NO12G01100, NO12G01100 (gene) Nannochloropsis oceanica

Overview
NameNO12G01100
Unique NameNO12G01100
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4211
Alignment locationchr12:345966..350176 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr12genomechr12:345966..350176 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0000145exocyst
GO:0000145exocyst
Vocabulary: Biological Process
TermDefinition
GO:0006887exocytosis
GO:0006887exocytosis
Vocabulary: INTERPRO
TermDefinition
IPR010326Sec6
Homology
BLAST of NO12G01100 vs. NCBI_GenBank
Match: EWM25893.1 (hypothetical protein Naga_100048g6 [Nannochloropsis gaditana])

HSP 1 Score: 854.7 bits (2207), Expect = 3.400e-244
Identity = 600/1332 (45.05%), Postives = 768/1332 (57.66%), Query Frame = 0
Query:   27 EGEGEREMEEAGDT--STLAMVASIVETPPSKHKAFNPTTKKVSCPQHEDVVIARHKLRTGVISIPCWRCIGEIALRFEEGETAAEARVHYLHEALQSERERAVVLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSHVITMNKRLELHLASNRPASCFTPISPHSSLFSSSANVAVP-------------------------------------------------VPMAEFPPVGAEAAVEAPAAETYP----GSRPPTPR--QPAAMAALVKSAGAVGNESRNTNPSSSTFSPFSSTGVLSPGMILKAEDTSDVGHERRQQQQPSRSSTKGDNSNIASDINRITNIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLRPESPMPQALGAGGRERG-----------VKGEVKSEQG--VQGWEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFGRKRRSSFKSLPPSLPPRPSS-SASDLDNELDEILSVDVLAKRLIQLLKTRPDALLKIYRKSEMLEKWRMEVLLDLGM----EGRE-----KEKEKRIERRLDGSGSAWENEEVIGGGTDGGIPSFHMEHSVSTIFADQMELVGSLTDRIKQTVMSHVSDAFRLSLTTPRLLEQALTVVKLHRDFNKEKLDVARQKMERAGTKSLDWVLRLCGIEDWDGEVRLVLKEAAALRALEVFTVAHLEAAAAMDEGGKE---GLSREAAMIGAAECLLEDLKEVLGRIPKFFGEEHKARHLIRGQYDAHLMRQVAGLHRHGLSDVEIGDLFEINRFLLKYQREVVLLGAEAPSAEVKVAAQACLQECLVKTRQQMGRWYEAILGRRSEVLFDADGRPFTANPEDLFQIVHTQVRVAMDAGGFVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLSVSGLCAVVNDYDRLYDKAAELRDELLGREKLSQEKHYTLIDNVMDLLSDEQVRVSFEATRMIAFQVMKDATGSLLEFSPFDVDG---------GVVVG---------GREIGDGRKQQR------QQPQ----------------------LLLSR------------VDALEDARLTIKDYFSDLEAWLPGYFFAHVVKSCYESLVNLYLVSILRGRTVWGDVEVVAHRMRQDKQTLLSYFGQEQGLAQALEEVGVGEPELVFGAWDAIREVVLNGDGLRNERTAALLMVLPPPWNVDAVLQIRALRGEEVGDRKARQEARQKLADWYRAELQPIVQGAALAGSRKGREEVKEGEKTALVVGRELAWRFQTSPMSVRREQVLVLVGESVYN 1218
            +G G+    EA D    T A +A +   P   HKAFNPTTKK+ CP H+DV++ RHKLRTGV +IPCWRC+GE A+R EE ET AE R  YLH ALQSE+ R  +LE XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  V  MN+RL      N+       +    S+  + + V+ P                                                  P++  P  G +  + AP  E  P      RPP PR  +P+ +++   ++    +ES    P      P S T   S  +      ++  G +    +  + +  +     +A+  ++IT++                                             T    S  P    AGG               ++G+ ++E G   QG E                             LF R +R+S  S+P +         A    +ELDE L VD +AKR+++LL++RP+AL KIYRKSE LE+WRMEVLL+LG+     GRE     +E E+  E++ +G G                 P   ++HS S IF D++ LV +LTDRIKQ V+ HV+DAF L+  +P LL QA+ VV+LH  F K+KL+ A+ K+ R G+K L  VLRLCGIEDWDG+VRL LKEAA++RALEVFTVAHLEAAAAM+EGG+    G+SRE AMIGAAE LLED++E+L  +P FF   H+A   I  +YD HLMRQVA LH HGLSD+EIGDLFE+NRFLL+Y+R++V+LGA AP+A +++A QACLQECLVKTR Q   W+ AILGR+ EVL+DA GRPFTA PEDLFQI+HTQVRVA+DAGGF                                XXXXXXXXXXXX  LSVSGLCA+VNDYDRLYDKA ELRD LLGR +LS++KH+ L+DNVMD L+DEQ RVSFEATR++++Q+M++AT SLLE SPFD +G         GV  G         G   G G ++ R      ++PQ                       LL R            VD +++A LTI DYF+D++ WLP YFFAHVV+ CYESLV+LYLVS+LRGRTV+ D E VAHRMRQ++Q LL    ++ G   +L E G+ +P LVFGAW+A+  VVL G G+  + TA LLMVLPPPWNVDA+LQ+R LRGE++GDRKA  E RQ+L  WY AELQP V GAALAGS  G+   KEGE  A  VGRELAWR +TSP++V  ++++ LV ESVYN
