NO12G01540, NO12G01540 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO12G01540 vs. NCBI_GenBank
Match: XP_005856101.1 (hypothetical protein NGA_0332100 [Nannochloropsis gaditana CCMP526] >EKU20237.1 hypothetical protein NGA_0332100 [Nannochloropsis gaditana CCMP526] >EWM25879.1 hypothetical protein Naga_100054g15 [Nannochloropsis gaditana]) HSP 1 Score: 1525.4 bits (3948), Expect = 0.000e+0 Identity = 739/982 (75.25%), Postives = 838/982 (85.34%), Query Frame = 0 Query: 1 MARLLSTSRIATLLMVVTLPAWNIQPDNPYKLSSGVVDAVDAS-------SLMAGASAIAKGLAASKGTS--MSGVSPGLAAEIENDLSVNDAPAVNQGSTVGGPVMNMG--RGSGTSLGDGLTWNFGSKGMIDMMTGFFMTFMTGTSNPDSALNVYGSAFTSQDPEEISAAFGKLLTSLDMTCAFQMTSGGDGVDMKFRDGKEALHIQYVPTTSATVFNFKGEFPQSRAFSYATYAVANQKVTYVDMIADTDIVPATGVNPFVAGPSVTGASGTYDLYVTPDGKEGFPNELKSFAHGSAPSELSGLIIVYRVIMADGIRADGWGGVPPPTLRVKAFSVLATGLWMNLAPCNPKNDATIQRFLDDKLTLQEGFSDVKVECDVFNMDNNFVYYDDAQYFKTPDENHVISCGNRALLPSGSDMITIISGTIPPASDSRYSSISLVNLYPPGKNVYTVSDQSLRNFYWDQGKSAVNYTIIMAKNKLALNKCGLSKLPSNWYQVYWSGFTDAVDGSYPGIVYREVMTNGNEQSLEQVRYACEAEKDCSNPRFFEHQMREFYPRISYLSCSTAGLAPAPVGNANLTFPEPRLPTPAFQGLWTAIAGEDVLGLETTPKASVNVAALQGSDVYVNGKLAGRATDNPKVVSKQTAEFGWSPIQAVYYDPENPVTAEPVVRSYIDNDGTEVQVELVPTPANFMPEEVTLAIKVPVTEA-KAFFATHDVCGTSKSSAAGWKCKATTFAHGDTNWTLATFDDTAWLPAKALKKGDACNAMSMDCTTLPADAQGIWADTCTASDGPNQGFVYCRLTVPQTCDMSGMGGSDDRVKTWCPDTANAVATARFASPTLNWLYANGQEVGGEQSMINSAGTTSFALDQNAPTIVLAFKAVDDTRKTVRSFIKGQFNLCGYEYVTDASWRCAITEPFTHDWTLPGFDDSKWNPVRIVDGFPWQPAPSAGMSPEASWVWAQEGTQTFCRLEVPNPVFEGLQ 971 MARL STS A LL++V+ W + SG+ A +++ + + GASAIAKGLA + T S S G I++DL + P + + V G G GTSLGDGL+WNFGSKGMI M+TGFFMTFM+G++NP+SALNVYGSA SQDP EISAAFGKLLTSLDM+CAFQMTSGGDGVDMKFRDGKEALHIQ+VPTT ATVFNFKGEFP+SRAFSYATYAVANQ+V++VDMI+D D+V +TG NPF AGP TGASG+YDLYVTPDGK+GFPNE+K+FA G +ELSG+IIVYRVIMADGI++DGWGGVPPP LRVKAFSVLATGLW NLAPCNPKND TI+ F++++L L+EG SDVKVECDVFNMDNNFVYYDDAQYFKTPDENH+ISCGNRALLP G+DMITIISGT+PPASDSRY+SISLVNLYPPG+NVY+VSDQSLRNFYWDQGKSAVNYTIIMAKNKLALNKCGLSKLP+NWYQVYW+GF DA++GSYPGIVYRE+MT+G EQSLEQVRYACEAEKDCSNP+FFE QM ++YPRISYLSCS++GLAPAP+ N NLTFPEPRLP PAFQGLWT++AG D+LG+E+ P+ASV +AALQGSDVYVNGKLAGRATDN KVVSKQTA