NO12G01130, NO12G01130 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO12G01130 vs. NCBI_GenBank
Match: EWM25907.1 (periplasmic binding protein [Nannochloropsis gaditana]) HSP 1 Score: 534.6 bits (1376), Expect = 3.200e-148 Identity = 260/324 (80.25%), Postives = 289/324 (89.20%), Query Frame = 0 Query: 167 PLRIASFLPAATEMLFSLGLGDLVCGITHECDYPPEAKQKPVVVECVLDLEGLTMKEIDEAVSARLKSGKSLYNVNEDKLRIAAPTLLVTQNLCQVCGPSGNEVTQVLKTLKPPPTIVWQTPKTFEEVLSAYLELGRATGKEKEAEKWVQESRAKVKEIRENVQAVMSRKEGGKAVRVAFVEWIDPIFAGGHWVGEMLEWAGGDDANSRKGKDSVRVPWDDVLAWQPEVIIVSPCGFDLKKSTEQAKLLMKRDGFMDLPAAKQDRVYAVDANGYFARPGIRLVEGVLLLAHMIHGGENFPWTGAEDAFARVPVEGEEGRGETKE 491 PLRIASFLPAATEMLFSLGLGD V GITHECDYPPEAK+KPVVVECVL+LEGL+MKEIDEAVSARLKSGKSLYNVNE+KLR AAPTLLVTQNLCQVCGPSGNEVTQVLKTLKPPP IVWQTPKTFEEVL AYLELG+ TGKE+E++ WV+ SR +V +IR VQ + + VRVAFVEWIDPIFAGGHWVGEMLEWAGG+D NSRKG+DSVR+PW++V+AW PEVIIVSPCGFDL+KS EQA+LLM+R+GF LPAAK DRVYAVDANGYFARPGIRLV+G+LLLAH+IHG ++FPWTG DAFA VPVEGE G E +E Sbjct: 17 PLRIASFLPAATEMLFSLGLGDNVVGITHECDYPPEAKKKPVVVECVLNLEGLSMKEIDEAVSARLKSGKSLYNVNEEKLRTAAPTLLVTQNLCQVCGPSGNEVTQVLKTLKPPPEIVWQTPKTFEEVLEAYLELGKRTGKEEESKAWVEASRKRVADIRGKVQMQVDGQGNKGRVRVAFVEWIDPIFAGGHWVGEMLEWAGGEDVNSRKGRDSVRIPWEEVIAWAPEVIIVSPCGFDLEKSREQARLLMQREGFHALPAAKADRVYAVDANGYFARPGIRLVDGLLLLAHLIHGPKSFPWTGPADAFAHVPVEGEGGGREAEE 340
BLAST of NO12G01130 vs. NCBI_GenBank
Match: WP_079566386.1 (cobalamin-binding protein [Bradyrhizobium erythrophlei] >SHG48566.1 iron complex transport system substrate-binding protein [Bradyrhizobium erythrophlei]) HSP 1 Score: 326.6 bits (836), Expect = 1.300e-85 Identity = 163/309 (52.75%), Postives = 211/309 (68.28%), Query Frame = 0 Query: 169 RIASFLPAATEMLFSLGLGDLVCGITHECDYPPEAKQKPVVVECVLDLEGLTMKEIDEAVSARLKSGKSLYNVNEDKLRIAAPTLLVTQNLCQVCGPSGNEVTQVLKTLKPPPTIVWQTPKTFEEVLSAYLELGRATGKEKEAEKWVQESRAKVKEIRENVQAVMSRKEGGKAVRVAFVEWIDPIFAGGHWVGEMLEWAGGDDANSRKGKDSVRVPWDDVLAWQPEVIIVSPCGFDLKKSTEQAKLLMKRDGFMDLPAAKQDRVYAVDANGYFARPGIRLVEGVLLLAHMIHGGENFPWTGAEDAFARV 478 RI SFLP+ATEM+ +LGLGD + G+THECDYPPE K VVV VL +E ++ EID AV+ RL+ G SLY V+E +R AP L++TQ LCQVC PSGNEV+Q+LK L P