NO12G01320, NO12G01320 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO12G01320 vs. NCBI_GenBank
Match: XP_005855470.1 (wd40 repeat-containing protein, partial [Nannochloropsis gaditana CCMP526] >XP_005856236.1 wd40 repeat-containing protein, partial [Nannochloropsis gaditana CCMP526] >EKU20123.1 wd40 repeat-containing protein, partial [Nannochloropsis gaditana CCMP526] >EKU20890.1 wd40 repeat-containing protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 349.7 bits (896), Expect = 1.100e-92 Identity = 189/337 (56.08%), Postives = 227/337 (67.36%), Query Frame = 0 Query: 68 RPTLKPTSSSSQKGHIGPITSLCPSPDHPSLFVSSSEDKTVRLWDIRGPNKNACTAVINQEDEALSCTLGIGTELLAVGVGNAIDFFDSRXXXXXXXXXXW--------------------------------------EGSEDGLICLYDTGVGQADEALVCILNAECPVRDLTFFGVEGDGLALLTGSEGTMVWHWPSAARALKIDDLRQAVPSMGIKEVGEQGGGGLFSVKYHYDQGGDRLLLALSDVEGQLTVLQVMPGGGMHPVMQLQQGHTALVRAVDLWDGSWVTGGEDARLCLWGCKVEAGEGVAATRGTEKMTKKKKGKEIA-HYKPY 366 R TL+P SSS+ +GH+GP+T LCPSPDHPSL SSSEDKTVRLWD+R ++ C +VI Q DEALSC G G+ LLAVGVG +DFFD+R XXXXXX SEDGL+CLYDTGV QADEAL CILNAE PVRD+TFFG +GDGLALLTGSEGT VWHWPSA RAL ++DLRQ+ S ++ LFS++YHYDQG DRL LALSDVEG +TV++V PGG MHP+++L+ GH LVRAVD +G+WVTGGEDARLCLW K + G+ + T K+KKGK+ A H++PY Sbjct: 1 RYTLEPKSSSALEGHLGPLTGLCPSPDHPSLLASSSEDKTVRLWDLR--VQSGCVSVIQQVDEALSCAFGKGSGLLAVGVGCHVDFFDARQTKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVFHPSQTTTLASASEDGLVCLYDTGVSQADEALACILNAESPVRDMTFFGAKGDGLALLTGSEGTSVWHWPSALRALDVEDLRQSAGSFNREK-------ALFSIQYHYDQGTDRLRLALSDVEGSVTVVEVQPGGEMHPLLRLESGHKCLVRAVDSHNGTWVTGGEDARLCLWNEKEQEGQ---VNQSTAFDRKQKKGKKFAPHFQPY 325
BLAST of NO12G01320 vs. NCBI_GenBank
Match: OQS04043.1 (hypothetical protein THRCLA_03687 [Thraustotheca clavata]) HSP 1 Score: 152.1 bits (383), Expect = 3.300e-33 Identity = 106/344 (30.81%), Postives = 152/344 (44.19%), Query Frame = 0 Query: 10 PRMLRPSKTQITTLQ--APVSMGTEDFNGDDNEYILHCVHACDGSTVTAALSNYHIKTYDRPTLKPTSSSSQKGHIGPITSLCPSPDHPSLFVSSSEDKTVRLWDIRGPNKNACTAVINQEDEALSCTLGIGTELLAVGVGNAIDFFDSRXXXXXXXXXXWE-------------------GSEDGLICLYDTGVGQADEALVCILNAECPVRDLTFFGVEGDGLALLTGSEGTMVWHWPSAARALKIDDLRQAVPSMGIKEVGEQGGGGLFSVKYHYDQGGDRLLLALSDVEGQLTVLQVMPGGGMHPVMQLQQGHTALVRAVDLWDGSW-VTGGEDARLCLW 