FGWSPIQ+VYYDPENPVTA PV+R Y+D DG VQ+ELVPTPA F+P+EV A+KVP+T KAFFATHDVCGTS+SSAAGWKC ATTF D NWTL +FDD+ WLPAKALKKG+AC+ M DCT LP DAQGIWADTCT S GPNQG VYCRL VPQTCD++ GSDDRVKTWCPD ANAVATARFASPTL+WLYANG EVGG+Q+M+ AGTTSFALD APT+VLAFKAVDDTRK V+SFIKGQFNLCG+E+VTDASWRCA +EPFT DW PGFDDS+W+PVR+VDGFPWQP PSAGMSPE+SWVWAQ G QTFCRLEVPNPV+ Q Sbjct: 1 MARLCSTSVSAVLLLLVSNSGWTAGKTELRQTFSGLAQAAESNPGNQFGGAFLNGASAIAKGLAGNAATDNIPSSTSAGATDIIKDDLGPDVLPTPPENNNVANKASLGGLVGGPGTSLGDGLSWNFGSKGMIQMLTGFFMTFMSGSANPNSALNVYGSALMSQDPVEISAAFGKLLTSLDMSCAFQMTSGGDGVDMKFRDGKEALHIQFVPTTKATVFNFKGEFPKSRAFSYATYAVANQQVSFVDMISDVDMVASTGSNPFTAGPGNTGASGSYDLYVTPDGKQGFPNEIKTFADGDVTNELSGIIIVYRVIMADGIKSDGWGGVPPPALRVKAFSVLATGLWFNLAPCNPKNDITIENFIENRLALKEGMSDVKVECDVFNMDNNFVYYDDAQYFKTPDENHIISCGNRALLPPGADMITIISGTLPPASDSRYASISLVNLYPPGRNVYSVSDQSLRNFYWDQGKSAVNYTIIMAKNKLALNKCGLSKLPANWYQVYWAGFADALEGSYPGIVYREMMTDGYEQSLEQVRYACEAEKDCSNPKFFEQQMGDYYPRISYLSCSSSGLAPAPIKNENLTFPEPRLPRPAFQGLWTSLAGNDLLGVESIPQASVTMAALQGSDVYVNGKLAGRATDNVKVVSKQTASFGWSPIQSVYYDPENPVTANPVIREYMDADGNPVQLELVPTPAKFLPDEVLFAVKVPITGGLKAFFATHDVCGTSRSSAAGWKCIATTFP--DANWTLPSFDDSKWLPAKALKKGEACSGMPTDCTALPPDAQGIWADTCTGSGGPNQGNVYCRLRVPQTCDLTARAGSDDRVKTWCPDLANAVATARFASPTLHWLYANGLEVGGDQTMVIPAGTTSFALDPAAPTVVLAFKAVDDTRKVVKSFIKGQFNLCGFEHVTDASWRCAPSEPFTDDWLQPGFDDSEWDPVRVVDGFPWQPNPSAGMSPESSWVWAQSGIQTFCRLEVPNPVYGAKQ 980
BLAST of NO12G01540 vs. NCBI_GenBank
Match: EWM22223.1 (hypothetical protein Naga_100312g6 [Nannochloropsis gaditana]) HSP 1 Score: 156.4 bits (394), Expect = 4.600e-34 Identity = 121/461 (26.25%), Postives = 198/461 (42.95%), Query Frame = 0 Query: 159 SAAFGKLLTSLDMTCAFQMTSGGDGVDMKFRDGKEALHIQYVPTTSA--TVFNFKGEFPQSRAFSYATYAVANQKVTYVDMIADTDIVPATGVNPFVAGPSVTGASGTYDLYVTPDGKEGFPNELKSFAHGSAPSELSGLIIVYRVIMADGIRADGWGGVPPPTLRVKAFSVLA--TGLWMNLAPCNPKNDATIQRFLDDKLTLQEGFSDVKV--------ECDVFNMDNNFVYYDDAQYFKTPDENHVISCGNRALLPSGSDMITIISGTIPPA---------------SDSRYSSISLVNLYPPGKNVYTVSDQSLRNFY---------WDQGKSAVNYTIIMAKNKLALNKCGLSKLPSNWYQVYWSGFTDAVDGSYPGIVYREVM--------TNGNEQSLEQVRYACEA----EKDCSNPRFFEHQMREFYPRISYLSCSTAGLAPAPVGNANLTF 572 S A L S++ CA+Q S G ++ F DG H+ +VP V +G++P R