NO12G01310, NO12G01310 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO12G01310 vs. NCBI_GenBank
Match: EWM25898.1 (hypothetical protein Naga_100048g28 [Nannochloropsis gaditana]) HSP 1 Score: 1112.8 bits (2877), Expect = 0.000e+0 Identity = 601/1075 (55.91%), Postives = 729/1075 (67.81%), Query Frame = 0 Query: 34 AAHVS-TDVNAQDNPATQA--KRRSLSLLVGWALLAGAVILGLVLSIWRNETKHQ-LVKQVLPPSRIMLGSPPPQDVPILGTHCCTTEFNLETFAFAGESALTRSFD---GKNPKAPPSLESQLFRQAVVNAAGNDSTGSRSKQRLSGGCYLIMTQHRGEGGLEGVLGRLDRHFTRFHRYPVVVFLAAWNLTQESQDRLRAIAPSTTIDFRPVPRLQEQYQAREAVRRDHAGEAKSGKSSAVTAAAAAFERSLWEFRVSEAPRLLSKQYEWVLHLSEDTLLSENVLIDPFEALKATSRKLGYMTAHRPVDEESLWAFGRSFVLQHQFDKNGHTKEDSAMNLTWNVAKAMDGRWIAFHQTVFTSELYQALVVGLASSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDSPLSSPAEH-----GQKQQQHTRAPTAFLDARDIFFNAFF-----XXXXXXXXXXXXXXXXXXAFQRQLDDTIAASAPAPTGMFTINLPDPSAVLTLGSLITLAPDDFMQYRGLNMRRPPKKNTSGSGPAVEGLSLEEAAGVTRSSWRGVAITATEAEDLQPLFAVRDEGWLGADVATSFRFPPQRP---------------------GRKXXXXXXXXXXXXXAGKYMWLFGDTLLGYANQDRRLAGAFFLHNSVAFLPAFNMSDASVSGPMAEDVYFSWNVSRGGCPTSIFIRGTPVDNECVHTQEYLWPISGIGVSY----TEKKGRAKGEAGKEGKGEE------QEEEVSKVVVLAVRWAYVQSSVMASVDLFDDNVFNFKILGTTVIVVDNPHADPSEWRYRQKDIPGTDGNLNWYSAMMHSSKGAELATGPDDVIYLFGVNNTEAEGTPPQQWQYETMARLPARSLVDLSFKNMEVWAFTKTFPRSPSQPFKQKTNIXXXXXXXXXXXXXXXPTSDR-PNTTWASYPAFLRRHMNAAPLVFPVFSETSVQYSSALGVYYGVVVDWLASHIVLYLADDLIREWEPVVVYKIPPPFNDPAVYLTYAGKAHPELARENEIILTFMTNAPGDLEPLFETGAKDVYVPRFLRLTLEKPLLEA 1060 AAH S + +Q + AT K+RSL +L W AG VILGLVL+I NE++ Q L+++ PSR+MLG PP QDVPILGTHCCTTE+ LE A ++ + ++ GK+ +APPSLE++LFR+AV +A DSTG+ Q LSG YL++T R E L +L RL HF R HRYPVVV+LA+ NLTQ+S+D L+A PS+ +DFRPVP L EQ+QA +A K + + AAA+ER+LW+F+VSEAPRLL++++EW+LHLSEDTLLS++VL+DPF AL+ T R+LGYM AHR VDEE LWAFGR F QH + G K ++A++LTWNV KA+D RWIA+H++VFTSELY+ +VV LA+S SP ++P + Q ++ P+A DA D+ + A R + AA +P+ M ++ LPDP+AVLTLGSL+TL D+FMQYRGLN+ RPPK+ T G ++GLS EEAAGVTRSSWRG+ I ATEAEDLQPLF+VR+ GWLGADVATSFRFPP+ P GR GKYMWLFGDTLLGYAN+DRRL+GAFFLHNSVAFLP N+SD EDV F+WNVS+GGCP SIF+RG P D+ECVHTQ+YLWPISGIGVSY EKKG G+ G+ G E + + VSKV+VLAVRWAYV+S ASVDLFDDN FNF ILGTTV+VVDNPHA P++W YRQ+D+PGTD NLNWYSAMMH