332 P+ L + T +T + A ++M TED D EY+L C ALS+ I+ R TL T H I +C S P VS S D T++LWD+R N N I E SC++G G L+ G + F+D+R SEDG++CL+D + DEA++ I+N E V FFG E A LTGSE +W+ +A R +R A ++ + + + YD + L L D G + +LQ+ G + P +L GH A +R +D WDG+ +TGGED+RLC W Sbjct: 6 PQALALNGTIVTHFKQDASLTMTTED---QDYEYVLDCKTNASKDHAILALSDKTIQARSRSTL--TCERVIAAHTNSINEICVSETEPWCVVSGSSDGTIKLWDLR-VNANTAAQTIPVRTEVWSCSIGCGDTLVVCGTEDRAVFYDTRTTRKLGEYGESHMDNVTRVRFHPLRRSEVVTASEDGIVCLFDCTIADEDEAIISIINVESAVTQFAFFGPELHNFACLTGSETLDLWNITTAQRIAHFPQIRDACNALNMPTE--------YLIDCKYDPTTNALHLITGDHAGTVNILQL--GESLTPEAKLTGGHKAAIRCID-WDGNMLLTGGEDSRLCKW 332
BLAST of NO12G01320 vs. NCBI_GenBank
Match: OQR92392.1 (hypothetical protein ACHHYP_03749 [Achlya hypogyna]) HSP 1 Score: 146.0 bits (367), Expect = 2.300e-31 Identity = 107/348 (30.75%), Postives = 152/348 (43.68%), Query Frame = 0 Query: 6 AAFAPRMLRPSKTQIT--TLQAPVSMGTEDFNGDDNEYILHCVHACDGSTVTAALSNYHIKTYDRPTLKPTSSSSQKGHIGPITSLCPSPDHPSLFVSSSEDKTVRLWDIRGPNKNACTAVINQEDEALSCTLGIGTELLAVGVGNAIDFFDSRXXXXXXXXXXWE-------------------GSEDGLICLYDTGVGQADEALVCILNAECPVRDLTFFGVEGDGLALLTGSEGTMVWHWPSAARALKIDDLRQAVPSMGIKEVGEQGGGGLFSVKYHYDQGGDRLLLALSDVEGQLTVLQVMPGGGMHPVMQLQQGHTALVRAVDLWDGS-WVTGGEDARLCLW 332 A P+ L T +T A + M TED D EY+L C V ALS+ ++ +R TL T H I +C S P VS S D T++LWD+R + A T I E S ++G G L+ G + F+D+R SEDG++CL+D + DEA++ I+N E V FFG E +A LTGSE +W+ +A R ++RQA ++ + F + YD + L L D G + + + G + P +L GH VR VD WDG+ +TGGED+RLC W Sbjct: 2 ALATPQTLGLQSTVVTHFAQHATLQMTTED---QDYEYVLDCKTTATKDHVVLALSDKTLQARNRSTL--TCDRVINAHTNSINEICVSETEPWCVVSGSSDGTIKLWDLRTNGQAAQT--IGVRTEVWSVSMGCGDTLVVCGTEDRAVFYDTRSAGKLGEYGESHMDNVTRVRFHPLRRSEVVTASEDGVVCLFDCTIADEDEAIISIVNVESAVTQFAFFGHELHNMAFLTGSETLDLWNITTAQRIAHFPEIRQACNALHMPTE--------FLIDCKYDTTTNVLHLITGDHSGTVNIAAL--GDNLVPEAKLMGGHKTAVRCVD-WDGTCLLTGGEDSRLCKW 331
BLAST of NO12G01320 vs. NCBI_GenBank
