NO12G01540, NO12G01540 (gene) Nannochloropsis oceanica

Overview
NameNO12G01540
Unique NameNO12G01540
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2928
Alignment locationchr12:470420..473347 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr12genomechr12:470420..473347 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
BLAST of NO12G01540 vs. NCBI_GenBank
Match: XP_005856101.1 (hypothetical protein NGA_0332100 [Nannochloropsis gaditana CCMP526] >EKU20237.1 hypothetical protein NGA_0332100 [Nannochloropsis gaditana CCMP526] >EWM25879.1 hypothetical protein Naga_100054g15 [Nannochloropsis gaditana])

HSP 1 Score: 1525.4 bits (3948), Expect = 0.000e+0
Identity = 739/982 (75.25%), Postives = 838/982 (85.34%), Query Frame = 0
Query:    1 MARLLSTSRIATLLMVVTLPAWNIQPDNPYKLSSGVVDAVDAS-------SLMAGASAIAKGLAASKGTS--MSGVSPGLAAEIENDLSVNDAPAVNQGSTVGGPVMNMG--RGSGTSLGDGLTWNFGSKGMIDMMTGFFMTFMTGTSNPDSALNVYGSAFTSQDPEEISAAFGKLLTSLDMTCAFQMTSGGDGVDMKFRDGKEALHIQYVPTTSATVFNFKGEFPQSRAFSYATYAVANQKVTYVDMIADTDIVPATGVNPFVAGPSVTGASGTYDLYVTPDGKEGFPNELKSFAHGSAPSELSGLIIVYRVIMADGIRADGWGGVPPPTLRVKAFSVLATGLWMNLAPCNPKNDATIQRFLDDKLTLQEGFSDVKVECDVFNMDNNFVYYDDAQYFKTPDENHVISCGNRALLPSGSDMITIISGTIPPASDSRYSSISLVNLYPPGKNVYTVSDQSLRNFYWDQGKSAVNYTIIMAKNKLALNKCGLSKLPSNWYQVYWSGFTDAVDGSYPGIVYREVMTNGNEQSLEQVRYACEAEKDCSNPRFFEHQMREFYPRISYLSCSTAGLAPAPVGNANLTFPEPRLPTPAFQGLWTAIAGEDVLGLETTPKASVNVAALQGSDVYVNGKLAGRATDNPKVVSKQTAEFGWSPIQAVYYDPENPVTAEPVVRSYIDNDGTEVQVELVPTPANFMPEEVTLAIKVPVTEA-KAFFATHDVCGTSKSSAAGWKCKATTFAHGDTNWTLATFDDTAWLPAKALKKGDACNAMSMDCTTLPADAQGIWADTCTASDGPNQGFVYCRLTVPQTCDMSGMGGSDDRVKTWCPDTANAVATARFASPTLNWLYANGQEVGGEQSMINSAGTTSFALDQNAPTIVLAFKAVDDTRKTVRSFIKGQFNLCGYEYVTDASWRCAITEPFTHDWTLPGFDDSKWNPVRIVDGFPWQPAPSAGMSPEASWVWAQEGTQTFCRLEVPNPVFEGLQ 971
            MARL STS  A LL++V+   W        +  SG+  A +++       + + GASAIAKGLA +  T    S  S G    I++DL  +  P   + + V       G   G GTSLGDGL+WNFGSKGMI M+TGFFMTFM+G++NP+SALNVYGSA  SQDP EISAAFGKLLTSLDM+CAFQMTSGGDGVDMKFRDGKEALHIQ+VPTT ATVFNFKGEFP+SRAFSYATYAVANQ+V++VDMI+D D+V +TG NPF AGP  TGASG+YDLYVTPDGK+GFPNE+K+FA G   +ELSG+IIVYRVIMADGI++DGWGGVPPP LRVKAFSVLATGLW NLAPCNPKND TI+ F++++L L+EG SDVKVECDVFNMDNNFVYYDDAQYFKTPDENH+ISCGNRALLP G+DMITIISGT+PPASDSRY+SISLVNLYPPG+NVY+VSDQSLRNFYWDQGKSAVNYTIIMAKNKLALNKCGLSKLP+NWYQVYW+GF DA++GSYPGIVYRE+MT+G EQSLEQVRYACEAEKDCSNP+FFE QM ++YPRISYLSCS++GLAPAP+ N NLTFPEPRLP PAFQGLWT++AG D+LG+E+ P+ASV +AALQGSDVYVNGKLAGRATDN KVVSKQTA FGWSPIQ+VYYDPENPVTA PV+R Y+D DG  VQ+ELVPTPA F+P+EV  A+KVP+T   KAFFATHDVCGTS+SSAAGWKC ATTF   D NWTL +FDD+ WLPAKALKKG+AC+ M  DCT LP DAQGIWADTCT S GPNQG VYCRL VPQTCD++   GSDDRVKTWCPD ANAVATARFASPTL+WLYANG EVGG+Q+M+  AGTTSFALD  APT+VLAFKAVDDTRK V+SFIKGQFNLCG+E+VTDASWRCA +EPFT DW  PGFDDS+W+PVR+VDGFPWQP PSAGMSPE+SWVWAQ G QTFCRLEVPNPV+   Q
