NO12G00900, NO12G00900 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO12G00900 vs. NCBI_GenBank
Match: XP_005854273.1 (hypothetical protein NGA_0182520, partial [Nannochloropsis gaditana CCMP526] >EKU22091.1 hypothetical protein NGA_0182520, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 227.3 bits (578), Expect = 4.300e-56 Identity = 128/189 (67.72%), Postives = 148/189 (78.31%), Query Frame = 0 Query: 1 MSRSVEATRRRLNEERMSNDMETQPGQIFTSSSSSQPGQEPPPGHQT---LEIELDSPLKRNFKALLVLAVSVYGLREAKLLENLLWNKRVGSTALAVAVAASSVFVLLWAYLDVYVGTVQGQKVGYPEARRVTHTLLLSLLLTLVSLTVAIWPVYQAAALVYVCMVSYGVMFQVVILLPASVYNPLFF 187 MS VEA RRR E+R ++S Q Q P G T L+ ELDSPL+RNFKALLVLAVSVYGL+EAK +ENLLWNK+VG ALAV+VAASS+FVLLWAYLDVYVG V G++V YPEARRVTH LL+SLL+TLVSLT+A+WP+YQA ALV VCM+SYGV+FQVVIL+PASVYNPLFF Sbjct: 26 MSAGVEAARRRSREDR---------------TTSQQEEQRPLHGESTVQGLDYELDSPLRRNFKALLVLAVSVYGLKEAKFVENLLWNKKVGGAALAVSVAASSIFVLLWAYLDVYVGAVLGKQVDYPEARRVTHALLVSLLVTLVSLTIAVWPIYQATALVLVCMLSYGVLFQVVILVPASVYNPLFF 199
BLAST of NO12G00900 vs. NCBI_GenBank
Match: XP_005854170.1 (hypothetical protein NGA_0182510 [Nannochloropsis gaditana CCMP526] >EKU22193.1 hypothetical protein NGA_0182510 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 227.3 bits (578), Expect = 4.300e-56 Identity = 128/189 (67.72%), Postives = 148/189 (78.31%), Query Frame = 0 Query: 1 MSRSVEATRRRLNEERMSNDMETQPGQIFTSSSSSQPGQEPPPGHQT---LEIELDSPLKRNFKALLVLAVSVYGLREAKLLENLLWNKRVGSTALAVAVAASSVFVLLWAYLDVYVGTVQGQKVGYPEARRVTHTLLLSLLLTLVSLTVAIWPVYQAAALVYVCMVSYGVMFQVVILLPASVYNPLFF 187 MS VEA RRR E+R ++S Q Q P G T L+ ELDSPL+RNFKALLVLAVSVYGL+EAK +ENLLWNK+VG ALAV+VAASS+FVLLWAYLDVYVG V G++V YPEARRVTH LL+SLL+TLVSLT+A+WP+YQA ALV VCM+SYGV+FQVVIL+PASVYNPLFF Sbjct: 26 MSAGVEAARRRSREDR---------------TTSQQEEQRPLHGESTVQGLDYELDSPLRRNFKALLVLAVSVYGLKEAKFVENLLWNKKVGGAALAVSVAASSIFVLLWAYLDVYVGAVLGKQVDYPEARRVTHALLVSLLVTLVSLTIAVWPIYQATALVLVCMLSYGVLFQVVILVPASVYNPLFF 199
BLAST of NO12G00900 vs. NCBI_GenBank
Match: EWM25930.1 (hypothetical protein Naga_100134g6 [Nannochloropsis gaditana]) HSP 1 Score: 91.7 bits (226), Expect = 2.800e-15 Identity = 58/102 (56.86%), Postives = 67/102 (65.69%), Query Frame = 0 Query: 1 MSRSVEATRRRLNEERMSNDMETQPGQIFTSSSSSQPGQEPPPGHQT---LEIELDSPLKRNFKALLVLAVSVYGLREAKLLENLLWNKRVGSTALAVAVAA 100 MS VEA RRR E+R ++S Q Q P G T L+ ELDSPL+RNFKALLVLAVSVYGL+EAK +ENLLWNK+VG ALAV+VAA Sbjct: 26 MSAGVEAARRRSREDR---------------TTSQQEEQRPLHGESTVQGLDYELDSPLRRNFKALLVLAVSVYGLKEAKFVENLLWNKKVGGAALAVSVAA 112