FSY +Y + + V + D +I GVNPF + G G Y ++VT +G +G+PNEL + A GS + L+ VY + D WG V PP ++ K F+ + GLW L C P N +F+ T+ G+S V C +N + F+ Q +++ +I+GT+PP+ S++RY S+S +L PG + T+ D + +FY W+ +++ Y I+ A + + +CG + ++ S + SYP +V RE++ T N QS+ ++ ACE+ C F M+ FYP+++Y C G + A N + T+ Sbjct: 30 SYALAGLNASIEFNCAWQ-ASVGLNFNIAFPDGYAVYHVLFVPKLQGPMDVIRIEGDYPFVRYFSYQSY--DPKSLDPVASVRDYEIKSVRGVNPFATPGTTLGDKGKYQVHVTLNGDQGYPNELPTIASGSNATGAFVLLRVYAYDKQSPDKTDIWGAVAPPVVKYKLFNPSSGQGGLWYTLDQCTPNNTKIASQFIS---TIATGYSRVLATENKAGANPCPTWNSRDQFLDGGGVQ----------------------GNLVAVITGTLPPSPGGLWTPPFVADFTKSNARYLSLSTYDLNIPGPVLQTLFDSDIVDFYSQYYGSEYLWNL-RNSRQYKIVAAADLASAKRCGHLTRDA----MFLSTWGQTARVSYPALVLREILSQSSRIGDTANNTQSIHNIKQACESIAGVGAKCETSSFASSVMKNFYPKVTYYDCLQGGKSVAAPYNQSATY 457
BLAST of NO12G01540 vs. NCBI_GenBank
Match: XP_005854425.1 (hypothetical protein NGA_0235800 [Nannochloropsis gaditana CCMP526] >EKU21938.1 hypothetical protein NGA_0235800 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 129.4 bits (324), Expect = 6.000e-26 Identity = 111/453 (24.50%), Postives = 183/453 (40.40%), Query Frame = 0 Query: 159 SAAFGKLLTSLDMTCAFQMTSGGDGVDMKFRDGKEALHIQYVPTTSA--TVFNFKGEFPQSRAFSYATYAVANQKVTYVDMIADTDIVPATGVNPFVAGPSVTGASGTYDLYVTPDGKEGFPNELKSFAHGSAPSELSGLIIVYRVIMADGIRADGWGGVPPPTLRVKAFSVLA--TGLWMNLAPCNPKNDATIQRFLDDKLTLQEGFSDVKVECDVFNMDNNFVYYDDAQYFKTPDENHVISCGNRALLPSGSDMITIISGTIPPA---------------SDSRYSSISLVNLYPPGKNVYTVSDQSLRNFY---------WDQGKSAVNYTIIMAKNKLALNKCGLSKLPSNWYQVYWSGFTDAVDGSYPGIVYREVM--------TNGNEQSLEQVRYACEA----EKDCSNPRFFEHQMREFYPRISYLSCSTAGLAPAPVGNANLTF 572 S A L S++ CA+Q S G ++ F DG H+ +VP V +G++P R FSY +Y + + V + D +I GVNPF + G G Y ++VT +G +G+PNEL + A GS + L+ VY + D WG V PP ++ K F+ + GLW L + F V+ +++ +I+GT+PP+ S++RY S+S +L PG + T+ D + +FY W+ +++ Y I+ A + + +CG + ++ S + SYP +V RE++ T N QS+ ++ ACE+ C F M+ FYP+++Y C G + A N + T+ Sbjct: 176 SYALAGLNASIEFNCAWQ-ASVGLNFNIAFPDGYAVYHVLFVPKLQGPMDVIRIEGDYPFVRYFSYQSY--DPKSLDPVASVRDYEIKSVRGVNPFATPGTTLGDKGKYQVHVTLNGDQGYPNELPTIASGSNATGAFVLLRVYAYDKQSPDKTDIWGAVAPPVVKYKLFNPSSGQGGLWYTL----------------------DQFDGGGVQ---------------------------------------GNLVAVITGTLPPSPGGLWTPPFVADFTKSNARYLSLSTYDLNIPGPVLQTLFDSDIVDFYSQYYGSEYLWNL-RNSRQYKIVAAADLASAKRCGHLTRDA----MFLSTWGQTARVSYPALVLREILSQSSRIGDTANNTQSIHNIKQACESIAGVGAKCETSSFASSVMKNFYPKVTYYDCLQGGKSVAAPYNQSATY 559
