NO12G01600, NO12G01600 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO12G01600 vs. NCBI_GenBank
Match: EJK68451.1 (hypothetical protein THAOC_10367 [Thalassiosira oceanica]) HSP 1 Score: 120.2 bits (300), Expect = 3.800e-24 Identity = 51/100 (51.00%), Postives = 69/100 (69.00%), Query Frame = 0 Query: 1 MYGIRRYPAGSRLMKHGDMISTHAVSAIINVAQEGILEEWPLQIHDHQGVEHSIVMQPGEAVFYESVSCIHGHETPLKNGTYANLFVHYRPT--EGWYYK 99 +YGIR+Y G+RL+ H D I+THAVS I+N+AQ + W ++++DH H +VM+PG+ V+YES +HG TPLK G YAN+F HYRPT WY K Sbjct: 335 LYGIRQYTEGARLLTHVDRITTHAVSLIVNIAQGNVTSPWTVEVYDHADRLHEVVMEPGDIVYYESAKALHGRNTPLKGGYYANIFTHYRPTGDPSWYKK 434
BLAST of NO12G01600 vs. NCBI_GenBank
Match: XP_009033934.1 (hypothetical protein AURANDRAFT_70898 [Aureococcus anophagefferens] >EGB11582.1 hypothetical protein AURANDRAFT_70898 [Aureococcus anophagefferens]) HSP 1 Score: 118.2 bits (295), Expect = 1.500e-23 Identity = 54/95 (56.84%), Postives = 68/95 (71.58%), Query Frame = 0 Query: 1 MYGIRRYPAGSRLMKHGDMISTHAVSAIINVAQEGILEEWPLQIHDHQGVEHSIVMQPGEAVFYESVSCIHGHETPLKNGTYANLFVHYRPTEGW 96 +YGIRRY GS L H D+++THAVSAI+NV Q+ + E+WPLQI DH G H++VM+PGE V YES IHG PL +Y N+FVH+RP GW Sbjct: 1744 VYGIRRYTNGSTLQAHVDVVATHAVSAILNVDQD-VDEDWPLQIRDHGGDVHAVVMKPGEMVLYESSKSIHGRLVPLNGASYDNIFVHFRPRLGW 1837
BLAST of NO12G01600 vs. NCBI_GenBank
Match: EJK59131.1 (hypothetical protein THAOC_20685 [Thalassiosira oceanica]) HSP 1 Score: 117.1 bits (292), Expect = 3.200e-23 Identity = 50/100 (50.00%), Postives = 68/100 (68.00%), Query Frame = 0 Query: 1 MYGIRRYPAGSRLMKHGDMISTHAVSAIINVAQEGILEEWPLQIHDHQGVEHSIVMQPGEAVFYESVSCIHGHETPLKNGTYANLFVHYRPTE--GWYYK 99 MYG+R Y G+RL+ H D STHA S I+N+AQE + + W +++ DH H +VM+PGE V+YES +HG TPL++G Y NLF HYRPT+ WY + Sbjct: 367 MYGMREYTKGARLLTHVDRESTHAASMIVNIAQENVTKPWTIEVLDHADRLHEVVMEPGEIVYYESAKSLHGRNTPLQSGRYINLFTHYRPTDDPDWYLR 466
BLAST of NO12G01600 vs. NCBI_GenBank
Match: GAX27015.1 (hypothetical protein FisN_9Lh328 [Fistulifera solaris]) HSP 1 Score: 110.5 bits (275), Expect = 3.000e-21 Identity = 49/103 (47.57%), Postives = 66/103 (64.08%), Query Frame = 0 Query: 1 MYGIRRYPAGSRLMKHGDMISTHAVSAIINVAQEGILEEWPLQIHDHQGVEHSIVMQPGEAVFYESVSCIHGHETPL--KNGTYANLFVHYRPTE---GWYYK 99 MYG+R+Y G+RL+ H D +THAVS I+N+AQ + E WP+++ DH H I+M+PG+ V+YES +HG P+ N Y NLF HYRP E WY K Sbjct: 324 MYGLRKYTEGARLLTHVDRRNTHAVSLIVNIAQGNLTEPWPVEVQDHMDRMHEILMEPGDIVYYESAKALHGRNRPMTGPNSYYVNLFTHYRPVEDADDWYKK 426
BLAST of NO12G01600 vs. NCBI_GenBank
Match: GAX24077.1 (hypothetical protein FisN_9Hh328 [Fistulifera solaris]) HSP 1 Score: 110.5 bits (275), Expect = 3.000e-21 Identity = 49/103 (47.57%), Postives = 66/103 (64.08%), Query Frame = 0 Query: 1 MYGIRRYPAGSRLMKHGDMISTHAVSAIINVAQEGILEEWPLQIHDHQGVEHSIVMQPGEAVFYESVSCIHGHETPL--KNGTYANLFVHYRPTE---GWYYK 99 MYG+R+Y G+RL+ H D +THAVS I+N+AQ + E WP+++ DH H I+M+PG+ V+YES +HG P+ N Y NLF HYRP E WY K Sbjct: 311 MYGLRKYTEGARLLTHVDRRNTHAVSLIVNIAQGNLTEPWPVEVQDHMDRMHEILMEPGDIVYYESAKALHGRNRPMTGPNSYYVNLFTHYRPVEDADDWYKK 413
BLAST of NO12G01600 vs. NCBI_GenBank