Sbjct:    1 MARLCSTSVSAVLLLLVSNSGWTAGKTELRQTFSGLAQAAESNPGNQFGGAFLNGASAIAKGLAGNAATDNIPSSTSAGATDIIKDDLGPDVLPTPPENNNVANKASLGGLVGGPGTSLGDGLSWNFGSKGMIQMLTGFFMTFMSGSANPNSALNVYGSALMSQDPVEISAAFGKLLTSLDMSCAFQMTSGGDGVDMKFRDGKEALHIQFVPTTKATVFNFKGEFPKSRAFSYATYAVANQQVSFVDMISDVDMVASTGSNPFTAGPGNTGASGSYDLYVTPDGKQGFPNEIKTFADGDVTNELSGIIIVYRVIMADGIKSDGWGGVPPPALRVKAFSVLATGLWFNLAPCNPKNDITIENFIENRLALKEGMSDVKVECDVFNMDNNFVYYDDAQYFKTPDENHIISCGNRALLPPGADMITIISGTLPPASDSRYASISLVNLYPPGRNVYSVSDQSLRNFYWDQGKSAVNYTIIMAKNKLALNKCGLSKLPANWYQVYWAGFADALEGSYPGIVYREMMTDGYEQSLEQVRYACEAEKDCSNPKFFEQQMGDYYPRISYLSCSSSGLAPAPIKNENLTFPEPRLPRPAFQGLWTSLAGNDLLGVESIPQASVTMAALQGSDVYVNGKLAGRATDNVKVVSKQTASFGWSPIQSVYYDPENPVTANPVIREYMDADGNPVQLELVPTPAKFLPDEVLFAVKVPITGGLKAFFATHDVCGTSRSSAAGWKCIATTFP--DANWTLPSFDDSKWLPAKALKKGEACSGMPTDCTALPPDAQGIWADTCTGSGGPNQGNVYCRLRVPQTCDLTARAGSDDRVKTWCPDLANAVATARFASPTLHWLYANGLEVGGDQTMVIPAGTTSFALDPAAPTVVLAFKAVDDTRKVVKSFIKGQFNLCGFEHVTDASWRCAPSEPFTDDWLQPGFDDSEWDPVRVVDGFPWQPNPSAGMSPESSWVWAQSGIQTFCRLEVPNPVYGAKQ 980          
BLAST of NO12G01540 vs. NCBI_GenBank
Match: EWM22223.1 (hypothetical protein Naga_100312g6 [Nannochloropsis gaditana])

HSP 1 Score: 156.4 bits (394), Expect = 4.600e-34
Identity = 121/461 (26.25%), Postives = 198/461 (42.95%), Query Frame = 0
Query:  159 SAAFGKLLTSLDMTCAFQMTSGGDGVDMKFRDGKEALHIQYVPTTSA--TVFNFKGEFPQSRAFSYATYAVANQKVTYVDMIADTDIVPATGVNPFVAGPSVTGASGTYDLYVTPDGKEGFPNELKSFAHGSAPSELSGLIIVYRVIMADGIRADGWGGVPPPTLRVKAFSVLA--TGLWMNLAPCNPKNDATIQRFLDDKLTLQEGFSDVKV--------ECDVFNMDNNFVYYDDAQYFKTPDENHVISCGNRALLPSGSDMITIISGTIPPA---------------SDSRYSSISLVNLYPPGKNVYTVSDQSLRNFY---------WDQGKSAVNYTIIMAKNKLALNKCGLSKLPSNWYQVYWSGFTDAVDGSYPGIVYREVM--------TNGNEQSLEQVRYACEA----EKDCSNPRFFEHQMREFYPRISYLSCSTAGLAPAPVGNANLTF 572
            S A   L  S++  CA+Q  S G   ++ F DG    H+ +VP       V   +G++P  R FSY +Y    + +  V  + D +I    GVNPF    +  G  G Y ++VT +G +G+PNEL + A GS  +    L+ VY        + D WG V PP ++ K F+  +   GLW  L  C P N     +F+    T+  G+S V           C  +N  + F+     Q                       +++ +I+GT+PP+               S++RY S+S  +L  PG  + T+ D  + +FY         W+  +++  Y I+ A +  +  +CG     +    ++ S +      SYP +V RE++        T  N QS+  ++ ACE+       C    F    M+ FYP+++Y  C   G + A   N + T+
