NO12G01310, NO12G01310 (gene) Nannochloropsis oceanica

Overview
NameNO12G01310
Unique NameNO12G01310
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3466
Alignment locationchr12:411918..415383 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr12genomechr12:411918..415383 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR029044Nucleotide-diphossugar_trans
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Homology
BLAST of NO12G01310 vs. NCBI_GenBank
Match: EWM25898.1 (hypothetical protein Naga_100048g28 [Nannochloropsis gaditana])

HSP 1 Score: 1112.8 bits (2877), Expect = 0.000e+0
Identity = 601/1075 (55.91%), Postives = 729/1075 (67.81%), Query Frame = 0
Query:   34 AAHVS-TDVNAQDNPATQA--KRRSLSLLVGWALLAGAVILGLVLSIWRNETKHQ-LVKQVLPPSRIMLGSPPPQDVPILGTHCCTTEFNLETFAFAGESALTRSFD---GKNPKAPPSLESQLFRQAVVNAAGNDSTGSRSKQRLSGGCYLIMTQHRGEGGLEGVLGRLDRHFTRFHRYPVVVFLAAWNLTQESQDRLRAIAPSTTIDFRPVPRLQEQYQAREAVRRDHAGEAKSGKSSAVTAAAAAFERSLWEFRVSEAPRLLSKQYEWVLHLSEDTLLSENVLIDPFEALKATSRKLGYMTAHRPVDEESLWAFGRSFVLQHQFDKNGHTKEDSAMNLTWNVAKAMDGRWIAFHQTVFTSELYQALVVGLASSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDSPLSSPAEH-----GQKQQQHTRAPTAFLDARDIFFNAFF-----XXXXXXXXXXXXXXXXXXAFQRQLDDTIAASAPAPTGMFTINLPDPSAVLTLGSLITLAPDDFMQYRGLNMRRPPKKNTSGSGPAVEGLSLEEAAGVTRSSWRGVAITATEAEDLQPLFAVRDEGWLGADVATSFRFPPQRP---------------------GRKXXXXXXXXXXXXXAGKYMWLFGDTLLGYANQDRRLAGAFFLHNSVAFLPAFNMSDASVSGPMAEDVYFSWNVSRGGCPTSIFIRGTPVDNECVHTQEYLWPISGIGVSY----TEKKGRAKGEAGKEGKGEE------QEEEVSKVVVLAVRWAYVQSSVMASVDLFDDNVFNFKILGTTVIVVDNPHADPSEWRYRQKDIPGTDGNLNWYSAMMHSSKGAELATGPDDVIYLFGVNNTEAEGTPPQQWQYETMARLPARSLVDLSFKNMEVWAFTKTFPRSPSQPFKQKTNIXXXXXXXXXXXXXXXPTSDR-PNTTWASYPAFLRRHMNAAPLVFPVFSETSVQYSSALGVYYGVVVDWLASHIVLYLADDLIREWEPVVVYKIPPPFNDPAVYLTYAGKAHPELARENEIILTFMTNAPGDLEPLFETGAKDVYVPRFLRLTLEKPLLEA 1060
            AAH S   + +Q + AT    K+RSL +L  W   AG VILGLVL+I  NE++ Q L+++   PSR+MLG PP QDVPILGTHCCTTE+ LE    A ++  + ++    GK+ +APPSLE++LFR+AV +A   DSTG+   Q LSG  YL++T  R E  L  +L RL  HF R HRYPVVV+LA+ NLTQ+S+D L+A  PS+ +DFRPVP L EQ+QA +A            K + +   AAA+ER+LW+F+VSEAPRLL++++EW+LHLSEDTLLS++VL+DPF AL+ T R+LGYM AHR VDEE LWAFGR F  QH   + G  K ++A++LTWNV KA+D RWIA+H++VFTSELY+ +VV