NO12G01620, NO12G01620 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO12G01620 vs. NCBI_GenBank
Match: XP_005856115.1 (chaperone -domain containing protein [Nannochloropsis gaditana CCMP526] >EKU20251.1 chaperone -domain containing protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 203.0 bits (515), Expect = 1.100e-48 Identity = 143/203 (70.44%), Postives = 155/203 (76.35%), Query Frame = 0 Query: 44 CSRYLSSPPRPSLPXXXXXXXXXXKQTQR-RRQWRELGGLSSTYSLSSRSSVNRSFSTTQWQQIRALHATRRKENIMVGGLVVAGSALVLQYGLKAYNQWQAKKXXXXXXXXXXXXXXXXXXXXXXXXXXSSLFAKRFYEGGFEDKMTRREAALILGVRESASPQRIKEAHRRILMLNHPDTGGSTYLASKINEAKELLLKGK 246 C +LSS P K+++ +R+W E L T S +R S QWQQIRALHATRR+EN++VGGLVVAG AL LQYGL+AY QWQAKK XXXXXXXXXXXXXXXXXXXXXX FAKRFYEGGFEDKMTRREAALILGVRESASPQRIKEAHRRILMLNHPDTGGSTYLASKINEAKELLLKG+ Sbjct: 32 CGSWLSSLTSAIQPPSLSTDAQGEKRSKGIQRRW-ESRRLVRTMSHGGAGEDSRLMS--QWQQIRALHATRRQENLVVGGLVVAGGALALQYGLRAYKQWQAKK--AAXXXXXXXXXXXXXXXXXXXXXXXXXFAKRFYEGGFEDKMTRREAALILGVRESASPQRIKEAHRRILMLNHPDTGGSTYLASKINEAKELLLKGR 229
BLAST of NO12G01620 vs. NCBI_GenBank
Match: XP_009841251.1 (hypothetical protein H257_14986 [Aphanomyces astaci] >ETV69394.1 hypothetical protein H257_14986 [Aphanomyces astaci]) HSP 1 Score: 137.9 bits (346), Expect = 4.300e-29 Identity = 81/146 (55.48%), Postives = 99/146 (67.81%), Query Frame = 0 Query: 104 QQIRALHATRRKEN-IMVGGLVVAGSALVLQYGLKAYNQWQAKKXXXXXXXXXXXXXXXXXXXXXXXXXXSSLF---AKRFYEGGFEDKMTRREAALILGVRESASPQRIKEAHRRILMLNHPDTGGSTYLASKINEAKELLLKGK 246 QQ R+LHATR ++N ++VG L VA +AL +Y L+AY +QAKK SS+F + FY+G FEDKMTRREAALILGVRESASP RI+ AHR++L+ NHPDTGGST+L+SKINEAKELLL GK Sbjct: 33 QQRRSLHATRSQDNALVVGSLGVAAAALGGKYLLEAYEGYQAKK--------------ASSPSGTGASSSSSVFNMSYRNFYDGPFEDKMTRREAALILGVRESASPDRIRNAHRKLLIANHPDTGGSTFLSSKINEAKELLLGGK 164
BLAST of NO12G01620 vs. NCBI_GenBank
Match: XP_012196083.1 (hypothetical protein SPRG_02142 [Saprolegnia parasitica CBS 223.65] >KDO33334.1 hypothetical protein SPRG_02142 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 135.2 bits (339), Expect = 2.800e-28 Identity = 76/161 (47.20%), Postives = 105/161 (65.22%), Query Frame = 0 Query: 88 LSSRSSVNRSFSTTQW--QQIRALHATRRKENI-MVGGLVVAGSALVLQYGLKAYNQWQAKKXXXXXXXXXXXXXXXXXXXXXXXXXXSSLFAKRFYEGGFEDKMTRREAALILGVRESASPQRIKEAHRRILMLNHPDTGGSTYLASKINEAKELLLKGK 246 L S++ RS + Q QQ R LHATR+++++ +VGG VA +AL +Y L++Y +++A K ++ + FY+G FEDKMTRREAALILGVRE+ASP RI+ AHR++L+ NHPDTGGST+L++KINEAKE+LL GK Sbjct: 11 LRRSSALPRSLAPIQLVPQQARYLHATRKQDSLAIVGGAGVAVAALSAKYLLQSYQEYKANKAAAATEAPAGKNEGKAAASERGSFFNFNMSYRNFYDGPFEDKMTRREAALILGVRENASPDRIRNAHRKLLISNHPDTGGSTFLSTKINEAKEMLLNGK 171
BLAST of NO12G01620 vs. NCBI_GenBank
