NO12G01500, NO12G01500 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO12G01500 vs. NCBI_GenBank
Match: EWM25859.1 (uv excision repair protein [Nannochloropsis gaditana]) HSP 1 Score: 345.9 bits (886), Expect = 2.100e-91 Identity = 315/414 (76.09%), Postives = 328/414 (79.23%), Query Frame = 0 Query: 68 MKLMVRDVGTKRMVVEVEPSLKIGELKTKLQAEHSVADPARQKMIYKGKVLKDADTIESTGVTEADFYVCMVSAPPKPKPTVVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDPDQVEGLISMGFAEAHVRAALEATGGNPDAAYTLLESGGPIQPXXXXXXXXXXXXXXXXXXXXIMSLEDLRASPQFDQLRRMVQSNPNAIDQVLAVIGQQSPQLFQVILAQQDAFIAMMNEPIEGTEAVXXXXXXXXXXXXXXXXXXXXVNPFAGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAQRNQLLSTLVGLPLEQVEQFSGQLIQALASG--TAPGMPGAGGGAMPPGAQRIELTAEEAANLNQLVEMGFERNEALQVFLACDKNLEMAASVLFQEAEAGG 480 MKL V+DVG K+MVVEVEP++KIGELKTKLQAE + ADPARQKMI+KGKVLKD DTIESTGVTE DFYVCMVSA PKPK T XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX D QVEGL+SMGFAEA+VRAALEATGG+PDAAY LLESG PIQP XXXXXXXXXXXXXI SLE RA PQFDQLRR+VQSNP AIDQVL IGQQSPQL QVILAQQD F+AMMNEPIEG A XXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX FSGQLI+ALASG A PPG+QRIELTAEEAANLNQLVEMGFERNEALQVFLACDKNLEMAASVLFQEAE GG Sbjct: 1 MKLTVKDVGGKKMVVEVEPAMKIGELKTKLQAEQNGADPARQKMIHKGKVLKDDDTIESTGVTETDFYVCMVSAAPKPKTT---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPADAAQVEGLVSMGFAEANVRAALEATGGSPDAAYALLESGAPIQP----PTPXXXXXXXXXXXXXITSLEAFRALPQFDQLRRLVQSNPGAIDQVLGFIGQQSPQLLQVILAQQDEFVAMMNEPIEGDTA-----SGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSGQLIEALASGXXXXXXXXXXXXXAPPPGSQRIELTAEEAANLNQLVEMGFERNEALQVFLACDKNLEMAASVLFQEAETGG 402
BLAST of NO12G01500 vs. NCBI_GenBank
Match: XP_005856095.1 (UV excision repair protein RAD23, partial [Nannochloropsis gaditana CCMP526] >EKU20231.1 UV excision repair protein RAD23, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 233.8 bits (595), Expect = 1.200e-57 Identity = 268/425 (63.06%), Postives = 296/425 (69.65%), Query Frame = 0 Query: 54 SHPHPCLIVTESSKMK------LMVRDV--GTKRMVVEVEPSLK-------------IGELKTKLQAEHSVADPA-RQKMIYKGKVLKDADTIESTGVTEADFYVCMVSAPPKPKPTVVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDPDQVEGLISMGFAEAHVRAALEATGGNPDAAYTLLESGGPIQPXXXXXXXXXXXXXXXXXXXXIMSLEDLRASPQFDQLRRMVQSNPNAIDQVLAVIGQQSPQLFQVILAQQDAFIAMMNEPIEGTEAVXXXXXXXXXXXXXXXXXXXXVNPFAGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAQRNQLLSTLVGLPLEQVEQFSGQLIQALASG--TAPGMPGAGGGAMPPGAQRIELTAEEAANLNQLVEMGFERNEAL 455 SH P + T+ + ++ + V+DV + R V ++PS+ +G+ + K++ V + A +Q + KGKVLKD DTIESTGVTE DFYVCMVSA PKPK T XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX D QVEGL+SMGFAEA+VRAALEATGG+PDAAY LLESG PIQP XXXXXXXXXXXXXI SLE RA