LA+S                                   SP ++P +       Q ++     P+A  DA D+  +                          A  R   +  AA +P+   M ++ LPDP+AVLTLGSL+TL  D+FMQYRGLN+ RPPK+ T G    ++GLS EEAAGVTRSSWRG+ I ATEAEDLQPLF+VR+ GWLGADVATSFRFPP+ P                     GR               GKYMWLFGDTLLGYAN+DRRL+GAFFLHNSVAFLP  N+SD        EDV F+WNVS+GGCP SIF+RG P D+ECVHTQ+YLWPISGIGVSY     EKKG   G+ G+   G E      + + VSKV+VLAVRWAYV+S   ASVDLFDDN FNF ILGTTV+VVDNPHA P++W YRQ+D+PGTD NLNWYSAMMH  K AELATGP+D+IYLFGVNNTEA GTPPQQWQYET++RLP RSLVDLSF++MEVWA TK  P   +Q                        T  R  NTTWA YP FL RH+ AAPLVFPVFSETSV+YS +LG YYGVVVDWL+S++VLYLA+DL   WEPVVVYKIPPPFNDPAVY+TYAGKAHPEL+RE+E+ILTFMTNAPGDLEPLFETGAKDVYVPRFLRL LE+P  +A
Sbjct:   30 AAHASLRPIQSQFSGATPVWRKQRSLLILGAWMAFAGLVILGLVLTISHNESRRQRLLERGSLPSRVMLGPPPSQDVPILGTHCCTTEYGLEASTMAAQATNSAAWSMGHGKHSRAPPSLEARLFREAVADA---DSTGAGGNQGLSGVVYLVVTPRRTEDALGQLLRRLHEHFLRLHRYPVVVYLASENLTQDSRDHLQATVPSSIVDFRPVPDLLEQHQALQA----QGSSGTERKPAILRPEAAAYERALWDFQVSEAPRLLAQEFEWILHLSEDTLLSQDVLLDPFHALRMTDRRLGYMAAHRAVDEEGLWAFGRKFAEQHVLARKG--KGEAALHLTWNVPKAIDARWIAYHKSVFTSELYRLMVVALAASPLTDTLPAST------------------------PSPTNAPKDASLSRLSQGRRPPLSLPSALFDAGDVLLDPSVAAIAAAVSSSSPTSPSSRIQSEVALDRYRKEGEAAPSPS---MVSLRLPDPAAVLTLGSLVTLTQDEFMQYRGLNLERPPKR-TDG----LQGLSPEEAAGVTRSSWRGIEIIATEAEDLQPLFSVRNAGWLGADVATSFRFPPRHPTGLRTSGVATSTSDATQGPGDGRTEGPKKEGDVGEAEHGKYMWLFGDTLLGYANEDRRLSGAFFLHNSVAFLPVINVSDPRAKPLGPEDVVFAWNVSKGGCPVSIFVRGPPQDDECVHTQDYLWPISGIGVSYLEPRAEKKGNVNGKRGRGDSGSEFDSSTAEGDVVSKVIVLAVRWAYVKSHT-ASVDLFDDNAFNFNILGTTVLVVDNPHAHPTQWEYRQRDLPGTDANLNWYSAMMHGDKDAELATGPEDMIYLFGVNNTEAVGTPPQQWQYETLSRLPVRSLVDLSFRDMEVWALTKGSPDEKAQ--------------------ATTDTDTRLTNTTWAPYPLFLHRHLKAAPLVFPVFSETSVRYSHSLGAYYGVVVDWLSSNVVLYLAEDLTEAWEPVVVYKIPPPFNDPAVYMTYAGKAHPELSREDELILTFMTNAPGDLEPLFETGAKDVYVPRFLRLKLERPAPKA 1042          
BLAST of NO12G01310 vs. NCBI_GenBank
Match: EWM21594.1 (hypothetical protein Naga_100012g47 [Nannochloropsis gaditana])

HSP 1 Score: 255.4 bits (651), Expect = 8.000e-64
Identity = 179/561 (31.91%), Postives = 268/561 (47.77%), Query Frame = 0
