NO12G01090, NO12G01090 (gene) Nannochloropsis oceanica

Overview
NameNO12G01090
Unique NameNO12G01090
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1116
Alignment locationchr12:344839..345954 -

Link to JBrowse

Properties
Property NameValue
Descriptiontransferases;folic acid binding
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr12genomechr12:344839..345954 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0005542folic acid binding
GO:0016740transferase activity
GO:0005542folic acid binding
Vocabulary: INTERPRO
TermDefinition
IPR022384FormiminoTrfase_cat_dom_sf
IPR013802Formiminotransferase_C
IPR012886Formiminotransferase_N
Homology
BLAST of NO12G01090 vs. NCBI_GenBank
Match: CBN76612.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 223.0 bits (567), Expect = 1.200e-54
Identity = 124/278 (44.60%), Postives = 165/278 (59.35%), Query Frame = 0
Query:   20 CCKVYVSEGRNQVVLDRLAEVARTASPGLCALVQRFTDAVYHRSNFTLGGP-PGPVLEVALRVIDEALENLDMTLHSDATHPRVGAVDHVSFHPLGST-PLEAARNVAIVLGQRVGEKWPVPVLMYGACSS-RSLAEVRRSTSYFKGLALDSEIPHADFGPTRIDPKLGLLCCGAVPYVQNYNIRLNTSEKAVAARVTRAVRSKDGGPEGVEALTLRHDRGFMEVACNLLDLSKTGPEKVLEIVKEAARENGVEVEEAYTIGLTGQEILEETERLLRE 295
            C  VYVSEGRN  +LD LAE ART +PG   L+++F D  YHR+ FT+GG  P  V   ++ V   A+  +D+  H +A HPR+G VDHVS HPLG     E A+   + +   +G+   +PVL+YG  ++ R LAEVRRST YF G  L + I  AD GP  +D   G+   G  P V NYNI L+T +K +A++VTR++R KDGG   VE+LTL+   G  E ACNLL   +T    VL + +E A   G+ V + Y  GLT +E L    RL  E
Sbjct:   36 CAVVYVSEGRNSTLLDALAEAARTTAPGTAGLIRQFRDPQYHRTGFTIGGACPDAVARASVEVSRRAVRAIDLLEH-EAAHPRIGVVDHVSVHPLGGEGSQEIAQKAGLAIATALGKDVGLPVLLYGDLNNGRRLAEVRRSTPYFVGGELPATI-DADLGPNEVDASRGIATVGCTPLVTNYNILLSTDDKRLASKVTRSLREKDGGLPWVESLTLQRKDGTFEAACNLLRPKETTTANVLAVAEEQAAGVGIRVVDHYETGLTDEEALAAISRLSSE 311          
BLAST of NO12G01090 vs. NCBI_GenBank
Match: XP_004487323.1 (PREDICTED: formimidoyltransferase-cyclodeaminase-like isoform X1 [Cicer arietinum])

HSP 1 Score: 186.8 bits (473), Expect = 9.900e-44
Identity = 105/298 (35.23%), Postives = 157/298 (52.68%), Query Frame = 0
Query:   17 LLVCCKVYVSEGRNQVVLDRLAEVARTASPGLCALVQRFTDAVYHRSNFTL--------GGPPGPVLEVALRVIDEALENLDMTLHSDATHPRVGAVDHVSFHPLGSTPLEAARNVAIVLGQRVGEKWPVPVLMYGAC--SSRSLAEVRRSTSYFK---------GLALDSEIP-HADFGPTRIDPKLGLLCCGAVPYVQNYNIRLNTSEKAVAARVTRAVRSKDGGPEGVEALTLRHDRGFMEVACNLLDLSKTGPEKVLEIVKEAARENGVEVEEAYTIGLTGQEILEETERLLRE 295
            +L CCKVY+SE RN+  L+ +   A+     L  ++ +F D  Y+R  +TL           P  +    L ++  A EN+D  LHS  THPRVG VDH+ FHPL    L+ A   A  L   +G    VP  +YGA     R+L  +RR+  YFK         G+   + +P   D GP ++ P  G++  GA  +V NYN+ L TS  +V  R+ + +  + GG   V+A+ L H  G +EVACNLLD +K   E+V + V++ A+E G+ VE+ Y    +  EI++   ++L E
Sbjct:    5 ILGCCKVYISESRNKSALESIERAAKLFP--LAPIINKFEDVAYNRVGYTLVSELDSVSSAQPCHLTNAVLAMVKAAFENIDFELHS-GTHPRVGVVDHICFHPLVDASLDQAARTARCLATDMGSSLQVPTFLYGAAHEEGRTLDSIRRTFGYFKPNSSENQWIGVPKSNTLPLKPDSGPCQVTPTKGVVVIGATNWVDNYNVPLLTSNISVVRRMAKQISGRGGGLASVQAMALTHGEGVIEVACNLLDPNKVNGERVQQEVEKVAKEEGISVEKGYYTDFSQDEIVKSYLKILEE 299          
BLAST of NO12G01090 vs. NCBI_GenBank
Match: XP_012572038.1 (PREDICTED: QWRF motif-containing protein 4-like isoform X2 [Cicer arietinum])