PQFDQLRR+VQSNP AIDQVL IGQQSPQL QVILAQQD F+AMMNEPIEG A XXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX FSGQLI+ALASG A PPG+QRIELTAEEAANLNQLVEMGFERN+ + Sbjct: 163 SHNQPLPLETDPNVIRRGIHVSVYVKDVFPNSGRFSVTLDPSIDKAKVIAARKQKRLLGKKRNKVKKLEGVEEGAEKQARVVKGKVLKDDDTIESTGVTETDFYVCMVSAAPKPKTT---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPADAAQVEGLVSMGFAEANVRAALEATGGSPDAAYALLESGAPIQP----PTPXXXXXXXXXXXXXITSLEAFRALPQFDQLRRLVQSNPGAIDQVLGFIGQQSPQLLQVILAQQDEFVAMMNEPIEGDTA-----SGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSGQLIEALASGXXXXXXXXXXXXXAPPPGSQRIELTAEEAANLNQLVEMGFERNKTM 575
BLAST of NO12G01500 vs. NCBI_GenBank
Match: GAX15098.1 (UV excision repair protein RAD23 [Fistulifera solaris]) HSP 1 Score: 139.0 bits (349), Expect = 4.000e-29 Identity = 154/413 (37.29%), Postives = 196/413 (47.46%), Query Frame = 0 Query: 68 MKLMVRDVGTKRMVVEVEPSLKIGELKTKLQAEHSVADPARQKMIYKGKVLKDADTIESTGVTEADFYVCMVSAPPKP---------KPTVVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDPDQVEGLISMGFAEAHVRAALEATGGNPDAAYTLLESGGPIQPXXXXXXXXXXXXXXXXXXXXIMSLEDLRASPQFDQLRRMVQSNPNAIDQVLAVIGQQSPQLFQVILAQQDAFIAMMNEPIEGTEAVXXXXXXXXXXXXXXXXXXXXVNPFAGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAQRNQLLSTLVGLPLEQVEQFSGQLIQALASGTAPGMPGAGGGAMPPGAQRIELTAEEAANLNQLVEMGFERNEALQVFLACDKNLEMAASVL 472 MKL V+ + + VEVE + + E K+ ++ E + K+I+ GKVLKD DTI S G+ DF V MV+ KP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + V+ L +MGF EA VR L A GNPD A L +G P L+ LR PQF++LRR+VQSNP + QVLA IGQQ P+L + I A Q F+ MMNEP+ T A P G+ ++ ++GL +Q+ Q M GGG G Q + LT EE A +++L EMGF+R+EA Q FLACDKN +AA++L Sbjct: 1 MKLTVKTLKGAKFDVEVEETQTVQEAKSAIEKEKPELFASTLKLIHSGKVLKDEDTIASCGIKPNDFLVVMVTKAKKPAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTDTFSQEAVDNLTAMGFPEAEVRHCLRAAQGNPDVAVEFLTNG---IPDAVSAAMNATESSSATPAQATQPLQALRNHPQFNELRRLVQSNPQMLQQVLAQIGQQQPELLEEINAHQALFLEMMNEPV--TAAPSSAPTGSRAPTGSSDSASGMGMPMEGM-----------------GNPAQMAQMIQSMSPSELDQMAQMMGLSSDQLRMTXXXXXQMPPEQLQQFMAHMGGGEGHGGQQVLRLTEEEMAAVDRLTEMGFDRSEAAQAFLACDKNEALAANLL 391
BLAST of NO12G01500 vs. NCBI_GenBank
Match: XP_008879471.1 (UV excision repair protein Rad23 [Aphanomyces invadans] >ETV91834.1 UV excision repair protein Rad23 [Aphanomyces invadans]) HSP 1 Score: 137.1 bits (344), Expect = 1.500e-28 Identity = 167/433 (38.57%), Postives = 212/433 (48.96%), Query Frame = 0 Query: 68 MKLMVRDVGTKRMVVEVEPSLKIGELKTKLQAEHSVADPARQKMIYKGKVLKDADTIESTGVTEADFYVCMVSAPPKPKPTVVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVD--------------PDQVEGLISMGFAEAHVRAALEATGGNPDAAYTLLESGGPIQPXXXXXXXXXXXXXXXXXXXXIMSLEDLRASPQFDQLRRMVQSNPNAIDQVLAVIGQQSPQLFQVILAQQDAFIAMMNEPIEGTEAVXXXXXXXXXXXXXXXXXXXXVNPFAGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAQRNQLLSTLVGLPLEQVEQFSGQLIQALASGTAPGMPGAGGGAMPPGA-QRIELTAEEAANLNQLVEMGFERNEALQVFLACDKNLEMAASVLFQE-----AEAGGG 