Query:  548 KKNTSG---------SGPAVEGLSLEEAAGVTRS-SWRGVAITATEAEDLQPLFAVRDEGWLGADVATSFRFPPQRPGRKXXXXXXXXXXXXXAGKYMWLFGDTLLGYANQDRRLAGAFFLHNSVAFLPAFNMSDASVSGPMAEDVYF-----------SWNVSRGGCPTSIF------IRGTPVDNECVHTQEYLWPISGIGVSYTEKKGRAKGEAGKEGKGEEQEEEVSKVVVLAVRWAYVQSSVMASVDLFDDNVFNFKILGTTVIVVDNPHADPSEWRYRQKDIPGTDGNLNWYSAMMHSSK---------GAELATGPDDVIYLFGV---NNTEAEGTPPQQWQYETMARLPARSLVDLSFKNMEVWAFTKTFP---RSPSQ----PFKQKTNIXXXXXXXXXXXXXXXPTSDRPN--------TTWASYPAFLRRHMNAAPLVFPVFSETSVQYSSALGVYYGVVVDWLASHIVLYLADDLIREWEPVVVYKIPPPFNDPAVYLTYAGKAHPELA-RENEIILTFMTNAPGDLEPLFETGAKDVYVPRFLRLTLE 1054
            K NTSG         SG     L      G  +S +WRG  +T +EA +LQPL   R  G+ GADVA S   PP   G K                 +WL GDT LG     RR+ G +F+HNSVA +P +N    S     A+ V++           +    + GCP S+F      +RG   +NEC    EYLWP+SG+ V            A             S +++LA RWAY+   +   V++   +V NF++LGTT++VVD+ H +P  WRYR +D PGT  ++NW+ A+  + +            LA   +++++L G    ++  AE    +    + + R+P + L+D++ + MEVW   K  P   R+ +Q      K                    P++   N          W +  +++     A  L+ PV++  S+QYSS L  +Y V +DWL    +L  A+ +   W+   +Y +PPPFND  + + Y GKAHPELA  ENEI+ T++ N PG + PLFE GA  +YVPRF+R+  +
Sbjct:  109 KTNTSGSPFDVPASRSGEQAPWLGQRAPFGPPQSRTWRGRRLTVSEAVELQPLLDARPLGYNGADVAASLPAPPM-AGDKGQPHT------------LWLLGDTFLGRMEGRRRIPG-YFVHNSVATMPVWN--HPSREADPAQVVFWHGLSPPAPFAATAEEEKDGCPASLFRTPGERVRGD--ENECHEGGEYLWPVSGLAVDL----------AAAPSNASASRSFASHLLLLATRWAYL-PWIEEDVNM-TRSVLNFQVLGTTLVVVDDAHLEPPRWRYRTRDWPGTGPDVNWFQAIALAGEEEXXXXXXXXXXLARSENELVFLMGTAPEDSAVAEKGGGKGSTRQILGRVPVKGLLDMTLEGMEVWGRGKAAPAKARAAAQVGATGAKAGDKAGLGRVFLPPAASGAIPSALTGNDGSRSDASEGWGTLSSYMDGSWVATSLLSPVYTGVSLQYSSFLRRWYSVAIDWLGKQALLQTAESITGPWDSTPIYDLPPPFNDSNL-MAYTGKAHPELADNENEIVFTYVANTPGVVYPLFEDGADILYVPRFVRIVFD 638          
BLAST of NO12G01310 vs. NCBI_GenBank
Match: EWM29268.1 (glycolipid 2-alpha-mannosyltransferase [Nannochloropsis gaditana])

HSP 1 Score: 208.4 bits (529), Expect = 1.100e-49
Identity = 148/488 (30.33%), Postives = 219/488 (44.88%), Query Frame = 0
Query:  574 WRGVAITATEAEDLQPLFAVRDEGWLGADVATSFRFPPQRPGRKXXXXXXXXXXXXXAGKYMWLFGDTLLGYANQDRRLAGAFFLHNSVAFLPAFNMSDASVSGPM--AEDVYFSWNVSRGGCPTSIFIRGTPVDNECVHTQ-EYLWPISGIGVSYTEKKGRAKGEAGKEGKGEEQEEEVSKVVVLAVRWAYVQSSVMASVDLFDDNVFNFKILGTTVIVVDNPHADPSEWRYRQKDIPGTDGNLNWYSAMMHSSKGAELATGPDDVIYLFGVNNTEAEGTPPQQWQYETMARLPARSLVDLSFKNMEVWAFTKTFPRSPSQPFKQKTNIXXXXXXXXXXXXXXXPTSDRPNTTWASYPAFLRRHMNAAPLVFPVFSETSVQYSSALGVYYGVVVDWLASHIVLYLADDLIREWEPVVVYKIPPPFNDPAVYLTYAGKAHPELAREN------EIILTFMTNAPGDLEPLFETGAKDVYVPRFLRLTL 1053