K AELATGP+D+IYLFGVNNTEA GTPPQQWQYET++RLP RSLVDLSF++MEVWA TK P +Q T R NTTWA YP FL RH+ AAPLVFPVFSETSV+YS +LG YYGVVVDWL+S++VLYLA+DL WEPVVVYKIPPPFNDPAVY+TYAGKAHPEL+RE+E+ILTFMTNAPGDLEPLFETGAKDVYVPRFLRL LE+P +A Sbjct: 30 AAHASLRPIQSQFSGATPVWRKQRSLLILGAWMAFAGLVILGLVLTISHNESRRQRLLERGSLPSRVMLGPPPSQDVPILGTHCCTTEYGLEASTMAAQATNSAAWSMGHGKHSRAPPSLEARLFREAVADA---DSTGAGGNQGLSGVVYLVVTPRRTEDALGQLLRRLHEHFLRLHRYPVVVYLASENLTQDSRDHLQATVPSSIVDFRPVPDLLEQHQALQA----QGSSGTERKPAILRPEAAAYERALWDFQVSEAPRLLAQEFEWILHLSEDTLLSQDVLLDPFHALRMTDRRLGYMAAHRAVDEEGLWAFGRKFAEQHVLARKG--KGEAALHLTWNVPKAIDARWIAYHKSVFTSELYRLMVVALAASPLTDTLPAST------------------------PSPTNAPKDASLSRLSQGRRPPLSLPSALFDAGDVLLDPSVAAIAAAVSSSSPTSPSSRIQSEVALDRYRKEGEAAPSPS---MVSLRLPDPAAVLTLGSLVTLTQDEFMQYRGLNLERPPKR-TDG----LQGLSPEEAAGVTRSSWRGIEIIATEAEDLQPLFSVRNAGWLGADVATSFRFPPRHPTGLRTSGVATSTSDATQGPGDGRTEGPKKEGDVGEAEHGKYMWLFGDTLLGYANEDRRLSGAFFLHNSVAFLPVINVSDPRAKPLGPEDVVFAWNVSKGGCPVSIFVRGPPQDDECVHTQDYLWPISGIGVSYLEPRAEKKGNVNGKRGRGDSGSEFDSSTAEGDVVSKVIVLAVRWAYVKSHT-ASVDLFDDNAFNFNILGTTVLVVDNPHAHPTQWEYRQRDLPGTDANLNWYSAMMHGDKDAELATGPEDMIYLFGVNNTEAVGTPPQQWQYETLSRLPVRSLVDLSFRDMEVWALTKGSPDEKAQ--------------------ATTDTDTRLTNTTWAPYPLFLHRHLKAAPLVFPVFSETSVRYSHSLGAYYGVVVDWLSSNVVLYLAEDLTEAWEPVVVYKIPPPFNDPAVYMTYAGKAHPELSREDELILTFMTNAPGDLEPLFETGAKDVYVPRFLRLKLERPAPKA 1042
BLAST of NO12G01310 vs. NCBI_GenBank
Match: EWM21594.1 (hypothetical protein Naga_100012g47 [Nannochloropsis gaditana]) HSP 1 Score: 255.4 bits (651), Expect = 8.000e-64 Identity = 179/561 (31.91%), Postives = 268/561 (47.77%), Query Frame = 0 Query: 548 KKNTSG---------SGPAVEGLSLEEAAGVTRS-SWRGVAITATEAEDLQPLFAVRDEGWLGADVATSFRFPPQRPGRKXXXXXXXXXXXXXAGKYMWLFGDTLLGYANQDRRLAGAFFLHNSVAFLPAFNMSDASVSGPMAEDVYF-----------SWNVSRGGCPTSIF------IRGTPVDNECVHTQEYLWPISGIGVSYTEKKGRAKGEAGKEGKGEEQEEEVSKVVVLAVRWAYVQSSVMASVDLFDDNVFNFKILGTTVIVVDNPHADPSEWRYRQKDIPGTDGNLNWYSAMMHSSK---------GAELATGPDDVIYLFGV---NNTEAEGTPPQQWQYETMARLPARSLVDLSFKNMEVWAFTKTFP---RSPSQ----PFKQKTNIXXXXXXXXXXXXXXXPTSDRPN--------TTWASYPAFLRRHMNAAPLVFPVFSETSVQYSSALGVYYGVVVDWLASHIVLYLADDLIREWEPVVVYKIPPPFNDPAVYLTYAGKAHPELA-RENEIILTFMTNAPGDLEPLFETGAKDVYVPRFLRLTLE 