481 MKL V+ + +E E + +K K++A + A QK+I+ GKVLKD + V E DF V MV+ P + T XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + V L+ MGF E VRAAL+A NP+ A L +G P QP SLE LR PQFD LRRM+Q+NP+A+ VL IG Q+PQL Q+I Q+ F+AM+NEPI EA +PF Q+ ++ +G+ EQ++QF+ L A M GG GA RI LT EEAA + +LV+MGF+RNE +Q +LACDKN +AA+ L A+A GG Sbjct: 1 MKLTVKTLQGVSYPIEAELEDTVLSVKGKVEAVNGAA-VDNQKLIHAGKVLKDDSKLSEYNVKENDFLVVMVTKPKVVRKTAADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGIVVGEALSETVRQLVDMGFPEDQVRAALQAAFHNPERAVEYLMNGIPEQPAAPPASTTAPASGGLGAP---TSLEALRHHPQFDALRRMIQANPSALPTVLQQIGAQNPQLLQLIHQNQEQFVAMLNEPI--AEAA-----------TPSATPSVPASPFG------------DSGADGMPTPQQLQQLMASLSPQQQAAMAAQMGMTYEQLQQFTQMLNTMPPEAMAQLMQQMAGGEGGHGAPTRIHLTEEEAAAVGRLVDMGFDRNEVIQAYLACDKNEALAANFLMDSMSGDYADASGG 404
BLAST of NO12G01500 vs. NCBI_GenBank
Match: GAX23632.1 (UV excision repair protein RAD23 [Fistulifera solaris]) HSP 1 Score: 134.8 bits (338), Expect = 7.500e-28 Identity = 154/413 (37.29%), Postives = 200/413 (48.43%), Query Frame = 0 Query: 68 MKLMVRDVGTKRMVVEVEPSLKIGELKTKLQAEHSVADPARQKMIYKGKVLKDADTIESTGVTEADFYVCMVS---------APPKPKPTVVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDPDQVEGLISMGFAEAHVRAALEATGGNPDAAYTLLESGGPIQPXXXXXXXXXXXXXXXXXXXXIMSLEDLRASPQFDQLRRMVQSNPNAIDQVLAVIGQQSPQLFQVILAQQDAFIAMMNEPIEGTEAVXXXXXXXXXXXXXXXXXXXXVNPFAGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAQRNQLLSTLVGLPLEQVEQFSGQLIQALASGTAPGMPGAGGGAMPPGAQRIELTAEEAANLNQLVEMGFERNEALQVFLACDKNLEMAASVL 472 MKL V+ + + VEVE + + E K+ ++ E + K+I+ GKVLKD DTI S G+ DF V MV+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + V+ L +MGF EA VR L A GNPD A L +G P L+ LR PQF++LRR+VQSNP + QVLA IGQQ P+L + I + Q F+ MMNEP+ T A P G+ A+ +Q ++ ++GL +Q+ + L Q M GGG G Q + LT EE A +++L EMGF+R+EA Q FLACDKN +AA++L Sbjct: 1 MKLTVKTLKGAKFDVEVEETHTVQEAKSAIEKEKPELVASTLKLIHSGKVLKDEDTIASCGIKPNDFLVVMVTKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTDTFSQEAVDNLTAMGFPEAEVRHCLRAAQGNPDVAVEFLTNG---IPDAVSAAMNATESSSATPAQATQPLQALRNHPQFNELRRLVQSNPQMLQQVLAQIGQQQPELLEEINSHQALFLEMMNEPV--TAAPSSAPTGSRAPTASSESASGMGMPMEGM----------------GNPAQMAQMIQSMSPAELDQ-MAQMMGLSSDQLRMTAQMLGQMPPEQLQQFMAHMGGGEGHGGQQVLRLTEEEMAAVDRLTEMGFDRSEAAQAFLACDKNEALAANLL 391
BLAST of NO12G01500 vs. NCBI_GenBank