Match: OQR91727.1 (hypothetical protein ACHHYP_04444 [Achlya hypogyna]) HSP 1 Score: 134.8 bits (338), Expect = 3.600e-28 Identity = 75/143 (52.45%), Postives = 101/143 (70.63%), Query Frame = 0 Query: 104 QQIRALHATRRKEN-IMVGGLVVAGSALVLQYGLKAYNQWQAKKXXXXXXXXXXXXXXXXXXXXXXXXXXSSLFAKRFYEGGFEDKMTRREAALILGVRESASPQRIKEAHRRILMLNHPDTGGSTYLASKINEAKELLLKGK 246 QQ R LHATR +++ ++VGG VA +A+ ++Y L++Y Q+QA K XXXX ++ + FY+G FEDKMTRREAALILGVRE+A+P RI+ AHR++L+ NHPDTGGST+L++KINEAKE+LL GK Sbjct: 24 QQSRYLHATRPQDSALIVGGAGVAVAAMSVKYLLQSYQQYQAAKAAAPXXXXKGKSDAKGTSSERGSFFNFNMSYRNFYDGPFEDKMTRREAALILGVRENANPDRIRNAHRKLLIANHPDTGGSTFLSTKINEAKEMLLNGK 166
BLAST of NO12G01620 vs. NCBI_GenBank
Match: XP_008874563.1 (hypothetical protein H310_10090 [Aphanomyces invadans] >ETV96786.1 hypothetical protein H310_10090 [Aphanomyces invadans]) HSP 1 Score: 132.5 bits (332), Expect = 1.800e-27 Identity = 78/146 (53.42%), Postives = 98/146 (67.12%), Query Frame = 0 Query: 104 QQIRALHATRRKEN-IMVGGLVVAGSALVLQYGLKAYNQWQAKKXXXXXXXXXXXXXXXXXXXXXXXXXXSSLF---AKRFYEGGFEDKMTRREAALILGVRESASPQRIKEAHRRILMLNHPDTGGSTYLASKINEAKELLLKGK 246 QQ R+LHATRR+EN I+VG L VA +AL +Y L+AY ++A K SS+F + FY+G FE+KMTRREAALILGVRESAS RI+ AHR++L+ NHPDTGGST++++KINEAKELLL GK Sbjct: 51 QQRRSLHATRRQENAIVVGSLGVAAAALGGKYLLEAYEGYKANK---------------AASGTDKSSASSSMFNMSYRNFYDGPFEEKMTRREAALILGVRESASADRIRNAHRKLLIANHPDTGGSTFISTKINEAKELLLGGK 181
BLAST of NO12G01620 vs. NCBI_GenBank
Match: CBJ29706.1 (Mitochondrial import inner membrane translocase TIM14 homolog [Ectocarpus siliculosus]) HSP 1 Score: 131.7 bits (330), Expect = 3.100e-27 Identity = 93/184 (50.54%), Postives = 118/184 (64.13%), Query Frame = 0 Query: 79 LGGLSSTYSLSSRSSVNRSFSTTQ--WQQIRALHATRRKE-NIMVGGLVVAGSALVLQYGLKAYNQWQAKKXXXXXXXXXXXXXXXXXXXXXXXXXXS--------------SLFAKRFYEGGFEDKMTRREAALILGVRESASPQRIKEAHRRILMLNHPDTGGSTYLASKINEAKELLLKGK 246 LG L +T S + S N + Q Q R +H +RR E ++++ G +A SA+V +YGL Y ++QA XXXXXXXXXXXXXX F KR Y+GGFE+KMTR+EAALILGVRESA+ QRIK++HRRILM+NHPD GGS Y+A+KINEAKE+LLKG+ Sbjct: 25 LGRLGATSSSNRESGANDRHARAQALVSQARDIHVSRRNESSVLITGAGIAVSAMVARYGLMEYQKYQAAHPEITEEADSGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXFGAFGKRHYDGGFEEKMTRKEAALILGVRESATAQRIKDSHRRILMINHPDKGGSKYMAAKINEAKEILLKGR 208
BLAST of NO12G01620 vs. NCBI_GenBank
Match: GAX96430.1 (Hypothetical protein PINS_004317 [Pythium insidiosum]) HSP 1 Score: 130.2 bits (326), Expect = 8.900e-27 Identity = 76/160 (47.50%), Postives = 102/160 (63.75%), Query Frame = 0 Query: 87 SLSSRSSVNRSFSTTQWQQIRALHATRRKEN-IMVGGLVVAGSALVLQYGLKAYNQWQAKKXXXXXXXXXXXXXXXXXXXXXXXXXXSSLFAKRFYEGGFEDKMTRREAALILGVRESASPQRIKEAHRRILMLNHPDTGGSTYLASKINEAKELLLKGK 246 S + + RS Q IR LH+T ++E+ I++ GL VAG+A+ +Y L+A+ +QA+ SS + FY+G FEDKMTRREAALILGVRESAS +RI+ AHR++L+LNHPDTGGST+LA+KIN+AKELLL G+ Sbjct: 145 SRKDQETTERSPLLVQSSAIRQLHSTPQRESAILLAGLGVAGAAMGAKYLLQAWEAYQAR---------------------PKSEKVSSWKYRNFYDGPFEDKMTRREAALILGVRESASEERIRNAHRKLLILNHPDTGGSTFLATKINQAKELLLSGQ 283