1054 K NTSG SG L G +S +WRG +T +EA +LQPL R G+ GADVA S PP G K +WL GDT LG RR+ G +F+HNSVA +P +N S A+ V++ + + GCP S+F +RG +NEC EYLWP+SG+ V A S +++LA RWAY+ + V++ +V NF++LGTT++VVD+ H +P WRYR +D PGT ++NW+ A+ + + LA +++++L G ++ AE + + + R+P + L+D++ + MEVW K P R+ +Q K P++ N W + +++ A L+ PV++ S+QYSS L +Y V +DWL +L A+ + W+ +Y +PPPFND + + Y GKAHPELA ENEI+ T++ N PG + PLFE GA +YVPRF+R+ + Sbjct: 109 KTNTSGSPFDVPASRSGEQAPWLGQRAPFGPPQSRTWRGRRLTVSEAVELQPLLDARPLGYNGADVAASLPAPPM-AGDKGQPHT------------LWLLGDTFLGRMEGRRRIPG-YFVHNSVATMPVWN--HPSREADPAQVVFWHGLSPPAPFAATAEEEKDGCPASLFRTPGERVRGD--ENECHEGGEYLWPVSGLAVDL----------AAAPSNASASRSFASHLLLLATRWAYL-PWIEEDVNM-TRSVLNFQVLGTTLVVVDDAHLEPPRWRYRTRDWPGTGPDVNWFQAIALAGEEEXXXXXXXXXXLARSENELVFLMGTAPEDSAVAEKGGGKGSTRQILGRVPVKGLLDMTLEGMEVWGRGKAAPAKARAAAQVGATGAKAGDKAGLGRVFLPPAASGAIPSALTGNDGSRSDASEGWGTLSSYMDGSWVATSLLSPVYTGVSLQYSSFLRRWYSVAIDWLGKQALLQTAESITGPWDSTPIYDLPPPFNDSNL-MAYTGKAHPELADNENEIVFTYVANTPGVVYPLFEDGADILYVPRFVRIVFD 638
BLAST of NO12G01310 vs. NCBI_GenBank
Match: EWM29268.1 (glycolipid 2-alpha-mannosyltransferase [Nannochloropsis gaditana]) HSP 1 Score: 208.4 bits (529), Expect = 1.100e-49 Identity = 148/488 (30.33%), Postives = 219/488 (44.88%), Query Frame = 0 Query: 574 WRGVAITATEAEDLQPLFAVRDEGWLGADVATSFRFPPQRPGRKXXXXXXXXXXXXXAGKYMWLFGDTLLGYANQDRRLAGAFFLHNSVAFLPAFNMSDASVSGPM--AEDVYFSWNVSRGGCPTSIFIRGTPVDNECVHTQ-EYLWPISGIGVSYTEKKGRAKGEAGKEGKGEEQEEEVSKVVVLAVRWAYVQSSVMASVDLFDDNVFNFKILGTTVIVVDNPHADPSEWRYRQKDIPGTDGNLNWYSAMMHSSKGAELATGPDDVIYLFGVNNTEAEGTPPQQWQYETMARLPARSLVDLSFKNMEVWAFTKTFPRSPSQPFKQKTNIXXXXXXXXXXXXXXXPTSDRPNTTWASYPAFLRRHMNAAPLVFPVFSETSVQYSSALGVYYGVVVDWLASHIVLYLADDLIREWEPVVVYKIPPPFNDPAVYLTYAGKAHPELAREN------EIILTFMTNAPGDLEPLFETGAKDVYVPRFLRLTL 1053 WR I+ A +L L A R G+LG+DVATSFR P G YMWL GDT LG ++ +R + N+VAF P + +D +G + DV F W G PT+ P + E LWP+SG+ V Y + V K+V+ A R VQ + + L + NF++ GT++IV++NP A P+ WRY DI GT+G NW+SA+ + G E+A P+DV+YL G G + + R+ L+ F MEV R SD ++ A ++ P +ETS+QY+S LG + + VD +++ +VL+ A + W V++ IP P++D ++Y YAGK HPELARE E + +++ NAP D LF+ G +Y P+F+R+ L Sbjct: 905 