HSP 1 Score: 186.8 bits (473), Expect = 9.900e-44
Identity = 105/298 (35.23%), Postives = 157/298 (52.68%), Query Frame = 0
Query:   17 LLVCCKVYVSEGRNQVVLDRLAEVARTASPGLCALVQRFTDAVYHRSNFTL--------GGPPGPVLEVALRVIDEALENLDMTLHSDATHPRVGAVDHVSFHPLGSTPLEAARNVAIVLGQRVGEKWPVPVLMYGAC--SSRSLAEVRRSTSYFK---------GLALDSEIP-HADFGPTRIDPKLGLLCCGAVPYVQNYNIRLNTSEKAVAARVTRAVRSKDGGPEGVEALTLRHDRGFMEVACNLLDLSKTGPEKVLEIVKEAARENGVEVEEAYTIGLTGQEILEETERLLRE 295
            +L CCKVY+SE RN+  L+ +   A+     L  ++ +F D  Y+R  +TL           P  +    L ++  A EN+D  LHS  THPRVG VDH+ FHPL    L+ A   A  L   +G    VP  +YGA     R+L  +RR+  YFK         G+   + +P   D GP ++ P  G++  GA  +V NYN+ L TS  +V  R+ + +  + GG   V+A+ L H  G +EVACNLLD +K   E+V + V++ A+E G+ VE+ Y    +  EI++   ++L E
Sbjct:  497 ILGCCKVYISESRNKSALESIERAAKLFP--LAPIINKFEDVAYNRVGYTLVSELDSVSSAQPCHLTNAVLAMVKAAFENIDFELHS-GTHPRVGVVDHICFHPLVDASLDQAARTARCLATDMGSSLQVPTFLYGAAHEEGRTLDSIRRTFGYFKPNSSENQWIGVPKSNTLPLKPDSGPCQVTPTKGVVVIGATNWVDNYNVPLLTSNISVVRRMAKQISGRGGGLASVQAMALTHGEGVIEVACNLLDPNKVNGERVQQEVEKVAKEEGISVEKGYYTDFSQDEIVKSYLKILEE 791          
BLAST of NO12G01090 vs. NCBI_GenBank
Match: XP_005648505.1 (Formiminotransferase [Coccomyxa subellipsoidea C-169] >EIE23961.1 Formiminotransferase [Coccomyxa subellipsoidea C-169])

