NO12G01340, NO12G01340 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO12G01340 vs. NCBI_GenBank
Match: EWM25919.1 (GDP-L-fucose synthetase [Nannochloropsis gaditana]) HSP 1 Score: 454.1 bits (1167), Expect = 4.200e-124 Identity = 213/264 (80.68%), Postives = 238/264 (90.15%), Query Frame = 0 Query: 75 MRVSVKNMTLGVGSYLGIIGGGYWWALSQREDAAKKELGEKAEDEQGNPKQFSEEERLAIFREGASGYDKQIGTDETVMGLNLLRRWLLRQAKGKVLEVAGGTGRNLEYFPQSVELTIIDLCEGMMAETERKLRKSRRGDVTFGRMDVNRMSFPSRTFDTVCDTFGLCSFEDPQQSLQEMERVCKDDGQILLLEHGRSHYQWLNAILDKNSHRHTARWGCVWNRDIEKMVREAGLEVTSMTRWHFGTTYLIHAKPGKREGDQMK 339 MRVSVK++TLG+GSYLGI+GGGY+WALSQRE AAKK L EKAED G PK+FSE +RLAIF EGAS YDK+IGTDE VMGLNLLR WLLRQA+GK+LEVAGGTGRNL+YFP+ LTIIDLC+ MMAETERKLRKSRRGDV FG+MDV++MSFP RTFDTVCDTFGLCSFEDP+ +LQEMERVCKDDGQILLLEHGRS Y WLN ILDKNSHRHTARWGCVWNRDIE + +AGLEVTS++RWHFGTTY+IHAKPG+RE D+ K Sbjct: 1 MRVSVKSLTLGIGSYLGILGGGYYWALSQREAAAKKALAEKAEDAAGKPKRFSETDRLAIFGEGASKYDKEIGTDEIVMGLNLLRWWLLRQARGKILEVAGGTGRNLDYFPKGANLTIIDLCDRMMAETERKLRKSRRGDVLFGKMDVSQMSFPDRTFDTVCDTFGLCSFEDPKVALQEMERVCKDDGQILLLEHGRSTYDWLNEILDKNSHRHTARWGCVWNRDIESLCHDAGLEVTSISRWHFGTTYMIHAKPGRREADRRK 264
BLAST of NO12G01340 vs. NCBI_GenBank
Match: GAY00729.1 (Hypothetical protein PINS_008567, partial [Pythium insidiosum]) HSP 1 Score: 220.3 bits (560), Expect = 1.000e-53 Identity = 107/217 (49.31%), Postives = 143/217 (65.90%), Query Frame = 0 Query: 114 EKAEDEQGNPKQFSEEERLAIFREGASGYDKQIGTDETVMGLNLLRRWLLRQAKGKVLEVAGGTGRNLEYFPQSVELTIIDLCEGMMAETERKLRKSRRGDVTFGRMDVNRMSFPSRTFDTVCDTFGLCSFEDPQQSLQEMERVC-KDDGQILLLEHGRSHYQWLNAILDKNSHRHTARWGCVWNRDIEKMVREAGLEVTSMTRWHFGTTYLIHAKP 330 E +D + + + E R +F A YDK + DET++G++L+RR+LLR A+G+ LEVA GTGRNL ++P +LT+ D GM+ + K+R M + FP TFDTV DTFGLCS +D Q+L+EM+RVC K G+ILLLEHGRSHY WL+++LDK + H RWGC WNRDI MV+ AGLEV ++ R+HFGTTY I A+P Sbjct: 33 EPPQDVKDAVHRMNNERRRDVFDRNADKYDKDVDFDETMIGISLMRRFLLRHARGRALEVAAGTGRNLAFYPSDTQLTLTDFSRGMLDQIP-AASKARVAQCELAVMGAESLEFPDDTFDTVVDTFGLCSMDDGVQALREMQRVCNKQGGRILLLEHGRSHYDWLSSVLDKFAGAHVQRWGCHWNRDILDMVKRAGLEVETLHRFHFGTTYYIIARP 248
BLAST of NO12G01340 vs. NCBI_GenBank
