NO12G00950, NO12G00950 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO12G00950 vs. NCBI_GenBank
Match: EWM25924.1 (glycosyl family 43 [Nannochloropsis gaditana]) HSP 1 Score: 582.0 bits (1499), Expect = 1.300e-162 Identity = 265/338 (78.40%), Postives = 289/338 (85.50%), Query Frame = 0 Query: 16 VLPLRPCSAKLVLYDNTRPMLDTEGRILDAHDGTIQRFHDDGPYYMHAVEYGLCQAPNVTGCDSPDRCGFRLDHNVSVYASWDLSSGSWAFQGYAFHWTERPAGTLFRPSAVFNPNTCEYVLWWNYVYPNGTYAGFAVATSSKPEGHFEQRRTVVPIAHLPAGDFHLFVDDDGTGYVLYSADFWITVQELTRDFLSVTEKIFDGFRGNQSEWGWEAPVMFKRQGLYYILTGPMCCFCYQGSGIRVYTASSPLGPYTFQGQDIACQTXXXXXXXXXXXXXXXSPATAVADGPVSTPNQGCLFYSSDQASATRAQQNFVVEVRTAAGETEYLWTGDRWMQ 354 +LPL +AK VL+DNT+P DTEGRILDAHDGTIQRFH DGPYYMHAVEYGLCQAPN+TGCDSPDRCGFRLDHN+SVY SWDLSSGSWAFQGYAF WTERPAGTLFRPSAVFNP T EY+LWWNYVYPNGTYAGFAVATSSKP+G FEQRR V IAHLPAGDFHLFVDDDGTGYVLYSADFWIT++ELT DFL V+ + FDGFRGN SEWG+EAPVMFKR+G+YYIL GPMCCFCYQGSGIRVYTA+SPLGPYTFQG DIAC + + A DGP+ TP QGCLFY +DQ S TRAQQNFV+EV+T+ GETEY+WTGDRWMQ Sbjct: 15 LLPLPTATAKFVLFDNTKPAFDTEGRILDAHDGTIQRFHKDGPYYMHAVEYGLCQAPNITGCDSPDRCGFRLDHNLSVYTSWDLSSGSWAFQGYAFPWTERPAGTLFRPSAVFNPTTHEYILWWNYVYPNGTYAGFAVATSSKPQGPFEQRRAQVNIAHLPAGDFHLFVDDDGTGYVLYSADFWITIEELTPDFLGVSGRAFDGFRGNGSEWGFEAPVMFKRKGIYYILFGPMCCFCYQGSGIRVYTATSPLGPYTFQGDDIACAS--------KGTFAATAHTRADNDGPIPTPEQGCLFYGTDQISTTRAQQNFVIEVQTSGGETEYVWTGDRWMQ 344
BLAST of NO12G00950 vs. NCBI_GenBank
Match: XP_005853946.1 (glycosyl family 43 [Nannochloropsis gaditana CCMP526] >EKU22413.1 glycosyl family 43 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 580.1 bits (1494), Expect = 5.100e-162 Identity = 264/338 (78.11%), Postives = 288/338 (85.21%), Query Frame = 0 Query: 16 VLPLRPCSAKLVLYDNTRPMLDTEGRILDAHDGTIQRFHDDGPYYMHAVEYGLCQAPNVTGCDSPDRCGFRLDHNVSVYASWDLSSGSWAFQGYAFHWTERPAGTLFRPSAVFNPNTCEYVLWWNYVYPNGTYAGFAVATSSKPEGHFEQRRTVVPIAHLPAGDFHLFVDDDGTGYVLYSADFWITVQELTRDFLSVTEKIFDGFRGNQSEWGWEAPVMFKRQGLYYILTGPMCCFCYQGSGIRVYTASSPLGPYTFQGQDIACQTXXXXXXXXXXXXXXXSPATAVADGPVSTPNQGCLFYSSDQASATRAQQNFVVEVRTAAGETEYLWTGDRWMQ 354 +LPL +AK VL+DNT+P DTEGRILDAHDGTIQRFH DGPYYMHAVEYGLCQAPN+TGCDSPDRCGFRLDHN+SVY SWDLS GSWAFQGYAF WTERPAGTLFRPSAVFNP T EY+LWWNYVYPNGTYAGFAVATSSKP+G FEQRR V IAHLPAGDFHLFVDDDGTGYVLYSADFWIT++ELT DFL V+ + FDGFRGN SEWG+EAPVMFKR+G+YYIL GPMCCFCYQGSGIRVYTA+SPLGPYTFQG DIAC + + A DGP+ TP QGCLFY +DQ S TRAQQNFV+EV+T+ GETEY+WTGDRWMQ Sbjct: 15 LLPLPTATAKFVLFDNTKPAFDTEGRILDAHDGTIQRFHKDGPYYMHAVEYGLCQAPNITGCDSPDRCGFRLDHNLSVYTSWDLSCGSWAFQGYAFPWTERPAGTLFRPSAVFNPTTHEYILWWNYVYPNGTYAGFAVATSSKPQGPFEQRRAQVNIAHLPAGDFHLFVDDDGTGYVLYSADFWITIEELTPDFLGVSGRAFDGFRGNGSEWGFEAPVMFKRKGIYYILFGPMCCFCYQGSGIRVYTATSPLGPYTFQGDDIACAS--------KGTFAATAHTRADNDGPIPTPEQGCLFYGTDQISTTRAQQNFVIEVQTSGGETEYVWTGDRWMQ 344