Sbjct:   23 QGTGKWTKGEAEDVHCDTSAAMAKLNSAPTRPHKAFNPTTKKLPCPHHKDVIVCRHKLRTGVTTIPCWRCMGEAAVRAEERETTAEIRAQYLHIALQSEKGRTAMLERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNGMNRRLMTQFRPNKSTPLKDCLKSGHSVHKTLSEVSAPDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGETTTQPPEQAHSTCTSSTPLSGSP--GKDVTLSAPGGEAGPPLSLSCRPPPPRNQEPSHVSSAWSASPPTPSESVAARP-----LPASPTASASRAL------SATAGSQGAAWRARAATDPEVAPIRVATGPHKITSM---------------------------------------------TAGTHSQAPTESAAGGGSGSMPPSRPSLPAWLQGKRQAEAGPRAQGGE---QNERQKSRTPQEGGRPKDGKKKRVWTLFKRGKRAS--SIPAAAAAASGGVRAPTTMDELDEALPVDRMAKRMLRLLESRPEALEKIYRKSEQLEEWRMEVLLELGVGEETGGREDGGSLQEGEEDKEKKAEGEGRT--------------SPVQGLDHSASRIFLDEIALVEALTDRIKQCVLRHVADAFTLARASPSLLHQAVNVVRLHAAFGKKKLETAQAKIARTGSKDLYRVLRLCGIEDWDGDVRLALKEAASVRALEVFTVAHLEAAAAMEEGGQTSVMGVSREKAMIGAAESLLEDMREMLVLVPPFFAPAHRAVSTILEEYDTHLMRQVAALHGHGLSDLEIGDLFEVNRFLLRYRRDIVVLGASAPNANLQMAVQACLQECLVKTRHQTSVWFTAILGRQGEVLYDAQGRPFTAKPEDLFQIIHTQVRVAIDAGGFTGDDLCALLLVILNALKEFVAEHHNDLRAHEYXXXXXXXXXXXXIPLSVSGLCALVNDYDRLYDKAVELRDNLLGRGELSEKKHFVLLDNVMDQLNDEQARVSFEATRLVSYQIMQEATVSLLEISPFDTEGRAPVRKLPTGVSDGGGMPVWVGTGDRSGLGNRRNRGANPSGERPQGSDKDAQNDGNSTHMFSMPYATTLLDRTTERKTSASPRHVDVMKEACLTIMDYFADIQVWLPAYFFAHVVRMCYESLVDLYLVSVLRGRTVFVDPESVAHRMRQEQQKLLLDLARKNGWESSLREAGLKDPALVFGAWEAMERVVLRGGGMNEKETADLLMVLPPPWNVDALLQLRLLRGEDLGDRKAIHETRQRLTAWYMAELQPQVLGAALAGS--GQSARKEGEADAATVGRELAWRLKTSPLAVDEDRLVELVRESVYN 1275          
BLAST of NO12G01100 vs. NCBI_GenBank
Match: EWM24972.1 (Exocyst complex component Sec6 [Nannochloropsis gaditana])

HSP 1 Score: 227.3 bits (578), Expect = 2.600e-55
Identity = 204/785 (25.99%), Postives = 339/785 (43.18%), Query Frame = 0
Query:  456 DLDNELDEILSVDVLAKR---LIQLLKTRPDALLKIYRKSEMLEKWRMEVLLDLGMEGREKEKEKRIERRLDGSGSAWENEEVIGGGTDGGIPSFHMEHSVSTIFADQMELVGSLTDRIKQTVMSHVSDAFRLSLTTPRLLEQALTVVKLHRDFNKEKLDVARQKMERAGTKSLDWVLRLCGIEDWDGEVRLVLKEAAALRALEVFTVAHLEA----AAAMDEGGKEGLSRE--AAMIGAAECLLEDLKEVLGRIPKFFGEEHKARHLIRGQYDAHLMRQVAGLHRHGLSDVEIGDLFEINRFLLKYQREVVLLGAEAPSAEVKVAAQACLQECLVKTRQQMGRWYEAILGRRSEVLFDADGRPFTANPEDLFQIVHTQVRVAMD--AGGFVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLSVSGLCAVVNDYDRLYDKAAELRDELLGREKLSQEKHYTLIDNVMDLLSDEQVRVSFEATRMIAFQVMKDATGSLLEFSPFDVDGGVVVGGREIGDGRKQQRQQPQLLLSRVDA-LEDARLTIKDYFSDLEAWLPGYFFAHVVKSCYESLVNLYLVSILRGRTVWG-------------DVEVVAHRMRQDKQTLLSYFGQEQGLAQALEEVGVGEP---ELVFGAWDAIREVVLNGDGLRNERTAALLMVLPPPWNVDAVLQIRALRGEEVGDRKARQEARQKLADWYRAELQPIVQGAALAGSRKGREEVKEGEKTALVVGRELAWRFQTSPMSVRREQVLVLVG 1213
            +L+  L E+     L  R   L+ LL+ +P  L +++ + + LE WR E+L +L ++                 GS          G  G      +   +   F   +E V  L D I++ +  ++S+ F +    PR+L   L +V +H  F K+K   AR++ E+  ++ ++  + L  +ED   ++   LK+    RA  +F     EA    A+    G    +  +  AA +GAA  +L DL  +   +   F +++      R QY+  L++++  L++ G S ++ G+L ++  +L  Y + +V LGA  P +E   A   CLQE LV+ R QM  W+  IL R  EV  ++ G+P T+ PED F I+H QV VA+   +   +                                             +++  +CA VNDYDRL +K  E R+EL    KLS+E H  ++D  +D + D  V ++ EA       V++D   +  E               E+     +           VD  ++   +T  DY+SDL  WLP ++FA +VK C E ++ LYL  + R     G             D  VVA ++R D++ +  +F   +   + L   G+ EP   EL     D I ++   G  L  + T ALL     PW VDA+L I  LRG++    K   + +++L       ++P ++G   AG + G          A    R  + RF  SP     +   +++G
Sbjct:  153 NLERTLKEVTYYANLPARVDHLVGLLEKQPMQLRQVHLEGQQLELWRDELLRELKVQ----------------QGSKTMAPPPSKSGIGGPSRVVSVGDRMQATFGIHLEEVKKLLDAIRKKIFDNISNCFEIVQLDPRILTSTLEIVDMHAAFQKQKATRARERAEK-NSEDVEEAVALSLLEDLRADLMSKLKQRVDDRASVMFAQTQAEAIAKEASVTTAGDASHVQPDVFAATLGAATRILVDLNYLKAEVAPCFPDDYMVMDTFRMQYERCLVKEICKLYQGGFSKLDQGELLQLMEWLDYYNQAIVHLGARTPCSEFVQALSICLQEYLVRVRIQMTEWFTNILNRVQEVAVNSAGQPITSTPEDFFNIIHLQVLVALSKLSADNMCAVIVVCLNVIKTILEETLTTLRDKKLELAFPPTMAKERQREGDPVTLEMMCATVNDYDRLQEKIQEFREELGLMGKLSEE-HLVMVDAAVDHVLDGFVSIADEANSGCTQLVLEDVREAFAE---------------ELFTAEWE---------DSVDVMMQKVAMTFHDYYSDLSVWLPPFYFARLVKECLEKVMALYLFFLFRRGGAKGKDEKAVVKSRPFADPLVVAQKLRNDREAMAIFFDDYE---EQLRIAGLREPAALELQLAVLDHIVDLFEGGVTLETDATDALLREF-GPWGVDALLAISFLRGDK---DKTGLDLKERLKRHCARTIRPTLRG---AGGQAGLSNFT--YDGAAEAPRNFSARFSLSPFDSEVDAEAIVIG 883          