Sbjct:   30 SYALAGLNASIEFNCAWQ-ASVGLNFNIAFPDGYAVYHVLFVPKLQGPMDVIRIEGDYPFVRYFSYQSY--DPKSLDPVASVRDYEIKSVRGVNPFATPGTTLGDKGKYQVHVTLNGDQGYPNELPTIASGSNATGAFVLLRVYAYDKQSPDKTDIWGAVAPPVVKYKLFNPSSGQGGLWYTLDQCTPNNTKIASQFIS---TIATGYSRVLATENKAGANPCPTWNSRDQFLDGGGVQ----------------------GNLVAVITGTLPPSPGGLWTPPFVADFTKSNARYLSLSTYDLNIPGPVLQTLFDSDIVDFYSQYYGSEYLWNL-RNSRQYKIVAAADLASAKRCGHLTRDA----MFLSTWGQTARVSYPALVLREILSQSSRIGDTANNTQSIHNIKQACESIAGVGAKCETSSFASSVMKNFYPKVTYYDCLQGGKSVAAPYNQSATY 457          
BLAST of NO12G01540 vs. NCBI_GenBank
Match: XP_005854425.1 (hypothetical protein NGA_0235800 [Nannochloropsis gaditana CCMP526] >EKU21938.1 hypothetical protein NGA_0235800 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 129.4 bits (324), Expect = 6.000e-26
Identity = 111/453 (24.50%), Postives = 183/453 (40.40%), Query Frame = 0
Query:  159 SAAFGKLLTSLDMTCAFQMTSGGDGVDMKFRDGKEALHIQYVPTTSA--TVFNFKGEFPQSRAFSYATYAVANQKVTYVDMIADTDIVPATGVNPFVAGPSVTGASGTYDLYVTPDGKEGFPNELKSFAHGSAPSELSGLIIVYRVIMADGIRADGWGGVPPPTLRVKAFSVLA--TGLWMNLAPCNPKNDATIQRFLDDKLTLQEGFSDVKVECDVFNMDNNFVYYDDAQYFKTPDENHVISCGNRALLPSGSDMITIISGTIPPA---------------SDSRYSSISLVNLYPPGKNVYTVSDQSLRNFY---------WDQGKSAVNYTIIMAKNKLALNKCGLSKLPSNWYQVYWSGFTDAVDGSYPGIVYREVM--------TNGNEQSLEQVRYACEA----EKDCSNPRFFEHQMREFYPRISYLSCSTAGLAPAPVGNANLTF 572
            S A   L  S++  CA+Q  S G   ++ F DG    H+ +VP       V   +G++P  R FSY +Y    + +  V  + D +I    GVNPF    +  G  G Y ++VT +G +G+PNEL + A GS  +    L+ VY        + D WG V PP ++ K F+  +   GLW  L                      + F    V+                                        +++ +I+GT+PP+               S++RY S+S  +L  PG  + T+ D  + +FY         W+  +++  Y I+ A +  +  +CG     +    ++ S +      SYP +V RE++        T  N QS+  ++ ACE+       C    F    M+ FYP+++Y  C   G + A   N + T+
Sbjct:  176 SYALAGLNASIEFNCAWQ-ASVGLNFNIAFPDGYAVYHVLFVPKLQGPMDVIRIEGDYPFVRYFSYQSY--DPKSLDPVASVRDYEIKSVRGVNPFATPGTTLGDKGKYQVHVTLNGDQGYPNELPTIASGSNATGAFVLLRVYAYDKQSPDKTDIWGAVAPPVVKYKLFNPSSGQGGLWYTL----------------------DQFDGGGVQ---------------------------------------GNLVAVITGTLPPSPGGLWTPPFVADFTKSNARYLSLSTYDLNIPGPVLQTLFDSDIVDFYSQYYGSEYLWNL-RNSRQYKIVAAADLASAKRCGHLTRDA----MFLSTWGQTARVSYPALVLREILSQSSRIGDTANNTQSIHNIKQACESIAGVGAKCETSSFASSVMKNFYPKVTYYDCLQGGKSVAAPYNQSATY 559          
BLAST of NO12G01540 vs. NCBI_GenBank