BLAST of NO12G00950 vs. NCBI_GenBank
Match: XP_023329794.1 (uncharacterized protein LOC111702366 isoform X1 [Eurytemora affinis]) HSP 1 Score: 167.5 bits (423), Expect = 7.900e-38 Identity = 108/344 (31.40%), Postives = 155/344 (45.06%), Query Frame = 0 Query: 28 LYDNTRPMLDTEGRILDAHDGTIQRFHDDGPYYMHAVEY-------GLCQAPNVTGCDSP-DRCGFRLDHNVSVYASWDLSSGSWAFQGYAFHWTERPAGTLFRPSAVFNPNTCEYVLWWNYVYPNGT------YAGFAVATSSKPEGHFEQRRTVVPIAHLPAGDFHLFV---DDDGTGYVLYSA---DFWITVQELTRDFLSVTEKIFDGFRGNQSEWGWEAPVMFKRQGLYYILTGPMCCFCYQGSGIRVYTASSPLGPYTFQGQDIACQTXXXXXXXXXXXXXXXSPATAVADGPVSTPNQGCLFYSSDQASATRAQQNFVVEVRTAAGETEYLWTGDRW 352 + DNT P D +G ++D HDG ++R+ ++ ++ + + Y G+ N G S RCGFR DH V++Y S DL +W F F RP G FRP +FN EYVLW NY+ P + A VA S P G F I GDF+L + D++ Y+ Y A + + +++LT ++ + G+ S EAP++F+R G YY+L G CCFC QGSG V+ + PLGP+ DI N G L +AQ N+V+ ++ A E EYL+TGD W Sbjct: 21 IIDNTVPRTDADGNLMDVHDGNVERWEENNLFHWYGMGYQDCELEKGIIPPRNCPGIYSEFGRCGFRNDHAVNLYTSPDLH--NWTFVADIFPVESRPEGIYFRPKVIFNKKNKEYVLWINYLAPASSPLASYPDARLMVAVSPSPSGPFTIVTEKAGIEESGGGDFNLMIDPNDENAAAYIAYDAWGNNHALVIEQLTPNYYDALGSL--ASTGSISPINNEAPILFERSGWYYLLYGHTCCFCEQGSGAEVWVSQHPLGPWINMHTDI---------------------------------NPGFL-----GVRDIKAQCNYVITLQLADEEPEYLYTGDLW 322
BLAST of NO12G00950 vs. NCBI_GenBank
Match: XP_023329796.1 (uncharacterized protein LOC111702366 isoform X2 [Eurytemora affinis]) HSP 1 Score: 152.9 bits (385), Expect = 2.000e-33 Identity = 102/329 (31.00%), Postives = 146/329 (44.38%), Query Frame = 0 Query: 43 LDAHDGTIQRFHDDGPYYMHAVEY-------GLCQAPNVTGCDSP-DRCGFRLDHNVSVYASWDLSSGSWAFQGYAFHWTERPAGTLFRPSAVFNPNTCEYVLWWNYVYPNGT------YAGFAVATSSKPEGHFEQRRTVVPIAHLPAGDFHLFV---DDDGTGYVLYSA---DFWITVQELTRDFLSVTEKIFDGFRGNQSEWGWEAPVMFKRQGLYYILTGPMCCFCYQGSGIRVYTASSPLGPYTFQGQDIACQTXXXXXXXXXXXXXXXSPATAVADGPVSTPNQGCLFYSSDQASATRAQQNFVVEVRTAAGETEYLWTGDRW 352 +D HDG ++R+ ++ ++ + + Y G+ N G S RCGFR DH V++Y S DL +W F F RP G FRP +FN EYVLW NY+ P + A VA S P G F I GDF+L + D++ Y+ Y A + + +++LT ++ + G+ S EAP++F+R G YY+L G CCFC QGSG V+ + PLGP+ DI N G L +AQ N+V+ ++ A E EYL+TGD W Sbjct: 1 MDVHDGNVERWEENNLFHWYGMGYQDCELEKGIIPPRNCPGIYSEFGRCGFRNDHAVNLYTSPDLH--NWTFVADIFPVESRPEGIYFRPKVIFNKKNKEYVLWINYLAPASSPLASYPDARLMVAVSPSPSGPFTIVTEKAGIEESGGGDFNLMIDPNDENAAAYIAYDAWGNNHALVIEQLTPNYYDALGSL--ASTGSISPINNEAPILFERSGWYYLLYGHTCCFCEQGSGAEVWVSQHPLGPWINMHTDI---------------------------------NPGFL-----GVRDIKAQCNYVITLQLADEEPEYLYTGDLW 287