Match: XP_008606657.1 (hypothetical protein SDRG_02831 [Saprolegnia diclina VS20] >EQC40183.1 hypothetical protein SDRG_02831 [Saprolegnia diclina VS20]) HSP 1 Score: 140.2 bits (352), Expect = 1.300e-29 Identity = 103/361 (28.53%), Postives = 154/361 (42.66%), Query Frame = 0 Query: 10 PRMLRPSKTQITTLQ--APVSMGTEDFNGDDNEYILHCVHACDGSTVTAALSNYHIKTYDRPTLKPTSSSSQKGHIGPITSLCPSPDHPSLFVSSSEDKTVRLWDIR---GPNKNACTAVINQEDEALSCTLGIGTELLAVGVGNAIDFFDSRXXXXXXXXXXWE-------------------GSEDGLICLYDTGVGQADEALVCILNAECPVRDLTFFGVEGDGLALLTGSEGTMVWHWPSAARALKIDDLRQAVPSMGIKEVGEQGGGGLFSVKYHYDQGGDRLLLALSDVEGQLTVLQVMPGGGMHPVMQLQQGHTALVRAVDLWDGSWVTGGEDARLCLWGCKVEAGEGVAATRG 347 P+ L S T +T + A + M ED D EY++ C V ALS+ ++ R TL T H I +C S P +S S D T++LWD+R GP ++ I E +C++G G L+ G + F+D+R SEDG++CL+D + D+A++ I+N E V FFG E +A LTGSE +W+ +A R +R A ++ + + + YD D+L L D G + + + + P +L GH VR +D D +TGGED+RLC W +G ATRG Sbjct: 6 PQTLALSSTVVTHFKQDATLQMTRED---QDYEYVMDCKTTASKDHVILALSDKTLQARSRSTL--TCDRVIAAHNASINEVCVSETSPWCVLSGSNDGTMKLWDLRTDQGPAQS-----IRVGSEVWTCSMGCGDTLVVCGTNDRAVFYDTRTARKLGEYGESHMDNVTRVRFHPLRRSEVVTASEDGVVCLFDCTIADEDDAIISIINVESAVTQFAFFGHELHNMAFLTGSETLDLWNITTAQRLAHFPQIRDACNALHMPTE--------YLIDCKYDATSDQLHLVTGDHAGTVNI-ATLGESSLTPQAKLVGGHKTAVRCIDWDDNMLLTGGEDSRLCKW--SASSGLQQQATRG 345
BLAST of NO12G01320 vs. NCBI_GenBank
Match: XP_009833216.1 (hypothetical protein H257_08846 [Aphanomyces astaci] >ETV77429.1 hypothetical protein H257_08846 [Aphanomyces astaci]) HSP 1 Score: 138.3 bits (347), Expect = 4.900e-29 Identity = 93/313 (29.71%), Postives = 134/313 (42.81%), Query Frame = 0 Query: 38 DNEYILHCVHACDGSTVTAALSNYHIKTYDRPTLKPTSSSSQKGHIGPITSLCPSPDHPSLFVSSSEDKTVRLWDIRGPNKNACTAVINQEDEALSCTLGIGTELLAVGVGNAIDFFDSRXXXXXXXXXXWE-------------------GSEDGLICLYDTGVGQADEALVCILNAECPVRDLTFFGVEGDGLALLTGSEGTMVWHWPSAARALKIDDLRQAVPSMGIKEVGEQGGGGLFSVKYHYDQGGDRLLLALSDVEGQLTVLQVMPGGGMHPVMQLQQGHTALVRAVDLWDGSWVTGGEDARLCLW 332 D EY+L C V ALS+ I+ R TL + H I L S P +S S D T+++WD+R ++ A I +E SC++G G L+ G ++ FFD R S+DG++CL+D + DEA + +N E V FG + +A+LTGSE VW+ +A R +R S G + V Y+ D+L LA + +GQL V Q+ P G+ L GH A +R +D +TGGEDAR+C W Sbjct: 34 DYEYVLDCKTTASKDHVLLALSDRTIQARSRATL--SCERQFTAHTDTINELVISETQPWNVISGSNDGTIKVWDLR-QSQPAAVQTIRVGEEVWSCSVGCGDTLVVAGAADSAVFFDLRTLRKLGQYGESHMDNVTRVQFHPVRRSEVITASDDGIVCLFDCTIADEDEATISTINVESSVSRFCMFGPDLHNIAVLTGSETLDVWNLTTAERLAHFPTIRDQCSS------SSAGLHTDYLVDCKYNAASDQLHLATGNHQGQLNVFQLNPQAGIVHQATLSGGHKAAIRCLDWQADMLLTGGEDARVCQW 337