Match: EWM26805.1 (protein of unknown function DUF1214 [Nannochloropsis gaditana])

HSP 1 Score: 119.0 bits (297), Expect = 8.100e-23
Identity = 104/465 (22.37%), Postives = 193/465 (41.51%), Query Frame = 0
Query:  168 SLDMTCAFQMTSGGDGVDMKFRDGKEALHIQYVPTTS-ATVFNFKGEFPQSRAFSYATYAVANQKVTYVDMIADTDIVPATGVNPFVAGPSVTGASGTYDLYVTPDGKEGFPNELKSFAHGSAPSELSGLII-----VYRVIMADGIRADGWGGVPPPTLRVKAFSVLATGL----WMNLAPCNPKNDATIQRFLDDKLT---LQEGFSDVKVECDVFNMDNNFVYYDDAQY------FKTPDENHVISCGN-RALLPSGSDMITIISGTIP--PAS-------------DSRYSSISLVNLYPPGKNVYTVSDQSLRNFY--------WDQGKSAVNYTIIMAKNKLALNKC--------------------GLSKLPSNWYQVYW----------SGFTDAVDGSYPGIVYREVMTNGNEQSLEQVRYACEAEKDCSNPRFFEHQMREFYPRISYLSCSTAGL 560
            +++  CA+  ++     ++ F D +   H+   P    + +   +GEFP SR FS  TY   ++  + +  + D ++VP+ GVN F     +    G + + ++ DG  GFPNEL     G+  S  +G ++     V  +   +  +   WG   PPT+ ++    L        W  +  C   N   I + +   +    +Q  F +  V C + N+ + F+     +       F   D  ++++C N R      +D+I +++  +P  P S             D RY+S+S+ +L PPG  + T  D  +R+FY        W++G    N ++++A N+ AL++C                    G    P  W+ + +          +G   A  G     +Y+  + +  E    +    C+      NP      M+E YPR+S+ +CS +G+
Sbjct:  217 AIETDCAWTASADYQTANLFFPDAQSVYHLMVFPNFGPSDLAMIEGEFPDSRYFSVQTY---DENFSPIAGLKDLEVVPSEGVNSFARKSPLQIRDGRFKIVLSKDGNRGFPNEL-PINVGNFSSTTTGYVMMRMYGVDPLAKTNANKLAKWGYKDPPTISLRTAGSLTPTTWDQGWKKMPLCPDTNAEIITKAVTTAVNSRLIQMNFKEDSVSCSIENVKDGFMLMSRERASSSRAPFVNADGGYLMACANSRPEYIKNNDLIAVVNTFLPSTPYSKFKARFIGSPETYDMRYASLSVYDLRPPGPVLRTFPDAEIRDFYYDLYGAELWEEGFQR-NVSMVVASNQAALDRCKVDTSESLILTLDDLEEQASGEPTSPPEWWSIVYRELIPQSQIINGTNAASYGMKEQDIYKTSIQDAREIMCGENGDTCD-----RNPYRAASIMKEHYPRVSWYTCSPSGV 671          
BLAST of NO12G01540 vs. NCBI_GenBank
Match: EWM29475.1 (hypothetical protein Naga_100128g9 [Nannochloropsis gaditana])

HSP 1 Score: 93.6 bits (231), Expect = 3.700e-15
Identity = 94/395 (23.80%), Postives = 167/395 (42.28%), Query Frame = 0
Query:  207 VFNFKGEFPQSRAFSYATYAVANQKVTYVDMIADTDIVPATGVNPFVAGPSVTGASGTYDLYVTPDGKEGFPNELKSFA--HGSAPSE--------LSGLIIVYRVIMADGIRADGWGGVPPPTLRVKAFSVLATGLWMNLAPCNPKNDATIQRFLDDKLTLQEGFSDVKVECDVFNMDNNFVYYDDAQYFKTPDENHVIS---CGNRALLPS-----GSDMITIISGTIPPAS----------------DSRYSSISLVNLYPPGKNVYTVSDQSLRNFY---WDQGKSAVNYTIIMAKNKLALNKCGLSKLPSNWYQVYWSGFTDAVDGSYPGIVYREVMTN-------GNEQSLEQVRYACEAEKDCSNPRFFEHQMREFYPRISYLSCSTA 558