Match: CCI39494.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 219.5 bits (558), Expect = 1.700e-53 Identity = 107/209 (51.20%), Postives = 145/209 (69.38%), Query Frame = 0 Query: 130 ERLAIFREGASGYDKQIGTDETVMGLNLLRRWLLRQAKGKVLEVAGGTGRNLEYFPQSV-ELTIIDLCEGMMAETERKLRKSRRGDVTFGR-----MDVNRMSFPSRTFDTVCDTFGLCSFEDPQQSLQEMERVCKDDGQILLLEHGRSHYQWLNAILDKNSHRHTARWGCVWNRDIEKMVREAGLEVTSMTRWHFGTTYLIHAKPGKR 333 +R IF E A+ YDK I DE +MG++LLRR+LLR +G VLE+A GTGRNL Y+P+SV +LT D GMM + ++K ++ + + R M + FP ++FDTV DTFGLCS D Q++L+EM+RVC+ DG+ILLLEHG+SHY WL+++LDK + H WGC WNRDI +V AGLE+ + R+HFGTTY I A+P +R Sbjct: 574 KRRHIFDENAAKYDKAIDLDEKIMGISLLRRYLLRSCRGDVLEIAAGTGRNLCYYPKSVKQLTFTDFSNGMMEQLKKK-KEFEQAVSSVDRCNCHVMCAEELGFPDQSFDTVIDTFGLCSMVDAQRALEEMQRVCRKDGKILLLEHGQSHYMWLSSLLDKFAGVHAKAWGCQWNRDILALVENAGLEIEDIKRFHFGTTYYIVARPTQR 781
BLAST of NO12G01340 vs. NCBI_GenBank
Match: ETK75747.1 (hypothetical protein L915_17671 [Phytophthora parasitica] >ETL29189.1 hypothetical protein L916_17560 [Phytophthora parasitica] >ETL82425.1 hypothetical protein L917_17401 [Phytophthora parasitica] >ETO64257.1 hypothetical protein F444_18170 [Phytophthora parasitica P1976] >ETP05328.1 hypothetical protein F441_18018 [Phytophthora parasitica CJ01A1] >ETP33472.1 hypothetical protein F442_17991 [Phytophthora parasitica P10297]) HSP 1 Score: 218.0 bits (554), Expect = 5.100e-53 Identity = 107/225 (47.56%), Postives = 143/225 (63.56%), Query Frame = 0 Query: 115 KAEDEQGNPKQFSEEERLAIFREGASGYDKQIGTDETVMGLNLLRRWLLRQAKGKVLEVAGGTGRNLEYFPQSVELTIIDLCEGMMAETERKLRKSRRGDVTFGRMDVNRMSFPSRTFDTVCDTFGLCSFEDPQQSLQEMERVC-KDDGQILLLEHGRSHYQWLNAILDKNSHRHTARWGCVWNRDIEKMVREAGLEVTSMTRWHFGTTYLIHAKPGKREGDQMK 339 K D + RL +F AS YDK++ DE + G++L+RR+LL++A+G+VLEVA GTGRNL ++P S + + D GM+ + K ++ R M ++FP FDTV DTFGLCS +DP ++LQEM+RVC KD G+ILLLEHG+S Y WL+ ILDK + H +WGC WNRDI +V AGLEV ++ R+HFGTTY I AKP G K Sbjct: 30 KKSDNNAATPAVDDARRLQVFDMNASKYDKEVDWDERLTGISLMRRFLLQRARGQVLEVAAGTGRNLAFYPASSRVLLTDFSRGMLDQVS-KAQQQRLASCELKVMSAGELAFPDEQFDTVVDTFGLCSMDDPVRTLQEMQRVCKKDSGRILLLEHGQSSYTWLSGILDKFADLHAQKWGCHWNRDILALVERAGLEVETVHRFHFGTTYYIVAKPQAERGHDQK 253
