NO12G01350, NO12G01350 (gene) Nannochloropsis oceanica

Overview
NameNO12G01350
Unique NameNO12G01350
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2576
Alignment locationchr12:420207..422782 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr12genomechr12:420207..422782 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO12G01350 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL124nonsL124Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR014ncniR014Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR006ngnoR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010058NSK010058Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO12G01350.1NO12G01350.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|62771gene_5294Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO12G01350.1NO12G01350.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO12G01350 ID=NO12G01350|Name=NO12G01350|organism=Nannochloropsis oceanica|type=gene|length=2576bp
ATGTCAGAAGAAGAAGGCGGCCCACCAAGTAGCGGAAGTGGGGGCAGTGG
AGAACCCACGAATTCGACCGCAGCAGCAGGAACATTATCACTTCAGCCTC
CTGCCCCTCGCGTTGGAGAAGCAGGAGCCCTACAAACAGACAAGCAGGGT
GCATCAGCAATGCCAGCAGAGACAGGAAGAGGAAGAGAAGGTTCAGATGT
AATTGATAGTGACGGAGCTCCAACCCCAGGGGAGCAGGAGGGGCATGAGC
CTGAGTCCTCCGTCAAGGAAGGAGCAGCAGCAGCTGCCGCCAGGCCTGAC
CGTCGAGCCGCCAACCAACCCCGCAGTCAAATATCCATGAGCTATGACAA
GCACACCGTTGCCAATGAAAGTGTCGATGATGAAGAAGTTGTCACGTTGC
CGCCTGTCGCGGCCACGGCACGACGACGCGGCAGCTCATCAGCTGCTGCA
ACTTTTGTTCCCAGCAGCAGCAACACTACCGCCACGGTTCGTAAAAAGGG
TCGCCAAACCCCACGAATGCCTGTGTCGGGCCGTCCAAAAATCGGCACAC
AGATCGCCAAGATCTTCCCAGGGTGGGGTCTTTATTTAGGGCAGGTTGTC
GAGATTAAGGAGGAGACTTATTGGGTCCGGTACGAGGATGGAGAAGAAGA
AGGGTTTAAGCGCGAGGGGATCGAGCTCTTGCAGACGTTGTTGCTGTACG
CAGAGGCGGAGATAACTACGCAGgtaaggaacagtcgattaaggctgaga
gaggcgggattgatgacggaggaggaggtgagcagggcagagagggagga
ggaggaggcgagggaggaggagaggagagtcaaagctgaagaggaggggg
agggggggaggaagagggaggggagaaggaggaagaggaggtggaggaga
aagagatggctactccattcgctgcgcgtggcagtggaggctgcacgaag
GGAAAACACCAAAAAGCGAGGAAGAAAAAGAGGCACGAGGAAGTGGTAGA
GATTGACGGCGACGACAAGGATGAAGGCGAGGTAGCGGACGGTGACGTGG
AGGTGGGCGAGGAAGTGGAGGACAAAGATGAGAAAGCAATTTATCTGCAT
TGCGAGCGGTGTTGGTGCACTTTCATTTCCGAGGGTGGGCTTGTGTACCA
TAAGAACAAAGACGTCTGTAGTCAATACAAGCGAAAAAGCACCCGGAACC
CCACACCTGAAGAAATGGAGGGAGGGGAGGGAGGGAGGCAAGGATTGAAG
TGTCCGGTATGTGAGAGGACGTTCGAAGGGCCGAACTGTCTAAAATACCA
TTTGGAGAGGGCCGTGGGCTGTGTGGGGGGAGGGAGAGAGGGGGGTAAGA