BLAST of NO12G01320 vs. NCBI_GenBank
Match: XP_008874846.1 (hypothetical protein H310_10284 [Aphanomyces invadans] >ETV96583.1 hypothetical protein H310_10284 [Aphanomyces invadans]) HSP 1 Score: 137.1 bits (344), Expect = 1.100e-28 Identity = 89/313 (28.43%), Postives = 132/313 (42.17%), Query Frame = 0 Query: 38 DNEYILHCVHACDGSTVTAALSNYHIKTYDRPTLKPTSSSSQKGHIGPITSLCPSPDHPSLFVSSSEDKTVRLWDIRGPNKNACTAVINQEDEALSCTLGIGTELLAVGVGNAIDFFDSRXXXXXXXXXXWE-------------------GSEDGLICLYDTGVGQADEALVCILNAECPVRDLTFFGVEGDGLALLTGSEGTMVWHWPSAARALKIDDLRQAVPSMGIKEVGEQGGGGLFSVKYHYDQGGDRLLLALSDVEGQLTVLQVMPGGGMHPVMQLQQGHTALVRAVDLWDGSWVTGGEDARLCLW 332 D EY+L C ALS+ I+ R TL + + H I L S P +S S D T+++WD+R +A I +E SC++G G L+ ++ F+D R S+DG++CL+D + D+A + +N E V FG + +A LTGSE VW+ +A R +R + + F V YD D+L LA + +GQL + Q+ P G+ L GH A +R +D D +TGGEDAR+C W Sbjct: 34 DYEYVLDCKTTMSKEHALLALSDRTIQARSRATL--SCERQFEAHSDTINELVVSETQPWSVISGSNDGTIKVWDLRQAQPSA-VQTIRVGEEVWSCSVGCGDTLVVAAAADSAVFYDLRTLRKLGQYGESHMDNVTRVQFHPLRRSEVITASDDGIVCLFDCTIANEDDATISTINVESSVSRFCMFGPDSHNIACLTGSETLDVWNLTTAERLAHFSTIRDQCSAAPMLHTD-------FLVDCKYDPTTDQLHLATGNHQGQLNLFQLNPQAGILHEATLSGGHKAAIRCLDWHDDMLLTGGEDARVCQW 336
BLAST of NO12G01320 vs. NCBI_GenBank
Match: XP_012204962.1 (hypothetical protein SPRG_10447 [Saprolegnia parasitica CBS 223.65] >KDO24369.1 hypothetical protein SPRG_10447 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 134.0 bits (336), Expect = 9.200e-28 Identity = 102/382 (26.70%), Postives = 160/382 (41.88%), Query Frame = 0 Query: 10 PRMLRPSKTQITTLQ--APVSMGTEDFNGDDNEYILHCVHACDGSTVTAALSNYHIKTYDRPTLKPTSSSSQKGHIGPITSLCPSPDHPSLFVSSSEDKTVRLWDIR---GPNKNACTAVINQEDEALSCTLGIGTELLAVGVGNAIDFFDSRXXXXXXXXXXWE-------------------GSEDGLICLYDTGVGQADEALVCILNAECPVRDLTFFGVEGDGLALLTGSEGTMVWHWPSAARALKIDDLRQAVPSMGIKEVGEQGGGGLFSVKYHYDQGGDRLLLALSDVEGQLTVLQVMPGGGMHPVMQLQQGHTALVRAVDLWDGSWVTGGEDARLCLWGC-----KVEAGEGVAATRGTEKMTKKKKGKEIAHY 363 P+ L S T +T + A + M ++D D EY++ C V ALS+ ++ R TL H I +C S P +S S D