BLAST of NO12G00950 vs. NCBI_GenBank
Match: WP_020566822.1 (hypothetical protein [Lewinella persica]) HSP 1 Score: 151.0 bits (380), Expect = 7.700e-33 Identity = 102/274 (37.23%), Postives = 136/274 (49.64%), Query Frame = 0 Query: 2 LSLSLVWSLLTVVGVLPLRPCSAKLVLYDNTRPMLDTEGRILDAHDGTIQRFHDDGPYYMHAVEYGLCQAPNVTGCDSPDRCGFRLDHNVSVYASWDLSSGSWAFQGYAFHWTERPAGTLFRPSAVFNPNTCEYVLWWNYVYPNGTYAGFAVATSSKPEGHFEQRRTVVPIAH--LPAGDFHLFVDDDGTGYVLYSA--DFWITVQELTRDFLSVTEKIFDGFRGNQSEWGWEAPVMFKRQGLYYILTGPMCCFCYQGSGIRVYTASSPLGPYT 272 L L L SL T P K V N P T+G+I+DAHDG I +F + +Y + +YG GF + VY S D+ +W G A E PAG +RP +FN + +YVLW+N+ YP F VA S PEG F + V +AH L GDF LFVD+D T Y+ Y+ ++V++LT D+L T++ G EA MFKR +YY+LT CCFC QG+G RVY +PLG +T Sbjct: 5 LPLLLCLSLCTCAPAPENSP--GKSVTLSNLEPRRTTDGKIVDAHDGRIIQFGEF--FYWYGTQYGTTN-------------GFTKANEYHVYRSPDMV--NWEHIGAAL--AEAPAGVYYRPHVIFNEASGKYVLWYNW-YPELWDGHFGVAVSDTPEGPFRIVSSDVAVAHSELGVGDFGLFVDEDRTAYISYNTINGHRVSVEKLTPDYLGSTKE-----NGGYIAQYCEAGSMFKRNDIYYLLTDYTCCFCNQGAGARVYMTDNPLGQWT 251
BLAST of NO12G00950 vs. NCBI_GenBank
Match: WP_106145140.1 (hypothetical protein [Muricauda pacifica] >PRX53802.1 glycosyl hydrolase family 43 [Muricauda pacifica]) HSP 1 Score: 147.5 bits (371), Expect = 8.500e-32 Identity = 87/249 (34.94%), Postives = 130/249 (52.21%), Query Frame = 0 Query: 27 VLYDNTRPMLDTEGRILDAHDGTIQRFHDDGPYYMHAVEYGLCQAPNVTGCDSPDRCGFRLDHNVSVYASWDLSSGSWAFQGYAFHWTERPAGTLFRPSAVFNPNTCEYVLWWNYVYPNGTYAGFAVATSSKPEGHFE--QRRTVVPIAHLPAGDFHLFVDDDGTGYVLYSA--DFWITVQELTRDFLSVTEKIFDGFRGNQSEWGWEAPVMFKRQGLYYILTGPMCCFCYQGSGIRVYTASSPLGPYT 272 + DN P LD + +I+DAHDG + +F D +Y A E + GF ++ Y+S DL +W ++G ++P G +RP ++N +T +Y+LW+N+ YP F VA S P+G F+ + + + GDF LFVDDD TGY+ Y+ + ++V++L+ D+LS T + G EA MFK+ G YY+LT CCFC GSG RVY + +PL YT Sbjct: 25 ITVDNALPRLDEKNQIVDAHDGRVIQFGDTFYWYGTAYE---------------NTNGFTPQNHYRCYSSKDLM--NWKYEGKLLE--DQPEGVYYRPHVIYNRSTKKYLLWYNW-YPKLWEGQFGVAISDTPQGPFKIVNENVQMHNSEIGLGDFGLFVDDDETGYISYNTIKNHQVSVEKLSDDYLSSTFE-----NGGTISKHMEAGTMFKKDGYYYLLTDYTCCFCNYGSGARVYISKNPLKGYT 248
BLAST of NO12G00950 vs. NCBI_GenBank