HSP 1 Score: 185.3 bits (469), Expect = 2.900e-43
Identity = 114/292 (39.04%), Postives = 165/292 (56.51%), Query Frame = 0
Query:   21 CKVYVSEGRNQVVLDRLAEVARTASPGLCALVQRFTDAVYHRSNFTLGGP-PGPVLEVALRVIDEALENLDMTLHSDATHPRVGAVDHVSFHPLG-STPLEAARNVAIVLGQRVGE-KWPVPVLMYGACSS--RSLAEVRRSTSYFKGL-------ALDSEIP---HADFGPTRIDPKLGLLCCGAVPYVQNYNIRLNTSEKAVAARVTRAVRSKDGGPEGVEALTLRHDRG---FMEVACNLLDLSKTGPEKVLEIVKEAARENGVEVEEAYTIGLTGQEILEETERLLRE 295
            C VY+SEG    ++ +L   A     G  ALV  F D  Y+R+ FTL  P P  +    +R+   ALE +D+  H+ A+HPR+G VDH+S HPLG    L AA   A  +G ++GE +  VPV +YG+  S  RSLA++RR+  YFKG        A +  +P     DFGP+ +DP+ GL   GA+P+V N+NI L T +  +A ++ RAV  + GG   VEA+ L H+ G    +E+ACNLLD++ +  E V   V+E A  +G+ V   Y  G T +E+    E+ L +
Sbjct:    8 CNVYISEGLRSTLVQQLKVCADKCISG-SALVHTFVDKPYNRTGFTLVSPAPHELAGSVVRLARAALETIDLRSHA-ASHPRLGVVDHISCHPLGRDAALTAAAETARSIGTQLGEGELAVPVFLYGSAGSQQRSLADLRRACGYFKGSKQGAFKGASEISMPAGMRPDFGPSELDPRRGLATVGALPWVVNFNILLQTDDLQLARQIARAVSGRGGGLPSVEAMALPHEEGEILGIEIACNLLDVAVSPTEAVAASVQEHADRHGITVGRGYMTGKTPEELCSLAEQALAD 297          
BLAST of NO12G01090 vs. NCBI_GenBank
Match: XP_020227546.1 (formimidoyltransferase-cyclodeaminase-like [Cajanus cajan] >XP_020227547.1 formimidoyltransferase-cyclodeaminase-like [Cajanus cajan] >XP_020227548.1 formimidoyltransferase-cyclodeaminase-like [Cajanus cajan] >KYP56898.1 Formimidoyltransferase-cyclodeaminase [Cajanus cajan])

HSP 1 Score: 182.2 bits (461), Expect = 2.400e-42
Identity = 103/292 (35.27%), Postives = 155/292 (53.08%), Query Frame = 0
Query:   20 CCKVYVSEGRNQVVLDRLAEVARTASPGLCALVQRFTDAVYHRSNFTLG---GPPGP--VLEVALRVIDEALENLDMTLHSDATHPRVGAVDHVSFHPLGSTPLEAARNVAIVLGQRVGEKWPVPVLMYGAC--SSRSLAEVRRSTSYFK----------GLALDSEIPHADFGPTRIDPKLGLLCCGAVPYVQNYNIRLNTSEKAVAARVTRAVRSKDGGPEGVEALTLRHDRGFMEVACNLLDLSKTGPEKVLEIVKEAARENGVEVEEAYTIGLTGQEILEETERLLRE 295
            CCKVY+SE RN+  L+ +   ++     L  ++ +F D  Y+R  +TL    GP GP  +    L ++  A + +D  +HS  THPR+G VDH+ FHPL    L+ A  +A  L   +G    VP+ +YGA     R+L  +RR   YFK          GL  D      D GP+++    G++  GA  +V NYN+ L +S+ +V  R+ + V  + GG   V+A+ L H  G +EVACNLLD +K G E+V E V+  ARE G+ V + Y    +  +I+    +L +E
Sbjct:    8 CCKVYISESRNRSALESIERASKLYP--LAPIINKFQDVAYNRVGYTLVSQLGPSGPCHLANAVLAMVKAAFDTIDFEVHS-GTHPRLGVVDHICFHPLLGASLDQAATIARCLATDMGSSLQVPIYLYGAAHEEGRTLDSIRRIFGYFKPNSSENQWIGGLKSDCLPLSPDSGPSQVTSAKGVVVIGATNWVDNYNVPLLSSDISVVRRIAKRVSGRGGGLPSVQAMALAHGEGVIEVACNLLDPNKVGGERVQEEVESLAREQGISVGKGYYTDFSQDQIVSSYLKLFQE 296          
BLAST of NO12G01090 vs. NCBI_GenBank
Match: XP_004964370.1 (uncharacterized protein LOC101767576 [Setaria italica])

