferredoxin [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 315.5 bits (807), Expect = 2.200e-82 Identity = 160/219 (73.06%), Postives = 175/219 (79.91%), Query Frame = 0 Query: 90 DSQNEEVDKIGFSISKTKRDGLSTPSDGGSTDADDRAAMQRNLRQAQQASKMMASGASAEQLSAYTGIKLVDLDEGFVPKLQETPSHMFVDRDESGALKQARFVYVDEYTCIGCTNCAMVAPATFYMDDEHGRARVYQQWKDRPKTIQTAIETCPVDCIHYVPFEELERLEGERPGIKINYKARLVGSD----TSSADLGMQDISGNNDLRCTNCPTRG 305 D EE D GFS+ + KR ++ P +D A +QR RQA+QASKMMASGASA QLSAYTGIKLV+L+ GF PKLQETPSH FVDRDE G LKQARFVYVDEYTCIGCTNCAM AP TFYMDDEHGRARV+QQWKDRP+TIQTAIETCPVDCIHYVPFEELERLE ER G+ INYKARLVGSD +S D GMQ+ISGN D RC NCP+RG Sbjct: 6 DKSGEE-DGTGFSVVR-KRGVVAGPGGYEDIGPEDIAELQRKQRQAEQASKMMASGASAAQLSAYTGIKLVELETGFTPKLQETPSHQFVDRDEEGTLKQARFVYVDEYTCIGCTNCAMTAPNTFYMDDEHGRARVFQQWKDRPRTIQTAIETCPVDCIHYVPFEELERLEKERAGMTINYKARLVGSDGLLSSSGGDQGMQEISGNKDFRCGNCPSRG 222
BLAST of NO12G01630 vs. NCBI_GenBank
Match: EWM25866.1 (ferredoxin [Nannochloropsis gaditana]) HSP 1 Score: 315.5 bits (807), Expect = 2.200e-82 Identity = 160/219 (73.06%), Postives = 175/219 (79.91%), Query Frame = 0 Query: 90 DSQNEEVDKIGFSISKTKRDGLSTPSDGGSTDADDRAAMQRNLRQAQQASKMMASGASAEQLSAYTGIKLVDLDEGFVPKLQETPSHMFVDRDESGALKQARFVYVDEYTCIGCTNCAMVAPATFYMDDEHGRARVYQQWKDRPKTIQTAIETCPVDCIHYVPFEELERLEGERPGIKINYKARLVGSD----TSSADLGMQDISGNNDLRCTNCPTRG 305 D EE D GFS+ + KR ++ P +D A +QR RQA+QASKMMASGASA QLSAYTGIKLV+L+ GF PKLQETPSH FVDRDE G LKQARFVYVDEYTCIGCTNCAM AP TFYMDDEHGRARV+QQWKDRP+TIQTAIETCPVDCIHYVPFEELERLE ER G+ INYKARLVGSD +S D GMQ+ISGN D RC NCP+RG Sbjct: 11 DKSGEE-DGTGFSVVR-KRGVVAGPGGYEDIGPEDIAELQRKQRQAEQASKMMASGASAAQLSAYTGIKLVELETGFTPKLQETPSHQFVDRDEEGTLKQARFVYVDEYTCIGCTNCAMTAPNTFYMDDEHGRARVFQQWKDRPRTIQTAIETCPVDCIHYVPFEELERLEKERAGMTINYKARLVGSDGLLSSSGGDQGMQEISGNKDFRCGNCPSRG 227
BLAST of NO12G01630 vs. NCBI_GenBank