BLAST of NO12G01100 vs. NCBI_GenBank
Match: XP_009035615.1 (hypothetical protein AURANDRAFT_63220 [Aureococcus anophagefferens] >EGB09560.1 hypothetical protein AURANDRAFT_63220 [Aureococcus anophagefferens])

HSP 1 Score: 71.6 bits (174), Expect = 1.900e-8
Identity = 154/710 (21.69%), Postives = 255/710 (35.92%), Query Frame = 0
Query:  478 LKTRPDALLKIYRKSEMLEKWRMEVLLDLGMEGREKEKEKRIERRLDGSGSAWENEEVIGGGTDGGIPSFHMEHSVSTIFADQMELVGSLTDRIKQTVMSHVSDAFRLSLT-TPRLLEQALTVVKLHRDFNKEKL-DVARQKMERAGTKSLDWVLRL----CGIEDWDGEVRLVLKEAAALRALEVFTVAHLEAAAAMDEGGKEGLSREAAMIGAAECLLEDLKEVLGRIPKFFGEEHKARHLIRGQYDAHLMRQVAGLHRHGLS-DVEIGDLFEINRFLLKYQ----------------------REVVLLGAEAPSAEVKVAAQACLQECLVKTRQQMGRWYEAILGRRSEVLFDADGRPFTANPEDLFQIVHTQVRVAMD-----------------------------------------------------------AGGFVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLSVSGLCAVVNDYDRLYDKAAELRDELLGREKLSQEKHYTLIDNVMDLLSDEQVRVSFEATRMIAFQVMKDATGSLLEFSPFDVDGGVVVGGREIGDGRKQQRQQPQLLLSRVDALEDARLTIKDYFSDLEAWLPGYFFAHVVKSCYESLVNLYLVSILRGR-TVWGDVEVVAHRMRQDKQTLLSYFGQEQGLAQALEEVGVGEPELVFGAWDAIREV 1099
            L+ RP  ++ +Y+++  LE WR      L    R+     R    L  S S +  EE+                 ++   A +   V  L   + +  ++ + D    S    P  +  A  VV+LH    +++L   A    E  G  + D + RL     G     G V   L +    RA   F  A +  A         G    AA++GA   L+ D +  +  +        +   + R   +AH+ RQ+  L     + D+E+ +LF+++ +L  Y                            L    P+     A    + E L +  +Q+  W+ AI  R++E   D  GR  T  PED+FQ++  QV VA+D                                                           A    XXXXXXXXXXXXX                                L V  LCA+ ND  R+ ++  EL + L  ++ ++     + +  V D +  +   ++ +A    A     D   ++  F+P D D   + G R   D  K             DA++ A  T+ DY  D  AWLP Y +A + +  ++  V  Y+ ++L  +   + D +  A  + +D+  +L+YF  +      L   G+ EP  V     A+R +
Sbjct:  272 LEERPRDVVVVYKRTMELELWRS----SLQRHVRQATDRARAADGLKRSTSDYGLEEL---------------GRLAAALAHRFAAVAGLVHDVFEFALAPLGDDVLASAADDPARVVAAARVVELHETLQRQRLRRDALADAEARGEDAADALDRLRHSPTGAPARAGAVAR-LYDGFRKRAATAFAEAQMSLA-------DRGHGATAALLGAGTRLILDTQACVDHLAPLLPPSWRCARVCRSALEAHVERQLGQLWSPARARDLEVEELFQVSEWLETYNAILSEIDPVADXXXXXXXXXXXXXXAPLRPRGPAKAFATAGAFLMGEYLDRIAKQVESWFVAIRARKAEPRADPAGRLVTTRPEDMFQVITMQVGVALDHAARDAPDPADEPASPGRPKGQHVATVVLRCLEELRHDAARSSERCRECVAAVERYVRSASRGXXXXXXXXXXXXXXGEAKAETRRSAYSRKGRKNSLGVPDDDAAPPSLEVERLCALANDALRVQERCEELVESLESKDAVTGAPLLS-VRAVTDQVVADYAELALDACAAAAAAPFVDLRDAI--FAP-DAD-RALFGPRWESDRTK------------ADAVDVALTTLDDYLRDYRAWLPAYLYAKLARRAFDLFVEAYVYALLDAKPKPFADGDGAAMLLLRDQNHVLAYFLPKFTEDPDLASAGLREPGRVVAETAALRHL 937          
BLAST of NO12G01100 vs. NCBI_GenBank
Match: XP_024573907.1 (hypothetical protein PPTG_08805 [Plasmopara halstedii] >CEG37538.1 hypothetical protein PPTG_08805 [Plasmopara halstedii])

HSP 1 Score: 68.6 bits (166), Expect = 1.600e-7
Identity = 81/405 (20.00%), Postives = 150/405 (37.04%), Query Frame = 0
Query:  668 AMDEGGKEGLSREAAMIGAAECLLEDLKEVLGRIPKFFGEEHKARHLIRGQYDAHLMRQVAGLHRHGLSDVEIGDLFEINRFLLKYQREVVLLGAEAPSAEVKVAAQACLQECLVKTRQQMGRWYEAILGRRSEVLFDADGRPFTANPEDLFQIVHTQVRVAMD--AGGFVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLSVSGLCAVVNDYDRLYDKAAELRDELLGREKLSQEKHY--TLIDNVMDLLSDEQVRVSFEATRMIAFQVMKDATGSLLEFSPFDVDGGVVVGGREIGDGRKQQRQQPQLLLSRVDALEDARLTIKDYFSDLEAWLPG-YFFAHVVKSCYESLVNLYLVSILRGRTVWGDVEVVAHRMRQDKQTLLSYF 1068