Match: WP_068215017.1 (hypothetical protein [Lewinella sp. 4G2] >OAV43760.1 hypothetical protein A3850_004275 [Lewinella sp. 4G2]) HSP 1 Score: 144.8 bits (364), Expect = 5.500e-31 Identity = 89/245 (36.33%), Postives = 121/245 (49.39%), Query Frame = 0 Query: 31 NTRPMLDTEGRILDAHDGTIQRFHDDGPYYMHAVEYGLCQAPNVTGCDSPDRCGFRLDHNVSVYASWDLSSGSWAFQGYAFHWTERPAGTLFRPSAVFNPNTCEYVLWWNYVYPNGTYAGFAVATSSKPEGHFEQRRTVVPIAH--LPAGDFHLFVDDDGTGYVLYSA--DFWITVQELTRDFLSVTEKIFDGFRGNQSEWGWEAPVMFKRQGLYYILTGPMCCFCYQGSGIRVYTASSPLGPYT 272 N P L +G+I+DAHDG I F +G YY + +YG GF + VY S D+ +W G A + P G +RP ++N + +YVLW+N+ YP F VA S P G F V + H L GDF LFVD D T Y+ Y+ ++V++L+ D+L T + G EA MFKR G+YY+LT CCFC QG+G RVY + PL +T Sbjct: 40 NVEPRLTKDGQIVDAHDGRIIEF--EGAYYWYGTQYGKTN-------------GFTTANEYHVYRSDDMV--TWEHLGPAL--ADHPEGVHYRPHVIYNAASKQYVLWYNW-YPTLWEGHFGVAVSDSPGGPFTLVNDDVKVTHSDLGVGDFGLFVDADQTAYISYNTIDGHRVSVEKLSADYLGSTLE-----NGGYIAQYCEAGSMFKRNGIYYLLTDYTCCFCNQGAGARVYMSDDPLSEWT 259
BLAST of NO12G00950 vs. NCBI_GenBank
Match: WP_069893785.1 (hypothetical protein [Candidatus Marispirochaeta associata]) HSP 1 Score: 139.8 bits (351), Expect = 1.800e-29 Identity = 110/341 (32.26%), Postives = 143/341 (41.94%), Query Frame = 0 Query: 31 NTRPMLDTEGRILDAHDGTIQRFHDDGPYYMHAVEYGLCQAPNVTGCDSPDRCGFRLDHNVSVYASWDLSSGSWAFQGYAFHWTERPAGTLFRPSAVFNPNTCEYVLWW----NYVYPNGTYAGFAVATSSKPEGHFEQRRTVVPIAHLPAGDFHLFVDDDGTGYVLYSA-DF----------WITVQELTRDFLSVTEKIFDGFRGNQSEWGWEAPVMFKRQGLYYILTGPMCCFCYQGSGIRVYTASSPLGPYTFQGQDIACQTXXXXXXXXXXXXXXXSPATAVADGPVSTPNQGCLFYSSDQASATRAQQNFVVEVRTAAGETEYLWTGDRWMQVRR 357 N P D +G ILDAH G ++ YY + V Y D GF + Y+S D+ +W F G P G FRP +F+P +YVLW+ Y + VA S P G F+ T + ++ +GD LF+DDDGT Y++YSA DF ITV+ L D+LS T + R + EAP MFKR GLYY L +GSG RVYTA P+GPYT++G V P TP +AQQN V + T G EY+W GDRW + Sbjct: 9 NKIPRKDIDGNILDAHGGAHFNVFEN-RYYNYGVHY-------------MDTDGFSPTQHYVAYSSPDME--NWTFHGPILE-EGAPEGLYFRPHVIFSPKIGKYVLWYLWYKEYRHAAANICHKGVAVSDTPIGPFKILDTNIELSGGLSGDHDLFLDDDGTAYLIYSAHDFSRKEGKHKEAVITVERLKDDYLSST---LEASRIDAEGIPCEAPAMFKRNGLYYFLFDRWTDRGPRGSGARVYTAEHPMGPYTYRGN--------------------------VNRHPGGTP-------------IIKAQQNTVAPIETPDG-IEYIWVGDRWKSAEK 289
BLAST of NO12G00950 vs. NCBI_GenBank