BLAST of NO12G01340 vs. NCBI_GenBank
Match: XP_008912783.1 (hypothetical protein PPTG_16958 [Phytophthora parasitica INRA-310] >ETN01882.1 hypothetical protein PPTG_16958 [Phytophthora parasitica INRA-310] >KUF84418.1 putative methyltransferase C3B9.04 [Phytophthora nicotianae]) HSP 1 Score: 218.0 bits (554), Expect = 5.100e-53 Identity = 107/225 (47.56%), Postives = 143/225 (63.56%), Query Frame = 0 Query: 115 KAEDEQGNPKQFSEEERLAIFREGASGYDKQIGTDETVMGLNLLRRWLLRQAKGKVLEVAGGTGRNLEYFPQSVELTIIDLCEGMMAETERKLRKSRRGDVTFGRMDVNRMSFPSRTFDTVCDTFGLCSFEDPQQSLQEMERVC-KDDGQILLLEHGRSHYQWLNAILDKNSHRHTARWGCVWNRDIEKMVREAGLEVTSMTRWHFGTTYLIHAKPGKREGDQMK 339 K D + RL +F AS YDK++ DE + G++L+RR+LL++A+G+VLEVA GTGRNL ++P S + + D GM+ + K ++ R M ++FP FDTV DTFGLCS +DP ++LQEM+RVC KD G+ILLLEHG+S Y WL+ ILDK + H +WGC WNRDI +V AGLEV ++ R+HFGTTY I AKP G K Sbjct: 30 KKSDNNAATPAVDDARRLQVFDMNASKYDKEVDWDERLTGISLMRRFLLQRARGQVLEVAAGTGRNLAFYPASSRVLLTDFSRGMLDQVS-KAQQQRLASCELKVMSAGELAFPDEQFDTVVDTFGLCSMDDPVRTLQEMQRVCKKDSGRILLLEHGQSSYTWLSGILDKFADLHAQKWGCHWNRDILALVERAGLEVETVHRFHFGTTYYIVAKPQAERGHDQK 253
BLAST of NO12G01340 vs. NCBI_GenBank
Match: ETI35513.1 (hypothetical protein F443_18147 [Phytophthora parasitica P1569] >ETM35658.1 hypothetical protein L914_17461 [Phytophthora parasitica]) HSP 1 Score: 216.9 bits (551), Expect = 1.100e-52 Identity = 107/225 (47.56%), Postives = 142/225 (63.11%), Query Frame = 0 Query: 115 KAEDEQGNPKQFSEEERLAIFREGASGYDKQIGTDETVMGLNLLRRWLLRQAKGKVLEVAGGTGRNLEYFPQSVELTIIDLCEGMMAETERKLRKSRRGDVTFGRMDVNRMSFPSRTFDTVCDTFGLCSFEDPQQSLQEMERVC-KDDGQILLLEHGRSHYQWLNAILDKNSHRHTARWGCVWNRDIEKMVREAGLEVTSMTRWHFGTTYLIHAKPGKREGDQMK 339 K D + RL +F AS YDK++ DE + G++L+RR+LL++A G+VLEVA GTGRNL ++P S + + D GM+ + K ++ R M ++FP FDTV DTFGLCS +DP ++LQEM+RVC KD G+ILLLEHG+S Y WL+ ILDK + H +WGC WNRDI +V AGLEV ++ R+HFGTTY I AKP G K Sbjct: 30 KKSDNNAATPAVDDARRLQVFDMNASKYDKEVDWDERLTGISLMRRFLLQRAHGQVLEVAAGTGRNLAFYPASSRVLLTDFSRGMLDQVS-KAQQQRLASCELKVMSAGELAFPDEQFDTVVDTFGLCSMDDPVRTLQEMQRVCKKDSGRILLLEHGQSSYTWLSGILDKFADLHAQKWGCHWNRDILALVERAGLEVETVHRFHFGTTYYIVAKPQAERGHDQK 253