Match: GAX27249.1 (ferredoxin [Fistulifera solaris]) HSP 1 Score: 173.7 bits (439), Expect = 1.000e-39 Identity = 86/166 (51.81%), Postives = 108/166 (65.06%), Query Frame = 0 Query: 170 LQETPSHMFVD-RDESGALKQARFVYVDEYTCIGCTNCAMVAPATFYMDDEHGRARVYQQWKDRPKTIQTAIETCPVDCIHYVPFEELERLEGERPGIKINYKARLVGSDTSSADL-----------GMQDISGNNDLRCTNCPTRGCFNCPMWGVGENPEYKRKQ 324 L SH V+ DE+G + + VYVDE+TCIGCTNCAM+A +TFYM+ EHGRARV+QQW D +TIQ AIETCPVDCIHYVP+EEL +LE ER + IN+KARLV + L Q ISGN+ RC NCP+RG +NPEY++++ Sbjct: 185 LATVESHTRVEIDDETGEPVRLQMVYVDEHTCIGCTNCAMIAQSTFYMNPEHGRARVFQQWGDDDETIQIAIETCPVDCIHYVPYEELVKLEIERRDMNINFKARLVSQAENGNSLSHRVGGANRFTAPQKISGNSAPRCNNCPSRGXXXXXXXXXXKNPEYEKRE 350
BLAST of NO12G01630 vs. NCBI_GenBank
Match: GAX27709.1 (ferredoxin [Fistulifera solaris]) HSP 1 Score: 173.3 bits (438), Expect = 1.400e-39 Identity = 86/166 (51.81%), Postives = 108/166 (65.06%), Query Frame = 0 Query: 170 LQETPSHMFVDRD-ESGALKQARFVYVDEYTCIGCTNCAMVAPATFYMDDEHGRARVYQQWKDRPKTIQTAIETCPVDCIHYVPFEELERLEGERPGIKINYKARLVGSDTSSADL-----------GMQDISGNNDLRCTNCPTRGCFNCPMWGVGENPEYKRKQ 324 L SH V+ D E+G + + VYVDE+TCIGCTNCAM+A +TFYM+ EHGRARV+QQW D +TIQ AIETCPVDCIHYVP+EEL +LE ER + IN+KARLV + L Q ISGN+ RC NCP+RG +NPEY++++ Sbjct: 195 LATVESHTRVEIDEETGEPVRLQMVYVDEHTCIGCTNCAMIAQSTFYMNPEHGRARVFQQWGDDDETIQIAIETCPVDCIHYVPYEELVKLEIERRDMNINFKARLVSQAENGNSLSHRVGGANRFTAPQKISGNSAPRCNNCPSRGXXXXXXXXXXKNPEYEKRE 360
BLAST of NO12G01630 vs. NCBI_GenBank
Match: CBJ27569.1 (ferredoxin (cyanobacterial type ferredoxin family) [Ectocarpus siliculosus]) HSP 1 Score: 172.9 bits (437), Expect = 1.800e-39 Identity = 86/167 (51.50%), Postives = 109/167 (65.27%), Query Frame = 0 Query: 137 QASKMMASGASAEQLSAYTGIKLVDLDEGFVPK--LQETPSHMFVDRDESGALKQARFVYVDEYTCIGCTNCAMVAPATFYMDDEHGRARVYQQWKDRPKTIQTAIETCPVDCIHYVPFEELERLEGERPGIKINYKARLVGSDTSSADLGMQDISGNNDLRCTNCP 302 + +K+ A A+A + VD + L+ PS V +DE+G + RFVYVDEYTCIGCT+C AP+TF+M++E GRARVYQQ +D +QTAI TCPVDCIHYV F EL RLE ER GI IN+KA+LVG+D + GMQ ISG+ +RC NCP Sbjct: 287 EEAKVRADQAAARAFEKFNQAAFVDSSAWRAEEELLKVAPSSSLVKKDENGVPLEDRFVYVDEYTCIGCTHCNHQAPSTFFMEEEFGRARVYQQGRDTADAVQTAILTCPVDCIHYVDFPELVRLEKEREGISINFKAKLVGNDHDNVANGMQRISGDGGMRCDNCP 453
BLAST of NO12G01630 vs. NCBI_GenBank