Match: XP_002178012.1 (RAD23 [Phaeodactylum tricornutum CCAP 1055/1] >EEC50826.1 RAD23 [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 124.4 bits (311), Expect = 1.000e-24 Identity = 162/411 (39.42%), Postives = 205/411 (49.88%), Query Frame = 0 Query: 68 MKLMVRDVGTKRMVVEVEPSLKIGELKTKLQAEHSVADPARQKMIYKGKVLKDADTIESTGVTEADFYVCMVSAPPKPKPTVVAA--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDPDQVEGLISMGFAEAHVRAALEATGGNPDAAYTLLESGGP-----IQPXXXXXXXXXXXXXXXXXXXXIMSLEDLRASPQFDQLRRMVQSNPNAIDQVLAVIGQQSPQLFQVILAQQDAFIAMMNEPIEGTEAVXXXXXXXXXXXXXXXXXXXXVNPFAGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAQRNQLLSTLVGLPLEQVEQFSGQLIQALASGTAPGMPGAGGGAMPPGAQRIELTAEEAANLNQLVEMGFERNEALQVFLACDKNLEMAASVL 472 MKL+V+ + ++ + E S + ++K ++A S K+I+ GKVLKD D+I S G+ E DF V MV+ KP AA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX V + V L SMGF EA V+ L A GNPD A L +G P XXXXXXXXXXXX L+ LR PQF+ LRR+VQSNP + QVL IG A Q F+ +MNEP+E + +V ++ A XXX Q S ++QA+ G P G G+Q + LT EE A +++L EMGF+R+EA Q FLACDKN +AA++L Sbjct: 1 MKLLVKTLKGEKFEIHAEESQTVADVKGIIEATKSELSAGTLKLIHSGKVLKDEDSIASAGIKENDFLVVMVTKAKKPVAAKPAATPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDVSAEAVANLTSMGFPEAEVKHCLRAAHGNPDIAVEFLTNGIPEGVAEAAAAMNTSAVXXXXXXXXXXXXSGQPLQALRNHPQFNDLRRLVQSNPQMLQQVLTQIGXXXXXXXXXXNANQALFLQIMNEPVESSASV---SAAPAVSGSSDAPSLGGLDSGAAAMMEGMGNPAQMAQMIQGMSPEELNQMAXXXXXXXXXXXXXXXXXXXXXXXQLSQFMMQAMGGGEGPESMG--------GSQVLRLTEEEMAAVDRLAEMGFDRSEAAQAFLACDKNEALAANLL 400
BLAST of NO12G01500 vs. NCBI_GenBank
Match: CBJ25906.1 (UV excision repair protein RAD23B homolog [Ectocarpus siliculosus]) HSP 1 Score: 124.0 bits (310), Expect = 1.300e-24 Identity = 173/423 (40.90%), Postives = 222/423 (52.48%), Query Frame = 0 Query: 68 MKLMVRDVGTKRMVVEVEPSLKIGELKTKLQAEHSVADPARQKMIYKGKVLKDADTIESTGVTEADFYVCMVSAPPKPKPTVVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDPDQVEGLISMGFAEAHVRAALEATGGNPDAAYTLLESGGPIQPXXXXXXXXXXXXXXXXXXXXIMSLEDLRASPQFDQLRRMVQSNPNAIDQVLAVIGQQSPQLFQVILAQQDAFIAMMNEPIEGTEAVXXXXXXXXXXXXXXXXXXXXVNPFAGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAQRNQLLST-------LVGLPLEQVEQFSGQLIQALASGTAPGMPGAGGGAMPPGA-----QRIELTAEEAANLNQLVEMGFERNEALQVFLACDKNLEMAASVLFQEAEAG 479 +KL V+ + K+ +EVE + + E+K ++ +++ A+ K+I+ G++LKD T+ + E +F VCMV+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX V L MGF E V AAL A GNPD A L +G P + +LED R PQF++L+R+VQ +P + +L +IG+QSP L I Q FIA+MNEPI + XXXXXXXXXXXXXXXXXXXXXXX AQR Q+ + Q + S A GMPGAG G +PPGA I L+ EE A + +L E+GFER +A Q +LACDKN +AA+ L + AG Sbjct: 2 VKLTVKTIKGKKFQIEVEQTQTVREVKGVIEEQNAEFPAAQLKLIHSGQILKDECTLAEYKIKEEEFLVCMVT----------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRQLTEMGFPEDQVTAALRAAMGNPDVAVEFLMTGIP----DNIQAAAAPAQAAAAPTGAMETLEDFRGHPQFNELKRLVQRDPTQLSSILQMIGRQSPNLLARIHENQGDFIALMNEPINES--------------------APPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLLQGMSPAQRAQMAAAXXXXXXXXXXXXXXXXXXXXXXXXQLMGSMNAGGMPGAGMGGIPPGAGGAGGNVIRLSEEEGAAVARLTELGFERTDAAQAYLACDKNEALAANFLLNDMGAG 390