BLAST of NO12G01340 vs. NCBI_GenBank
Match: CCA17583.1 (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 216.5 bits (550), Expect = 1.500e-52 Identity = 105/210 (50.00%), Postives = 142/210 (67.62%), Query Frame = 0 Query: 125 QFSEEERLAIFREGASGYDKQIGTDETVMGLNLLRRWLLRQAKGKVLEVAGGTGRNLEYFPQSV-ELTIIDLCEGMMAETERKLR----KSRRGDVTFGRMDVNRMSFPSRTFDTVCDTFGLCSFEDPQQSLQEMERVCKDDGQILLLEHGRSHYQWLNAILDKNSHRHTARWGCVWNRDIEKMVREAGLEVTSMTRWHFGTTYLIHAKP 330 Q +R IF E A YDK I DE +MG++L+RR+LLR VLEVA GTGRNL Y+P+SV +LT+ID +GM+ + ++K S M + FP ++FDTV DTFGLCS +D + +L+EM+RVC+ DG+ILLLEHG+SHY+WL+++LDK + H WGC WNRDI +VR+A LE+ + R+HFGTTY I A+P Sbjct: 42 QLDNAKRRHIFNENAVKYDKAIDLDEKLMGISLMRRYLLRSCSENVLEVAAGTGRNLGYYPRSVKQLTLIDFSDGMVEQLKKKYEFEQIVSTMDQCDCHVMRAEELQFPDQSFDTVIDTFGLCSMDDAKSALREMQRVCRKDGKILLLEHGQSHYKWLSSLLDKFAGVHAKAWGCQWNRDILALVRDAELEIEDIKRFHFGTTYYIVARP 251
BLAST of NO12G01340 vs. NCBI_GenBank
Match: OQR99011.1 (hypothetical protein ACHHYP_07494 [Achlya hypogyna]) HSP 1 Score: 216.1 bits (549), Expect = 1.900e-52 Identity = 114/253 (45.06%), Postives = 154/253 (60.87%), Query Frame = 0 Query: 77 VSVKNMTLGVGSYLGIIGGGYWWALSQREDAAKKELGEKAEDEQGNPKQFSEEERLAIFREGASGYDKQIGTDETVMGLNLLRRWLLRQAKGKVLEVAGGTGRNLEYFPQSVELTIIDLCEGMMAETERKLRKSRRGDVTFGRMDVNRMSFPSRTFDTVCDTFGLCSFEDPQQSLQEMERVCKDDGQILLLEHGRSHYQWLNAILDKNSHRHTARWGCVWNRDIEKMVREAGLEVTSMTRWHFGTTYLIHAKP 330 +++K + L VG L + G G A D +K N S+ ER A F ++ YDK IG DET+ G+ L+RR+LL+ A G +LEVA GTGRNL Y+ + + + DL M+A+ + L S + V M ++ PS +FDTV DTF LCS P L EM+RVCK G+ILLLEHGRSHY WL+ +LDK + +H RWGC+WNRDI ++V +AGLEV ++ R+HFGTTY I A+P Sbjct: 1 MALKKVALAVGG-LSVYGTGVLAAYVYMYDPSK-----------DNANHISDAERQARFDANSAQYDKDIGMDETMAGIGLMRRFLLKHASGAILEVAAGTGRNLPYYAKDANVLLTDLSVNMLAQIQH-LHPSMKTAV----MSAEDLTLPSESFDTVIDTFALCSVNRPDLMLAEMQRVCKPGGKILLLEHGRSHYDWLSYVLDKFAAKHAERWGCLWNRDILQIVADAGLEVETVHRFHFGTTYYIVARP 236
BLAST of NO12G01340 vs. NCBI_GenBank