            A +E  K      +++  AA  L+ DL+ V   +   F  +    HL    Y+A L   +  L     +DV I    +I +++  Y  E++       S  +   AQ  +   L + + Q+  W   I  R  E +    G   +  P D+  I+ +Q+ +A +  +G  +                                             +    LC+ +ND + L  K  +L +E+   E  S+EK    T + + +D  S E V  +  A  +I  ++          F   + D   +   ++  +G                 +E    T+ DY+SDL+ W+ G +FF+ VV+ C    V  Y    L+    + D+   A+ + +D  + + +F
Sbjct:  288 AENEAKKNKKDVFSSIFEAATQLMLDLEIVQSEVAPCFPTDIDIIHLFTSTYNAQLDSVITRLTER--ADVGIAQRLQIVQWIDYYNSEIIKYKHSRASVVLDRTAQELMTAYLEEIKAQIHSWITNIWKREEECVVGTQGELQSTRPNDIVNILKSQISIAQEWLSGRLIGCVVTTCLQVLMEELKTRYEAIASKLEI-----------------VDTEMLCSFINDAEILQAKCPDLVEEISFAETDSEEKEAFDTFVGDSLDSTSTEIVVFASNACDLIVSKI----------FHEVEQDTFKLWWSKKWDEG--------------APVVESLLATLDDYYSDLKKWIFGSFFFSKVVRQCLNRCVKEYGAKFLQRTVPFSDLVKSANSVDKDMHSFVDFF 649          
BLAST of NO12G01100 vs. NCBI_GenBank
Match: ETI52346.1 (hypothetical protein F443_04485 [Phytophthora parasitica P1569] >ETI52347.1 hypothetical protein, variant 1 [Phytophthora parasitica P1569])

HSP 1 Score: 66.2 bits (160), Expect = 7.800e-7
Identity = 80/394 (20.30%), Postives = 143/394 (36.29%), Query Frame = 0
Query:  683 MIGAAECLLEDLKEVLGRIPKFFGEEHKARHLIRGQYDAHLMRQVAGLHRHGLSDVEIGDLFEINRFLLKYQREVVLLGAEAPSAEVKVAAQACLQECLVKTRQQMGRWYEAILGRRSEVLFDADGRPFTANPEDLFQIVHTQVRVAMD--AGGFVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLSVSGLCAVVNDYDRLYDKAAELRDELLGREKLSQEKHY--TLIDNVMDLLSDEQVRVSFEATRMIAFQVMKDA--TGSLLEFSPFDVDGGVVVGGREIGDGRKQQRQQPQLLLSRVDALEDARLTIKDYFSDLEAWLPG-YFFAHVVKSCYESLVNLYLVSILRGRTVWGDVEVVAHRMRQDKQTLLSYFGQ 1070
            ++ AA  L+ DL+ V   +   F  E    HL    Y+A L  ++  L     SDV I    +I +++  Y  E++       S  +   +Q  ++  L + + Q+  W   I  R  E +    G   +  P D+  I+ +Q+ +A +  +G  V                                             +    LC+ +ND + L  K  EL +E+   E  S+EK    T + + +D  S + V  +  A  +I  ++  +     + L FS    +G  VV                          E    T+ DY+ DL+ W+ G +FF+ VV+ C    V  Y   +++    +      A  +  D    + +F +
Sbjct:  305 VLEAATQLMVDLEIVQSDVAPCFPSEIDVVHLFTSTYNAQLDNEITKLSER--SDVGIAQRLQIVQWIDYYNTEIIKYKHSRASIVLDRTSQELMEGYLDEIKVQIHTWITNIWKRDEECVVGPQGELQSTRPNDIVNILKSQISIAQEWLSGRLV-----------------GCVVATCLQVLMEELKIRYDSIAGKLETVDAEMLCSFINDAEILQAKCPELVEEISFAETDSEEKEAFDTFMGDSLDTTSTDIVAFATNACDLIVSKIFHEVEQDTTKLWFSKKWDEGAPVV--------------------------ETLLATLDDYYPDLKKWIFGSFFFSKVVRQCLNRCVKEYCARLIQRTHSFSTPASTAATVDNDLHNFVQFFNK 653          
BLAST of NO12G01100 vs. NCBI_GenBank
Match: ETI52348.1 (hypothetical protein, variant 2 [Phytophthora parasitica P1569] >ETI52349.1 hypothetical protein, variant 3 [Phytophthora parasitica P1569])

HSP 1 Score: 66.2 bits (160), Expect = 7.800e-7
Identity = 80/394 (20.30%), Postives = 143/394 (36.29%), Query Frame = 0
Query:  683 MIGAAECLLEDLKEVLGRIPKFFGEEHKARHLIRGQYDAHLMRQVAGLHRHGLSDVEIGDLFEINRFLLKYQREVVLLGAEAPSAEVKVAAQACLQECLVKTRQQMGRWYEAILGRRSEVLFDADGRPFTANPEDLFQIVHTQVRVAMD--AGGFVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLSVSGLCAVVNDYDRLYDKAAELRDELLGREKLSQEKHY--TLIDNVMDLLSDEQVRVSFEATRMIAFQVMKDA--TGSLLEFSPFDVDGGVVVGGREIGDGRKQQRQQPQLLLSRVDALEDARLTIKDYFSDLEAWLPG-YFFAHVVKSCYESLVNLYLVSILRGRTVWGDVEVVAHRMRQDKQTLLSYFGQ 1070
            ++ AA  L+ DL+ V   +   F  E    HL    Y+A L  ++  L     SDV I    +I +++  Y  E++       S  +   +Q  ++  L + + Q+  W   I  R  E +    G   +  P D+  I+ +Q+ +A +  +G  V                                             +    LC+ +ND + L  K  EL +E+   E  S+EK    T + + +D  S + V  +  A  +I  ++  +     + L FS    +G  VV                          E    T+ DY+ DL+ W+ G +FF+ VV+ C    V  Y   +++    +      A  +  D    + +F +