BLAST of NO12G01540 vs. NCBI_GenBank
Match: EWM26805.1 (protein of unknown function DUF1214 [Nannochloropsis gaditana]) HSP 1 Score: 119.0 bits (297), Expect = 8.100e-23 Identity = 104/465 (22.37%), Postives = 193/465 (41.51%), Query Frame = 0 Query: 168 SLDMTCAFQMTSGGDGVDMKFRDGKEALHIQYVPTTS-ATVFNFKGEFPQSRAFSYATYAVANQKVTYVDMIADTDIVPATGVNPFVAGPSVTGASGTYDLYVTPDGKEGFPNELKSFAHGSAPSELSGLII-----VYRVIMADGIRADGWGGVPPPTLRVKAFSVLATGL----WMNLAPCNPKNDATIQRFLDDKLT---LQEGFSDVKVECDVFNMDNNFVYYDDAQY------FKTPDENHVISCGN-RALLPSGSDMITIISGTIP--PAS-------------DSRYSSISLVNLYPPGKNVYTVSDQSLRNFY--------WDQGKSAVNYTIIMAKNKLALNKC--------------------GLSKLPSNWYQVYW----------SGFTDAVDGSYPGIVYREVMTNGNEQSLEQVRYACEAEKDCSNPRFFEHQMREFYPRISYLSCSTAGL 560 +++ CA+ ++ ++ F D + H+ P + + +GEFP SR FS TY ++ + + + D ++VP+ GVN F + G + + ++ DG GFPNEL G+ S +G ++ V + + + WG PPT+ ++ L W + C N I + + + +Q F + V C + N+ + F+ + F D ++++C N R +D+I +++ +P P S D RY+S+S+ +L PPG + T D +R+FY W++G N ++++A N+ AL++C G P W+ + + +G A G +Y+ + + E + C+ NP M+E YPR+S+ +CS +G+ Sbjct: 217 AIETDCAWTASADYQTANLFFPDAQSVYHLMVFPNFGPSDLAMIEGEFPDSRYFSVQTY---DENFSPIAGLKDLEVVPSEGVNSFARKSPLQIRDGRFKIVLSKDGNRGFPNEL-PINVGNFSSTTTGYVMMRMYGVDPLAKTNANKLAKWGYKDPPTISLRTAGSLTPTTWDQGWKKMPLCPDTNAEIITKAVTTAVNSRLIQMNFKEDSVSCSIENVKDGFMLMSRERASSSRAPFVNADGGYLMACANSRPEYIKNNDLIAVVNTFLPSTPYSKFKARFIGSPETYDMRYASLSVYDLRPPGPVLRTFPDAEIRDFYYDLYGAELWEEGFQR-NVSMVVASNQAALDRCKVDTSESLILTLDDLEEQASGEPTSPPEWWSIVYRELIPQSQIINGTNAASYGMKEQDIYKTSIQDAREIMCGENGDTCD-----RNPYRAASIMKEHYPRVSWYTCSPSGV 671
BLAST of NO12G01540 vs. NCBI_GenBank
Match: EWM29475.1 (hypothetical protein Naga_100128g9 [Nannochloropsis gaditana]) HSP 1 Score: 93.6 bits (231), Expect = 3.700e-15 Identity = 94/395 (23.80%), Postives = 167/395 (42.28%), Query Frame = 0 Query: 207 