NO12G01150, NO12G01150 (gene) Nannochloropsis oceanica

Overview
NameNO12G01150
Unique NameNO12G01150
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2398
Alignment locationchr12:363624..366021 -

Link to JBrowse

Properties
Property NameValue
DescriptionProtein CreA
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr12genomechr12:363624..366021 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR032710NTF2-like_dom_sf
IPR018790DUF2358
IPR010292Uncharacterised_CreA
Homology
BLAST of NO12G01150 vs. NCBI_GenBank
Match: EWM25897.1 (Uncharacterized protein family CreA [Nannochloropsis gaditana])

HSP 1 Score: 497.7 bits (1280), Expect = 3.700e-137
Identity = 253/354 (71.47%), Postives = 293/354 (82.77%), Query Frame = 0
Query:   85 QEASLSTPEKVVTRLSPTALKQKIEADYKAAYFLTGAISPEAYDEDCVFMDPTLSFTGLATWSRNINNLKIFFRDPRLDLQGIKLDTTTQTVKTQWRLTCELALPWRPFIDVEGSTLHRYDPLKGGKVVEHIESWAISGLAAVLQLFKPGNSRPSPASLPSPPPSKMKGNFRLLANTIFPLSLSLLPSFSSSFPSSP-----SSFVVHAAED-RRQVADIPASGLVFKDTINVEAFQDPKVKGVTLYVSDFKRPITERLAKDFFSDPSQASVACVRTGLVVKGDIDTSKQGEEVFSEARSLLFKTIRVRRVYDKDAQALIYVSYSTRFNNKDDDNKSRFKSSICAIPLDQEATQ 433
            Q+A       V  RLSP  L+QKIE DYKAAYFLTG IS +AYDE+C+F DPTLSF+GL TWSRNINNLKIFFRDPRL+L+ I+LDTT++TV TQWRLTCE+ALPWRPFIDVEG+T+HRYDP KGG+VVEH E WA+SG  A+LQLFKPG  RP  AS  S   ++ +   RLLA+T+ P+SLSLL   +SS PSSP     S+FV  AA D RRQVADIPASGL+FKD+INVEAFQDPKV+GVTLY+SDF+RP+TERLAKDFFSDPSQASVACVRTG V   +ID SKQGEEVFSEARSLLFKTIRVRRVYDK+++ALIY+SYSTRF+  DDDNKSRFKSS+CAIP++    Q
Sbjct:   10 QDAKPLPSNTVARRLSPAVLRQKIEKDYKAAYFLTGDISTDAYDENCLFTDPTLSFSGLDTWSRNINNLKIFFRDPRLELREIRLDTTSRTVNTQWRLTCEIALPWRPFIDVEGATVHRYDPSKGGRVVEHTEYWAVSGFQALLQLFKPGKGRPMDASSAS-STAQFQAGVRLLASTVLPISLSLLS--ASSLPSSPASTLRSAFVARAASDERRQVADIPASGLIFKDSINVEAFQDPKVQGVTLYISDFRRPLTERLAKDFFSDPSQASVACVRTGPVTMKNIDLSKQGEEVFSEARSLLFKTIRVRRVYDKESKALIYISYSTRFSKSDDDNKSRFKSSLCAIPVEDVDAQ 360          
BLAST of NO12G01150 vs. NCBI_GenBank
Match: CEM11152.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 297.7 bits (761), Expect = 5.700e-77
Identity = 178/397 (44.84%), Postives = 236/397 (59.45%), Query Frame = 0
Query:   57 KPGSYTKTSPVLKAAVGLLTDGLNNVA-----------RQEASLSTPEKVVTRLSPTALKQKIEADY-KAAYFLTGAISPEAYDEDCVFMDPTLSFTGLATWSRNINNLKIFFRDPRLDLQGIKLDTTTQTVKTQWRLTCELALPWRPFIDVEGSTLHRY--DPLKGGKVV--EHIESWAISGLAAVLQLFKPGNSRPSPASLPSPPPSKMKGNFRLLANTIFP----LSLSLLPSFSS-SFPSSPSSFVVHAAE--DRRQVADIPASGLVFKDTINVEAFQDPKVKGVTLYVSDFKRPITERLAKDFFSDPSQASVACVRTGLV-VKGDIDTSKQGEEVFSEARSLLFKTIRVRRVYDKDAQALIYVSYSTRFNNKDDDNKSRFKSSICAIPLDQE 430
            K G+Y  T  VLK  V  LT GLN+ A           R  A++S  E      S   L + I  DY + AYFLTG I+   Y ++CVF DPT+SF GL TW RNI +LK+   D RLDLQ I++     +++T+W L+  L LPWRP + + G T H +  DP   G++V  EH+E W +SG  A LQLF     R S           M     LL     P    + LSL   F++  F  SP    +  A+  ++R V +I  SGL+FKDT+NVEA+ DPKV+GVT+Y++DF RPITER  KDFFSDP+  S+ C ++G V +      SK GEEV SEARSLLFK+I+VRR+ D+ +  +IYV+YSTRF + DD NKSRFKSSICA+ ++ +