HSP 1 Score: 181.8 bits (460), Expect = 3.200e-42
Identity = 106/289 (36.68%), Postives = 150/289 (51.90%), Query Frame = 0
Query:   18 LVCCKVYVSEGRNQVVLDRLAEVARTASPGLCALVQRFTDAVYHRSNFTLGGP--------PGPVLEVALRVIDEALENLDMTLHSDATHPRVGAVDHVSFHPLGSTPLEAARNVAIVLGQRVGEKWPVPVLMYGAC--SSRSLAEVRRSTSYF---------KGLALDSEIPHA-DFGPTRIDPKLGLLCCGAVPYVQNYNIRLNTSEKAVAARVTRAVRSKDGGPEGVEALTLRHDRGFMEVACNLLDLSKTGPEKVLEIVKEAARENGVEVEEAYTIGLTGQEILE 287
            L CCK+Y+SE RN   L  +   A   SP    LV  F D  Y+R  +TL  P        P P+   A  V+  ALE +D   H+ A HPR+G VDH++FHPL    L+    +   +   +G+K  VP  +YGA     R+LA +RR   YF         +G    S +P A D GPT      G++  GA  +V NYN+ ++T++ A A  + RAV  + GG   V+A+ L H  G  EVACNLLD ++ G ++V E V++ A E G+ V E Y    + + I+E
Sbjct:   45 LACCKLYISEARNAPALRAIERAAAAQSPA-AVLVNAFADDAYNRVGYTLVAPLTGGGDPAPPPLHRAAFGVVAAALEAVDFGAHAGA-HPRLGVVDHIAFHPLAGARLDDVAALTRAVAADIGDKLQVPTYLYGAAHREGRTLASIRRQLGYFTPNSPGEQWRGSPDTSSLPVAPDAGPTTPTRSKGVVAIGATAWVDNYNVPVHTADVAAARLIARAVSERGGGLRSVQAMGLAHGEGVTEVACNLLDPARVGADQVQERVRQLAAEQGLAVGEGYFTDFSQERIVE 331          
BLAST of NO12G01090 vs. NCBI_GenBank
Match: XP_006431512.1 (uncharacterized protein LOC18041467 isoform X2 [Citrus clementina] >ESR44752.1 hypothetical protein CICLE_v10001997mg [Citrus clementina])

HSP 1 Score: 181.4 bits (459), Expect = 4.200e-42
Identity = 103/295 (34.92%), Postives = 156/295 (52.88%), Query Frame = 0
Query:   17 LLVCCKVYVSEGRNQVVLDRLAEVARTASPGLCALVQRFTDAVYHRSNFT----LGGPPG----PVLEVALRVIDEALENLDMTLHSDATHPRVGAVDHVSFHPLGSTPLEAARNVAIVLGQRVGEKWPVPVLMYGAC--SSRSLAEVRRSTSYFK----------GLALDSEIPHADFGPTRIDPKLGLLCCGAVPYVQNYNIRLNTSEKAVAARVTRAVRSKDGGPEGVEALTLRHDRGFMEVACNLLDLSKTGPEKVLEIVKEAARENGVEVEEAYTIGLTGQEILEETERL 292
            +L CCKVY+SE RN+  L+ + + A+  S    A+V +F D  Y+R  +T    L   P     P+      ++  A EN+D+ +HS  +HPR+G VDH+ FHPL S PL+    +A  L   +G    VP  +YGA     R+L  +RR+  YFK          GL  +S +   D GP ++    G++  G+  +V NYN+ + ++  A   R+ + V  + GG   V+A+ L H     EVACNLL+ SK G +KV   VK+ A E G+ V + Y   L+ +EI+E   +L
Sbjct:    5 MLACCKVYISESRNKAALESIEQAAKLFSE--AAIVNKFEDVTYNRVGYTVVSKLAPKPSSNSHPLKSTVFAMVKAAFENIDLDMHS-GSHPRLGVVDHICFHPLASAPLDQVAEIAKSLAGDIGSDLQVPTFLYGAAHEEGRTLDSIRRNLGYFKPNSAGNQWAGGLNSESLLVKPDRGPDQVTQSKGVIVIGSTRWVDNYNVPVFSTNIAAVRRIAKRVSERGGGLASVQAIALTHGEVITEVACNLLEPSKIGGDKVQLEVKKLAGEEGMAVGKGYYTDLSQKEIIERYMKL 296          
BLAST of NO12G01090 vs. NCBI_GenBank
Match: XP_024040535.1 (uncharacterized protein LOC18041467 isoform X1 [Citrus clementina] >XP_024040536.1 uncharacterized protein LOC18041467 isoform X1 [Citrus clementina] >XP_024040537.1 uncharacterized protein LOC18041467 isoform X1 [Citrus clementina])