            V+     FP+   FSY TY++    +T    + D  I P+ G NP+    +  GA GTY++YVT DG +G+PNE++  +  H +A           +  L +V   +         WGGV  P +   +++      W  L PC   +D T  R+  ++   Q G++           D  ++ Y  +Q+++     H++S     + AL P      G + + +I GT P  +                 +RY S +  +++ PG    +++ Q + NFY   WD+      Y I+ A +   +  CGL   P   +  Y +   +    + P ++ RE++          ++QS+E V   C  E  C +  F +  + + YP +   +C  A
Sbjct:   54 VYKISASFPRVVYFSYETYSLRGHPLT---SLPDLRIDPSWGKNPYREETTEEGA-GTYEIYVTRDGNKGWPNEVRGLSEDHTNATQAAFSRVMDFVDNLSVVMLRLYTTEQPPSVWGGVDRPVI---SYTDDLGQTWKELQPC---SDTT--RYQFNRAMRQIGWT---------VYDFRYLIY-HSQWYRL-RSCHLLSKREADHPALFPDVNVQLGGNFVMVIEGTAPLTATGLFEGPRPVWNVTNYSTRYWSFAAADVFVPGPTYSSLTAQDMENFYGKGWDR-----RYKIVGATSIDIVKACGLDD-PHALFLPYKNELMNNNPPAVPAVIEREMLARHMAMGLPSDKQSIEYVTSNCGKENKCLSIDFMKASLGDQYPSLQVYTCDVA 419          
BLAST of NO12G01540 vs. NCBI_GenBank
Match: EWM21339.1 (hypothetical protein Naga_100075g21 [Nannochloropsis gaditana])

HSP 1 Score: 89.7 bits (221), Expect = 5.300e-14
Identity = 93/411 (22.63%), Postives = 159/411 (38.69%), Query Frame = 0
Query:  201 PTTSATVFNFKGEFPQSRAFSYATYAVANQKVTYVDMIADTDIVPATGVNPFVAGPSVTGASGTYDLYVTPDGKEGFPNELKSFAHGSAPSELSGLIIVYRVIMAD---GIRADG----WGGVPPPTLRVKAFSVLATGLWMNLAPCNPKNDATIQRFLDD---------KLTLQEGFSDVKVECDVFNMDNNFVYYDDAQYFKTPDENHVISCGNRALLPSGSDMITIISGTIPPAS---------------DSRYSSISLVNLYPPGKNVYTVSDQSLRNFY--------WDQGKSAVNYTIIMAKNKLALNKCGLSKLPSNWYQVYWSGFTDAVDGSYPGIVYREVMTNGNEQ-------SLEQVRYACEAEKD---CSNPRFFEHQMREFYPRISYLSCSTAGLAPA 563
            P     V+  +G+FP  R FS+  Y  + Q ++    + DTDI P++G NPF          GTY++YV+ DG +G+PNE+ +    S        ++ +R+ + D   G    G    WG V  P + +        G W  +  C+ +  A  +  +++            LQ G      E  +F+ + N +        +  +EN++  C  + +     D I  I+G +P                  DSRY S +  +  P   +  T+ D+ + N Y        WD+      Y ++   +     KCGL     +         T       P IV R ++  G ++       +   +R  CE+      C   R  +  ++EFYP +   +C    L PA
Sbjct:  152 PHKEEEVYRIRGKFPYVRYFSFTVYDASLQSIS---TLHDTDIRPSSGKNPFNDIEVTEDNMGTYEIYVSKDGSKGYPNEMAALRPDSTSPY---ALLAFRLQLLDPRAGEDRSGKNREWGYVDMPLVEILNH---RNGEWDIIRRCSDEFQARTEEVIENLDLTFNTWWPKNLQIGTECNATEFSLFDPEQNPIIRRGVA-VRNANENYIFWCMPKEI--GKKDYIIRITGKLPRTPYGLFDDIRVADTARYDSRYVSFTSADAIPLYPSYETIHDRDIFNHYSTDPFGSDWDR-----MYNLVATSDVNLAKKCGLYNRAEDVLLQLTRSPTFTHLPHVPAIVMRHLLPGGGKERRGTEGVANVNLRNECESPTGKLLCDPARSAKVLLQEFYPLVQIWTCDYQNLKPA 545          
BLAST of NO12G01540 vs. NCBI_GenBank
Match: EWM22030.1 (hypothetical protein Naga_100052g19 [Nannochloropsis gaditana])

HSP 1 Score: 70.9 bits (172), Expect = 2.500e-8