            WR   I+   A +L  L A R  G+LG+DVATSFR P                     G YMWL GDT LG ++  +R      + N+VAF P  + +D   +G +    DV F W     G PT+      P + E        LWP+SG+ V Y                     + V K+V+ A R   VQ +   +  L   +  NF++ GT++IV++NP A P+ WRY   DI GT+G  NW+SA+  +  G E+A  P+DV+YL G       G    +     + R+    L+   F  MEV        R                             SD      ++  A          ++ P  +ETS+QY+S LG +  + VD +++ +VL+ A  +   W   V++ IP P++D ++Y  YAGK HPELARE       E + +++ NAP D   LF+ G   +Y P+F+R+ L
Sbjct:  905 WRDRDISVEPAPELSGLLAPRRFGYLGSDVATSFRLP----------------SVAGHGSYMWLLGDTYLGTSDGLKRQGMHTTISNAVAFFP--SGADLGAAGELLTPSDVTFFWGYDLDGSPTA------PFEAEAGQAAGTVLWPVSGVSVEY---------------------QGVVKIVLFAQR---VQKTHNLTDFLGVADGMNFEVEGTSLIVIENPAAAPNRWRYSVTDIAGTNGTHNWFSAVAVAG-GKEIADSPEDVLYLVGNVGARGLGVYDDEASKNVLGRIKVTDLLKRRFDRMEVLVEEAHESRE----------------------------SDGKELWMSTAEAEASVARRRKGIISPANAETSLQYNSELGAWVSLAVDSVSAQLVLWSARSVSGPWTSAVIHSIPAPYDDLSLYRCYAGKGHPELAREGLPGGDVEFVFSYVCNAPSDSGILFDEGQLTLYAPQFIRVRL 1315          
BLAST of NO12G01310 vs. NCBI_GenBank
Match: KOO28529.1 (hypothetical protein Ctob_011265 [Chrysochromulina sp. CCMP291])

HSP 1 Score: 77.4 bits (189), Expect = 3.000e-10
Identity = 70/284 (24.65%), Postives = 118/284 (41.55%), Query Frame = 0
Query:  784 LGTTVIVVDN-PHADPSEWRYRQKDIPGTDGNLNWYSAMMHSSKGAELATGPDDVIYLFGVNNTEAEGTPPQQWQYETMARLPARSLVDLSFKNMEVWAFTKTFPRSPSQPFKQKTNIXXXXXXXXXXXXXXXPTSDRPNTTWASYPAFLRRHMNAAPLVFPVFSETSVQYSSALGVYYGVVVDWLASHIVLYLADDLIREWEPVVVYKIPPPFNDPAVY--LTYAGKAHPELAR-ENEIILTFMTNAPGDLEPLFETGAKDVYVPRFLRLTLEKPLLEAPAVE 1064
            +GT V+++ N   ADP  W+Y    +  +D         +HS     LA   D  +Y+ G+   + +GT     Q + +AR+    L+  ++  M+ W           +P                                     ++ R  +AA L    F+E ++     LG YY V +     +I+++ A  L   W   + Y +PP   D A Y    YA KAHPELA+ E+E+++++  N  G+     + G   +YVPRF+RL + + +    A E
Sbjct:   29 IGTDVVLIRNFSDADPQRWQYATSHVAASD--------QVHSWNNGVLAGEGDGFVYMIGMRENDLKGTN----QTQHLARIREDDLLAFNWDGMQFWG---------GEP-----------------------------------AGWVVRAWDAAKLYDGPFTEGTLA-KHPLGFYYVVCLQAGDPNIIIHSAASLTGPWGGAIAYTLPP---DLARYQQFAYAAKAHPELAQAEDELVISYNVNCVGEGFTCLD-GNLSIYVPRFVRLKVTRNVTAGRARE 251          