VFNFKGEFPQSRAFSYATYAVANQKVTYVDMIADTDIVPATGVNPFVAGPSVTGASGTYDLYVTPDGKEGFPNELKSFA--HGSAPSE--------LSGLIIVYRVIMADGIRADGWGGVPPPTLRVKAFSVLATGLWMNLAPCNPKNDATIQRFLDDKLTLQEGFSDVKVECDVFNMDNNFVYYDDAQYFKTPDENHVIS---CGNRALLPS-----GSDMITIISGTIPPAS----------------DSRYSSISLVNLYPPGKNVYTVSDQSLRNFY---WDQGKSAVNYTIIMAKNKLALNKCGLSKLPSNWYQVYWSGFTDAVDGSYPGIVYREVMTN-------GNEQSLEQVRYACEAEKDCSNPRFFEHQMREFYPRISYLSCSTA 558 V+ FP+ FSY TY++ +T + D I P+ G NP+ + GA GTY++YVT DG +G+PNE++ + H +A + L +V + WGGV P + +++ W L PC +D T R+ ++ Q G++ D ++ Y +Q+++ H++S + AL P G + + +I GT P + +RY S + +++ PG +++ Q + NFY WD+ Y I+ A + + CGL P + Y + + + P ++ RE++ ++QS+E V C E C + F + + + YP + +C A Sbjct: 54 VYKISASFPRVVYFSYETYSLRGHPLT---SLPDLRIDPSWGKNPYREETTEEGA-GTYEIYVTRDGNKGWPNEVRGLSEDHTNATQAAFSRVMDFVDNLSVVMLRLYTTEQPPSVWGGVDRPVI---SYTDDLGQTWKELQPC---SDTT--RYQFNRAMRQIGWT---------VYDFRYLIY-HSQWYRL-RSCHLLSKREADHPALFPDVNVQLGGNFVMVIEGTAPLTATGLFEGPRPVWNVTNYSTRYWSFAAADVFVPGPTYSSLTAQDMENFYGKGWDR-----RYKIVGATSIDIVKACGLDD-PHALFLPYKNELMNNNPPAVPAVIEREMLARHMAMGLPSDKQSIEYVTSNCGKENKCLSIDFMKASLGDQYPSLQVYTCDVA 419
BLAST of NO12G01540 vs. NCBI_GenBank
Match: EWM21339.1 (hypothetical protein Naga_100075g21 [Nannochloropsis gaditana]) HSP 1 Score: 89.7 bits (221), Expect = 5.300e-14 Identity = 93/411 (22.63%), Postives = 159/411 (38.69%), Query Frame = 0 Query: 201 PTTSATVFNFKGEFPQSRAFSYATYAVANQKVTYVDMIADTDIVPATGVNPFVAGPSVTGASGTYDLYVTPDGKEGFPNELKSFAHGSAPSELSGLIIVYRVIMAD---GIRADG----WGGVPPPTLRVKAFSVLATGLWMNLAPCNPKNDATIQRFLDD---------KLTLQEGFSDVKVECDVFNMDNNFVYYDDAQYFKTPDENHVISCGNRALLPSGSDMITIISGTIPPAS---------------DSRYSSISLVNLYPPGKNVYTVSDQSLRNFY--------WDQGKSAVNYTIIMAKNKLALNKCGLSKLPSNWYQVYWSGFTDAVDGSYPGIVYREVMTNGNEQ-------SLEQVRYACEAEKD---CSNPRFFEHQMREFYPRISYLSCSTAGLAPA 563 P V+ +G+FP R FS+ Y + Q ++ + DTDI P++G NPF GTY++YV+ DG +G+PNE+ + S ++ +R+ + D G G WG V P + + G W + C+ + A + +++ LQ G E +F+ + N + + +EN++ C + + D I I+G +P DSRY S + + P + T+ D+ + N Y WD+ Y ++ + KCGL + T P IV R ++ G ++ + +R CE+ C R + ++EFYP + +C L PA Sbjct: 152 PHKEEEVYRIRGKFPYVRYFSFTVYDASLQSIS---TLHDTDIRPSSGKNPFNDIEVTEDNMGTYEIYVSKDGSKGYPNEMAALRPDSTSPY---ALLAFRLQLLDPRAGEDRSGKNREWGYVDMPLVEILNH---RNGEWDIIRRCSDEFQARTEEVIENLDLTFNTWWPKNLQIGTECNATEFSLFDPEQNPIIRRGVA-VRNANENYIFWCMPKEI--GKKDYIIRITGKLPRTPYGLFDDIRVADTARYDSRYVSFTSADAIPLYPSYETIHDRDIFNHYSTDPFGSDWDR-----MYNLVATSDVNLAKKCGLYNRAEDVLLQLTRSPTFTHLPHVPAIVMRHLLPGGGKERRGTEGVANVNLRNECESPTGKLLCDPARSAKVLLQEFYPLVQIWTCDYQNLKPA 545