HSP 1 Score: 181.4 bits (459), Expect = 4.200e-42
Identity = 103/295 (34.92%), Postives = 156/295 (52.88%), Query Frame = 0
Query:   17 LLVCCKVYVSEGRNQVVLDRLAEVARTASPGLCALVQRFTDAVYHRSNFT----LGGPPG----PVLEVALRVIDEALENLDMTLHSDATHPRVGAVDHVSFHPLGSTPLEAARNVAIVLGQRVGEKWPVPVLMYGAC--SSRSLAEVRRSTSYFK----------GLALDSEIPHADFGPTRIDPKLGLLCCGAVPYVQNYNIRLNTSEKAVAARVTRAVRSKDGGPEGVEALTLRHDRGFMEVACNLLDLSKTGPEKVLEIVKEAARENGVEVEEAYTIGLTGQEILEETERL 292
            +L CCKVY+SE RN+  L+ + + A+  S    A+V +F D  Y+R  +T    L   P     P+      ++  A EN+D+ +HS  +HPR+G VDH+ FHPL S PL+    +A  L   +G    VP  +YGA     R+L  +RR+  YFK          GL  +S +   D GP ++    G++  G+  +V NYN+ + ++  A   R+ + V  + GG   V+A+ L H     EVACNLL+ SK G +KV   VK+ A E G+ V + Y   L+ +EI+E   +L
Sbjct:   20 MLACCKVYISESRNKAALESIEQAAKLFSE--AAIVNKFEDVTYNRVGYTVVSKLAPKPSSNSHPLKSTVFAMVKAAFENIDLDMHS-GSHPRLGVVDHICFHPLASAPLDQVAEIAKSLAGDIGSDLQVPTFLYGAAHEEGRTLDSIRRNLGYFKPNSAGNQWAGGLNSESLLVKPDRGPDQVTQSKGVIVIGSTRWVDNYNVPVFSTNIAAVRRIAKRVSERGGGLASVQAIALTHGEVITEVACNLLEPSKIGGDKVQLEVKKLAGEEGMAVGKGYYTDLSQKEIIERYMKL 311          
BLAST of NO12G01090 vs. NCBI_GenBank
Match: XP_017424129.1 (PREDICTED: formimidoyltransferase-cyclodeaminase isoform X1 [Vigna angularis] >BAT92255.1 hypothetical protein VIGAN_07094000 [Vigna angularis var. angularis])

HSP 1 Score: 181.0 bits (458), Expect = 5.400e-42
Identity = 108/293 (36.86%), Postives = 153/293 (52.22%), Query Frame = 0
Query:   20 CCKVYVSEGRNQVVLDRLAEVARTASPGLCALVQRFTDAVYHRSNFTL---GGPPGP--VLEVALRVIDEALENLDMTLHSDATHPRVGAVDHVSFHPLGSTPLEAARNVAIVLGQRVGEKWPVPVLMYGAC--SSRSLAEVRRSTSYFK----------GLALDSEIPHADFGPTRIDPKLGLLCCGAVPYVQNYNIRLNTSEKAVAARVTRAVRSKDGGPEGVEALTLRHDRGFMEVACNLLDLSKTGPEKVLEIVKEAARENGVEVEEAYTIGLTGQEILEETERLLREE 296
            CCKVY+SE RN++ L+ + E A T  P L  ++ +F D  Y+R  +TL    G  GP  +    L ++  A + +D  +HS  THPR+G VDH+ FHPL    L+ A   A  L   +G    VP  +YGA     R+L  +RR   YFK          GL  DS     D GP+++    G+   GA  +V NYNI L +S+     R+ + V  + GG   V+A+ L H  G +EVACNLLD SK G E+V E V+  ARE G+ VE  Y    +  +I+    +L + +
Sbjct:    8 CCKVYISESRNRIALESI-ERASTLFP-LAPIINKFEDVAYNRVGYTLVSEMGVSGPSHLANAVLAMVKAAFDTIDFDVHS-GTHPRLGVVDHICFHPLLDASLDQAATTARCLATDMGSNLQVPTYLYGAAHEEGRTLDSIRRVFGYFKPNSSENQWIGGLKSDSLPLKPDRGPSQVTSAKGVAVIGATNWVDNYNIPLLSSDINAVRRIAKQVSGRGGGLPSVQAMALAHGEGVIEVACNLLDPSKVGGERVQEEVESLAREEGISVERGYYTDFSQDQIISSYFKLFQNK 297          
BLAST of NO12G01090 vs. NCBI_GenBank
Match: XP_020218742.1 (formimidoyltransferase-cyclodeaminase-like [Cajanus cajan] >KYP64060.1 Formimidoyltransferase-cyclodeaminase [Cajanus cajan])