WRDRDISVEPAPELSGLLAPRRFGYLGSDVATSFRLP----------------SVAGHGSYMWLLGDTYLGTSDGLKRQGMHTTISNAVAFFP--SGADLGAAGELLTPSDVTFFWGYDLDGSPTA------PFEAEAGQAAGTVLWPVSGVSVEY---------------------QGVVKIVLFAQR---VQKTHNLTDFLGVADGMNFEVEGTSLIVIENPAAAPNRWRYSVTDIAGTNGTHNWFSAVAVAG-GKEIADSPEDVLYLVGNVGARGLGVYDDEASKNVLGRIKVTDLLKRRFDRMEVLVEEAHESRE----------------------------SDGKELWMSTAEAEASVARRRKGIISPANAETSLQYNSELGAWVSLAVDSVSAQLVLWSARSVSGPWTSAVIHSIPAPYDDLSLYRCYAGKGHPELAREGLPGGDVEFVFSYVCNAPSDSGILFDEGQLTLYAPQFIRVRL 1315
BLAST of NO12G01310 vs. NCBI_GenBank
Match: KOO28529.1 (hypothetical protein Ctob_011265 [Chrysochromulina sp. CCMP291]) HSP 1 Score: 77.4 bits (189), Expect = 3.000e-10 Identity = 70/284 (24.65%), Postives = 118/284 (41.55%), Query Frame = 0 Query: 784 LGTTVIVVDN-PHADPSEWRYRQKDIPGTDGNLNWYSAMMHSSKGAELATGPDDVIYLFGVNNTEAEGTPPQQWQYETMARLPARSLVDLSFKNMEVWAFTKTFPRSPSQPFKQKTNIXXXXXXXXXXXXXXXPTSDRPNTTWASYPAFLRRHMNAAPLVFPVFSETSVQYSSALGVYYGVVVDWLASHIVLYLADDLIREWEPVVVYKIPPPFNDPAVY--LTYAGKAHPELAR-ENEIILTFMTNAPGDLEPLFETGAKDVYVPRFLRLTLEKPLLEAPAVE 1064 +GT V+++ N ADP W+Y + +D +HS LA D +Y+ G+ + +GT Q + +AR+ L+ ++ M+ W +P ++ R +AA L F+E ++ LG YY V + +I+++ A L W + Y +PP D A Y YA KAHPELA+ E+E+++++ N G+ + G +YVPRF+RL + + + A E Sbjct: 29 IGTDVVLIRNFSDADPQRWQYATSHVAASD--------QVHSWNNGVLAGEGDGFVYMIGMRENDLKGTN----QTQHLARIREDDLLAFNWDGMQFWG---------GEP-----------------------------------AGWVVRAWDAAKLYDGPFTEGTLA-KHPLGFYYVVCLQAGDPNIIIHSAASLTGPWGGAIAYTLPP---DLARYQQFAYAAKAHPELAQAEDELVISYNVNCVGEGFTCLD-GNLSIYVPRFVRLKVTRNVTAGRARE 251
BLAST of NO12G01310 vs. NCBI_GenBank
Match: WP_095415776.1 (DUF4185 domain-containing protein [Thermogutta terrifontis] >ASV75843.1 hypothetical protein THTE_3241 [Thermogutta terrifontis]) HSP 1 Score: 72.8 bits (177), Expect = 7.400e-9 Identity = 74/274 (27.01%), Postives = 114/274 (41.61%), Query Frame = 0 Query: 779 FNFKILGTTVIVVDNPHADPSEWRYRQKDIPGTDGNLNWYSAMMHSSKGAELATGPDDVIYLFGVNNTEAEGTPPQQWQYETMARLPARSLVDLSFKNMEVWAFTKTFPRSPSQPFKQKTNIXXXXXXXXXXXXXXXPTSDRPNTTWASYPAFLRRHMNAAPLVFPVFSETSVQYSSALGVYYGVVVD-WLASHIVLYLADDLIREW-EPVVVYKIPPPFNDPAVYLTYAGKAHPELARENEIILTFMTNAPGDLEPLFETGAKDVYVPRFLRL 