Identity = 49/158 (31.01%), Postives = 65/158 (41.14%), Query Frame = 0
Query:  823 ARFASPTLNWLYANGQEVGGEQSMINSAGTTSFALDQNAPTIVLAFK-----------AVDDTRKTVRSFIKGQFNLCGYEYVTDASWRCAITEPFTHDWTLPGFDDSKW-NPVRI-VDGFPW------QPAPSAGMSPEASWVWAQEGTQTFCRLEV 962
            A   SP   W + NGQ +       N    +S AL QN  ++ L  K           AV+ +   V   +  +F++CG +  TD SW C    P    W+ P FDDS W N VR+   G P        P  S+  SP   W       +TFCR  V
Sbjct:   61 AEVMSPCNMWAFVNGQSLDASMGFGNGPTHSSMALPQNTSSVTLVLKSFCTPFSFPVSAVEGS--PVHPMVAAKFDVCGTDVKTDESWVCINHFPEEGSWSSPDFDDSAWPNAVRVEASGLPTGFTYIAGPTESSDDSPHGGW-------ETFCRKTV 209          
BLAST of NO12G01540 vs. NCBI_GenBank
Match: EWM22031.1 (hypothetical protein Naga_100052g19 [Nannochloropsis gaditana])

HSP 1 Score: 70.9 bits (172), Expect = 2.500e-8
Identity = 49/158 (31.01%), Postives = 65/158 (41.14%), Query Frame = 0
Query:  823 ARFASPTLNWLYANGQEVGGEQSMINSAGTTSFALDQNAPTIVLAFK-----------AVDDTRKTVRSFIKGQFNLCGYEYVTDASWRCAITEPFTHDWTLPGFDDSKW-NPVRI-VDGFPW------QPAPSAGMSPEASWVWAQEGTQTFCRLEV 962
            A   SP   W + NGQ +       N    +S AL QN  ++ L  K           AV+ +   V   +  +F++CG +  TD SW C    P    W+ P FDDS W N VR+   G P        P  S+  SP   W       +TFCR  V
Sbjct:   47 AEVMSPCNMWAFVNGQSLDASMGFGNGPTHSSMALPQNTSSVTLVLKSFCTPFSFPVSAVEGS--PVHPMVAAKFDVCGTDVKTDESWVCINHFPEEGSWSSPDFDDSAWPNAVRVEASGLPTGFTYIAGPTESSDDSPHGGW-------ETFCRKTV 195          
The following BLAST results are available for this feature:
BLAST of NO12G01540 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 8
Match NameE-valueIdentityDescription
XP_005856101.10.000e+075.25hypothetical protein NGA_0332100 [Nannochloropsis ... [more]
EWM22223.14.600e-3426.25hypothetical protein Naga_100312g6 [Nannochloropsi... [more]
XP_005854425.16.000e-2624.50hypothetical protein NGA_0235800 [Nannochloropsis ... [more]
EWM26805.18.100e-2322.37protein of unknown function DUF1214 [Nannochlorops... [more]
EWM29475.13.700e-1523.80hypothetical protein Naga_100128g9 [Nannochloropsi... [more]
EWM21339.15.300e-1422.63hypothetical protein Naga_100075g21 [Nannochlorops... [more]
EWM22030.12.500e-831.01hypothetical protein Naga_100052g19 [Nannochlorops... [more]
EWM22031.12.500e-831.01hypothetical protein Naga_100052g19 [Nannochlorops... [more]