I+W TPK+ E++ +LG ATG+ AE + E RA++++I +A SR RV +EW+DP++ GHWV EM+ AGG D R+G DSVR+PW DVL W+PEV+IV PCGF L+K+ +QA++L G+ DLPA RVYAVDAN YFARPG R+VEG LLAH++H G F W G AF ++ Sbjct: 6 RIVSFLPSATEMVCALGLGDRLLGVTHECDYPPEIAGKTVVVRNVLPIETMSQPEIDSAVTQRLRDGLSLYRVDETLMREIAPDLILTQELCQVCAPSGNEVSQLLKVLPSQPQILWLTPKSLEQIFDNLRDLGEATGRSHIAENLIAEGRARLEKIEAAARAAPSRP------RVFCMEWMDPVYCCGHWVPEMVRIAGGIDGLGREGTDSVRIPWQDVLQWKPEVLIVMPCGFGLEKAADQARMLASYPGWADLPAVGDGRVYAVDANAYFARPGPRVVEGTELLAHLLHPG-LFEWKGPPGAFRKL 307
BLAST of NO12G01130 vs. NCBI_GenBank
Match: WP_072817977.1 (cobalamin-binding protein [Bradyrhizobium erythrophlei] >SHN72543.1 iron complex transport system substrate-binding protein [Bradyrhizobium erythrophlei]) HSP 1 Score: 318.2 bits (814), Expect = 4.800e-83 Identity = 157/309 (50.81%), Postives = 214/309 (69.26%), Query Frame = 0 Query: 169 RIASFLPAATEMLFSLGLGDLVCGITHECDYPPEAKQKPVVVECVLDLEGLTMKEIDEAVSARLKSGKSLYNVNEDKLRIAAPTLLVTQNLCQVCGPSGNEVTQVLKTLKPPPTIVWQTPKTFEEVLSAYLELGRATGKEKEAEKWVQESRAKVKEIRENVQAVMSRKEGGKAVRVAFVEWIDPIFAGGHWVGEMLEWAGGDDANSRKGKDSVRVPWDDVLAWQPEVIIVSPCGFDLKKSTEQAKLLMKRDGFMDLPAAKQDRVYAVDANGYFARPGIRLVEGVLLLAHMIHGGENFPWTGAEDAFARV 478 RI SFLP+ATEM +LGL D + GITHECDYPP+ KPVVV VL +E ++ EID AV+ RL+ G+SLY V E ++ AP L++TQ+LCQVC PSGNE++Q+L +L P ++W TPK+ E++ ELG ATG+ + AE + + +A++ +I +A++SR RV +EW+DP++ GHWV EM+ AGG D R+G DSVR+ WDDVL W+PEV+IV PCGFDL+K+ ++A+ L G+ DLPA + VYAVDAN YFARPG R++EG LLAH++H E F W G +AF R+ Sbjct: 6 RIVSFLPSATEMACALGLSDQLLGITHECDYPPQIMGKPVVVRNVLPIESMSQAEIDVAVTQRLRDGQSLYRVEEALMQDIAPDLILTQDLCQVCAPSGNEISQLLTSLPSKPQVLWLTPKSLEQIFDNLRELGEATGRSEMAETLIADGQARLAKIESVTRALVSRP------RVFCMEWMDPVYCCGHWVPEMVRMAGGLDKLGREGADSVRIRWDDVLEWKPEVLIVMPCGFDLEKTFKEAQRLTAYPGWDDLPAVRNGCVYAVDANSYFARPGPRVIEGTELLAHLLH-PELFEWRGPANAFRRL 307
BLAST of NO12G01130 vs. NCBI_GenBank