Sbjct:  275 VLEAATQLMVDLEIVQSDVAPCFPSEIDVVHLFTSTYNAQLDNEITKLSER--SDVGIAQRLQIVQWIDYYNTEIIKYKHSRASIVLDRTSQELMEGYLDEIKVQIHTWITNIWKRDEECVVGPQGELQSTRPNDIVNILKSQISIAQEWLSGRLV-----------------GCVVATCLQVLMEELKIRYDSIAGKLETVDAEMLCSFINDAEILQAKCPELVEEISFAETDSEEKEAFDTFMGDSLDTTSTDIVAFATNACDLIVSKIFHEVEQDTTKLWFSKKWDEGAPVV--------------------------ETLLATLDDYYPDLKKWIFGSFFFSKVVRQCLNRCVKEYCARLIQRTHSFSTPASTAATVDNDLHNFVQFFNK 623          
BLAST of NO12G01100 vs. NCBI_GenBank
Match: ETK92236.1 (hypothetical protein L915_04357 [Phytophthora parasitica] >ETK92237.1 hypothetical protein, variant 1 [Phytophthora parasitica])

HSP 1 Score: 66.2 bits (160), Expect = 7.800e-7
Identity = 80/394 (20.30%), Postives = 143/394 (36.29%), Query Frame = 0
Query:  683 MIGAAECLLEDLKEVLGRIPKFFGEEHKARHLIRGQYDAHLMRQVAGLHRHGLSDVEIGDLFEINRFLLKYQREVVLLGAEAPSAEVKVAAQACLQECLVKTRQQMGRWYEAILGRRSEVLFDADGRPFTANPEDLFQIVHTQVRVAMD--AGGFVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLSVSGLCAVVNDYDRLYDKAAELRDELLGREKLSQEKHY--TLIDNVMDLLSDEQVRVSFEATRMIAFQVMKDA--TGSLLEFSPFDVDGGVVVGGREIGDGRKQQRQQPQLLLSRVDALEDARLTIKDYFSDLEAWLPG-YFFAHVVKSCYESLVNLYLVSILRGRTVWGDVEVVAHRMRQDKQTLLSYFGQ 1070
            ++ AA  L+ DL+ V   +   F  E    HL    Y+A L  ++  L     SDV I    +I +++  Y  E++       S  +   +Q  ++  L + + Q+  W   I  R  E +    G   +  P D+  I+ +Q+ +A +  +G  V                                             +    LC+ +ND + L  K  EL +E+   E  S+EK    T + + +D  S + V  +  A  +I  ++  +     + L FS    +G  VV                          E    T+ DY+ DL+ W+ G +FF+ VV+ C    V  Y   +++    +      A  +  D    + +F +
Sbjct:  305 VLEAATQLMVDLEIVQSDVAPCFPSEIDVVHLFTSTYNAQLDNEITKLSER--SDVGIAQRLQIVQWIDYYNTEIIKYKHSRASIVLDRTSQELMEGYLDEIKVQIHTWITNIWKRDEECVVGPQGELQSTRPNDIVNILKSQISIAQEWLSGRLV-----------------GCVVATCLQVLMEELKIRYDSIAGKLETVDAEMLCSFINDAEILQAKCPELVEEISFAETDSEEKEAFDTFMGDSLDTTSTDIVAFATNACDLIVSKIFHEVEQDTTKLWFSKKWDEGAPVV--------------------------ETLLATLDDYYPDLKKWIFGSFFFSKVVRQCLNRCVKEYCARLIQRTHSFSTPASTAATVDNDLHNFVQFFNK 653          
BLAST of NO12G01100 vs. NCBI_GenBank
Match: ETK92238.1 (hypothetical protein, variant 2 [Phytophthora parasitica] >ETK92239.1 hypothetical protein, variant 3 [Phytophthora parasitica])

HSP 1 Score: 66.2 bits (160), Expect = 7.800e-7
Identity = 80/394 (20.30%), Postives = 143/394 (36.29%), Query Frame = 0
Query:  683 MIGAAECLLEDLKEVLGRIPKFFGEEHKARHLIRGQYDAHLMRQVAGLHRHGLSDVEIGDLFEINRFLLKYQREVVLLGAEAPSAEVKVAAQACLQECLVKTRQQMGRWYEAILGRRSEVLFDADGRPFTANPEDLFQIVHTQVRVAMD--AGGFVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLSVSGLCAVVNDYDRLYDKAAELRDELLGREKLSQEKHY--TLIDNVMDLLSDEQVRVSFEATRMIAFQVMKDA--TGSLLEFSPFDVDGGVVVGGREIGDGRKQQRQQPQLLLSRVDALEDARLTIKDYFSDLEAWLPG-YFFAHVVKSCYESLVNLYLVSILRGRTVWGDVEVVAHRMRQDKQTLLSYFGQ 1070
            ++ AA  L+ DL+ V   +   F  E    HL    Y+A L  ++  L     SDV I    +I +++  Y  E++       S  +   +Q  ++  L + + Q+  W   I  R  E +    G   +  P D+  I+ +Q+ +A +  +G  V                                             +    LC+ +ND + L  K  EL +E+   E  S+EK    T + + +D  S + V  +  A  +I  ++  +     + L FS    +G  VV                          E    T+ DY+ DL+ W+ G +FF+ VV+ C    V  Y   +++    +      A  +  D    + +F +
Sbjct:  275 VLEAATQLMVDLEIVQSDVAPCFPSEIDVVHLFTSTYNAQLDNEITKLSER--SDVGIAQRLQIVQWIDYYNTEIIKYKHSRASIVLDRTSQELMEGYLDEIKVQIHTWITNIWKRDEECVVGPQGELQSTRPNDIVNILKSQISIAQEWLSGRLV-----------------GCVVATCLQVLMEELKIRYDSIAGKLETVDAEMLCSFINDAEILQAKCPELVEEISFAETDSEEKEAFDTFMGDSLDTTSTDIVAFATNACDLIVSKIFHEVEQDTTKLWFSKKWDEGAPVV--------------------------ETLLATLDDYYPDLKKWIFGSFFFSKVVRQCLNRCVKEYCARLIQRTHSFSTPASTAATVDNDLHNFVQFFNK 623          
BLAST of NO12G01100 vs. NCBI_GenBank