BLAST of NO12G01540 vs. NCBI_GenBank
Match: EWM22030.1 (hypothetical protein Naga_100052g19 [Nannochloropsis gaditana]) HSP 1 Score: 70.9 bits (172), Expect = 2.500e-8 Identity = 49/158 (31.01%), Postives = 65/158 (41.14%), Query Frame = 0 Query: 823 ARFASPTLNWLYANGQEVGGEQSMINSAGTTSFALDQNAPTIVLAFK-----------AVDDTRKTVRSFIKGQFNLCGYEYVTDASWRCAITEPFTHDWTLPGFDDSKW-NPVRI-VDGFPW------QPAPSAGMSPEASWVWAQEGTQTFCRLEV 962 A SP W + NGQ + N +S AL QN ++ L K AV+ + V + +F++CG + TD SW C P W+ P FDDS W N VR+ G P P S+ SP W +TFCR V Sbjct: 61 AEVMSPCNMWAFVNGQSLDASMGFGNGPTHSSMALPQNTSSVTLVLKSFCTPFSFPVSAVEGS--PVHPMVAAKFDVCGTDVKTDESWVCINHFPEEGSWSSPDFDDSAWPNAVRVEASGLPTGFTYIAGPTESSDDSPHGGW-------ETFCRKTV 209
BLAST of NO12G01540 vs. NCBI_GenBank
Match: EWM22031.1 (hypothetical protein Naga_100052g19 [Nannochloropsis gaditana]) HSP 1 Score: 70.9 bits (172), Expect = 2.500e-8 Identity = 49/158 (31.01%), Postives = 65/158 (41.14%), Query Frame = 0 Query: 823 ARFASPTLNWLYANGQEVGGEQSMINSAGTTSFALDQNAPTIVLAFK-----------AVDDTRKTVRSFIKGQFNLCGYEYVTDASWRCAITEPFTHDWTLPGFDDSKW-NPVRI-VDGFPW------QPAPSAGMSPEASWVWAQEGTQTFCRLEV 962 A SP W + NGQ + N +S AL QN ++ L K AV+ + V + +F++CG + TD SW C P W+ P FDDS W N VR+ G P P S+ SP W +TFCR V Sbjct: 47 AEVMSPCNMWAFVNGQSLDASMGFGNGPTHSSMALPQNTSSVTLVLKSFCTPFSFPVSAVEGS--PVHPMVAAKFDVCGTDVKTDESWVCINHFPEEGSWSSPDFDDSAWPNAVRVEASGLPTGFTYIAGPTESSDDSPHGGW-------ETFCRKTV 195 The following BLAST results are available for this feature:
BLAST of NO12G01540 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 8
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO12G01540 ID=NO12G01540|Name=NO12G01540|organism=Nannochloropsis oceanica|type=gene|length=2928bpback to top protein sequence of NO12G01540.1 >NO12G01540.1-protein ID=NO12G01540.1-protein|Name=NO12G01540.1|organism=Nannochloropsis oceanica|type=polypeptide|length=976bpback to top Synonyms
Publications
|