BLAST of NO12G01310 vs. NCBI_GenBank
Match: WP_095415776.1 (DUF4185 domain-containing protein [Thermogutta terrifontis] >ASV75843.1 hypothetical protein THTE_3241 [Thermogutta terrifontis])

HSP 1 Score: 72.8 bits (177), Expect = 7.400e-9
Identity = 74/274 (27.01%), Postives = 114/274 (41.61%), Query Frame = 0
Query:  779 FNFKILGTTVIVVDNPHADPSEWRYRQKDIPGTDGNLNWYSAMMHSSKGAELATGPDDVIYLFGVNNTEAEGTPPQQWQYETMARLPARSLVDLSFKNMEVWAFTKTFPRSPSQPFKQKTNIXXXXXXXXXXXXXXXPTSDRPNTTWASYPAFLRRHMNAAPLVFPVFSETSVQYSSALGVYYGVVVD-WLASHIVLYLADDLIREW-EPVVVYKIPPPFNDPAVYLTYAGKAHPELARENEIILTFMTNAPGDLEPLFETGAKDVYVPRFLRL 1051
            F F+ +G +++ VDNP   P EW+ RQ+DIP    + N  SA++ S   A L       IYL+G    + E TP    ++  +AR+                               +K ++                 SD P     +   +     +A  L   V SE SV Y   L  Y  V     L+  I++  A      W + V++Y+IP    D   +  YA KAHP LA E+E++++F+ N+  D   L  T   D+Y P F+R+
Sbjct:  156 FGFRQIGESLLTVDNPDRSPPEWQIRQQDIPYFRSDKNG-SAVIGS---ATLVPPDGQYIYLYGF---DEEKTPLFPIKHAIVARV-------------------------------KKGHVEQSSEWEFYCGPAKLGESDLPEALLTNERFWTHDFSHATRLAREVASEYSVSYLPVLRAYVMVYTRLGLSQDIMMRSAPTPAGPWGDAVLLYRIPDLPEDTKAFF-YAAKAHPALAGEDELVISFVANS-FDFGRLVRT--PDIYRPWFIRV 387          
BLAST of NO12G01310 vs. NCBI_GenBank
Match: WP_108207359.1 (DUF4185 domain-containing protein [Pedobacter sp. YR016] >PTX27564.1 uncharacterized protein DUF4185 [Pedobacter sp. YR016])

HSP 1 Score: 69.3 bits (168), Expect = 8.200e-8
Identity = 65/273 (23.81%), Postives = 101/273 (37.00%), Query Frame = 0
Query:  577 VAITATEAEDLQPLFAVRDEGWLGADVATSFRFPPQRPGRKXXXXXXXXXXXXXAGKYMWLFGDTLLGYANQDRRLAGAFFLHNSVAFLPAFNMSDASVSGPMAEDVYFSWNVSRGGCPTSIFIRGTPVDNECVHTQEYLWPISGIGVSYTEKKGRAKGEAGKEGKGEEQEEEVSKVVVLAVRWAYVQSSVMASVDLFDDNVFNFKILGTTVIVVDNPHADPSEWRYRQKDIP------GTDGNLNWYSAMMHSSKGAELATGPDDVIYLFGV 844
            +  TATEA +   LF VR+ GW G D   S        G+              A K +++F D+++G    ++   GA  +HNSVA L            P+ E++ FSW     G P ++FI  TP+        +Y W                       G G   +E+ + + +   R           V    D  F F  +G T+I +      P +  Y QKD P        +  +  + A +  +        PD  IY++GV