Match: ETL98789.1 (hypothetical protein, variant 1 [Phytophthora parasitica] >ETL98790.1 hypothetical protein, variant 2 [Phytophthora parasitica] >ETM51954.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETM51955.1 hypothetical protein, variant 2 [Phytophthora parasitica] >ETP50053.1 hypothetical protein, variant 1 [Phytophthora parasitica P10297] >ETP50054.1 hypothetical protein, variant 2 [Phytophthora parasitica P10297])

HSP 1 Score: 66.2 bits (160), Expect = 7.800e-7
Identity = 80/394 (20.30%), Postives = 143/394 (36.29%), Query Frame = 0
Query:  683 MIGAAECLLEDLKEVLGRIPKFFGEEHKARHLIRGQYDAHLMRQVAGLHRHGLSDVEIGDLFEINRFLLKYQREVVLLGAEAPSAEVKVAAQACLQECLVKTRQQMGRWYEAILGRRSEVLFDADGRPFTANPEDLFQIVHTQVRVAMD--AGGFVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLSVSGLCAVVNDYDRLYDKAAELRDELLGREKLSQEKHY--TLIDNVMDLLSDEQVRVSFEATRMIAFQVMKDA--TGSLLEFSPFDVDGGVVVGGREIGDGRKQQRQQPQLLLSRVDALEDARLTIKDYFSDLEAWLPG-YFFAHVVKSCYESLVNLYLVSILRGRTVWGDVEVVAHRMRQDKQTLLSYFGQ 1070
            ++ AA  L+ DL+ V   +   F  E    HL    Y+A L  ++  L     SDV I    +I +++  Y  E++       S  +   +Q  ++  L + + Q+  W   I  R  E +    G   +  P D+  I+ +Q+ +A +  +G  V                                             +    LC+ +ND + L  K  EL +E+   E  S+EK    T + + +D  S + V  +  A  +I  ++  +     + L FS    +G  VV                          E    T+ DY+ DL+ W+ G +FF+ VV+ C    V  Y   +++    +      A  +  D    + +F +
Sbjct:  305 VLEAATQLMVDLEIVQSDVAPCFPSEIDVVHLFTSTYNAQLDNEITKLSER--SDVGIAQRLQIVQWIDYYNTEIIKYKHSRASIVLDRTSQELMEGYLDEIKVQIHTWITNIWKRDEECVVGPQGELQSTRPNDIVNILKSQISIAQEWLSGRLV-----------------GCVVATCLQVLMEELKIRYDSIAGKLETVDAEMLCSFINDAEILQAKCPELVEEISFAETDSEEKEAFDTFMGDSLDTTSTDIVAFATNACDLIVSKIFHEVEQDTTKLWFSKKWDEGAPVV--------------------------ETLLATLDDYYPDLKKWIFGSFFFSKVVRQCLNRCVKEYCARLIQRTHSFSTPASTAATVDNDLHNFVQFFNK 653          
BLAST of NO12G01100 vs. NCBI_GenBank
Match: ETL98791.1 (hypothetical protein, variant 3 [Phytophthora parasitica] >ETL98792.1 hypothetical protein, variant 4 [Phytophthora parasitica] >ETM51956.1 hypothetical protein, variant 3 [Phytophthora parasitica] >ETM51957.1 hypothetical protein, variant 4 [Phytophthora parasitica] >ETP50055.1 hypothetical protein, variant 3 [Phytophthora parasitica P10297] >ETP50056.1 hypothetical protein, variant 4 [Phytophthora parasitica P10297])

HSP 1 Score: 66.2 bits (160), Expect = 7.800e-7
Identity = 80/394 (20.30%), Postives = 143/394 (36.29%), Query Frame = 0
Query:  683 MIGAAECLLEDLKEVLGRIPKFFGEEHKARHLIRGQYDAHLMRQVAGLHRHGLSDVEIGDLFEINRFLLKYQREVVLLGAEAPSAEVKVAAQACLQECLVKTRQQMGRWYEAILGRRSEVLFDADGRPFTANPEDLFQIVHTQVRVAMD--AGGFVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLSVSGLCAVVNDYDRLYDKAAELRDELLGREKLSQEKHY--TLIDNVMDLLSDEQVRVSFEATRMIAFQVMKDA--TGSLLEFSPFDVDGGVVVGGREIGDGRKQQRQQPQLLLSRVDALEDARLTIKDYFSDLEAWLPG-YFFAHVVKSCYESLVNLYLVSILRGRTVWGDVEVVAHRMRQDKQTLLSYFGQ 1070
            ++ AA  L+ DL+ V   +   F  E    HL    Y+A L  ++  L     SDV I    +I +++  Y  E++       S  +   +Q  ++  L + + Q+  W   I  R  E +    G   +  P D+  I+ +Q+ +A +  +G  V                                             +    LC+ +ND + L  K  EL +E+   E  S+EK    T + + +D  S + V  +  A  +I  ++  +     + L FS    +G  VV                          E    T+ DY+ DL+ W+ G +FF+ VV+ C    V  Y   +++    +      A  +  D    + +F +
Sbjct:  275 VLEAATQLMVDLEIVQSDVAPCFPSEIDVVHLFTSTYNAQLDNEITKLSER--SDVGIAQRLQIVQWIDYYNTEIIKYKHSRASIVLDRTSQELMEGYLDEIKVQIHTWITNIWKRDEECVVGPQGELQSTRPNDIVNILKSQISIAQEWLSGRLV-----------------GCVVATCLQVLMEELKIRYDSIAGKLETVDAEMLCSFINDAEILQAKCPELVEEISFAETDSEEKEAFDTFMGDSLDTTSTDIVAFATNACDLIVSKIFHEVEQDTTKLWFSKKWDEGAPVV--------------------------ETLLATLDDYYPDLKKWIFGSFFFSKVVRQCLNRCVKEYCARLIQRTHSFSTPASTAATVDNDLHNFVQFFNK 623          
The following BLAST results are available for this feature:
BLAST of NO12G01100 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 12
Match NameE-valueIdentityDescription