Match: XP_008614064.1 (hypothetical protein SDRG_09882 [Saprolegnia diclina VS20] >EQC32563.1 hypothetical protein SDRG_09882 [Saprolegnia diclina VS20]) HSP 1 Score: 213.8 bits (543), Expect = 9.500e-52 Identity = 100/204 (49.02%), Postives = 142/204 (69.61%), Query Frame = 0 Query: 127 SEEERLAIFREGASGYDKQIGTDETVMGLNLLRRWLLRQAKGKVLEVAGGTGRNLEYFPQSVELTIIDLCEGMMAETERKLRKSRRGDVTFGRMDVNRMSFPSRTFDTVCDTFGLCSFEDPQQSLQEMERVC-KDDGQILLLEHGRSHYQWLNAILDKNSHRHTARWGCVWNRDIEKMVREAGLEVTSMTRWHFGTTYLIHAKP 330 S+ ER A F ++ YD++IGTDET+ G+ L+RR+LL+ A+G +LEVA GTGRNL Y+ ++ + DL M+A+ E R + R ++ M ++ P+ +FDTV DTF LCS + P L EM+RVC K+ G+ILLLEHGRSHY WL+ +LDK + +H RWGC+WNRDI ++V +AGL + ++ R+HFGTTY I A+P Sbjct: 39 SDAERQARFDRNSAQYDQEIGTDETMAGIGLMRRFLLKHAQGSILEVAAGTGRNLPYYAPEADVLLTDLSASMLAQIE---RSNLRANMKTAVMSAEALNLPTDSFDTVIDTFALCSVDHPDVMLAEMQRVCKKNGGKILLLEHGRSHYDWLSYVLDKFAAKHAERWGCLWNRDILQIVADAGLHIETIHRFHFGTTYYIVARP 239
BLAST of NO12G01340 vs. NCBI_GenBank
Match: KUF77961.1 (putative methyltransferase C3B9.04 [Phytophthora nicotianae]) HSP 1 Score: 213.8 bits (543), Expect = 9.500e-52 Identity = 102/201 (50.75%), Postives = 136/201 (67.66%), Query Frame = 0 Query: 139 ASGYDKQIGTDETVMGLNLLRRWLLRQAKGKVLEVAGGTGRNLEYFPQSVELTIIDLCEGMMAETERKLRKSRRGDVTFGRMDVNRMSFPSRTFDTVCDTFGLCSFEDPQQSLQEMERVC-KDDGQILLLEHGRSHYQWLNAILDKNSHRHTARWGCVWNRDIEKMVREAGLEVTSMTRWHFGTTYLIHAKPGKREGDQMK 339 AS YDK++ DE + G++L+RR+LL++A+G+VLEVA GTGRNL ++P S + + D GM+ + K ++ R M ++FP FDTV DTFGLCS +DP ++LQEM+RVC KD G+ILLLEHG+S Y WL+ ILDK + H +WGC WNRDI +V AGLEV ++ R+HFGTTY I AKP G K Sbjct: 3 ASKYDKEVDWDERLTGISLMRRFLLQRARGQVLEVAAGTGRNLAFYPASSRVLLTDFSRGMLDQVS-KAQQQRLASCELKVMSAGELAFPDEQFDTVVDTFGLCSMDDPVRTLQEMQRVCKKDSGRILLLEHGQSSYTWLSGILDKFADLHAQKWGCHWNRDILALVERAGLEVETVHRFHFGTTYYIVAKPQAERGHDQK 202 The following BLAST results are available for this feature:
BLAST of NO12G01340 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO12G01340 ID=NO12G01340|Name=NO12G01340|organism=Nannochloropsis oceanica|type=gene|length=2414bpback to top protein sequence of NO12G01340.1 >NO12G01340.1-protein ID=NO12G01340.1-protein|Name=NO12G01340.1|organism=Nannochloropsis oceanica|type=polypeptide|length=384bpback to top Synonyms
Publications
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