BLAST of NO12G01620 vs. NCBI_GenBank
Match: CCI48484.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 129.8 bits (325), Expect = 1.200e-26 Identity = 70/139 (50.36%), Postives = 94/139 (67.63%), Query Frame = 0 Query: 107 RALHATRRKENI-MVGGLVVAGSALVLQYGLKAYNQWQAKKXXXXXXXXXXXXXXXXXXXXXXXXXXSSLFAKRFYEGGFEDKMTRREAALILGVRESASPQRIKEAHRRILMLNHPDTGGSTYLASKINEAKELLLKG 245 R +H TR+++++ ++GGL +A SA+ ++Y +KAY ++ + S K FYEG FE++MTRREAALILGVRESASP+RI+ AHR++L+LNHPDTGGSTYLASKINEAK+LLL G Sbjct: 35 RHIHMTRQQDSVFLLGGLGIAASAMGIKYVIKAYEAYKLRPKTPSL----------------------SWNYKSFYEGPFEERMTRREAALILGVRESASPKRIQNAHRKLLILNHPDTGGSTYLASKINEAKQLLLSG 151
BLAST of NO12G01620 vs. NCBI_GenBank
Match: XP_024575323.1 (mitochondrial import inner membrane translocase subunit tim14-1-like [Plasmopara halstedii] >CEG38954.1 mitochondrial import inner membrane translocase subunit tim14-1-like [Plasmopara halstedii]) HSP 1 Score: 129.8 bits (325), Expect = 1.200e-26 Identity = 71/145 (48.97%), Postives = 96/145 (66.21%), Query Frame = 0 Query: 101 TQWQQIRALHATRRKEN-IMVGGLVVAGSALVLQYGLKAYNQWQAKKXXXXXXXXXXXXXXXXXXXXXXXXXXSSLFAKRFYEGGFEDKMTRREAALILGVRESASPQRIKEAHRRILMLNHPDTGGSTYLASKINEAKELLLKG 245 TQ +RA HA+ ++EN ++ GL VAG+AL +Y L+ +N ++++ SS + FY+G FE+KMTRREAALILGVRESAS +RI+ AHR++L+LNHPDTGGST+LA+KIN+AKELLL G Sbjct: 33 TQTLSLRAFHASPQRENTALIAGLGVAGAALSAKYALQVWNAYKSR---------------------PKSEQISSWKYRNFYDGPFEEKMTRREAALILGVRESASEERIRNAHRKLLILNHPDTGGSTFLATKINQAKELLLNG 156
BLAST of NO12G01620 vs. NCBI_GenBank
Match: GAX26886.1 (DnaJ homolog subfamily C member 19 [Fistulifera solaris]) HSP 1 Score: 127.9 bits (320), Expect = 4.400e-26 Identity = 88/154 (57.14%), Postives = 113/154 (73.38%), Query Frame = 0 Query: 106 IRALHATRRKEN---IMVGGLVVAGSALVLQYGLKAYNQWQA---KKXXXXXXXXXXXXXXXXXXXXXXXXXXSSLFAK--------RFYEGGFEDKMTRREAALILGVRESASPQRIKEAHRRILMLNHPDTGGSTYLASKINEAKELLLKGK 246 I + H++ E I++G V+ ++ G+KAYN+W+A ++ XXXXXXXXXXXXXXXXX ++FAK ++YEGGFE++MTRREAALILGVRES+SP RIKEAHR++L+LNHPDTGGSTY+A K+NEAKELLLKGK Sbjct: 71 IASFHSSSANEKAVAIILGLGAVSAASYAAASGIKAYNEWKASLPEEPPEIEKXXXXXXXXXXXXXXXXXGDRENIFAKWFGASVGAKYYEGGFEEEMTRREAALILGVRESSSPARIKEAHRKLLVLNHPDTGGSTYIAGKLNEAKELLLKGK 224 The following BLAST results are available for this feature:
BLAST of NO12G01620 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO12G01620 ID=NO12G01620|Name=NO12G01620|organism=Nannochloropsis oceanica|type=gene|length=1200bpback to top protein sequence of NO12G01620.1 >NO12G01620.1-protein ID=NO12G01620.1-protein|Name=NO12G01620.1|organism=Nannochloropsis oceanica|type=polypeptide|length=247bpback to top Synonyms
Publications
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