Match: OIO38651.1 (hypothetical protein AUJ72_02145 [Candidatus Omnitrophica bacterium CG1_02_46_14]) HSP 1 Score: 300.8 bits (769), Expect = 7.900e-78 Identity = 149/309 (48.22%), Postives = 211/309 (68.28%), Query Frame = 0 Query: 168 LRIASFLPAATEMLFSLGLGDLVCGITHECDYPPEAKQKPVVVECVLDLEGLTMKEIDEAVSARLKSGKSLYNVNEDKLRIAAPTLLVTQNLCQVCGPSGNEVTQVLKTLKPPPTIVWQTPKTFEEVLSAYLELGRATGKEKEAEKWVQESRAKVKEIRENVQAVMSRKEGGKAVRVAFVEWIDPIFAGGHWVGEMLEWAGGDDANSRKGKDSVRVPWDDVLAWQPEVIIVSPCGFDLKKSTEQAKLLMKRDGFMDLPAAKQDRVYAVDANGYFARPGIRLVEGVLLLAHMIHGGENFPWTGAEDAFAR 477 +RI SFLP+ATE++ SLGL D + GITHEC+YPPEA+ KP+VV + +EG+T +EIDE VS L+SG +LY VNE LR P +++TQ+LCQVC PSGNE++ VLK+L P I+ TPK + L +G A GK A K ++ + +V+ +R + + K RV +EW DP++ GGHW+ E+ E AGG DA +R+G+DSVR+ W +V W PEV+I+SPCG+++K + ++AK L + + +LPA K ++VYAVDA YFARPG R+V+G+ LLAH+IH E F W G ++A+ R Sbjct: 1 MRIVSFLPSATEIVCSLGLADELVGITHECNYPPEAQGKPIVVRNEIKMEGMTDREIDETVSRVLRSGGTLYRVNESLLRELDPDIIMTQDLCQVCAPSGNEISVVLKSLPRKPQILRLTPKNLSGIFENILTVGTAAGKTDVANKNIEVLKVRVEFVRNEAKKIR------KKPRVFLMEWFDPLYCGGHWIQELTEIAGGCDALARQGRDSVRISWREVKDWAPEVLILSPCGYNVKDAVKRAKDLPREPVWNELPAVKMNQVYAVDAQSYFARPGPRIVDGLELLAHLIH-PEEFDWQGPQNAYER 302
BLAST of NO12G01130 vs. NCBI_GenBank
Match: WP_090571710.1 (cobalamin-binding protein [Nitrosomonas sp. Nm33] >SDY87197.1 iron complex transport system substrate-binding protein [Nitrosomonas sp. Nm33]) HSP 1 Score: 290.0 bits (741), Expect = 1.400e-74 Identity = 144/318 (45.28%), Postives = 209/318 (65.72%), Query Frame = 0 Query: 169 RIASFLPAATEMLFSLGLGDLVCGITHECDYPPEAKQKPVVVECVLDLEGLTMKEIDEAVSARLKSGKSLYNVNEDKLRIAAPTLLVTQNLCQVCGPSGNEVTQVLKTLKPPPTIVWQTPKTFEEVLSAYLELGRATGKEKEAEKWVQESRAKVKEIRENVQAVMSRKEGGKAVRVAFVEWIDPIFAGGHWVGEMLEWAGGDDANSRKGKDSVRVPWDDVLAWQPEVIIVSPCGFDLKKSTEQ---------AKLLMKRDGFMDLPAAKQDRVYAVDANGYFARPGIRLVEGVLLLAHMIHGGENFPWTGAEDAFARV 478 RI SFLP+ATEM+ +LGL D + GITHEC+YP K+KP+VV VL +E ++ EID AV+ RL+ G+SLY ++E+ L AP L++TQNLCQVC PSGNEV+QVLK L P I+W TP++ E+ + +L A G+ ++ E+ + + RA++++++ + R RV +EW+DP++A GHWV EM++ AGG D G +SVRV W+ + W PEV+++ PCGF+L+++ +Q + R F +LPA + +RV+AVDAN +FARPG R+V+G LLAH+ H E F W G DAF +V Sbjct: 3 RIVSFLPSATEMVCALGLSDSLVGITHECNYPELVKRKPIVVRNVLPVETMSQSEIDRAVAERLRDGQSLYQIDEELLASLAPDLILTQNLCQVCAPSGNEVSQVLKALPHEPQILWMTPQSLSEIFDSLRDLDAAVGQTEKVEELIADCRARLEKLKSKTSRLAYRP------RVFCMEWLDPVYACGHWVPEMVKIAGGMDEIGSDGGESVRVAWERLAEWAPEVLVMMPCGFNLQQTMKQIWQHFGPYSSFAAENRAAFFNLPAVRDNRVFAVDANSFFARPGPRVVDGTELLAHLFHPNE-FSWDGPTDAFQQV 313