HSP 1 Score: 181.0 bits (458), Expect = 5.400e-42
Identity = 101/292 (34.59%), Postives = 156/292 (53.42%), Query Frame = 0
Query:   20 CCKVYVSEGRNQVVLDRLAEVARTASPGLCALVQRFTDAVYHRSNFTLG---GPPGP--VLEVALRVIDEALENLDMTLHSDATHPRVGAVDHVSFHPLGSTPLEAARNVAIVLGQRVGEKWPVPVLMYGAC--SSRSLAEVRRSTSYFK----------GLALDSEIPHADFGPTRIDPKLGLLCCGAVPYVQNYNIRLNTSEKAVAARVTRAVRSKDGGPEGVEALTLRHDRGFMEVACNLLDLSKTGPEKVLEIVKEAARENGVEVEEAYTIGLTGQEILEETERLLRE 295
            CCKVY+SE RN+  L+ +   ++     L  ++ +F D  Y+R  +TL    GP GP  +    L ++  A + +D  +HS  THPR+G VDH+ FHPL    L+ A  +A  L   +G    VP  +YGA     R+L  +RR   YFK          GL  D+   + D GP+++ P  G++  GA  +V NYN+ L +S+ +V  R+ + V  +  G   ++A+ L H  G +EVACNLLD +K G E+V + V+  ARE G+ V + Y    +  +I+    +L +E
Sbjct:    8 CCKVYISESRNRSALESIERASKLYP--LAPIINKFQDVAYNRVGYTLVSQLGPSGPCHLANAVLAMVRAAFDTIDFEVHS-GTHPRLGVVDHICFHPLLGASLDQAATIARCLATDMGSSLQVPTYLYGAAHEEGRTLDSIRRIFGYFKPNSSENQWIGGLKSDTLPLNPDSGPSQVTPAKGVVVIGATNWVDNYNVPLLSSDISVVRRIAKRVSGRGDGLPSIQAMALAHGEGVIEVACNLLDPNKVGGERVQQEVESLAREQGISVGKGYYTDFSQDQIVSSYLKLFQE 296          
The following BLAST results are available for this feature:
BLAST of NO12G01090 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
CBN76612.11.200e-5444.60conserved unknown protein [Ectocarpus siliculosus][more]
XP_004487323.19.900e-4435.23PREDICTED: formimidoyltransferase-cyclodeaminase-l... [more]
XP_012572038.19.900e-4435.23PREDICTED: QWRF motif-containing protein 4-like is... [more]
XP_005648505.12.900e-4339.04Formiminotransferase [Coccomyxa subellipsoidea C-1... [more]
XP_020227546.12.400e-4235.27formimidoyltransferase-cyclodeaminase-like [Cajanu... [more]
XP_004964370.13.200e-4236.68uncharacterized protein LOC101767576 [Setaria ital... [more]
XP_006431512.14.200e-4234.92uncharacterized protein LOC18041467 isoform X2 [Ci... [more]
XP_024040535.14.200e-4234.92uncharacterized protein LOC18041467 isoform X1 [Ci... [more]
XP_017424129.15.400e-4236.86PREDICTED: formimidoyltransferase-cyclodeaminase i... [more]