Sbjct:    8 KAGTYGNTPTVLKGVVSALTGGLNSFADATSSGADKPGRSAAAVSGGEGRSGVSSTADLVEAIREDYTQRAYFLTGDINDSLYADECVFTDPTISFKGLQTWKRNIASLKLLTTDRRLDLQDIRVSPEGSSIQTKWTLSVTLKLPWRPLVSISGGTTHYFASDPADSGRLVVTEHVEEWDVSGWEAFLQLFGT-KGRGSDQRDEENNRGIMMAFKNLLKGFSLPPRGLVMLSLFTLFTTVPFADSPQVAQIGTAQAAEKRLVGEIAGSGLIFKDTLNVEAWSDPKVEGVTIYIADFARPITERFQKDFFSDPTSVSLTCAQSGPVKISPSASRSKDGEEVISEARSLLFKSIKVRRLIDEKSNNIIYVAYSTRFGD-DDSNKSRFKSSICALSVNAQ 402          
BLAST of NO12G01150 vs. NCBI_GenBank
Match: XP_005784930.1 (hypothetical protein EMIHUDRAFT_456079 [Emiliania huxleyi CCMP1516] >EOD32501.1 hypothetical protein EMIHUDRAFT_456079 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 184.1 bits (466), Expect = 9.200e-43
Identity = 86/133 (64.66%), Postives = 110/133 (82.71%), Query Frame = 0
Query:  295 VADIPASGLVFKDTINVEAFQDPKVKGVTLYVSDFKRPITERLAKDFFSDPSQASVACVRTGLV-VKGDIDTSKQGEEVFSEARSLLFKTIRVRRVYDKDAQALIYVSYSTRFNNKDDDNKSRFKSSICAIPL 427
            VADIPASGLVFKDTI +E F DPKV GV LYV+DF+RPITE+L KDFF+DP+QASV C RTG V +   ++ + +GEEVFS++RSL FK+++VRRVYDK+A  ++YVSYS R +  +DDNKSRFKS++C +PL
Sbjct:    7 VADIPASGLVFKDTIKIEGFTDPKVSGVKLYVADFQRPITEKLQKDFFNDPTQASVTCARTGPVKLLEAVEPNGEGEEVFSQSRSLFFKSVKVRRVYDKEANTIVYVSYSVRLSKSEDDNKSRFKSTMCTVPL 139          
BLAST of NO12G01150 vs. NCBI_GenBank
Match: XP_005782424.1 (hypothetical protein EMIHUDRAFT_462894 [Emiliania huxleyi CCMP1516] >EOD29995.1 hypothetical protein EMIHUDRAFT_462894 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 177.2 bits (448), Expect = 1.100e-40
Identity = 86/143 (60.14%), Postives = 111/143 (77.62%), Query Frame = 0
Query:  293 RQVADIPASGLVFKDTINVEAFQDPKVKGVTLYVSDFKRPITERLAKDFFSDPSQ--------ASVACVRTGLV-VKGDIDTSKQGEEVFSEARSLLFKTIRVRRVYDKDAQALIYVSYSTRFNNKDDDNKSRFKSSICAIPL 427
            + VADIPASGLVFKDTI +E F DPKV GV LYV+DF+RPITE+L KDFF+DP+Q        ASV C RTG V +   ++ + +GEEVFS++RSL FK+++VRRVYDK+A  ++YVSYS R +  +DDNKSRFKS++C +PL
Sbjct:   51 QDVADIPASGLVFKDTIKIEGFTDPKVSGVKLYVADFQRPITEKLQKDFFNDPTQANRAACGPASVTCARTGPVKLLEAVEPNGEGEEVFSQSRSLFFKSVKVRRVYDKEANTIVYVSYSVRLSKSEDDNKSRFKSTMCTVPL 193          
BLAST of NO12G01150 vs. NCBI_GenBank
Match: XP_002180938.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC47590.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 176.4 bits (446), Expect = 1.900e-40
Identity = 85/150 (56.67%), Postives = 115/150 (76.67%), Query Frame = 0
Query:  289 AEDRRQVADIPASGLVFKDTINVEAFQDPKVKGVTLYVSDFKRPITERLAKDFFSDPSQASVACVRT--GLVVKGDIDTSKQGEEVFSEARSLLFKTIRVRRVYDKDAQALIYVSYSTRFNNKDDDNKSRFKSSICAIPL--DQEATQTN 435
            A D R V  +  SGLVFKDT+ +EAF DPK++GVTLY+S+F++PITERL   FF+DPS ASVAC +T   + V  +I+ S QGE+VF+E++SLLFK++RV+R+YD D Q  +YVS++TR +  DD NKSRFKSS+CA+PL  + +AT  N
Sbjct:   92 ANDARVVGQLQGSGLVFKDTLQIEAFDDPKIQGVTLYISNFQKPITERLNAGFFNDPSYASVACAQTSPNIRVADNINVSPQGEQVFTESKSLLFKSLRVQRIYDVDKQTAVYVSFNTRLDKSDDSNKSRFKSSLCAVPLSNNNKATAAN 241          
BLAST of NO12G01150 vs. NCBI_GenBank
Match: XP_009033247.1 (hypothetical protein AURANDRAFT_61455 [Aureococcus anophagefferens] >EGB12167.1 hypothetical protein AURANDRAFT_61455 [Aureococcus anophagefferens])