EWM25893.13.400e-24445.05hypothetical protein Naga_100048g6 [Nannochloropsi... [more]
EWM24972.12.600e-5525.99Exocyst complex component Sec6 [Nannochloropsis ga... [more]
XP_009035615.11.900e-821.69hypothetical protein AURANDRAFT_63220 [Aureococcus... [more]
XP_024573907.11.600e-720.00hypothetical protein PPTG_08805 [Plasmopara halste... [more]
ETI52346.17.800e-720.30hypothetical protein F443_04485 [Phytophthora para... [more]
ETI52348.17.800e-720.30hypothetical protein, variant 2 [Phytophthora para... [more]
ETK92236.17.800e-720.30hypothetical protein L915_04357 [Phytophthora para... [more]
ETK92238.17.800e-720.30hypothetical protein, variant 2 [Phytophthora para... [more]
ETL98789.17.800e-720.30hypothetical protein, variant 1 [Phytophthora para... [more]
ETL98791.17.800e-720.30hypothetical protein, variant 3 [Phytophthora para... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL124nonsL124Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR014ncniR014Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR006ngnoR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010024NSK010024Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO12G01100.1NO12G01100.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|671375gene_5265Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100048g6gene4607Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO12G01100.1NO12G01100.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO12G01100 ID=NO12G01100|Name=NO12G01100|organism=Nannochloropsis oceanica|type=gene|length=4211bp
ATGTGGAGATgtgagtgtaagggctcgggtataagggatcgtggggatgt
agtatgaatgcggcagatgaaaattgcaagctctgcgttatattttcggg
cgaaaggactgctaatcggatgcagaacagcccattcagcgctactgata
taccgcaatttgagcttattcccctttctgtcaaaaaatatcgctcccac
accttatagGCACAGCTGACATACGCCGAGCATCTGAATCGGTAGCATTC
AGGGTTGACGGGGGCCCTACAAGACGGGAAGGAGAGGGTGAGAGGGAGAT
GGAGGAGGCCGGTGATACGTCGACGCTGGCCATGGTGGCGTCCATCGTTG
AAACGCCTCCCTCCAAACACAAGGCATTCAACCCCACCACGAAGAAGGTT
TCATGCCCGCAGCATGAAGATGTGGTTATCGCCCGGCACAAGCTGCGGAC
GGGTGTCATCTCTATTCCTTGCTGGCGGTGCATTGGAGAGATAGCGCTTC
GTTTCGAGGAAGGGGAAACAGCAGCCGAGGCCCGTGTGCACTACTTGCAC
GAGGCCTTGCAATCGGAGAGGGAACGTGCCGTGGTGCTCGAACGACGGGC
CGTCACTTTGGAAGAAGAGCAGGATGGCCTCCGAGACCAAATAGCTCGGC
TCGTGGAGCAAGTGGCGGGCTTATCGGAAGAGCTCTCGCATGTCATAACC
ATGAACAAGCGCTTGGAATTACATCTAGCAAGTAATCGACCTGCTTCCTG
CTTCACACCCATTTCGCCTCATTCATCCCTTTTTTCCTCCTCAGCGAATG
TGGCAGTGCCAGTACCAATGGCAGAGTTCCCCCCAGTGGGAGCAGAAGCA
GCAGTAGAGGCACCAGCAGCAGAGACATACCCTGGGTCACGACCACCCAC
TCCTAGGCAACCAGCAGCAATGGCAGCACTTGTGAAGTCTGCAGGGGCTG
TAGGCAACGAAAGCCGCAATACAAATCCCTCTTCATCCACCTTCTCGCCT
TTTTCCTCCACGGGCGTGTTATCGCCGGGCATGATTCTCAAGGCCGAAGg
tggggaggcaggatcatccctttcttcaggcgtgaagagagttggtgacg
acaagtattccttttcaccgtcagagACACCTCCGACGTCGGCCACGAGC
GGCGACAACAGCAGCAGCCGAGCAGAAGCAGTACCAAAGGCGACAACAGC
AACATCGCCAGCGACATCAACAGGATTACAAACATCAGTGTTGGGATCAC
CAGCAGCAGCAGCGGCGGCGGCGGCGGCAGCGGCAGCAGCAGCGGCAGCA
GTTACTTCTCGCAGTACTTCAAGCATGGGTTCTCGAGAGGAGGAAGGAGG
GGGGGAGGAAGGGGGGAAGGGACGCTTCGGCCTGAGTCGCCCATGCCCCA
AGCGTTGGGCGCTGGAGGGAGAGAGCGAGGGGTGAAGGGCGAGGTCAAGA
GTGAACAAGGTGTGCAGGGATGGGAGCAGCAGCAACAGCAGCAGCAGCAG
GGACAAGAGGAGGAGAGGCAGCAGAAGAAGAGAAACAGGAAGAAACGAAA
GAGAAAGTGGTCTCTCTTTGGCCGTAAACGAAGATCCTCTTTCAAGTCCC
TCCCTCCTTCCCTCCCTCCCCGCCCTTCCTCTTCTGCATCCGACCTTGAC
AACGAGCTAGATGAAATCTTGTCCGTTGACGTGCTGGCGAAGCGTTTGAT
TCAGCTGCTCAAGACACGACCAGATGCCCTTCTAAAGATATACCGAAAAT
CTGAGATGTTGGAAAAATGGCGAATGGAGGTCCTACTGGACCTGGGGATG
GAAGGGAGGGAGAAGGAAAAGGAAAAGCGGATTGAGAGACGGTTGGATGG
CAGTGGTAGCGCCTGGGAGAATGAGGAAGTGATAGGGGGGGGGACGGACG
GGGGAATCCCTTCTTTTCATATGGAGCACAGTGTCAGTACAATTTTCGCG
GACCAGATGGAGCTGGTGGGGTCATTGACCGATCGTATCAAGCAGACTGT
AATGAGCCATGTTTCAGACGCTTTCCGCCTTTCTCTCACCACGCCCCGGC