Sbjct:   34 IKFTATEATEWSNLF-VRENGWFGGDGIYSIPLNGVESGK------------PEAKKTLFIFSDSMIGKIKDEKMEPGAKMIHNSVAILKG--------GEPVKENLSFSWENDSKGNPETVFIPKTPLTG----PTDYYW----------------------LGDGFVNQEQNNAIYIFGYR-----------VKQVGDGAFGFSEVGNTLIKIAEKEQPPFK-TYEQKDTPFYISKSEAEKEMGSFGAGIFVNTAKAGTPNPDGYIYVYGV 247          
The following BLAST results are available for this feature:
BLAST of NO12G01310 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 6
Match NameE-valueIdentityDescription
EWM25898.10.000e+055.91hypothetical protein Naga_100048g28 [Nannochlorops... [more]
EWM21594.18.000e-6431.91hypothetical protein Naga_100012g47 [Nannochlorops... [more]
EWM29268.11.100e-4930.33glycolipid 2-alpha-mannosyltransferase [Nannochlor... [more]
KOO28529.13.000e-1024.65hypothetical protein Ctob_011265 [Chrysochromulina... [more]
WP_095415776.17.400e-927.01DUF4185 domain-containing protein [Thermogutta ter... [more]
WP_108207359.18.200e-823.81DUF4185 domain-containing protein [Pedobacter sp. ... [more]
back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL124nonsL124Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR014ncniR014Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR006ngnoR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010050NSK010050Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO12G01310.1NO12G01310.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|671390gene_5290Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100048g28gene4626Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO12G01310.1NO12G01310.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO12G01310 ID=NO12G01310|Name=NO12G01310|organism=Nannochloropsis oceanica|type=gene|length=3466bp
ACAGGCACTATGCCCTCGAATACCACCCTCCGGAGGGGAGGAGGGAGTCC
ACGGACGGCGTCAAACGAGGTGGAGATAACAATGCCGCATAGCCTCGACC
CTACTCCTGCTGCCCATGTCTCGACCGACGTCAACGCACAAGACAATCCC
GCCACCCAGGCGAAGCGCCGGTCCCTGTCCTTGCTGGTGGGATGGGCTCT
GCTTGCGGGTGCCGTAATTTTGGGGCTGGTCCTGTCTATCTGGCGAAACG
AGACAAAGCATCAGCTCGTGAAGCAAGTCCTTCCTCCATCCCGCATCATG
TTGGGCTCGCCACCCCCGCAAGACGTCCCCATTTTGGGAACGCATTGCTG
TACCACTGAATTTAACCTTGAGACATTCGCGTTCGCGGGAGAGAGCGCGC
TGACGAGGTCCTTTGATGGGAAGAACCCAAAGGCCCCTCCCAGTCTTGAA
