NO12G00940, NO12G00940 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO12G00940 vs. NCBI_GenBank
Match: EWM25925.1 (hypothetical protein Naga_100134g12 [Nannochloropsis gaditana]) HSP 1 Score: 404.4 bits (1038), Expect = 6.200e-109 Identity = 233/584 (39.90%), Postives = 285/584 (48.80%), Query Frame = 0 Query: 47 LLLGTIILMVRSETGSMRPSVIYSALSAKLRQTAQPPAPPFLLTDDANFRQDDIRFTWVPREEHQELNAVKEVDAE---AAHGQQVAVYDLIVEGYDMQMFKDQAAAHACLRNKSIVFVGDSLTRYQYLNLVNFIENGQWGGPDPQLENELQWGGWPLFYEGTNARFNGREICDCYRKDPAFRRGNIENRYYYNEEANVWVSFFQWFREETGHLGHDFDWLNVSLPPPRSRRAPSCRGKPNNVRMEKKTEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLNSPPLAAAPSLPPRALDNKTEGYTSLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAGCLPGACNVLPDWEYDVYDFFTHIVPKLHPDILIVNSGHWARLPGEYDMPRLSEVVREAVRASGGRAIWKTTTARREPAAFLPEDDLKEYFHGEGFSILDAGAITYAARGIETHLNETQNTHLYWDTLHFYAPIYAGLNNVLLNYICP 628 +L+ IL SETG R S Y + K++ P A PFLLTD +F +++ + W E +E+ A E + G VA L+V+GYDMQ F+D+ AA +CLRNKSIV VGDSLTRYQYLNLVNF+ENG WGGPDPQLENE QW GW FY+GTNARFNGREICDCYR++PA RRGNIENRYY+NE +VWV+FFQWF GH GH+ WLNVS+PPPR RAP G+ +V L+ A S+P R Q GC PGAC+ P W YDVY FT++VP L+PD+L+ NSGHW RLPG YD+ +L++ EAVR S GR ++KTTT R F PEDDLK++F +G SILDAGAITY ++ L TQ+THL+WD LHFYAP+Y GLN VLLNY+CP Sbjct: 36 VLVIAFILAAFSETGRTRASRWYGTIIFKIKPPMVPVA-PFLLTDRKSFESEELHYLW-KVENQREIAATTEANGARNVTGPGAGVAACTLVVDGYDMQSFEDRTAALSCLRNKSIVMVGDSLTRYQYLNLVNFLENGVWGGPDPQLENEFQWKGWLPFYQGTNARFNGREICDCYREEPAERRGNIENRYYHNEVLDVWVTFFQWFNPACGHQGHNLTWLNVSVPPPRLDRAPKRYGQTPDV---------------------------------DEWRNLYREGRHFQEKTSMRSDASAMPLTSTLHLLEEKEASSIPSR----------------------------------------------------------------------------------------------------------------QRGCEPGACDQEPHWVYDVYGLFTNVVPLLNPDVLVFNSGHWGRLPGAYDLEQLAQSAIEAVRVSNGRVVYKTTTWPRINDPFAPEDDLKDFFQRQGISILDAGAITYPVAALDNQLVSTQSTHLFWDGLHFYAPVYEGLNKVLLNYLCP 472
BLAST of NO12G00940 vs. NCBI_GenBank
Match: EWM25922.1 (hypothetical protein Naga_100134g10 [Nannochloropsis gaditana]) HSP 1 Score: 389.8 bits (1000), Expect = 1.600e-104 Identity = 224/584 (38.36%), Postives = 280/584 (47.95%), Query Frame = 0 Query: 47 LLLGTIILMVRSETGSMRPSVIYSALSAKLRQTAQPPAPPFLLTDDANFRQDDIRFTWVPREEHQELNAVKEVDAE---AAHGQQVAVYDLIVEGYDMQMFKDQAAAHACLRNKSIVFVGDSLTRYQYLNLVNFIENGQWGGPDPQLENELQWGGWPLFYEGTNARFNGREICDCYRKDPAFRRGNIENRYYYNEEANVWVSFFQWFREETGHLGHDFDWLNVSLPPPRSRRAPSCRGKPNNVRMEKKTEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLNSPPLAAAPSLPPRALDNKTEGYTSLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAGCLPGACNVLPDWEYDVYDFFTHIVPKLHPDILIVNSGHWARLPGEYDMPRLSEVVREAVRASGGRAIWKTTTARREPAAFLPEDDLKEYFHGEGFSILDAGAITYAARGIETHLNETQNTHLYWDTLHFYAPIYAGLNNVLLNYICP 