Match: OSX71709.1 (hypothetical protein BU14_0507s0007 [Porphyra umbilicalis]) HSP 1 Score: 154.8 bits (390), Expect = 5.000e-34 Identity = 74/135 (54.81%), Postives = 91/135 (67.41%), Query Frame = 0 Query: 191 RFVYVDEYTCIGCTNCAMVAPATFYMDDEHGRARVYQQWKDRPKTIQTAIETCPVDCIHYVPFEELERLEGERPGIKINYKARLVGSD-TSSADLGMQ--DISGNNDLRCTNCPTRGCFNCPMWGVGENPEYKRK 323 RFVYVDE CIGCT+CA A TF++DDE GRAR ++Q D P+T+ AI+TCPV+CI+YV F++L LE ER G IN ARLVG D S G D+ +RC +CP RGC CP++GVG NPEY RK Sbjct: 7 RFVYVDEVDCIGCTHCAATARHTFFIDDEWGRARAFRQDGDDPETVAEAIDTCPVNCIYYVSFDDLVTLEREREGQIINNAARLVGGDGVSEGPRGTSEADVMRTGGIRCEDCPGRGCAECPLYGVGRNPEYLRK 141
BLAST of NO12G01630 vs. NCBI_GenBank
Match: XP_009042343.1 (hypothetical protein AURANDRAFT_72808, partial [Aureococcus anophagefferens] >EGB02960.1 hypothetical protein AURANDRAFT_72808, partial [Aureococcus anophagefferens]) HSP 1 Score: 152.1 bits (383), Expect = 3.200e-33 Identity = 75/154 (48.70%), Postives = 96/154 (62.34%), Query Frame = 0 Query: 175 SHMFVDRDESG------ALKQARFVYVDEYTCIGCTNCAMVAPATFYMDDEHGRARVYQQWKDRPKTIQTAIETCPVDCIHYVPFEELERLEGERPGIKI--NYKARLVGSD-----TSSADLGMQDISGNNDLRCTNCPTRGCFNCPMWGVGE 316 SH +D DE G + VYVDE TC+GCT CA +AP TF M D+HGRAR + Q D +TI+ AI TCPV CIHYVP++EL LE R + + N+K RLVG++ A +Q+IS N+ LRC NCPT C +CPM+GVG+ Sbjct: 545 SHELIDEDEDGDPVSLCSSFTYTAVYVDEATCVGCTMCATIAPQTFLMTDDHGRARSFNQEGDDEETIREAISTCPVSCIHYVPWDELVALERNREAVMLSYNFKGRLVGNEGLGIAADGAGEALQEISTNSALRCNNCPTNECRDCPMFGVGD 698
BLAST of NO12G01630 vs. NCBI_GenBank
Match: EJK65860.1 (hypothetical protein THAOC_13242 [Thalassiosira oceanica]) HSP 1 Score: 152.1 bits (383), Expect = 3.200e-33 Identity = 91/218 (41.74%), Postives = 122/218 (55.96%), Query Frame = 0 Query: 122 ADDRAAMQRNLRQAQQASKMMASGASAEQLSAYTGIKL-----VDLDE-------------GFVPKLQE------TPSHMFVDRDE-SGALKQARFVYVDEYTCIGCTNCAMVAPATFYMDDEHGRARVYQQWKDRPKTIQTAIETCPVDCIHYVPFEELERLEGERPGIKINYKARLVGSDTSSADL-------------GMQDISGNNDLRCTNCP 302 AD+ + M + +A +A +M G SAE +S+ GI +D D GF +L E SH V+ DE + + + VYVDE +CIGCTNCA +A +TF+M+ EHGRARV+QQW D +T+Q AI+TCPV+CIHYVP++EL+ LE ER G IN KARLV +++ + G Q ISGN RC NCP Sbjct: 100 ADEVSFMAKEAERADKARQMNELGYSAESISSTLGIATDEGMEIDQDNEVFQAFKEETAKTGFGLQLDEEVDMELVESHTTVEWDEDTDEPVRLQMVYVDEVSCIGCTNCACIAQSTFFMEGEHGRARVFQQWGDDDETVQVAIDTCPVNCIHYVPYDELKSLEIERRGQNINNKARLVSQAENASGIGPQATYGGAGAFTGQQKISGNMGSRCNNCP 317