BLAST of NO12G01500 vs. NCBI_GenBank
Match: XP_024577246.1 (uv excision repair protein rad23 [Plasmopara halstedii] >CEG40877.1 uv excision repair protein rad23 [Plasmopara halstedii]) HSP 1 Score: 118.2 bits (295), Expect = 7.200e-23 Identity = 157/436 (36.01%), Postives = 195/436 (44.72%), Query Frame = 0 Query: 68 MKLMVRDVGTKRMVVEVEPSLKIGELKTKLQAEHSVADPARQKMIYKGKVLKDADTIESTGVTEADFYVCMVSAPPKPKPTVV-------------------AAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDPDQ----VEGLISMGFAEAHVRAALEATGGNPDAAYTLLESGGPIQPXXXXXXXXXXXXXXXXXXXXIMSLEDLRASPQFDQLRRMVQSNPNAIDQVLAVIGQQSPQLFQVILAQQDAFIAMMNEPIEGTEAVXXXXXXXXXXXXXXXXXXXXVNPFAGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAQRNQLLSTLVGLPLEQVEQFSGQLIQALASGTAPGMPGAGGGAMPPGAQRIELTAEEAANLNQLVEMGFERNEALQVFLACDKNLEMAASVLFQEAEAGGG 481 MKL V+ + +E E + I +K K++ E A+QK+I+ GKVLKD T+ V E DF V MV+ P PKP+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX V +Q V L+ MGF E VR+AL A NP+ A L +G P Q +LE LR PQFD LR++VQSNP + VL IG QSP+L ++I QD F+ M+NEPI EA PF L Q L L LP E +EQ RI LT EEAA +++L EMGFER + +Q +LACDKN +AA+ L ++ GG Sbjct: 1 MKLTVKTLQGVAFPLEAELTDDISAVKQKIE-ELQKFPVAQQKLIHAGKVLKDDSTLADYNVKENDFLVVMVTKPKAPKPSATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSNLVADEQMSATVHHLMDMGFPEDQVRSALRAAFNNPERAVEYLMTGIPEQAASEQTTVTSSGAGNEGTTN---TLEALRNHPQFDALRQLVQSNPQTLPAVLQQIGAQSPELLRLIHQNQDRFVQMLNEPIGTREA------------GATPSSSTGATPFT-LGTNVSSTEQQMQQQFSESLQMQIAAQMGMTPEQLRGLSQMLSNLPPEAMEQ-----XXXXXXXXXXXXXXXXXXXXXXXXXRIMLTEEEAAAVDRLCEMGFERTDVIQAYLACDKNEALAANFLMDSGDSFGG 414
BLAST of NO12G01500 vs. NCBI_GenBank
Match: XP_002907168.1 (UV excision repair protein RAD23 [Phytophthora infestans T30-4] >EEY63732.1 UV excision repair protein RAD23 [Phytophthora infestans T30-4]) HSP 1 Score: 117.5 bits (293), Expect = 1.200e-22 Identity = 169/452 (37.39%), Postives = 216/452 (47.79%), Query Frame = 0 Query: 68 MKLMVRDVGTKRMVVEVEPSLKIGELKTKLQAEHSVADPARQKMIYKGKVLKDADTIESTGVTEADFYVCMVSAP-------------------------PKPKPTVVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDPDQ----VEGLISMGFAEAHVRAALEATGGNPDAAYTLLESGGPIQPXXXXXXXXXXXXXXXXXXXXIMSLEDLRASPQFDQLRRMVQSNPNAIDQVLAVIGQQSPQLFQVILAQQDAFIAMMNEPIEGTEAVXXXXXXXXXXXXXXXXXXXXVNPFAGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAQRNQLLSTLVGLPLEQVEQFSGQLIQALASGTAPGMPGAGGGAMPPG----------AQRIELTAEEAANLNQLVEMGFERNEALQVFLACDKNLEMAASVLFQEAEAGGG 481 MKL V+ + ++ E + + +K K++ E ++QK+I+ GKVLKD T+ V E DF V MV+ P XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX V +Q V+ L+ MGF E VR+AL A NP+ A L +G P Q XXXXXXXXXXXX