XP_020218742.15.400e-4234.59formimidoyltransferase-cyclodeaminase-like [Cajanu... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL124nonsL124Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR014ncniR014Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR006ngnoR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010023NSK010023Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO12G01090.1NO12G01090.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|591936gene_5264Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO12G01090.1NO12G01090.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO12G01090 ID=NO12G01090|Name=NO12G01090|organism=Nannochloropsis oceanica|type=gene|length=1116bp
AACAGACCTCCAAGCACAGGATAGCGGCAAGGCAGCAGCTTGAACCTCCT
CCTGTCTTGGCACCAGCAAGACAGCCCGACTCTCATAATCGTCATTCCCC
GAGCAAGCTGTCCAACCCATGCCCTTGACACCCCCCGTCATCGCTTCCCC
GCCGTCCTCTGCCCGTCTGCTCGTGTGTTGCAAGGTCTATGTCTCCGAAG
GCAGGAATCAAGTCGTGTTGGATCGCCTGGCCGAAGTGGCACGCACGGCC
TCTCCCGGGTTGTGTGCATTGGTCCAGCGCTTCACGGACGCCGTCTACCA
CCGCAGCAATTTTACATTGGGTGGGCCCCCGGGACCTGTGCTGGAGGTGG
CTTTGAGGGTGATTGACGAGGCTTTGGAGAATTTAGACATGACCCTGCAC
AGCGATGCCACCCATCCGCGGGTGGGCGCTGTGGATCATGTTTCCTTCCA
CCCCCTGGGGAGCACTCCGTTGGAGGCTGCCCGGAACGTCGCAATAGTAC
TAGGACAAAGGGTTGGGGAGAAGTGGCCTGTGCCGGTTTTGATGTATGGG
GCATGTAGTTCTAGATCGTTGGCGGAAGTGCGGAGGAGCACGTCCTATTT
CAAGGGGCTGGCACTTGACAGCGAGATACCCCATGCTGATTTCGGGCCTA
CCCGCATAGATCCCAAGTTGGGGTTGCTTTGTTGTGGTGCGGTGCCTTAT
GTCCAGAATTATAACATTCGGTTGAATACATCGGAGAAAGCGGTTGCGGC
CAGGGTGACGCGTGCGGTGCGAAGCAAGGATGGAGGACCGGAGGGGGTGG
AGGCCTTGACCTTGAGACATGACAGAGGGTTTATGGAAGTGGCGTGTAAT
TTACTCGATCTGAGTAAGACGGGTCCAGAGAAGGTTTTGGAGATTGTAAA
GGAGGCGGCGAGGGAGAATGGGGTTGAGGTGGAGGAGGCATATACGATTG
GTTTGACGGGGCAAGAGATATTGGAGGAGACGGAGCGATTATTGAGGGAA
GAAGGGGATAAGAGTAGGGTAAGAATGTGAGAAATATTGAAGAAGGAACC
AAAATGTAATGTAAAAAAAATGATGGATGACGATGATAGAAGAAATCTTT
TCGTCGTCATTGAATG
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protein sequence of NO12G01090.1

>NO12G01090.1-protein ID=NO12G01090.1-protein|Name=NO12G01090.1|organism=Nannochloropsis oceanica|type=polypeptide|length=304bp
MPLTPPVIASPPSSARLLVCCKVYVSEGRNQVVLDRLAEVARTASPGLCA
LVQRFTDAVYHRSNFTLGGPPGPVLEVALRVIDEALENLDMTLHSDATHP
RVGAVDHVSFHPLGSTPLEAARNVAIVLGQRVGEKWPVPVLMYGACSSRS
LAEVRRSTSYFKGLALDSEIPHADFGPTRIDPKLGLLCCGAVPYVQNYNI
RLNTSEKAVAARVTRAVRSKDGGPEGVEALTLRHDRGFMEVACNLLDLSK
TGPEKVLEIVKEAARENGVEVEEAYTIGLTGQEILEETERLLREEGDKSR
VRM*
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Synonyms
Publications