BLAST of NO12G01130 vs. NCBI_GenBank
Match: KRT62957.1 (periplasmic binding protein, iron complex transport system substrate-binding protein [Candidatus Dadabacteria bacterium CSP1-2]) HSP 1 Score: 259.2 bits (661), Expect = 2.600e-65 Identity = 123/293 (41.98%), Postives = 193/293 (65.87%), Query Frame = 0 Query: 168 LRIASFLPAATEMLFSLGLGDLVCGITHECDYPPEAKQKPVVVECVLDLEGLTMKEIDEAVSARLKSGKSLYNVNEDKLRIAAPTLLVTQNLCQVCGPSGNEVTQVLKTLKPPPTIVWQTPKTFEEVLSAYLELGRATGKEKEAEKWVQESRAKVKEIRENVQAVMSRKEGGKAVRVAFVEWIDPIFAGGHWVGEMLEWAGGDDANSRKGKDSVRVPWDDVLAWQPEVIIVSPCGFDLKKSTEQAKLLMKRDGFMDLPAAKQDRVYAVDANGYFARPGIRLVEGVLLLAHMIH 461 +RI SFLP+ATE++++LGLGD + G+THECDYPPEA+ KP V+ +++ E LT EID+AVS K+GKS Y V+ + LR P +++TQ LC VC SGNEV +V+K L P I+ P T +E+L+ L +G AT +++++E V R+++ I+ + R RV +EW+DP + GHWV EM+ AGGD + GK S +V WD++ + P+VI++ PCGF+++++ + ++L + + +PA ++ VY VDAN YF+RPG R+++G+ +LA ++H Sbjct: 1 MRICSFLPSATEIVYALGLGDNLVGVTHECDYPPEARSKPRVIASLINPEDLTSYEIDKAVSENYKAGKSTYIVDVETLRRTNPDIIITQGLCDVCAVSGNEVKEVVKVLGHKPQIISLEPNTLDEILNTILLVGEATERKEQSEYLVNNLRSRIAAIKSLLGEEKDRP------RVFCMEWLDPPYVAGHWVPEMVRIAGGDYGFGKVGKPSFKVSWDEIFDFAPQVIVLMPCGFNIERTLREVEILTSNEYWHRIPAVRKGHVYLVDANSYFSRPGPRILDGLKILARILH 287
BLAST of NO12G01130 vs. NCBI_GenBank
Match: GBD38425.1 (Vitamin B12-binding protein [bacterium HR37]) HSP 1 Score: 255.8 bits (652), Expect = 2.900e-64 Identity = 125/293 (42.66%), Postives = 186/293 (63.48%), Query Frame = 0 Query: 168 LRIASFLPAATEMLFSLGLGDLVCGITHECDYPPEAKQKPVVVECVLDLEGLTMKEIDEAVSARLKSGKSLYNVNEDKLRIAAPTLLVTQNLCQVCGPSGNEVTQVLKTLKPPPTIVWQTPKTFEEVLSAYLELGRATGKEKEAEKWVQESRAKVKEIRENVQAVMSRKEGGKAVRVAFVEWIDPIFAGGHWVGEMLEWAGGDDANSRKGKDSVRVPWDDVLAWQPEVIIVSPCGFDLKKSTEQAKLLMKRDGFMDLPAAKQDRVYAVDANGYFARPGIRLVEGVLLLAHMIH 461 +RI SFLP+ATE+LF LGLG+ + G+THECDYPPEAK KP VV ++D LT +EI+ V +SGKS Y V ++ L A P ++ TQ LC VC SGNEV + + L P IV P T EE+L L +G TG+E A + V + RA+++ +R V R RV +EW+DP + GHW+ EM++ AGG ++ G+ S +V W+++ + P+VI+V PCGFD++++ E+ ++L + + LPA ++ VY VDAN YF+R G R+V+G+ ++A ++H Sbjct: 1 MRICSFLPSATEILFELGLGEYIVGVTHECDYPPEAKSKPRVVVSLIDPSRLTSREIERIVGENYRSGKSTYLVEKESLLKARPDIIFTQKLCDVCAVSGNEVKEAVDVLGYSPKIVSLEPSTLEEILDTILIVGEVTGRETRAREVVNKLRARIEAVRTMVGNEKDRP------RVFCLEWLDPPYTAGHWIPEMVDIAGGICGFAKPGQPSFKVSWEEIYEFAPQVIVVMPCGFDIERTLEEIEILNSNEFWYRLPAVRKGHVYLVDANSYFSRSGPRVVDGLEIIARILH 287