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL124nonsL124Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR014ncniR014Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR006ngnoR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010073NSK010073Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO12G01540.1NO12G01540.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|592097gene_5312Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100054g15gene4641Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO12G01540.1NO12G01540.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO12G01540 ID=NO12G01540|Name=NO12G01540|organism=Nannochloropsis oceanica|type=gene|length=2928bp
ATGGCGCGTCTTCTGAGCACGTCGAGAATCGCGACCCTGCTTATGGTGGT
GACTCTCCCTGCATGGAATATCCAGCCAGATAACCCCTACAAACTTTCCT
CGGGAGTGGTAGACGCGGTGGATGCGAGCTCGTTAATGGCAGGGGCCAGC
GCCATCGCTAAGGGCCTTGCGGCGAGCAAAGGAACAAGCATGAGTGGCGT
AAGCCCTGGTCTGGCTGCTGAAATCGAGAATGATCTTTCAGTAAATGATG
CGCCGGCTGTAAATCAAGGCAGTACGGTTGGAGGCCCCGTGATGAACATG
GGGCGGGGCTCTGGCACGTCTCTGGGTGATGGATTGACCTGGAATTTCGG
ATCCAAGGGGATGATTGATATGATGACAGGGTTCTTCATGACCTTCATGA
CGGGGACTTCCAACCCGGATAGTGCCTTGAATGTTTACGGTAGCGCATTT
ACGAGCCAGGACCCGGAGGAAATCTCGGCAGCCTTTGGCAAGCTTTTGAC
CTCCCTGGACATGACGTGCGCGTTCCAAATGACAAGCGGCGGAGATGGGG
TAGACATGAAGTTTCGTGACGGAAAGGAGGCATTGCATATCCAATATGTG
CCCACCACCAGCGCAACGGTTTTCAATTTTAAGGGTGAATTCCCTCAGTC
TCGCGCCTTCTCCTACGCCACCTACGCAGTGGCCAATCAAAAGGTGACAT
ACGTTGACATGATCGCCGACACGGACATCGTGCCCGCCACGGGTGTAAAT
CCCTTTGTGGCTGGCCCTTCCGTTACTGGTGCATCTGGCACGTACGACCT
GTACGTGACCCCCGACGGCAAGGAGGGCTTCCCGAACGAGCTGAAGTCCT
TCGCGCACGGGAGTGCACCCAGTGAGCTATCAGGGCTGATCATCGTGTAT
CGCGTTATCATGGCAGATGGGATTCGAGCGGATGGATGGGGTGGCGTCCC
TCCCCCAACCCTGCGTGTGAAGGCGTTTAGCGTGTTGGCGACTGGGTTGT
GGATGAATCTGGCTCCATGCAATCCCAAGAACGACGCGACCATCCAGCGG
TTCCTCGACGACAAGCTCACCCTGCAAGAGGGATTCTCGGACGTCAAGGT
CGAATGCGACGTTTTCAATATGGACAACAATTTTGTCTATTATGACGACG
CCCAGTACTTCAAAACTCCAGACGAAAACCATGTGATTTCCTGCGGCAAC
CGTGCCCTCCTTCCTTCGGGCTCCGATATGATCACCATCATCTCCGGCAC
CATCCCCCCCGCCTCTGATTCCCGCTACTCGTCCATCAGTCTCGTCAACC
TCTACCCCCCGGGTAAAAACGTCTACACCGTATCTGACCAGTCTCTCCGA
AATTTTTATTGGGACCAGGGTAAATCTGCAGTGAACTACACCATCATCAT
GGCCAAGAACAAGCTCGCCCTTAACAAGTGCGGCCTGAGTAAGCTCCCAT
CTAACTGGTATCAGGTGTACTGGTCTGGCTTCACGGACGCTGTCGACGGC
TCCTACCCCGGCATTGTGTACCGTGAGGTGATGACCAATGGCAATGAACA
ATCCCTGGAACAAGTCCGCTACGCCTGCGAAGCAGAGAAAGACTGCTCCA
ACCCTAGATTCTTCGAACACCAAATGAGGGAATTTTACCCCCGTATCTCC
TACCTCTCATGCAGCACTGCCGGTCTGGCCCCTGCGCCAGTGGGGAATGC
TAACTTGACCTTCCCGGAGCCCCGTTTACCAACGCCTGCTTTCCAGGGCT
TGTGGACCGCCATTGCGGGGGAGGATGTGCTGGGGTTGGAGACGACGCCC
AAGGCAAGCGTGAATGTGGCCGCTCTCCAAGGGTCCGATGTGTATGTGAA