TCGCAGCTATTCCGACAGGCCGTCGTGAACGCCGCCGGGAACGATTCGAC
AGGGAGCAGGAGCAAGCAGCGCCTTTCGGGGGGTTGTTATCTCATTATGA
CCCAGCACCGTGGCGAAGGGGGTTTGGAGGGGGTGCTGGGCCGTTTGGAC
AGGCATTTTACGCGTTTCCATAGGTACCCTGTGGTCGTCTTTCTAGCAGC
ATGGAACTTGACTCAAGAATCCCAAGACCGGCTGCGAGCCATTGCTCCTT
CTACAACCATCGATTTCCGTCCTGTGCCTAGGCTGCAAGAGCAGTATCAA
GCGAGGGAAGCGGTAAGACGTGACCATGCCGGAGAGGCGAAGAGTGGGAA
GTCATCAGCTGTTACTGCGGCAGCCGCGGCGTTCGAGAGGTCCTTGTGGG
AATTTCGGGTGAGCGAGGCCCCTCGCTTGTTGTCGAAACAGTATGAGTGG
GTATTACATTTATCCGAGGACACTTTATTGAGCGAAAATGTTCTCATTGA
CCCCTTCGAGGCTTTGAAAGCTACCAGTCGCAAGCTAGGGTACATGACAG
CCCATCGTCCAGTGGACGAAGAGTCCCTCTGGGCGTTCGGGCGCTCCTTC
GTCCTCCAACACCAATTCGACAAAAATGGGCACACTAAAGAAGACTCCGC
CATGAATCTTACTTGGAACGTTGCCAAAGCGATGGATGGGCGATGGATTG
CATTTCATCAAACAGTCTTCACCTCTGAGCTTTACCAGGCCCTGGTCGTC
GGCCTTGCCTCTTCCTCCCTTACCCAACCTCAACCGGCCGCAACAGCGAC
AGAAGAAGCAGCAGCAGCAGCAGCAGCATCGCCAAGTGTAGCAGCGGCAG
CAGCTGTGTCCAACGGTGATTCTCCACTTTCTTCTCCTGCCGAGCATGGG
CAAAAGCAACAGCAGCACACACGAGCTCCAACCGCGTTTTTGGACGCCCG
CGACATTTTTTTTAATGCTTTCTTCTCCTACACCTCTTCATCCTCCTCGT
CCTCCTTCTCGTCTTTGTCACCTCTCACCGCATTCCAACGCCAACTCGAC
GACACCATAGCAGCATCAGCACCAGCACCAACTGGTATGTTCACAATCAA
CCTCCCCGACCCCTCCGCGGTCCTGACCTTGGGAAGCCTCATCACTCTTG
CGCCGGACGATTTCATGCAATACCGCGGCCTGAATATGCGACGGCCCCCC
AAGAAAAACACAAGCGGCAGCGGGCCAGCGGTTGAGGGGCTTTCATTGGA
AGAAGCTGCTGGTGTGACCAGGAGTAGTTGGAGGGGTGTGGCGATCACAG
CGACAGAAGCAGAAGACCTACAGCCGCTGTTTGCTGTGCGAGACGAAGGG
TGGTTGGGCGCTGACGTGGCAACGTCATTTCGTTTTCCGCCTCAAAGGCC
TGGAAGGAAGGAGGGAGGGAAGGAGAAGGAGGAGGAAGAAAAAGAGGAAG
CGGGGAAGTATATGTGGCTATTCGGGGACACTTTATTGGGGTACGCAAAT
CAGGATCGGAGGCTGGCTGGGGCATTTTTCTTGCATAACAGTGTGGCGTT
TCTCCCTGCATTCAATATGAGTGATGCCTCGGTGAGCGGACCCATGGCTG
AAGATGTATATTTTTCGTGGAATGTTTCAAGAGGGGGTTGTCCGACATCA
ATATTCATTAGAGGAACACCGGTTGATAATGAGTGCGTGCACACACAGGA
GTATTTGTGGCCCATTTCGGGGATTGGGGTTTCTTATACGGAGAAGAAGG
GGAGGGCCAAGGGGGAGGCAGGCAAAGAGGGCAAGGGGGAGGAACAGGAG
GAGGAAGTAAGTAAGGTGGTTGTGTTGGCAGTGCGATGGGCGTACGTGCA
AAGCAGCGTGATGGCGTCGGTAGATTTGTTTGATGACAATGTATTTAATT
TCAAAATCCTCGGAACTACTGTCATCGTTGTCGATAATCCCCATGCCGAC
CCCTCCGAGTGGAGGTACCGTCAGAAGGACATTCCCGGAACAGATGGTAA
TTTGAATTGGTATTCCGCGATGATGCACAGCAGCAAGGGGGCAGAGCTCG
CTACGGGGCCTGACGACGTTATTTATCTGTTCGGAGTCAACAATACCGAG
GCCGAGGGCACCCCACCCCAGCAGTGGCAATACGAGACCATGGCCCGCTT