628 +L IL S ++R S + + + P PFLLTD +F+ +++ F+W + E+ A E + G VA L+V+GYDMQ F+D+ AA +CLRNKSIV VGDSLTRYQY+NLVNF+ENG WGGPDPQLENE QW G+ FY+GTNARFNGRE CDCYR++PA RRGNIENRYY+NE +VWV+FF WF GH GH+ WLNVS+PPPR RAP G+ +V L+ A S+P R Q GC PGAC+ P W +DVY FT++VP L+PD+L+ NSGHW RLPG YD+ RL++ EAVR S GR ++KTTT R F PEDDLK++F +G SILDAGAITY ++ L TQ+THL+WD LHFYAP+YAGLN VLLNY+CP Sbjct: 62 VLFAGFILAALSNIDNIRGSRSWYTTTLSDIRAPMVPVAPFLLTDRESFKSEELHFSW-KVDNQLEIAATTEANGARNVTGPGAGVAACTLVVDGYDMQSFEDRTAALSCLRNKSIVMVGDSLTRYQYVNLVNFLENGVWGGPDPQLENECQWKGYQRFYQGTNARFNGRETCDCYREEPADRRGNIENRYYHNEVLDVWVTFFLWFNPACGHQGHNLTWLNVSVPPPRLDRAPKRYGQTPDV---------------------------------DEWRNLYREGRHFQEKTSVRSDASAMPLTSTLHLLEEKEASSIPSR----------------------------------------------------------------------------------------------------------------QRGCEPGACDQEPHWVHDVYGLFTNVVPLLNPDVLVFNSGHWGRLPGAYDLERLAQSAIEAVRVSNGRVVYKTTTWPRINDPFAPEDDLKDFFQRQGISILDAGAITYPVAALDNQLVSTQSTHLFWDRLHFYAPVYAGLNKVLLNYLCP 499
BLAST of NO12G00940 vs. NCBI_GenBank
Match: XP_005852543.1 (hypothetical protein NGA_0704500, partial [Nannochloropsis gaditana CCMP526] >EKU23288.1 hypothetical protein NGA_0704500, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 199.9 bits (507), Expect = 2.300e-47 Identity = 86/123 (69.92%), Postives = 99/123 (80.49%), Query Frame = 0 Query: 164 DSLTRYQYLNLVNFIENGQWGGPDPQLENELQWGGWPLFYEGTNARFNGREICDCYRKDPAFRRGNIENRYYYNEEANVWVSFFQWFREETGHLGHDFDWLNVSLPPPRSRRAPSCRGKPNNV 287 ++ RYQYLNLVNF+ENG WGGPDPQLENE QW GW FY+GTNARFNGREICDCYR++PA RRGNIENRYY+NE +VWV+FFQWF GH GH+ WLNVS+PPPR RAP G+ +V Sbjct: 8 ETFVRYQYLNLVNFLENGVWGGPDPQLENEFQWKGWLPFYQGTNARFNGREICDCYREEPAERRGNIENRYYHNEVLDVWVTFFQWFNPACGHQGHNLTWLNVSVPPPRLDRAPKRYGQTPDV 130
BLAST of NO12G00940 vs. NCBI_GenBank
Match: PRW39195.1 (hypothetical protein C2E21_6907 [Chlorella sorokiniana]) HSP 1 Score: 98.6 bits (244), Expect = 7.300e-17 Identity = 58/151 (38.41%), Postives = 76/151 (50.33%), Query Frame = 0 Query: 130 AVYDLIVEGYDMQMFKDQAAAHACLRNKSIVFVGDSLTRYQYLNLVNFIENGQWGGP------DPQLENELQWGGWPLFYEGTNARFNGREICDCYRK------DPAFRR---------GNIENRYYYNEEANVWVSFFQWFREETGHLGH 260 +V + G ++ F A A CL K +VFVGDS+TRYQYL L++F++ QW P P + NE +W W F GT+ F GRE+CDCYR+ DP FRR ENR+Y N+ VS F + E GH Sbjct: 80 SVDQFTIRGCPLRRF-SHAEAVQCLAGKRLVFVGDSITRYQYLTLLHFLDRRQWPHPSGNQPGQPSVANEHEWPSWNAFLRGTSRLFGGRELCDCYREDLFQYFDPRFRRFVTWKPPEEEKFENRHY--RSGNLSVSHFTFTTEPNTVHGH 227