SLE LR PQFD LR++VQSNP A+ VL IG QSP+L ++I QD F+ M+NEPI EA P +G ++ ++ +G+ EQ+ S L M GGGA G RI L+ EEAA +++L EMGFER + +Q +LACDKN +AA+ L + GG Sbjct: 1 MKLTVKTLQGVAFPLDAELTDAVSAVKQKIK-ELQKFPVSQQKLIHAGKVLKDDSTLAEYNVKENDFLVVMVTKPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVSDEQMSATVQQLVDMGFPEDQVRSALRAAFNNPERAVEYLMTGIPEQAAAXXXXXXXXXXXXAGSDDVANSLEALRNHPQFDALRQLVQSNPAALPAVLQQIGAQSPELLRLIHQNQDRFVQMLNEPIGTREA--------------------GSAPSSGSGAGAAPFDLGMGGNGAMPTPQQIQQLVDSLTPEQQAQMAAQMGMSPEQLRGLSQMLSNLPPGAMEQMMASMGGGAGLEGXXXXXXXXXXXHRIMLSEEEAAAVDRLCEMGFERTDVIQAYLACDKNEALAANFLMDSGDNFGG 431
BLAST of NO12G01500 vs. NCBI_GenBank
Match: XP_002291659.1 (Rad23 like protein, partial [Thalassiosira pseudonana CCMP1335] >EED91766.1 Rad23 like protein, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 112.5 bits (280), Expect = 4.000e-21 Identity = 161/430 (37.44%), Postives = 209/430 (48.60%), Query Frame = 0 Query: 68 MKLMVRDVGTKRMVVEVEPSLKIGELKTKLQAEHSVADPARQKMIYKGKVLKDADTIESTGVTEADF----------YVCMVSAPPKPKPTVVA---------------AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDPDQVEGLISMGFAEAHVRAALEATGGNPDAAYTLLESGGPIQPXXXXXXXXXXXXXXXXXXXXIMS-LEDLRASPQFDQLRRMVQSNPNAIDQVLAVIGQQSPQLFQVILAQQDAFIAMMNEPIEGTEAVXXXXXXXXXXXXXXXXXXXXVNPFAGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAQRNQLLSTLVGLPLEQVEQFSGQLIQALASGTAPGMPGAGGGAMPPGAQRIELTAEEAANLNQLVEMGFERNEALQVFLACDKNLEMAASVL 472 M L V+ + + VEVE + E+K +Q + + K+I+ GKVLKD D IES + DF ++C ++ P PT A XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + ++ L ++GF E+ VR L A+ GNPD A L +G P XXXXXXXXXXXXXXXXXXX L+ LR+ PQFD LRR+VQ+NP+ + VL+ IGQQ P L Q I A Q F+ MMNEP+ + +P EQV+Q+ +Q AQ + L+ EE A +++L EMGF+R+EA Q +LACDKN +AA++L Sbjct: 1 MNLTVKTLKGGKFTVEVEAEKTVAEVKVAIQTNKDL-PASSMKLIHSGKVLKDEDKIESCNIKPNDFLVVMIAKVSSWLCTIAKAATPAPTAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEFPAEVIDNLKALGFPESEVRVCLRASNGNPDVAVEFLMNGIPPGIGXXXXXXXXXXXXXXXXXXXXXGPLDALRSHPQFDDLRRLVQTNPSTLQAVLSQIGQQQPDLLQAINANQAEFLQMMNEPM-------------------------------------------------------------------------ISAMPQEQVQQYMNMAMQ---------------------AQVLRLSEEEMAAVDRLTEMGFDRSEAAQAYLACDKNEALAANLL 335 The following BLAST results are available for this feature:
BLAST of NO12G01500 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO12G01500 ID=NO12G01500|Name=NO12G01500|organism=Nannochloropsis oceanica|type=gene|length=2143bpback to top protein sequence of NO12G01500.1 >NO12G01500.1-protein ID=NO12G01500.1-protein|Name=NO12G01500.1|organism=Nannochloropsis oceanica|type=polypeptide|length=508bpback to top Synonyms
Publications
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