ACCGGCAAGGAGCTTGGTCGATCTCTCCTTCAAGAATATGGAGGTCTGGG
CATTTACCAAGACCTTCCCCCGCTCTCCGTCGCAACCGTTCAAGCAGAAG
ACAAACATCAGTAGCAGCAGCAGCAGCAGCAGCAGCAGTAGCAGCAGCAG
CATTCCCACGAGCGATCGACCAAACACCACCTGGGCTTCCTACCCGGCTT
TCCTCCGCAGGCACATGAATGCCGCCCCCCTCGTTTTCCCTGTTTTTTCC
GAAACCAGCGTCCAATACAGCTCGGCTCTTGGCGTTTATTATGGGGTGGT
TGTCGATTGGCTCGCCTCCCACATTGTCCTATACCTTGCAGATGACCTCA
TCCGAGAATGGGAACCCGTGGTGGTTTATAAAATCCCTCCGCCCTTTAAT
GATCCAGCTGTTTATTTGACGTACGCCGGAAAGGCCCACCCTGAGCTGGC
AAGGGAGAATGAGATCATTTTGACATTCATGACTAATGCACCTGGTGACT
TGGAGCCGCTTTTCGAGACCGGTGCGAAGGACGTCTATGTCCCTCGCTTT
CTACGATTGACCCTGGAGAAACCGTTGCTGGAGGCACCAGCAGTTGAAGC
AGCAACAGCAACGACGGTGGGAGTCCTGGCGAGAGGCGGAGGGGAGTAAT
TCTCTGCAGGAGCTGTTCTTTGAGTAGAGTGCGTGTGACGTGAGAAGGTT
ACATTTTGTAGATAGCTTTGGGGGGGAAAATTGTTGAAAAAAGCTGAGTA
AAGAGTCAGGAAGACTTGTTGGTAGACATACAGACGTACAGACAAATCAA
CTCATGAGCCGGGCACTCGTCCAGTGTAGATAGTAGATAGCTTCACGAGT
GAAAAGCAAGCAATCC
back to top

protein sequence of NO12G01310.1

>NO12G01310.1-protein ID=NO12G01310.1-protein|Name=NO12G01310.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1080bp
MPSNTTLRRGGGSPRTASNEVEITMPHSLDPTPAAHVSTDVNAQDNPATQ
AKRRSLSLLVGWALLAGAVILGLVLSIWRNETKHQLVKQVLPPSRIMLGS
PPPQDVPILGTHCCTTEFNLETFAFAGESALTRSFDGKNPKAPPSLESQL
FRQAVVNAAGNDSTGSRSKQRLSGGCYLIMTQHRGEGGLEGVLGRLDRHF
TRFHRYPVVVFLAAWNLTQESQDRLRAIAPSTTIDFRPVPRLQEQYQARE
AVRRDHAGEAKSGKSSAVTAAAAAFERSLWEFRVSEAPRLLSKQYEWVLH
LSEDTLLSENVLIDPFEALKATSRKLGYMTAHRPVDEESLWAFGRSFVLQ
HQFDKNGHTKEDSAMNLTWNVAKAMDGRWIAFHQTVFTSELYQALVVGLA
SSSLTQPQPAATATEEAAAAAAASPSVAAAAAVSNGDSPLSSPAEHGQKQ
QQHTRAPTAFLDARDIFFNAFFSYTSSSSSSSFSSLSPLTAFQRQLDDTI
AASAPAPTGMFTINLPDPSAVLTLGSLITLAPDDFMQYRGLNMRRPPKKN
TSGSGPAVEGLSLEEAAGVTRSSWRGVAITATEAEDLQPLFAVRDEGWLG
ADVATSFRFPPQRPGRKEGGKEKEEEEKEEAGKYMWLFGDTLLGYANQDR
RLAGAFFLHNSVAFLPAFNMSDASVSGPMAEDVYFSWNVSRGGCPTSIFI
RGTPVDNECVHTQEYLWPISGIGVSYTEKKGRAKGEAGKEGKGEEQEEEV
SKVVVLAVRWAYVQSSVMASVDLFDDNVFNFKILGTTVIVVDNPHADPSE
WRYRQKDIPGTDGNLNWYSAMMHSSKGAELATGPDDVIYLFGVNNTEAEG
TPPQQWQYETMARLPARSLVDLSFKNMEVWAFTKTFPRSPSQPFKQKTNI
SSSSSSSSSSSSSSIPTSDRPNTTWASYPAFLRRHMNAAPLVFPVFSETS
VQYSSALGVYYGVVVDWLASHIVLYLADDLIREWEPVVVYKIPPPFNDPA
VYLTYAGKAHPELARENEIILTFMTNAPGDLEPLFETGAKDVYVPRFLRL
TLEKPLLEAPAVEAATATTVGVLARGGGE*
back to top
Synonyms
Publications