AGGAAGAGGTAGAGGCGGTGTTGCTTTCGTTGGCGAGGCCGAAGGAGAGT
AGGAAGCCACCATGGAGGGAGAGAGGAAGGAGGAATGGGGAGGAGAAGGG
AGGGGAGGAGGATGATGCGGACTGGAGACTGAGAGAGAAGAGGAGCAAGA
AAGCGGCGGCGCTGAGAAAGCTGATGACGACAATGGTGGGGGATGGAATG
AAGGAAGAAGAGGAAGAAGAGGAGGAGGGTGGGGAGGGTGGGATGAAGAG
AAGGGGAGGATTGCGTCGGCGACGGGCTGCGATTATGGGTACCACAAAGG
CGGCAAAATTAGCGCAAAGGGAAGCGAAAAAGAAGGAAAAGGAGGAGAGT
TGGGGGAAGAAGAGGAGGAGAGTGGAGGAGGACGGAGAGGAGGACGGATC
GGAGTTTTCGATAGTGGGGGAGGAAGAGAGCGAGGAGGAGGGGGAAGAGT
ACAACGACGAGGATGTGGAAGGGGAGGAGGATCAGGAGGAGGAAGAGGAC
GAGGAAGGCAGTGTGAGCGTGCTGGCTGGTAACGGAAAGAGAAGGAGAAG
GAGGTTTGGAGGGAAGGAAGGATGGGAAGGGAAGAGGCAGATGGTGATGA
AGGGATCGAAGAGCCGAGTAGTTGACAGTCGAGTGACTGTATCGCTGTCG
GGGGTGGAGGGGCTAGTGGACACAGGGTTTGATAGGGGAATGTTGGTGGT
GGGAGAGGTGGAGGAGGGCTTAAGAACCGACCTGAAGGGGCTACAATTGT
TGTTGCATCATCATCGCCATCATCATCAGCAGCAGGAGGTGGAGGTCAAG
GAGGGAGGAAGGGCAGAAGAAAGGGAGGAGGGGCCACGACGTGTGCATGA
GGTGGTTGATCTGAGTGTGTGGATGCTGGAGAACGGATTGGAGGTGGCTT
CCCTTCCCCTTAAGCTAGTGCACAAGACCCGTGGCCCTCCGCCTCCTCCT
GTACTAGTAGACATCCTGCCTTTCCACTCTTTGCCTTCGCCCTTTTCTTT
CCCTTCTTTTCCCTCCTCTTCCTCCTCGAAGGGCAGTTGCAGCAGGGGCA
GGAGTGACAAGAGGGGGAGAGATGCGGAGAAAGGTGAGGCCGACACGGAC
CTTTTGGCCAACGCTGGCGGCCCCGTCCAAAGCCTTGACATCCTTCCCCC
CCCCCTCTCTCCTCCTCCTCCCCTTCCTCCTCTTCCTCGTCTTCCATTTA
CATCGCCCTTGGCACCACCAGCTTAA
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protein sequence of NO12G01350.1

>NO12G01350.1-protein ID=NO12G01350.1-protein|Name=NO12G01350.1|organism=Nannochloropsis oceanica|type=polypeptide|length=783bp
MSEEEGGPPSSGSGGSGEPTNSTAAAGTLSLQPPAPRVGEAGALQTDKQG
ASAMPAETGRGREGSDVIDSDGAPTPGEQEGHEPESSVKEGAAAAAARPD
RRAANQPRSQISMSYDKHTVANESVDDEEVVTLPPVAATARRRGSSSAAA
TFVPSSSNTTATVRKKGRQTPRMPVSGRPKIGTQIAKIFPGWGLYLGQVV
EIKEETYWVRYEDGEEEGFKREGIELLQTLLLYAEAEITTQGKHQKARKK
KRHEEVVEIDGDDKDEGEVADGDVEVGEEVEDKDEKAIYLHCERCWCTFI
SEGGLVYHKNKDVCSQYKRKSTRNPTPEEMEGGEGGRQGLKCPVCERTFE
GPNCLKYHLERAVGCVGGGREGGKKEEVEAVLLSLARPKESRKPPWRERG
RRNGEEKGGEEDDADWRLREKRSKKAAALRKLMTTMVGDGMKEEEEEEEE
GGEGGMKRRGGLRRRRAAIMGTTKAAKLAQREAKKKEKEESWGKKRRRVE
EDGEEDGSEFSIVGEEESEEEGEEYNDEDVEGEEDQEEEEDEEGSVSVLA
GNGKRRRRRFGGKEGWEGKRQMVMKGSKSRVVDSRVTVSLSGVEGLVDTG
FDRGMLVVGEVEEGLRTDLKGLQLLLHHHRHHHQQQEVEVKEGGRAEERE
EGPRRVHEVVDLSVWMLENGLEVASLPLKLVHKTRGPPPPPVLVDILPFH
SLPSPFSFPSFPSSSSSKGSCSRGRSDKRGRDAEKGEADTDLLANAGGPV
QSLDILPPPLSPPPPLPPLPRLPFTSPLAPPA*
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Synonyms
Publications