T++LWD+R GP ++ I E +C++G G L+ G + F+D+R SEDG++CL+D + D+A++ I+N E V FFG E +A LTGSE +W+ +A R +R A ++ + + + YD D+L L D G + + + + P +L GH +R +D D +TGGED+RLC W + +A G+ A+ + KK K Y Sbjct: 6 PQTLALSSTVVTHFKQDATLQMTSDD---QDYEYVMDCKTTASKEHVILALSDKTLQARSRSTL--ACDRVIAAHNASINEVCVSETSPWCVLSGSNDGTMKLWDLRTDQGPAQS-----IRVGSEVWTCSMGCGDTLVVCGTTDRAVFYDTRTARKLGEYGESHMDNVTRVRFHPLRRSEVVTASEDGVVCLFDCTIADEDDAIISIINVESAVTQFAFFGHELHHMAFLTGSETLDLWNITTAQRLAHFPQIRDACNALDMPTE--------YLIDCKYDATSDQLHLVTGDHAGTVNI-ATLGESSLTPQAKLVGGHKTAIRCIDWDDNMLLTGGEDSRLCKWSASSGLFQQQATRGIRASVERDVSGLKKARKSSRPY 368
BLAST of NO12G01320 vs. NCBI_GenBank
Match: CBN75588.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 133.3 bits (334), Expect = 1.600e-27 Identity = 78/230 (33.91%), Postives = 107/230 (46.52%), Query Frame = 0 Query: 31 TEDFNGDDNEYILHCVHACDGSTVTAALSNYHIKTYDRPTLKPTSSSSQKGHIGPITSLCPSPDHPSLFVSSSEDKTVRLWDIRGPNKNACTAVINQEDEALSCTLGIGTELLAVGVGNAIDFFDSR--------------------XXXXXXXXXXWEGSEDGLICLYDTGVGQADEALVCILNAECPVRDLTFFGVEGDGLALLTGSEGTMVWHWPSAARALKIDDLR 241 ++D +G EY+ +CD + AALS+ + Y T+ + KGH GP+T L +P PS F S+SED TVR WD R +E+E S LG L A G I+F+D R GSEDGL+C +DT V ++AL ++NAECPVR + FFG EG+G+ T +E +WH A R D+R Sbjct: 38 SDDDDGPRLEYVTQLEMSCDNKQLAAALSSLEVNLYSVETM--ALAGKVKGHTGPLTQLAFAPSDPSSFFSASEDGTVRGWDTRSLATTITLGESGEEEEIYSMALGYDGRLCATGKDCLIEFYDLRKAGKPLGSYSECHTDAVTQVRFHPHKRSFMLTGSEDGLMCFFDTEVSLEEDALDSVMNAECPVRSVGFFGPEGEGVYCCTNTETLSLWHAAGAQRIKDFGDVR 265
BLAST of NO12G01320 vs. NCBI_GenBank
Match: XP_002288251.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED93687.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 119.4 bits (298), Expect = 2.300e-23 Identity = 99/319 (31.03%), Postives = 137/319 (42.95%), Query Frame = 0 Query: 79 QKGHIGPITSLC----------PSPD----HPSLFVSSSEDKTVRLWDIRGPNKNACT---AVINQE-----DEALSCTLGIGTELLAVGVGNA-IDFFDSRXXXXXXXXXXWEG-------------------------------SEDGLICLYDTGVGQADEALVCILNAECPVRDLTFFGVEGDGLALLTGSEGTMVWHWPSAARALKID--DLRQAVPSMGIKEVGEQGGGGLFSVKYHY--------DQGGDRLLLALSDVEGQLTVLQVMPGGGMHPVMQLQQGHTALVRAVDLWD--GSWVTGGEDARLCLW 332 +K H GPI+ L P+ D P L +S+S+D TV+++D+R N NA T A