HSP 1 Score: 172.9 bits (437), Expect = 2.100e-39
Identity = 85/135 (62.96%), Postives = 106/135 (78.52%), Query Frame = 0
Query:  289 AEDRRQVADIPASGLVFKDTINVEAFQDPKVKGVTLYVSDFKRPITERLAKDFFSDPSQASVACVRTGLV-VKGDIDTSKQGEEVFSEARSLLFKTIRVRRVYDKDAQALIYVSYSTRFNNKDDDNKSRFKSSIC 423
            AE +R VA I ASGLVFKD + ++AF DPKV+GVTLYVSDF+RP+TERL KDFFSDPSQ+ +AC R   V +  ++DTS +GE+V +EA+SLLFKT++VRRV DK    L+YVSYS R N  DD NK+RF SS+C
Sbjct:  458 AEGKRTVASISASGLVFKDKLIIDAFSDPKVEGVTLYVSDFERPVTERLQKDFFSDPSQSGLACARRAEVKMAANVDTSPEGEDVVTEAKSLLFKTLKVRRVVDKATNTLVYVSYSDRLNKGDDANKARFASSLC 592          
BLAST of NO12G01150 vs. NCBI_GenBank
Match: GAX13886.1 (hypothetical protein FisN_5Lh217 [Fistulifera solaris])

HSP 1 Score: 172.9 bits (437), Expect = 2.100e-39
Identity = 82/143 (57.34%), Postives = 115/143 (80.42%), Query Frame = 0
Query:  289 AEDRRQVADIPASGLVFKDTINVEAFQDPKVKGVTLYVSDFKRPITERL--AKDFFSDPSQASVACVRTG--LVVKGDIDTSKQGEEVFSEARSLLFKTIRVRRVYDKDAQALIYVSYSTRFNNKDDDNKSRFKSSICAIPLD 428
            A + + +  I  SGLVFKDT+ VE+F+DPKV+GVTLY+S+F+RPI ERL  AK+FFSDPS A+VAC RTG  ++V  +I+T+  GEEVF E++SLLFK+++V+R++D D   +IYVS++TR +  DDDNKSRF++S+CA+ LD
Sbjct:  106 AAESQVIGQITGSGLVFKDTLQVESFEDPKVRGVTLYISNFQRPINERLSSAKNFFSDPSSAAVACARTGQKVIVADNINTTPAGEEVFKESKSLLFKSLKVQRIFDMDHNTVIYVSFNTRMDKNDDDNKSRFQNSLCAVNLD 248          
BLAST of NO12G01150 vs. NCBI_GenBank
Match: GAX16844.1 (hypothetical protein FisN_5Hh217 [Fistulifera solaris])