BLAST of NO12G00900 vs. NCBI_GenBank
Match: OWZ00479.1 (putative membrane protein [Phytophthora megakarya]) HSP 1 Score: 66.6 bits (161), Expect = 9.800e-8 Identity = 40/136 (29.41%), Postives = 75/136 (55.15%), Query Frame = 0 Query: 62 ALLVLAVSVYGLREAKLLENLLWNKRVGSTALAVAVAASSVFVLLWAYLDVYVGTVQGQKVGYPEARRVTHTLLLSLLLTLVSLTVAIWPVYQAAALVYVCMVSYGVMFQVVILLPASVYNPLFFCAYAGFVYMWI 198 A+ L V+ +GL EA + +LL T + + + ++ L Y++VY + G++V Y A+ TH +L+S+L + L V +WPV+ L Y+ M S+GV+ Q++++LP + +F Y F++ ++ Sbjct: 54 AVAFLTVASFGLYEAHFVSDLLHAPHANRTFVHLGIFFGTLLGLFGCYIEVYRSMILGEQVHYESAKTATHGMLVSMLASGFCLAVGMWPVWHWLTLPYLIMWSWGVVLQLLVILPPILQRVVFVGGYLWFMHSYL 189
BLAST of NO12G00900 vs. NCBI_GenBank
Match: XP_009528910.1 (hypothetical protein PHYSODRAFT_510137 [Phytophthora sojae] >EGZ15161.1 hypothetical protein PHYSODRAFT_510137 [Phytophthora sojae]) HSP 1 Score: 66.2 bits (160), Expect = 1.300e-7 Identity = 58/205 (28.29%), Postives = 101/205 (49.27%), Query Frame = 0 Query: 1 MSRSVEATRRRLNEERMSN--------DMETQPGQIFTSSSSSQPGQEPPPGHQTLEIELDSPLKRNFKALLVLAVSVYGLREAKLLENLLWNKRVGSTALAVAVAASSVFVLLWAYLDVYVGTVQGQKVGYPEARRVTHTLLLSLLLTLVSLTVAIWPVYQAAALVYVCMVSYGVMFQVVILLPASVYNPLFFCAYAGFVYMWI 198 M+ E T RR + R+ + D ET P +SS++ Q+ ++ LD +L L V+ GL EA+ + LL + + V +S+ L AY++VY G + G++V Y A+ TH +L S+L + L V +WPV++ L Y+ M S+GV+ Q++++LP + +F Y F++ ++ Sbjct: 2 MTMEQEVTPRRPHSARVGDSDDADELMDKETDPMVSAAPNSSARRAQQ---AESWVQFVLD-----RIWSLAFLGVASLGLYEAEFVPELLQAPHARREFVHLGVLFASLLGLFGAYIEVYRGMILGERVHYATAKTATHGMLASMLASGFCLAVGMWPVWRWLTLPYLFMWSWGVVVQLLVILPPLLQRVVFVGGYLWFMHAYL 198
BLAST of NO12G00900 vs. NCBI_GenBank
Match: GAY06770.1 (Hypothetical protein PINS_014574 [Pythium insidiosum]) HSP 1 Score: 65.9 bits (159), Expect = 1.700e-7 Identity = 36/138 (26.09%), Postives = 77/138 (55.80%), Query Frame = 0 Query: 60 FKALLVLAVSVYGLREAKLLENLLWNKRVGSTALAVAVAASSVFVLLWAYLDVYVGTVQGQKVGYPEARRVTHTLLLSLLLTLVSLTVAIWPVYQAAALVYVCMVSYGVMFQVVILLPASVYNPLFFCAYAGFVYMWI 198 F + V+ GL EA+ ++ +L+ + + + + +S+ +L +Y+++Y G+KV Y +A+ TH +L+S++L V + +WPV+ + Y+ M +GV+ Q+V++ P + +F AY F++ ++ Sbjct: 64 FWPTVFFTVAAVGLYEARFVQRVLYAEHANRLFVNLFILCASMVMLFGSYIELYRNFFLGEKVTYEKAKTSTHGMLVSMMLAGVCFCIGMWPVWHWLTIPYLFMWFWGVIVQIVVIFPVQLQRVIFMGAYLWFMHSYL 201
BLAST of NO12G00900 vs. NCBI_GenBank