Match: OJY81057.1 (hypothetical protein BGP14_07475 [Sphingobacteriales bacterium 44-15]) HSP 1 Score: 139.4 bits (350), Expect = 2.300e-29 Identity = 88/266 (33.08%), Postives = 136/266 (51.13%), Query Frame = 0 Query: 10 LLTVVGVLPLRPCSA-KLVLYDNTRPMLDTEGRILDAHDGTIQRFHDDGPYYMHAVEYGLCQAPNVTGCDSPDRCGFRLDHNVSVYASWDLSSGSWAFQGYAFHWTERPAGTLFRPSAVFNPNTCEYVLWWNYVYPNGTYAGFAVATSSKPEGHFEQRRTVVPIAH--LPAGDFHLFVDDDGTGYVLYSA--DFWITVQELTRDFLSVTEKIFDGFRGNQSEWGWEAPVMFKRQGLYYILTGPMCCFCYQGSGIRVYTASSPLGPY 271 L+T++ + + P A K ++ +N P +DTEG I+DAHDG I ++ +Y + YG + G+ + Y+S DL+ +W +G + P+G +RP ++N T +YVLW+N+ YP + VA + +P G F T V + + GDF LF+DDD Y+ Y+ ++++L+ D+L T + G G EA MFKR G YY+LT CCFC QG+G+RVY + SP Y Sbjct: 5 LITILFISLVIPVLAQKEIVINNIIPRVDTEGNIIDAHDGRIVKY--GNRFYWYGTAYG-------------NTSGYLRSNYFQCYSSPDLT--TWKKEGKLL--IDFPSGVYYRPHVIYNAVTRQYVLWYNW-YPKLWEGRYGVAVADRPTGPFRIVNTDVKMKNSAYGVGDFGLFIDDDKAAYIAYNTIDGHKGSIEKLSADYLQSTLE-----NGGFITEGCEAGAMFKRNGKYYLLTDYTCCFCTQGTGVRVYVSDSPTRGY 245
BLAST of NO12G00950 vs. NCBI_GenBank
Match: WP_107215896.1 (hypothetical protein [Pedobacter sp. YL28-9] >PST83634.1 hypothetical protein C7T94_13945 [Pedobacter sp. YL28-9]) HSP 1 Score: 138.7 bits (348), Expect = 3.900e-29 Identity = 100/254 (39.37%), Postives = 127/254 (50.00%), Query Frame = 0 Query: 37 DTEGRILDAHDGTIQRFHDDGPYYMHAVEYGLCQAPNVTGCDSPDRCGFRLDHNVSVYASWDLSSGSWAFQGYAFH-----WTERPAGT---LFRPSAVFNPNTCEYVLWWNYVYPNGTYAGFAVATSSKPEGHF----EQRRTV---VPIAHLPAGDFHLFVDDDGTGYVLYS---ADFWITVQELTRDFLSVTEKIFDGFRGNQSEWGWEAPVMFKRQGLYYI-LTGPMCCFCYQGSGIRVYTASSPLGPYT 272 D G +DAHDG I F DG YY++ YG G CGF+ VY+S D+ +W +G+ F W R G FRP V+N T YVLW N VY N GF V TSS P G F E R V P+A L GD FVD+DGTGY+ Y+ I ++ELT D+LS T K ++ EAP +FKR+GLYY+ + P C +C G+G TA SPLGP++ Sbjct: 53 DNMGEAVDAHDGEIAFF--DGVYYLYGTSYG---CGFEWGRKDAPFCGFK------VYSSTDMV--TWTDRGFLFDATTPVWQSRCNGNTYGCFRPHVVYNKKTGLYVLWIN-VYDN--QVGFRVFTSSSPTGPFKEVAEPRLAVNSEAPVAGLNNGDHDTFVDEDGTGYIAYTDWRTKGTIVIEELTGDYLSGTGKHVKSVTAGKT----EAPALFKRKGLYYVTYSDPNCGYC-SGTGTSYKTAKSPLGPWS 285 The following BLAST results are available for this feature:
BLAST of NO12G00950 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO12G00950 ID=NO12G00950|Name=NO12G00950|organism=Nannochloropsis oceanica|type=gene|length=3953bpback to top protein sequence of NO12G00950.1 >NO12G00950.1-protein ID=NO12G00950.1-protein|Name=NO12G00950.1|organism=Nannochloropsis oceanica|type=polypeptide|length=409bpback to top protein sequence of NO12G00950.2 >NO12G00950.2-protein ID=NO12G00950.2-protein|Name=NO12G00950.2|organism=Nannochloropsis oceanica|type=polypeptide|length=388bpback to top Synonyms
Publications
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