TGTTGGAGCAAGCCCTCACAGTGGTGAAGCTGCACAGGGACTTCAACAAG
GAGAAGCTGGACGTGGCTCGACAAAAAATGGAGCGGGCGGGAACTAAGAG
CCTAGATTGGGTTTTACGTTTGTGTGGGATCGAGGACTGGGACGGCGAGG
TGAGGTTGGTCTTGAAGGAAGCTGCGGCCTTGAGAGCGCTGGAAGTGTTT
ACGGTGGCCCATTTAGAGGCAGCGGCTGCCATGGACGAGGGAGGGAAGGA
AGGGTTGAGTAGGGAGGCGGCAATGATTGGCGCGGCGGAATGCTTGCTGG
AGGATTTGAAGGAGGTGCTGGGTAGGATTCCCAAGTTTTTTGGGGAGGAA
CACAAAGCACGTCACTTGATTCGAGGGCAGTATGACGCGCATTTGATGAG
GCAGGTGGCGGGGCTGCACAGGCATGGATTGAGTGACGTGGAGATAGGCG
ATTTGTTTGAGATCAACCGTTTCTTATTGAAGTACCAGAGAGAAGTCGTG
TTGCTGGGCGCAGAGGCACCGAGTGCAGAGGTGAAAGTGGCAGCTCAGGC
GTGCTTGCAGGAATGTCTGGTCAAGACGCGCCAGCAGATGGGGAGATGGT
ATGAAGCGATTTTGGGGAGGAGGAGCGAGGTGCTGTTCGATGCGGACGGA
AGACCGTTTACGGCTAATCCGGAAGACTTGTTTCAGATCGTGCACACCCA
Ggtacgaagaagggggggaaggagggaaggaggaaggtagaggaggggca
tttcgccggtcatagtgaaagtcaaggtcttcgattgaaagcataaggga
ggatccagctcaccctcgtccttctttcctttctctcccctttcctcata
ccagGTGCGGGTCGCGATGGACGCCGGCGGTTTCGTTGATGATGACCTAT
GCGCGCTCCTCCTCGTCATTCTCACGGCCCTCAAAGAATATGTCGCGGAG
CACCACAACAGTCTGCTGGCACAGCAGCAGCTGCTGCTGCAGCAGAAGGA
GCAACAGCAGTTGCAGGAGCAGTTATCAGTATCAGGTTTGTGTGCTGTCG
TCAACGATTACGACCGTTTATATGACAAGGCCGCCGAGTTGAGGGATGAA
TTGTTGGGGAGGGAAAAGCTGTCCCAGGAGAAGCATTATACGCTGATCGA
TAACGTCATGGATCTGTTGAGCGATGAGCAGGTAAGGGTAAGTTTCGAAG
CGACGAGGATGATTGCCTTTCAGGTCATGAAGGACGCCACCGGGAGCTTG
CTTGAGTTTTCGCCGTTTGATGTGGACGGCGGTGTTGTGGTGGGAGGAAG
AGAAATTGGAGgtgggggggggtcccctgggtggtagggggaggaggcgg
tggtagtattggcagcagcgacagcagccacattagtaccagtggcagcg
atgggagtagtgcgctccataccgctgtcttcttagATGGAAGGAAGCAG
CAGCGGCAGCAGCCGCAGCTGTTGCTGAGTAGAGTTGATGCATTGGAAGA
CGCGCGGTTGACGATTAAGGACTACTTTTCTGATTTGGAGGCGTGGCTAC
CCGGGTATTTTTTCGCGCATGTCGTCAAGAGTTGTTATGAGTCGTTGGTG
AACCTGTACTTGGTCTCAATTTTGAGAGGGAGGACTGTATGGGGGGATGT
GGAGGTGGTCGCGCACCGGATGAGGCAGGATAAGCAGACGTTGTTGAGTT
ATTTTGGGCAGGAGCAGGGGTTGGCCCAAGCGTTAGAGGAGGTTGGAGTG
GGGGAGCCCGAGTTGGTTTTTGGGGCATGGGATGCGATAAGGGAGGTGGT
CCTTAATGGGGACGGATTGAGGAATGAAAGGACGGCGGCTCTGTTGATGG
TGTTGCCACCACCGTGGAATGTGGATGCGGTGTTGCAGATAAGGGCGTTG
AGGGGTGAGGAGGTGGGTGACCGGAAAGCGAGGCAGGAAGCGAGGCAAAA
ACTTGCGGATTGGTATAGGGCTGAGTTGCAGCCGATCGTGCAGGGGGCAG
CGTTGGCAGGGAGTAGGAAAGGTAGGGAGGAAGTGAAGGAGGGGGAGAAG
ACTGCCTTAGTTGTTGGTAGGGAGTTAGCATGGCGATTTCAGACGTCGCC
TATGTCGGTGAGGAGGGAGCAGGTACTGGTGTTAGTGGGGGAGAGTGTTT
ACAATGGGTGA
back to top

protein sequence of NO12G01100.1

>NO12G01100.1-protein ID=NO12G01100.1-protein|Name=NO12G01100.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1219bp
MWRCTADIRRASESVAFRVDGGPTRREGEGEREMEEAGDTSTLAMVASIV
ETPPSKHKAFNPTTKKVSCPQHEDVVIARHKLRTGVISIPCWRCIGEIAL
RFEEGETAAEARVHYLHEALQSERERAVVLERRAVTLEEEQDGLRDQIAR
LVEQVAGLSEELSHVITMNKRLELHLASNRPASCFTPISPHSSLFSSSAN
VAVPVPMAEFPPVGAEAAVEAPAAETYPGSRPPTPRQPAAMAALVKSAGA
VGNESRNTNPSSSTFSPFSSTGVLSPGMILKAEDTSDVGHERRQQQQPSR
SSTKGDNSNIASDINRITNISVGITSSSSGGGGGSGSSSGSSYFSQYFKH
GFSRGGRRGGGRGEGTLRPESPMPQALGAGGRERGVKGEVKSEQGVQGWE
QQQQQQQQGQEEERQQKKRNRKKRKRKWSLFGRKRRSSFKSLPPSLPPRP
SSSASDLDNELDEILSVDVLAKRLIQLLKTRPDALLKIYRKSEMLEKWRM
EVLLDLGMEGREKEKEKRIERRLDGSGSAWENEEVIGGGTDGGIPSFHME
HSVSTIFADQMELVGSLTDRIKQTVMSHVSDAFRLSLTTPRLLEQALTVV
KLHRDFNKEKLDVARQKMERAGTKSLDWVLRLCGIEDWDGEVRLVLKEAA
ALRALEVFTVAHLEAAAAMDEGGKEGLSREAAMIGAAECLLEDLKEVLGR
IPKFFGEEHKARHLIRGQYDAHLMRQVAGLHRHGLSDVEIGDLFEINRFL
LKYQREVVLLGAEAPSAEVKVAAQACLQECLVKTRQQMGRWYEAILGRRS
EVLFDADGRPFTANPEDLFQIVHTQVRVAMDAGGFVDDDLCALLLVILTA
LKEYVAEHHNSLLAQQQLLLQQKEQQQLQEQLSVSGLCAVVNDYDRLYDK
AAELRDELLGREKLSQEKHYTLIDNVMDLLSDEQVRVSFEATRMIAFQVM
KDATGSLLEFSPFDVDGGVVVGGREIGDGRKQQRQQPQLLLSRVDALEDA
RLTIKDYFSDLEAWLPGYFFAHVVKSCYESLVNLYLVSILRGRTVWGDVE
VVAHRMRQDKQTLLSYFGQEQGLAQALEEVGVGEPELVFGAWDAIREVVL
NGDGLRNERTAALLMVLPPPWNVDAVLQIRALRGEEVGDRKARQEARQKL
ADWYRAELQPIVQGAALAGSRKGREEVKEGEKTALVVGRELAWRFQTSPM
SVRREQVLVLVGESVYNG*
back to top
Synonyms
Publications