Match: XP_009034843.1 (hypothetical protein AURANDRAFT_62497 [Aureococcus anophagefferens] >EGB09997.1 hypothetical protein AURANDRAFT_62497 [Aureococcus anophagefferens]) HSP 1 Score: 105.9 bits (263), Expect = 7.400e-20 Identity = 45/94 (47.87%), Postives = 60/94 (63.83%), Query Frame = 0 Query: 2 YGIRRYPAGSRLMKHGDMISTHAVSAIINVAQEGILEEWPLQIHDHQGVEHSIVMQPGEAVFYESVSCIHGHETPLKNGTYANLFVHYRPTEGW 96 YG+R Y G+ L H D +TH VS I+NVAQ G+ E WPL+I DH G H++ M+PG+ + YES +HG P + +YAN+FVHY P W Sbjct: 405 YGVRTYERGAYLHLHVDTANTHVVSGIMNVAQAGVDEPWPLEILDHAGKLHAVNMEPGDFLLYESARLLHGRPRPFRGDSYANIFVHYMPEHDW 498
BLAST of NO12G01600 vs. NCBI_GenBank
Match: XP_023343650.1 (uncharacterized protein LOC111713088 [Eurytemora affinis]) HSP 1 Score: 103.6 bits (257), Expect = 3.700e-19 Identity = 47/97 (48.45%), Postives = 65/97 (67.01%), Query Frame = 0 Query: 1 MYGIRRYPAGSRLMKHGDMISTHAVSAIINVAQEGILEEWPLQIHDHQGVEHSIVMQPGEAVFYESVSCIHGHETPLKNGTYANLFVHYRPTE-GWY 97 +YG+R+Y G+ L H D + TH VSAI+N+AQ+ + E+WPLQI DHQG ++ I++ PG+ V+YES IH P K +Y N+FVHY P WY Sbjct: 86 VYGLRKYTRGAWLHAHLDHLRTHVVSAILNIAQD-VDEDWPLQIEDHQGNKYEIILAPGDMVWYESAKLIHARIKPFKGRSYENIFVHYMPRSLNWY 181
BLAST of NO12G01600 vs. NCBI_GenBank
Match: PCI87991.1 (proline hydroxylase [Rhizobiales bacterium]) HSP 1 Score: 102.8 bits (255), Expect = 6.300e-19 Identity = 46/91 (50.55%), Postives = 60/91 (65.93%), Query Frame = 0 Query: 1 MYGIRRYPAGSRLMKHGDMISTHAVSAIINVAQEGILEEWPLQIHDHQGVEHSIVMQPGEAVFYESVSCIHGHETPLKNGTYANLFVHYRP 92 +YGIR Y G++L H D + TH +S IIN+ Q+ + E+WPLQI DH H IVMQPG+ VFYE HG E PLK +AN+F H++P Sbjct: 376 VYGIRTYNEGAKLRAHRDRLDTHIISCIINIYQD-VDEDWPLQIDDHHYRTHDIVMQPGDMVFYEGARLQHGREIPLKGRAFANIFCHFKP 465
BLAST of NO12G01600 vs. NCBI_GenBank
Match: PCH47595.1 (proline hydroxylase [Alphaproteobacteria bacterium]) HSP 1 Score: 102.4 bits (254), Expect = 8.200e-19 Identity = 46/91 (50.55%), Postives = 60/91 (65.93%), Query Frame = 0 Query: 1 MYGIRRYPAGSRLMKHGDMISTHAVSAIINVAQEGILEEWPLQIHDHQGVEHSIVMQPGEAVFYESVSCIHGHETPLKNGTYANLFVHYRP 92 +YGIR Y G++L H D + TH VS IIN+ Q+ + E+WPLQI DH H IV+QPG+ VFYE HG E PLK +AN+F H++P Sbjct: 376 VYGIRTYNEGAKLRAHRDRLDTHIVSCIINIYQD-VDEDWPLQIDDHHYRTHDIVLQPGDMVFYEGARLQHGREVPLKGRAFANIFCHFKP 465
BLAST of NO12G01600 vs. NCBI_GenBank
Match: ETO11666.1 (hypothetical protein RFI_25710 [Reticulomyxa filosa]) HSP 1 Score: 101.7 bits (252), Expect = 1.400e-18 Identity = 47/102 (46.08%), Postives = 64/102 (62.75%), Query Frame = 0 Query: 1 MYGIRRYPAGSRLMKHGDMISTHAVSAIINV---AQEGILEEWPLQIHDHQGVEHSIVMQPGEAVFYESVSCIHGHETPLKNGTYANLFVHYRPTEGWYYKY 100 +YGIR Y G+ L H D TH +SAIINV +G ++WPLQI+DH+G H M+PG+ +FYES C H PL YAN+F+H++PT+ Y+ Y Sbjct: 110 LYGIRMYTRGAILGMHVDTCGTHVISAIINVDSKLDQG--KDWPLQIYDHEGTLHEFTMKPGDVMFYESAKCGHSRFKPLPGEYYANIFIHFKPTDPIYWNY 209 The following BLAST results are available for this feature:
BLAST of NO12G01600 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO12G01600 ID=NO12G01600|Name=NO12G01600|organism=Nannochloropsis oceanica|type=gene|length=306bpback to top protein sequence of NO12G01600.1 >NO12G01600.1-protein ID=NO12G01600.1-protein|Name=NO12G01600.1|organism=Nannochloropsis oceanica|type=polypeptide|length=102bpback to top Synonyms
Publications
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