BLAST of NO12G00940 vs. NCBI_GenBank
Match: XP_005844900.1 (hypothetical protein CHLNCDRAFT_138448 [Chlorella variabilis] >EFN52798.1 hypothetical protein CHLNCDRAFT_138448 [Chlorella variabilis]) HSP 1 Score: 90.1 bits (222), Expect = 2.600e-14 Identity = 50/129 (38.76%), Postives = 67/129 (51.94%), Query Frame = 0 Query: 134 LIVEGYDMQMFKDQAAAHACLRNKSIVFVGDSLTRYQYLNLVNFIENGQWGGP------DPQLENELQWGGWPLFYEGTNARFNGREICDCYRKDPAF-------RRGNIENRYYYNEEANVWVSFFQW 250 L + G M+ + A A CL K +VFVGDSLTRYQYL L+ F+E G+W P P + NE W F GT+A F GRE+CDCYR++ + ENR++ + VS F + Sbjct: 105 LSIRGCTMKRY-SHAEAKQCLAGKRLVFVGDSLTRYQYLALIYFLEKGEWPAPLGGVPGQPSVTNEHDWND---FLRGTSALFGGRELCDCYRREYILGVTPRPPEKEKFENRFFITADGATAVSHFTY 229
BLAST of NO12G00940 vs. NCBI_GenBank
Match: PRW50804.1 (short-chain dehydrogenase reductase SDR [Chlorella sorokiniana]) HSP 1 Score: 86.7 bits (213), Expect = 2.900e-13 Identity = 45/108 (41.67%), Postives = 59/108 (54.63%), Query Frame = 0 Query: 150 AHACLRNKSIVFVGDSLTRYQYLNLVNFIENGQW--------GGPDPQLENELQWGGWPLFYEGTNARFNGREICDCYRKDPAFRRGNIENRYYYNEEANVWVSFFQW 250 A CL + +V +GDS+TRYQYL L+ F+E G+W G P P +E E WGGW FY+GT F R+ C CYR+ R E+R+Y + SFF W Sbjct: 366 ARTCLSGRPLVMIGDSVTRYQYLTLLYFLEFGKWPAPLLGGVGAPSPVIERE--WGGWTQFYKGTTEPFGERQQCRCYREGSWDIR---EDRFY--NSGTISTSFFMW 466
BLAST of NO12G00940 vs. NCBI_GenBank
Match: XP_014152744.1 (hypothetical protein SARC_08736 [Sphaeroforma arctica JP610] >KNC78842.1 hypothetical protein SARC_08736 [Sphaeroforma arctica JP610]) HSP 1 Score: 85.1 bits (209), Expect = 8.400e-13 Identity = 51/135 (37.78%), Postives = 72/135 (53.33%), Query Frame = 0 Query: 134 LIVEGYDMQMFKDQAAAHACLRNKSIVFVGDSLTRYQYLNLVNFIENGQWGGPDPQLE------NELQW---GGWPLFYEGTNARFNGREICDCYRKD-PAFRRGNIENRYYYNEEANVWVSFFQWFREE--TGH 257 L+V D Q + + A L+ K IVFVGDS RYQY+ ++ ++ENG W PD + + E W GGW F++ T G E CDCYR D + ENR+YYNE N+ +S+F ++ + GH Sbjct: 97 LLVSECDWQKYTRRGAIE-LLQGKHIVFVGDSRLRYQYVCMIFWLENGYW-PPDGEKDGFKSPVKESLWGGKGGWRAFFKDTAGYMKGNEYCDCYRNDHDMYVEPIYENRFYYNERYNLRLSYFVHYKTDMWAGH 229
BLAST of NO12G00940 vs. NCBI_GenBank