HSP 1 Score: 171.8 bits (434), Expect = 4.700e-39
Identity = 84/146 (57.53%), Postives = 117/146 (80.14%), Query Frame = 0
Query:  286 VHAAEDRRQVADIPASGLVFKDTINVEAFQDPKVKGVTLYVSDFKRPITERL--AKDFFSDPSQASVACVRTG--LVVKGDIDTSKQGEEVFSEARSLLFKTIRVRRVYDKDAQALIYVSYSTRFNNKDDDNKSRFKSSICAIPLD 428
            V AAE  + +  I  SGLVFKDT+ VE+F+DPKV+GVTLY+S+F+RPI ERL  AK+FFSDPS A+VAC RTG  ++V  +I+T+  GEEVF E++SLLFK+++V+R++D +   +IYVS++TR +  DDDNKSRF++S+CA+ LD
Sbjct:   99 VQAAES-QVIGQITGSGLVFKDTLQVESFEDPKVRGVTLYISNFQRPINERLSSAKNFFSDPSSAAVACARTGQTVIVADNINTTPAGEEVFKESKSLLFKSLKVQRIFDMEHNTVIYVSFNTRIDKNDDDNKSRFQNSLCAVNLD 243          
BLAST of NO12G01150 vs. NCBI_GenBank
Match: OLQ13931.1 (hypothetical protein AK812_SmicGene1986 [Symbiodinium microadriaticum])

HSP 1 Score: 169.1 bits (427), Expect = 3.100e-38
Identity = 76/142 (53.52%), Postives = 113/142 (79.58%), Query Frame = 0
Query:  288 AAEDRRQVADIPASGLVFKDTINVEAFQDPKVKGVTLYVSDFKRPITERLAK-DFFSDPSQASVACVRTG-LVVKGDIDTSKQGEEVFSEARSLLFKTIRVRRVYDKDAQALIYVSYSTRFNNKDDDNKSRFKSSICAIPLD 428
            +AE +R V +IPASG +FKDTINVEAF+DPKV GV+LY+SDF R + +R++K DFFSDP  A + C R G +++  D+  SK+GE+VF+E+R++LFKT++V+R+YD DA+ ++YV+++ R +N +D NKSRFKS + A+ +D
Sbjct:   91 SAESKRVVGEIPASGFIFKDTINVEAFEDPKVSGVSLYISDFSRSMADRVSKGDFFSDPGAAGLTCARNGPVMISPDLKPSKEGEDVFTESRAILFKTLKVKRIYDADAKNILYVAFTERMDNNNDSNKSRFKSQVVAVHID 232          
BLAST of NO12G01150 vs. NCBI_GenBank
Match: EJK75890.1 (hypothetical protein THAOC_02375 [Thalassiosira oceanica])