BLAST of NO12G01130 vs. NCBI_GenBank
Match: OLC72603.1 (hypothetical protein AUH87_01295, partial [Deltaproteobacteria bacterium 13_1_40CM_4_54_4]) HSP 1 Score: 243.4 bits (620), Expect = 1.500e-60 Identity = 122/278 (43.88%), Postives = 173/278 (62.23%), Query Frame = 0 Query: 168 LRIASFLPAATEMLFSLGLGDLVCGITHECDYPPEAKQKPVVVECVLDLEGLTMKEIDEAVSARLKSGKSLYNVNEDKLRIAAPTLLVTQNLCQVCGPSGNEVTQVLKTLKPPPTIVWQTPKTFEEVLSAYLELGRATGKEKEAEKWVQESRAKVKEIRENVQAVMSRKEGGKAVRVAFVEWIDPIFAGGHWVGEMLEWAGGDDANSRKGKDSVRVPWDDVLAWQPEVIIVSPCGFDLKKSTEQAKLLMKRDGFMDLPAAKQDRVYAVDANGYFARPG 446 +RI S LP+ATE+ F+LGLGD V G+THECDYP EA+QKP+VV ++D ++ EID VS RL+ SLY ++E K R AAP L++TQ LC+VC NEV K+LK P TI+ +P +VL +G T + A VQ S +++ +R+ +R RVA +EW DP++A GHWV EM+E AGG D R+ + S RV W VL PE+I++ PCGF+L+++ +++ +L K G+ LPA K VY V+ + +F+RPG Sbjct: 1 MRICSLLPSATEIAFALGLGDDVVGVTHECDYPHEARQKPIVVRSLIDANPMSSAEIDGWVSERLRGNLSLYGIDEVKFREAAPDLILTQELCEVCAVDYNEVAAAAKSLKEPATILALSPHCLTDVLRDIERVGAVTARADAARALVQRSHERIERVRQTAAQSNTRP------RVACLEWFDPVYAAGHWVPEMVELAGGFDVLGRREEPSARVEWTQVLDSVPEIIVLMPCGFELRRTIQESAVLQKLPGWNHLPAVKNGHVYGVNGSAFFSRPG 272
BLAST of NO12G01130 vs. NCBI_GenBank
Match: OGE24557.1 (hypothetical protein A3J42_10440 [Candidatus Dadabacteria bacterium RIFCSPHIGHO2_12_FULL_53_21]) HSP 1 Score: 243.0 bits (619), Expect = 2.000e-60 Identity = 120/293 (40.96%), Postives = 184/293 (62.80%), Query Frame = 0 Query: 168 LRIASFLPAATEMLFSLGLGDLVCGITHECDYPPEAKQKPVVVECVLDLEGLTMKEIDEAVSARLKSGKSLYNVNEDKLRIAAPTLLVTQNLCQVCGPSGNEVTQVLKTLKPPPTIVWQTPKTFEEVLSAYLELGRATGKEKEAEKWVQESRAKVKEIRENVQAVMSRKEGGKAVRVAFVEWIDPIFAGGHWVGEMLEWAGGDDANSRKGKDSVRVPWDDVLAWQPEVIIVSPCGFDLKKSTEQAKLLMKRDGFMDLPAAKQDRVYAVDANGYFARPGIRLVEGVLLLAHMIH 461 +RI SFLP+ TE+L+ LGLG+ V G+THECDYPPEA++K V+ +D L+ +EIDE VS GKS Y +++D L+ A P L++TQ LCQVC SGNEVT+ ++ L P I+ P+T E++ L +G ATG A +E K+ E E V++++ + RV +EW+DP + GHWV EM+E AGG + G+ S +V W ++ + P+++ + PCG+D++K+ + + + K D + LP+ + ++Y DAN YF+RPG R+V+G+ +LA IH Sbjct: 1 MRICSFLPSTTEILYDLGLGNSVTGVTHECDYPPEAREKKRVIMSFIDPGKLSSREIDELVSRNAAEGKSTYLIDKDALKEADPDLILTQELCQVCAVSGNEVTEAVEALGKKPRIISLEPRTLSEIIDTILIIGEATGTGDRA----REITDKLVERIERVRSLLGNER--DRPRVFCMEWLDPPYVAGHWVPEMVEIAGGSCGIGKAGEPSFKVSWKEIADFAPQMLFIMPCGYDVEKTLCEIETVTKHDEWFSLPSTSKGQIYIFDANSYFSRPGPRVVDGLEILAKTIH 287
BLAST of NO12G01130 vs. NCBI_GenBank
Match: OGQ78796.1 (hypothetical protein A3F90_15170 [Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_60_19]) HSP 1 Score: 241.9 bits (616), Expect = 4.300e-60 Identity = 120/293 (40.96%), Postives = 179/293 (61.09%), Query Frame = 0 Query: 168 LRIASFLPAATEMLFSLGLGDLVCGITHECDYPPEAKQKPVVVECVLDLEGLTMKEIDEAVSARLKSGKSLYNVNEDKLRIAAPTLLVTQNLCQVCGPSGNEVTQVLKTLKPPPTIVWQTPKTFEEVLSAYLELGRATGKEKEAEKWVQESRAKVKEIRENVQAVMSRKEGGKAVRVAFVEWIDPIFAGGHWVGEMLEWAGGDDANSRKGKDSVRVPWDDVLAWQPEVIIVSPCGFDLKKSTEQAKLLMKRDGFMDLPAAKQDRVYAVDANGYFARPGIRLVEGVLLLAHMIH 461 +RI S LP+ATE+ F+LGLGD + G+THECDYPPEAK+K VVV+ +D E L ++IDE+V ++ K +Y ++ + R A P ++TQ+LC VC +EV + +K L PP IV P +VL +G + GK+ A + V+ +++ SR RV +EW+DP+++ GHWV EM+E AGG D +KGK S + W+ V + PEVI++ PCGFD+ ++ + + R G+ LPA K RV+AV+ + YF RPG RLV+G+ +LA ++H Sbjct: 1 MRICSLLPSATEIAFALGLGDEIVGVTHECDYPPEAKEKRVVVKSAIDSEKLASRDIDESVQRHVRERKGIYAIDLLRFRAANPDYIITQDLCDVCALDYHEVMEAVKWLTAPPKIVSLAPTRLADVLRDIERIGVSAGKQVAANELVRRLGERIEXXXXXXXXXXSRP------RVVCIEWLDPLYSAGHWVPEMVELAGGVDGLGKKGKPSEEIAWETVREFAPEVIVLMPCGFDVARTLRELPSVQDRPGWGKLPAVKAGRVFAVNGSAYFNRPGPRLVDGLEILAQIVH 287 The following BLAST results are available for this feature:
BLAST of NO12G01130 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO12G01130 ID=NO12G01130|Name=NO12G01130|organism=Nannochloropsis oceanica|type=gene|length=2476bpback to top protein sequence of NO12G01130.1 >NO12G01130.1-protein ID=NO12G01130.1-protein|Name=NO12G01130.1|organism=Nannochloropsis oceanica|type=polypeptide|length=510bpback to top Synonyms
Publications
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