Match: GAX93278.1 (Hypothetical protein PINS_001169 [Pythium insidiosum]) HSP 1 Score: 65.9 bits (159), Expect = 1.700e-7 Identity = 36/138 (26.09%), Postives = 77/138 (55.80%), Query Frame = 0 Query: 60 FKALLVLAVSVYGLREAKLLENLLWNKRVGSTALAVAVAASSVFVLLWAYLDVYVGTVQGQKVGYPEARRVTHTLLLSLLLTLVSLTVAIWPVYQAAALVYVCMVSYGVMFQVVILLPASVYNPLFFCAYAGFVYMWI 198 F + V+ GL EA+ ++ +L+ + + + + +S+ +L +Y+++Y G+KV Y +A+ TH +L+S++L V + +WPV+ + Y+ M +GV+ Q+V++ P + +F AY F++ ++ Sbjct: 64 FWPTVFFTVAAVGLYEARFVQRVLYAEHANRLFVNLFILCASMVMLFGSYIELYRNFFLGEKVTYEKAKTSTHGMLVSMMLAGVCFCIGMWPVWHWLTIPYLFMWFWGVIVQIVVIFPVQLQRVIFMGAYLWFMHSYL 201
BLAST of NO12G00900 vs. NCBI_GenBank
Match: POM71665.1 (Hypothetical protein PHPALM_11735 [Phytophthora palmivora var. palmivora]) HSP 1 Score: 65.1 bits (157), Expect = 2.800e-7 Identity = 40/132 (30.30%), Postives = 72/132 (54.55%), Query Frame = 0 Query: 66 LAVSVYGLREAKLLENLLWNKRVGSTALAVAVAASSVFVLLWAYLDVYVGTVQGQKVGYPEARRVTHTLLLSLLLTLVSLTVAIWPVYQAAALVYVCMVSYGVMFQVVILLPASVYNPLFFCAYAGFVYMWI 198 L V+ GL EA + +LL + + + + S+ L Y++VY + G+ V Y A+ TH +LLS+L + L + +WPV+ L Y+ M S+GV+ Q++++LP + +F AY F++ ++ Sbjct: 59 LTVASLGLYEASFVSDLLHAPHANRSFVHLGIFFGSLLGLFGCYIEVYRSMILGEHVHYESAKTATHGMLLSMLASGFCLAIGMWPVWHWLTLPYLFMWSWGVVVQLLVILPPLLQRLVFVGAYIWFMHAYL 190
BLAST of NO12G00900 vs. NCBI_GenBank
Match: POM77911.1 (Hypothetical protein PHPALM_4632 [Phytophthora palmivora var. palmivora]) HSP 1 Score: 64.7 bits (156), Expect = 3.700e-7 Identity = 40/132 (30.30%), Postives = 72/132 (54.55%), Query Frame = 0 Query: 66 LAVSVYGLREAKLLENLLWNKRVGSTALAVAVAASSVFVLLWAYLDVYVGTVQGQKVGYPEARRVTHTLLLSLLLTLVSLTVAIWPVYQAAALVYVCMVSYGVMFQVVILLPASVYNPLFFCAYAGFVYMWI 198 L V+ GL EA + +LL + + + + S+ L Y++VY + G+ V Y A+ TH +LLS+L + L + +WPV+ L Y+ M S+GV+ Q++++LP + +F AY F++ ++ Sbjct: 59 LTVASLGLYEASFVSDLLHAPHANRSFVHLGIFFGSLLGLFGCYIEVYRSMILGEVVHYESAKTATHGMLLSMLASGFCLAIGMWPVWHWLTLPYLFMWSWGVVVQLLVILPPLLQRLVFVGAYIWFMHAYL 190 The following BLAST results are available for this feature:
BLAST of NO12G00900 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 9
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO12G00900 ID=NO12G00900|Name=NO12G00900|organism=Nannochloropsis oceanica|type=gene|length=1133bpback to top protein sequence of NO12G00900.1 >NO12G00900.1-protein ID=NO12G00900.1-protein|Name=NO12G00900.1|organism=Nannochloropsis oceanica|type=polypeptide|length=199bpback to top Synonyms
Publications
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