HSP 1 Score: 167.9 bits (424), Expect = 6.800e-38
Identity = 86/162 (53.09%), Postives = 118/162 (72.84%), Query Frame = 0
Query:  269 LLPSFSSSFPSSPSSFVVHA--AEDRRQVADIPASGLVFKDTINVEAFQDPKVKGVTLYVSDFKRPITERLAKDFFSDPSQASVACVRTG-LVVKGDIDTSKQGEEVFSEARSLLFKTIRVRRVYDKDAQALIYVSYSTRFNNKDDDNKSRFKSSICAIPLD 428
            +L SF S+   + S     A  A+  R + +I  SGLVFKDT+ VE+F DPKVKGVTLYVS+F+RP+TER+ KDFF++PS ASV  ++TG + V  +ID S +GE VF E RSLLFK +RV+R+YD++ + ++YVS++TR +   D NKSRFKSSI A+ L+
Sbjct:   31 VLSSFLSASAGALSLATAQAANADGSRTIGEISGSGLVFKDTLKVESFDDPKVKGVTLYVSNFERPLTERIQKDFFTEPSYASVTAIKTGPITVADNIDRSTKGEPVFEEKRSLLFKELRVQRIYDEEKKTVVYVSFNTRLDKGSDSNKSRFKSSISAVSLE 192          
The following BLAST results are available for this feature:
BLAST of NO12G01150 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM25897.13.700e-13771.47Uncharacterized protein family CreA [Nannochlorops... [more]
CEM11152.15.700e-7744.84unnamed protein product [Vitrella brassicaformis C... [more]
XP_005784930.19.200e-4364.66hypothetical protein EMIHUDRAFT_456079 [Emiliania ... [more]
XP_005782424.11.100e-4060.14hypothetical protein EMIHUDRAFT_462894 [Emiliania ... [more]
XP_002180938.11.900e-4056.67predicted protein [Phaeodactylum tricornutum CCAP ... [more]
XP_009033247.12.100e-3962.96hypothetical protein AURANDRAFT_61455 [Aureococcus... [more]
GAX13886.12.100e-3957.34hypothetical protein FisN_5Lh217 [Fistulifera sola... [more]
GAX16844.14.700e-3957.53hypothetical protein FisN_5Hh217 [Fistulifera sola... [more]
OLQ13931.13.100e-3853.52hypothetical protein AK812_SmicGene1986 [Symbiodin... [more]
EJK75890.16.800e-3853.09hypothetical protein THAOC_02375 [Thalassiosira oc... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL124nonsL124Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR014ncniR014Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR006ngnoR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010030NSK010030Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO12G01150.2NO12G01150.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO12G01150.1NO12G01150.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|591969gene_5270Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100048g11gene4612Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO12G01150.2NO12G01150.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO12G01150.1NO12G01150.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO12G01150 ID=NO12G01150|Name=NO12G01150|organism=Nannochloropsis oceanica|type=gene|length=2398bp
AATACAACGGTGTCAGAATGAACGATAAGACTATAGCTGTGTGGTGATGG
TCCGCGTCCTGGCTTTAAAGATGTCGCAGCATCCAACGCAGCAACTGGTA
GAAGCGGCGAGCGGCGACTCGGAGTCTACCACCGAGTGACTGCGTAGTAC
CTCCTGCCCAGGCTTTGCACTCAGCACCCAAGCTGCTTTGCACGACAATG
CGATCCAAATTCGACCCACGCACCACACAACATTAGGATAATTAAGACGA
CGAGTCGATGAAGCACCTCATGGCATCGGCAGCCCTGCTGGCTGTCCTCC
CCTTTTCTGCTCAAGCCTTCCGATTGCCCAGATTCCCAGGCGCAACCTCG
CCTCCCCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA
GCAGCAGCAAGAAAAGAAGCTACAAAAGCCGGGCTCTTACACCAAGACGT
CACCTGTGCTCAAGGCGGCGGTGGGGTTGCTGACAGATGGTTTGAACAAC
GTGgtacgtgtgccgtgtaagcgaggggatgggaggcgtaaaggagatgc
atataccggacgaaattttgcagcggtagctcttacttcgtgtcactgac
gcgcacaacgatacgtcttgacatcaactcgcaccatcgcattcagGCAC
GGCAAGAAGCCTCCCTCTCCACCCCGGAGAAGGTCGTTACCCGCCTGTCC
CCCACAGCTCTCAAGCAAAAAATCGAAGCCGATTACAAGGCCGCCTATTT
CTTGACGGGTGCCATTAGCCCCGAGGCATATGATGAAGATTGCGTCTTTA
TGGgtacgttagtgagagagagatggactggctcggaaaggaaaggctgt
aggatgaaggaagggagggagagccgatcgcagtaggaaagcagaaacgg
cacacttgattaccaaagaagctctgctcgcttattgatatgcacccata
tctcagctttacaccgacgtacaaatacacataaacacacatgcgtcccc
ttttcccttcaagACCCCACGCTTTCCTTCACGGGCCTGGCGACTTGGTC
TCGGAACATAAACAACCTCAAGATCTTCTTCCGTGATCCCCGCCTGGACC
TGCAAGGCATCAAGCTGGACACgtacgtatagacattagttactggattg
attttaaaaaagggagtgaaatggctggtgggaaggactcgtcgtcagca
tctatctgacagactcccttccctccctcctcctccccccttacctcctt
cgccagTACCACTCAAACTGTCAAAACGCAATGGCGGCTGACCTGCGAGC
TCGCCTTGCCATGGCGTCCATTTATTGACGTTGAAGGGAGTACCCTTCAC
CGCTATGATCCTCTAAAAGGAGGCAAAGTTGTCGAACACATAGAGAGTTG
GGCCATCTCCGGTCTCGCTGCTGTACTCCAACTGTTCAAGCCCGGCAACA
GCCGTCCTTCCCCTGCCTCCCTCCCTTCCCCGCCTCCTTCCAAAATGAAA
GGAAACTTCCGTCTGCTTGCCAACACCATCTTCCCCCTTTCCCTCTCCCT
CCTCCCCTCGTTCTCGTCCTCCTTCCCTTCCTCGCCCTCCTCTTTCGTGG
TTCACGCTGCGGAAGACCGTCGACAGGTAGCGGATATACCAGCTTCTGGC
CTCGTCTTCAAAGACACTATTAATGTAGAGGCTTTCCAGgtcagtttctg
gttcttgttttctctcctgctcttcctctcctcccctgccacccctcttt
cctcaaccttgtccccaccattggctggctcaccctctgcctctggcaca
cacgcacacacaaattagGATCCTAAGGTAAAAGGGGTGACCCTGTATGT
CTCTGACTTCAAGCGCCCTATCACTGAGAGACTCGCGAAGGACTTCTTCT
CGGATCCGAGCCAAGCCTCCGTGGCGTGCGTGCGGACGGGCCTGGTGGTG
AAGGGGGATgtgagtttgggggagggcgggaggtagggagggagtgcaga
agtgagggagaatacggtagacgtgattgtactcgatcgtcaataatagc
ttcctacgagtgctagttgttctacttattttctcactgccttcttccct
tccgtcagATCGATACTTCGAAGCAAGGCGAGGAGGTGTTTTCCGAAGCC
CGTTCCCTCCTCTTCAAGACTATTCGTGTTCGTCGTGTGTACGATAAAGA
TGCCCAGGCATTAATTTACGTTTCGTATTCGACGCGATTTAACAATAAAG
ATGATGATAACAAAAGTCGGTTTAAATCGTCCATATGTGCAATTCCGCTG
GACCAGGAGGCGACACAGACAAATTAGAGAGAGGAAAGGAGGGAGGGAGG
GAGAAAGAGAGAGGTACAAAAATAGCTTAAAAAAGGCATTACATAGAT
back to top