1051 F F+ +G +++ VDNP P EW+ RQ+DIP + N SA++ S A L IYL+G + E TP ++ +AR+ +K ++ SD P + + +A L V SE SV Y L Y V L+ I++ A W + V++Y+IP D + YA KAHP LA E+E++++F+ N+ D L T D+Y P F+R+ Sbjct: 156 FGFRQIGESLLTVDNPDRSPPEWQIRQQDIPYFRSDKNG-SAVIGS---ATLVPPDGQYIYLYGF---DEEKTPLFPIKHAIVARV-------------------------------KKGHVEQSSEWEFYCGPAKLGESDLPEALLTNERFWTHDFSHATRLAREVASEYSVSYLPVLRAYVMVYTRLGLSQDIMMRSAPTPAGPWGDAVLLYRIPDLPEDTKAFF-YAAKAHPALAGEDELVISFVANS-FDFGRLVRT--PDIYRPWFIRV 387
BLAST of NO12G01310 vs. NCBI_GenBank
Match: WP_108207359.1 (DUF4185 domain-containing protein [Pedobacter sp. YR016] >PTX27564.1 uncharacterized protein DUF4185 [Pedobacter sp. YR016]) HSP 1 Score: 69.3 bits (168), Expect = 8.200e-8 Identity = 65/273 (23.81%), Postives = 101/273 (37.00%), Query Frame = 0 Query: 577 VAITATEAEDLQPLFAVRDEGWLGADVATSFRFPPQRPGRKXXXXXXXXXXXXXAGKYMWLFGDTLLGYANQDRRLAGAFFLHNSVAFLPAFNMSDASVSGPMAEDVYFSWNVSRGGCPTSIFIRGTPVDNECVHTQEYLWPISGIGVSYTEKKGRAKGEAGKEGKGEEQEEEVSKVVVLAVRWAYVQSSVMASVDLFDDNVFNFKILGTTVIVVDNPHADPSEWRYRQKDIP------GTDGNLNWYSAMMHSSKGAELATGPDDVIYLFGV 844 + TATEA + LF VR+ GW G D S G+ A K +++F D+++G ++ GA +HNSVA L P+ E++ FSW G P ++FI TP+ +Y W G G +E+ + + + R V D F F +G T+I + P + Y QKD P + + + A + + PD IY++GV Sbjct: 34 IKFTATEATEWSNLF-VRENGWFGGDGIYSIPLNGVESGK------------PEAKKTLFIFSDSMIGKIKDEKMEPGAKMIHNSVAILKG--------GEPVKENLSFSWENDSKGNPETVFIPKTPLTG----PTDYYW----------------------LGDGFVNQEQNNAIYIFGYR-----------VKQVGDGAFGFSEVGNTLIKIAEKEQPPFK-TYEQKDTPFYISKSEAEKEMGSFGAGIFVNTAKAGTPNPDGYIYVYGV 247 The following BLAST results are available for this feature:
BLAST of NO12G01310 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 6
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO12G01310 ID=NO12G01310|Name=NO12G01310|organism=Nannochloropsis oceanica|type=gene|length=3466bpback to top protein sequence of NO12G01310.1 >NO12G01310.1-protein ID=NO12G01310.1-protein|Name=NO12G01310.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1080bpback to top Synonyms
Publications
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