I + ++AL +LG G L AVG A + FFD R W G SEDGL+ +YD D AL+ LN P+R++ FFG +G+ LTG+E VWHW SA + + LRQ + G G +V+Y D D L L + +G + ++ + PV+ L+ GH +R WD G VTGGEDARLC W Sbjct: 85 EKAHDGPISELSFFPADYYGLGPNADGNNLQPPLLISTSQDGTVKIYDLRCSN-NASTISSAEITSKLQLPNEQALCVSLGYGGTLAAVGTSKARVSFFDLRYTSGSRPSGNWMGNYVDAHTDEVTQVRFQTVTQASQAKTVLATASEDGLLSVYDPSQPSEDAALLSTLNVGTPIRNIGFFGPNYEGVYALTGNETMSVWHWDSAQKVSECGGYGLRQLLSDSAAGTFGVVCEGEGSAVEYLVGCSWAPVNDSTADALHLIAGNNQGDGFIFRI-DASQITPVIHLKGGHKGCIRDF-YWDNSGRLVTGGEDARLCEW 400
BLAST of NO12G01320 vs. NCBI_GenBank
Match: GAY04136.1 (Hypothetical protein PINS_011950, partial [Pythium insidiosum]) HSP 1 Score: 118.2 bits (295), Expect = 5.200e-23 Identity = 89/340 (26.18%), Postives = 138/340 (40.59%), Query Frame = 0 Query: 16 SKTQITTLQAPVSMGTEDFNGDDNEYILHCVHACDGSTVTAALSNYHIKTYDRPTLKPTSSSSQKGHIGPITSLCPSPDHPSLFVSSSEDKTVRLWDIRGPNKNACTAVINQEDEALSCTLGIGTELLAVGVGNAIDFFDSRXXXXXXXXXXWE-------------------GSEDGLICLYDTGVGQADEALVCILNAECPVRDLTFFGVEGDGLALLTGSEGTMVWHWPSAARALKIDDLRQAVPSMGIKEVGEQGGGGLFSVKYHYDQGGDRLLLALSDVEGQLTVLQVMPGGG---MHPVMQLQQGHTALVRAV--DLWDGSWVTGGEDARLCLW 332 ++T +T S+ + D +Y+L C + ALSN+ ++ +R +L + H I + S P + S D+TV+ WD+R N + VI E S ++G G LL G F+D R SEDG++C +D + D+A+ ILN E V + FFG + + + LTG+E +W+ +A R LR+ + G+ + + YD L L D G L V+ + GGG + + GH A +R+ D + TGGEDARLC W Sbjct: 12 AQTAVTNFGQGASLVANPTDEFDYDYVLDCQPTAQRGPLAIALSNFKVQLRNRESL--AQEAEFIAHDSTINEIWTSAVSPWQIATCSSDETVKFWDLRTRN---ASMVIPFGQEVWSLSVGCGDSLLVGGTNXKAHFYDVRMGKKLGAYGESHIDAVTRVRFHPLNPPYVVTASEDGVVCFFDCRIPNEDDAVESILNVESAVTKIGFFGPQYENIFCLTGTETLDLWNVWTAERIHHYQTLREDCTANGVPTD--------YLIDCVYDAASTELFLLAGDHNGSLNVVNI--GGGNAQLRHEAAMTGGHKACIRSAYYDAEQATLYTGGEDARLCRW 336 The following BLAST results are available for this feature:
BLAST of NO12G01320 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO12G01320 ID=NO12G01320|Name=NO12G01320|organism=Nannochloropsis oceanica|type=gene|length=1531bpback to top protein sequence of NO12G01320.1 >NO12G01320.1-protein ID=NO12G01320.1-protein|Name=NO12G01320.1|organism=Nannochloropsis oceanica|type=polypeptide|length=366bpback to top Synonyms
Publications
|