protein sequence of NO12G01150.2

>NO12G01150.2-protein ID=NO12G01150.2-protein|Name=NO12G01150.2|organism=Nannochloropsis oceanica|type=polypeptide|length=371bp
MKHLMASAALLAVLPFSAQAFRLPRFPGATSPPQQQQQQQQQQQQQQQQQ
QEKKLQKPGSYTKTSPVLKAAVGLLTDGLNNVARQEASLSTPEKVVTRLS
PTALKQKIEADYKAAYFLTGAISPEAYDEDCVFMDPTLSFTGLATWSRNI
NNLKIFFRDPRLDLQGIKLDTTTQTVKTQWRLTCELALPWRPFIDVEGST
LHRYDPLKGGKVVEHIESWAISGLAAVLQLFKPGNSRPSPASLPSPPPSK
MKGNFRLLANTIFPLSLSLLPSFSSSFPSSPSSFVVHAAEDRRQVADIPA
SGLVFKDTINVEAFQDPKVKGVTLYVSDFKRPITERLAKDFFSDPSQASV
ACVRTGLVVKGDVSLGEGGR*
back to top

protein sequence of NO12G01150.1

>NO12G01150.1-protein ID=NO12G01150.1-protein|Name=NO12G01150.1|organism=Nannochloropsis oceanica|type=polypeptide|length=435bp
MKHLMASAALLAVLPFSAQAFRLPRFPGATSPPQQQQQQQQQQQQQQQQQ
QEKKLQKPGSYTKTSPVLKAAVGLLTDGLNNVARQEASLSTPEKVVTRLS
PTALKQKIEADYKAAYFLTGAISPEAYDEDCVFMDPTLSFTGLATWSRNI
NNLKIFFRDPRLDLQGIKLDTTTQTVKTQWRLTCELALPWRPFIDVEGST
LHRYDPLKGGKVVEHIESWAISGLAAVLQLFKPGNSRPSPASLPSPPPSK
MKGNFRLLANTIFPLSLSLLPSFSSSFPSSPSSFVVHAAEDRRQVADIPA
SGLVFKDTINVEAFQDPKVKGVTLYVSDFKRPITERLAKDFFSDPSQASV
ACVRTGLVVKGDIDTSKQGEEVFSEARSLLFKTIRVRRVYDKDAQALIYV
SYSTRFNNKDDDNKSRFKSSICAIPLDQEATQTN*
back to top
Synonyms
Publications