Properties
Property Name Value
Description Unknown protein
Alignments
The following features are aligned
Aligned Feature Feature Type Alignment Location
chr12 genome chr12:427746..432276 +
Analyses
This gene is derived from or has results from the following analyses
Homology
BLAST of NO12G01380 vs. NCBI_GenBank
Match:
EWM25914.1 (hypothetical protein Naga_100048g32 [Nannochloropsis gaditana])
HSP 1 Score: 246.5 bits (628), Expect = 1.400e-61
Identity = 164/334 (49.10%), Postives = 208/334 (62.28%), Query Frame = 0
Query: 75 MDTFDYRHVSKVQGLPVEGLPGLYSFPIDGSTISGEFVWQLQLKLSSSTEGVTTVDIHELRVVVESGGGPGISGAGEGSLATTTMLMGDLDLKKSNK------MSTTGEAIKMTTNEMHAPRSSLGGSSSMRTS--GRGMSISDSDANTNSTRKSTTRQPSWPSKGGKSSRTASTPSVSSSDGHATTAGKLSRSTALSAIAMGR---SGGPSPDMVVRGXXXXXXXXXXXXRLVSQSQQQSNALMQQETAAVASVLNAVCEKMVGVVSEKTKAYLAKAGRRTERRVLDKMTKLEQRIEMFDHVLEHATSSSREIERALLALDEDLSSASKPLPV 398
MDTFDYRHV+KVQG PVEGL GLYSF +D +TI E VWQ+QLKLSS+ + +T+VDIH+ V++++ G G G G L+ TT +GDL++ KSN+ M + A +N + RS + + T+ GRG+S +D DA +++ +T H A KLSRST LS+ AMGR SGG + ++V+RG V A+M+QET AVASVLNAVCEKMVGV+SEKTK YLAKAGR+TERRVL+KM KLE+RIE FD+VLEHAT SSREIE+ALLALDE+L S KP PV
Sbjct: 1 MDTFDYRHVTKVQGRPVEGLLGLYSFSVDANTIPREQVWQIQLKLSSNAQQITSVDIHDFSVIIDTLPGSGSVGIGGLPLSNTTTRLGDLNMNKSNRGATSTSMDLSDSARSQASNFYTSTRSMSASTRTAATTKVGRGLSTADRDATRSASHVNTGAPGGSXXXXXXXXXXXXXXXXXVPRAHGNKASKLSRSTELSSSAMGRTGGSGGKTGELVLRG-----GRGEGEREAVVPHTGHDAAVMRQETEAVASVLNAVCEKMVGVMSEKTKLYLAKAGRKTERRVLEKMAKLEERIEKFDNVLEHATLSSREIEQALLALDENLPSPRKPSPV 329
BLAST of NO12G01380 vs. NCBI_GenBank
Match:
EWM27581.1 (hypothetical protein Naga_100015g23 [Nannochloropsis gaditana])
HSP 1 Score: 91.7 bits (226), Expect = 5.800e-15
Identity = 50/141 (35.46%), Postives = 81/141 (57.45%), Query Frame = 0
Query: 1 MPFIKSNWTCEPELHENGAFNFGQELAIKDLSLHRGEQT-RPCFLHVSSEVECVVRFLHLVTSVELLDVYALVGPMDT-FDYRHVSKVQGLPVEGLPGLYSFPIDGSTISGEFVWQLQLKLSSSTEGVTTVDIHELRVVVE 140
MP++KSNW+ P L E G F FG+ I +++L + + T R C+LHV+ E + V+ L L+ + + V + G T Y +++ ++G E PGL++F ID S +S VWQLQ+K G ++ I ++ V+VE
Sbjct: 1 MPYLKSNWSSMPPLEEFGRFAFGEIFTIPEMTLTQTDPTARACYLHVALEHQARVQELDLICAAPTIVVNLMRGKSTTGMSYTYLTTLKGQTSEEYPGLFAFRIDASLLSHVEVWQLQIKFLFPRVGEKSLLIKKVSVIVE 141
The following BLAST results are available for this feature:
BLAST of NO12G01380 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (
BLASTP analysis of N. oceanica IMET1 genes )
Total hits: 2
500 1000 1500 2000 2500 3000 3500 4000 4500 Expect = 1.40e-61 / Id = 49.10 Expect = 5.80e-15 / Id = 35.46 Sequence EWM25914.1 EWM27581.1
Match Name E-value Identity Description
EWM25914.1 1.400e-61 49.10 hypothetical protein Naga_100048g32 [Nannochlorops... [more] EWM27581.1 5.800e-15 35.46 hypothetical protein Naga_100015g23 [Nannochlorops... [more]
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Relationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence
>NO12G01380 ID=NO12G01380|Name=NO12G01380|organism=Nannochloropsis oceanica|type=gene|length=4531bp back to top protein sequence of NO12G01380.1
>NO12G01380.1-protein ID=NO12G01380.1-protein|Name=NO12G01380.1|organism=Nannochloropsis oceanica|type=polypeptide|length=405bp back to top