TGGAAAGCTTGCAGGAAGGGCCACGGACAATCCTAAGGTGGTGAGCAAGC
AGACTGCCGAGTTCGGGTGGTCCCCCATCCAGGCCGTTTATTACGACCCG
GAGAATCCAGTGACTGCTGAGCCGGTGGTCAGGTCTTACATTGACAATGA
CGGGACGGAAGTGCAGGTGGAATTGGTGCCCACCCCTGCAAATTTTATGC
CTGAAGAGGTGACACTGGCGATTAAGGTCCCTGTGACGGAGGCTAAGGCG
TTCTTTGCCACGCACGACGTGTGCGGGACCAGCAAGTCGAGCGCGGCGGG
GTGGAAGTGCAAGGCGACCACTTTCGCCCATGGCGATACAAACTGGACTC
TTGCAACGTTTGATGACACTGCTTGGTTGCCCGCCAAGGCTTTGAAGAAG
GGGGATGCTTGCAACGCTATGTCTATGGACTGCACGACCCTCCCTGCTGA
TGCACAGGGCATTTGGGCGGACACATGCACCGCCAGCGACGGTCCCAACC
AGGGGTTTGTATACTGCCGTTTGACTGTCCCTCAGACGTGTGATATGTCC
GGCATGGGCGGGTCAGACGACCGAGTCAAGACCTGGTGCCCTGATACGGC
GAATGCGGTGGCGACTGCGCGGTTTGCCTCCCCGACGTTGAACTGGTTGT
ACGCCAACGGGCAGGAGGTGGGGGGAGAACAGTCGATGATCAATTCGGCA
GGGACAACGAGCTTTGCCTTGGACCAGAACGCGCCCACGATTGTCCTGGC
TTTCAAAGCGGTGGATGATACGAGGAAAACAGTTAGGAGCTTCATAAAGG
GTCAATTTAACTTATGTGGGTATGAGTATGTGACGGACGCGTCGTGGAGG
TGTGCGATCACCGAGCCGTTTACACATGATTGGACCCTGCCGGGATTTGA
TGATTCGAAGTGGAACCCTGTCCGGATTGTGGATGGGTTCCCCTGGCAGC
CGGCGCCGAGTGCAGGCATGAGTCCCGAAGCCTCGTGGGTTTGGGCACAG
GAAGGGACGCAGACTTTCTGTCGGCTGGAGGTACCGAATCCGGTGTTTGA
AGGGTTGCAATCGGTGGTCATCGAATAA
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protein sequence of NO12G01540.1

>NO12G01540.1-protein ID=NO12G01540.1-protein|Name=NO12G01540.1|organism=Nannochloropsis oceanica|type=polypeptide|length=976bp
MARLLSTSRIATLLMVVTLPAWNIQPDNPYKLSSGVVDAVDASSLMAGAS
AIAKGLAASKGTSMSGVSPGLAAEIENDLSVNDAPAVNQGSTVGGPVMNM
GRGSGTSLGDGLTWNFGSKGMIDMMTGFFMTFMTGTSNPDSALNVYGSAF
TSQDPEEISAAFGKLLTSLDMTCAFQMTSGGDGVDMKFRDGKEALHIQYV
PTTSATVFNFKGEFPQSRAFSYATYAVANQKVTYVDMIADTDIVPATGVN
PFVAGPSVTGASGTYDLYVTPDGKEGFPNELKSFAHGSAPSELSGLIIVY
RVIMADGIRADGWGGVPPPTLRVKAFSVLATGLWMNLAPCNPKNDATIQR
FLDDKLTLQEGFSDVKVECDVFNMDNNFVYYDDAQYFKTPDENHVISCGN
RALLPSGSDMITIISGTIPPASDSRYSSISLVNLYPPGKNVYTVSDQSLR
NFYWDQGKSAVNYTIIMAKNKLALNKCGLSKLPSNWYQVYWSGFTDAVDG
SYPGIVYREVMTNGNEQSLEQVRYACEAEKDCSNPRFFEHQMREFYPRIS
YLSCSTAGLAPAPVGNANLTFPEPRLPTPAFQGLWTAIAGEDVLGLETTP
KASVNVAALQGSDVYVNGKLAGRATDNPKVVSKQTAEFGWSPIQAVYYDP
ENPVTAEPVVRSYIDNDGTEVQVELVPTPANFMPEEVTLAIKVPVTEAKA
FFATHDVCGTSKSSAAGWKCKATTFAHGDTNWTLATFDDTAWLPAKALKK
GDACNAMSMDCTTLPADAQGIWADTCTASDGPNQGFVYCRLTVPQTCDMS
GMGGSDDRVKTWCPDTANAVATARFASPTLNWLYANGQEVGGEQSMINSA
GTTSFALDQNAPTIVLAFKAVDDTRKTVRSFIKGQFNLCGYEYVTDASWR
CAITEPFTHDWTLPGFDDSKWNPVRIVDGFPWQPAPSAGMSPEASWVWAQ
EGTQTFCRLEVPNPVFEGLQSVVIE*
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Synonyms
Publications