Match: XP_014150362.1 (hypothetical protein SARC_11039 [Sphaeroforma arctica JP610] >KNC76460.1 hypothetical protein SARC_11039 [Sphaeroforma arctica JP610]) HSP 1 Score: 82.8 bits (203), Expect = 4.200e-12 Identity = 47/129 (36.43%), Postives = 70/129 (54.26%), Query Frame = 0 Query: 134 LIVEGYDMQMFKDQAAAHACLRNKSIVFVGDSLTRYQYLNLVNFIENGQWGGPDPQLENELQ-------W---GGWPLFYEGTNARFNGREICDCYRKDP-AFRRGNIENRYYYNEEANVWVSFFQWFR 252 L+V+G D + F + A L K ++ VGDS RYQYL++ ++ENG W PD E +++ W GGW F+ TN+ NG E CDC+R+D ENRY + E+ NV V++ ++ Sbjct: 92 LVVDGCDWRKFTRKGALQ-ILSGKHLIMVGDSRVRYQYLSMAFWLENGYW-PPDTYGEGDIKSPAKEGLWRDIGGWKQFFSDTNSYLNGEEECDCFREDKWPIENIIFENRYLHMEKYNVKVTYLMHYK 218
BLAST of NO12G00940 vs. NCBI_GenBank
Match: GAX18973.1 (hypothetical protein FisN_8Hh194 [Fistulifera solaris]) HSP 1 Score: 80.9 bits (198), Expect = 1.600e-11 Identity = 46/101 (45.54%), Postives = 61/101 (60.40%), Query Frame = 0 Query: 155 RNKSIVFVGDSLTRYQYLNLVNFI-ENGQWGGPDPQ----LENELQWGGWPLFYEGTNARFNGREICDCYRKDPAFRRGNIENRYYYNEEANVWVSFFQWF 251 RN +I+F+GDSL+RYQYL+LV F+ NG W PD LEN + GW F+ TNA E CDC+R A + +ENRY+Y+ E N V++ Q F Sbjct: 89 RNLNILFMGDSLSRYQYLDLVYFLSHNGTWPSPDETPNMVLENTHK-HGWVQFFNFTNAALRPYEQCDCFRLHSAIKA--VENRYFYDAERNNSVTYLQKF 186
BLAST of NO12G00940 vs. NCBI_GenBank
Match: GAX15508.1 (hypothetical protein FisN_8Lh194 [Fistulifera solaris]) HSP 1 Score: 75.1 bits (183), Expect = 8.700e-10 Identity = 43/94 (45.74%), Postives = 55/94 (58.51%), Query Frame = 0 Query: 162 VGDSLTRYQYLNLVNFI-ENGQWGGPDPQ----LENELQWGGWPLFYEGTNARFNGREICDCYRKDPAFRRGNIENRYYYNEEANVWVSFFQWF 251 +GDSLTRYQYL+LV F+ NG W PD LEN + GW F+ TNA E CDC+R A + +ENRY+Y+ E N V++ Q F Sbjct: 1 MGDSLTRYQYLDLVYFLSHNGTWPSPDDTPNMVLENTHK-NGWVQFFNFTNAALRPYEQCDCFRLHSAIKA--VENRYFYDPERNNSVTYLQKF 91 The following BLAST results are available for this feature:
BLAST of NO12G00940 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 17
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO12G00940 ID=NO12G00940|Name=NO12G00940|organism=Nannochloropsis oceanica|type=gene|length=3096bpback to top protein sequence of NO12G00940.1 >NO12G00940.1-protein ID=NO12G00940.1-protein|Name=NO12G00940.1|organism=Nannochloropsis oceanica|type=polypeptide|length=629bpback to top protein sequence of NO12G00940.2 >NO12G00940.2-protein ID=NO12G00940.2-protein|Name=NO12G00940.2|organism=Nannochloropsis oceanica|type=polypeptide|length=556bpback to top Synonyms
Publications
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