BLAST of NO12G01630 vs. NCBI_GenBank
Match: XP_005715466.1 (unnamed protein product [Chondrus crispus] >CDF35647.1 unnamed protein product [Chondrus crispus]) HSP 1 Score: 136.7 bits (343), Expect = 1.400e-28 Identity = 77/208 (37.02%), Postives = 109/208 (52.40%), Query Frame = 0 Query: 116 DGGSTDADDRAAMQRNLRQAQQASKMMASGASAEQLSAYTGIK-LVDLDEGFVPKLQETPSHMFVDRDESGALKQARFVYVDEYTCIGCTNCAMVAPATFYMDDEHGRARVYQQWKDRPKTIQTAIETCPVDCIHYVPFEELERLEGERPGIKINYKARLV-GSDTSSADLG--MQDISGNNDLRCTNCPTRGCFNCPMWGVGENPEY 320 DG S + + + Q + + + + + ++ + D L S V+ DE G + R+VYV+E CIGCT+CA A TF+M+ E GRARV+ Q D ++ AI TCPV+CI+YV + +L LE R IN ARLV GSD S + G + + +RC +CP RGC CP++GVGENPEY Sbjct: 73 DGSSAEGNGKPPAQEGSSAPPSLDESLIGSTALDSEEYFERLREITQADTTLSNPLGLKKSFEIVELDEDGMGPRDRYVYVEERDCIGCTHCATTATGTFFMESEWGRARVFNQSGDTEGDVEVAIGTCPVNCIYYVDWNDLVALENMRDDQVINNTARLVGGSDPSGSRKGTTKTKVMDSGIMRCEDCPGRGCPQCPLFGVGENPEY 280
BLAST of NO12G01630 vs. NCBI_GenBank
Match: KOO35815.1 (ferredoxin [Chrysochromulina sp. CCMP291]) HSP 1 Score: 136.0 bits (341), Expect = 2.400e-28 Identity = 73/156 (46.79%), Postives = 92/156 (58.97%), Query Frame = 0 Query: 174 PSHMFVDRDESGALK-QARFVYVDEYTCIGCTNCAMVAPATFYMDDEHGRARVYQQWKDRPKTIQTAIETCPVDCIHYVPFEELERLEGERPGIKINYKARLVGSDTSSADLG------MQDISGNN---DLRCTNCPTRGCFNCPMWGVGENPEY 320 PSHM ++ DE R YVDE TCIGC NCA VA TF+M+D+ G+ARVYQQ D + I AI+TCPV+CIHYV E+L LE ER + + GS + G + + NN +RC NCP+RGC CPM+GVG+NP Y Sbjct: 30 PSHMRLELDEETKKPVLPRMTYVDEQTCIGCKNCACVAKNTFFMEDDFGKARVYQQGGDTVEDIAIAIDTCPVNCIHYVSHEDLVILEQERMAREGDVTINNYGSFKQAWTGGALAVPKTKALFYNNPAMGMRCNNCPSRGCRECPMFGVGQNPIY 185 The following BLAST results are available for this feature:
BLAST of NO12G01630 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO12G01630 ID=NO12G01630|Name=NO12G01630|organism=Nannochloropsis oceanica|type=gene|length=1092bpback to top protein sequence of NO12G01630.1 >NO12G01630.1-protein ID=NO12G01630.1-protein|Name=NO12G01630.1|organism=Nannochloropsis oceanica|type=polypeptide|length=364bpback to top Synonyms
Publications
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