NO12G00820, NO12G00820 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO12G00820 vs. NCBI_GenBank
Match: EWM25941.1 (hypothetical protein Naga_100469g5 [Nannochloropsis gaditana]) HSP 1 Score: 808.9 bits (2088), Expect = 9.900e-231 Identity = 394/567 (69.49%), Postives = 444/567 (78.31%), Query Frame = 0 Query: 1 MRRTLRVCLALLSSLSVISQSHGQKLRRQTNADALQGMEELTLDDGYDAISEVEIDSEGGAFIAAPTYGVENERVIPASAASXXXXXXXXXXXXXXXXXXXXXXXXXPPGEDQDKREAIEWDVDTNDTPRGITWPHCYFHAKYAMNYTAFGLIDPNAVYWGQLVRGSGANVAYKFKGKFPKSIYFSYQVYASQQSAEPDQKITDMNVKPLWGQNPFSNGSITPDETGGYEVYFTPSGQEGYTNELRLPSNPVNQLILRMYKVDPSLPPSTSIIDLEPPTMYMAHDMGEGKREWRALPRCSAHEEKLLADLSNIFYEIQYPRSSGTEGYGVIPVLRDMNCPMNPSKGNVSFVLFQGDWLDPSLAIARQSIDSPYMMYCINPYNDWTYYLNTLLKVRFKLPTLANALFSDIKVANVGEYEVRYVSMSTADGFFPTIASIDGKGMERFYN----RNSSWDGWVEIRVALNEQKARDCGFWSDDAIFLPLESAQVHPAKSIVMFYRSILAKGPKSAGAASKACGSGALCGNPPFLRSIMQDQYPELEVYHCDECAGKAPVVTRYADYFQGH 564 MRRTLR + LL S+ S QKL R T+AD+ + + ++ D + +V +D + GAF +PT G A A P + DKR AIEWDVDTN+ RG +WPHCY+HAKYA+NYT FGLIDPNAVYWGQLVRGSGANVAYK KG+FPKSIYFS+QVYASQ SA PDQKITD +VKPLWG NPFSN TP++ GGYEVY TPSG+EGY NELRLP+ +NQLILRMYK DP L PS SIIDLEPPT+YMAHDMGEGKREWRALPRCSA +EKLLADLSN +YEIQYP ++GTEG GVIP+LR+MNCPMNP+KGNVSFVLFQGDWL P LAIARQS DSPYMMYCINPYNDW +YLNTLLK+RFKLP +A+ LFS I+VANVG+YEVRY+SMSTADGF+PTIASIDG+GM+RFYN NSSWDGWVEIRVALNE KAR C FWSD AIFLPLE VHPAKSIV+F RSILA GPKSAGAASKACG+ ALCGNPPF+RSIMQ+QYPELEVYHCD C GK P+VTRY DYF+ H Sbjct: 1 MRRTLRAMVGLLCFTSISSLGQSQKLLRSTDADSSEDQDTNSMRDSTNTKDQVIVDLD-GAF--SPTRG--------ADRAEGRAKTPKIRSTVGSPDRPPVAALQFPTVDQDDKRAAIEWDVDTNEVARGYSWPHCYWHAKYAINYTHFGLIDPNAVYWGQLVRGSGANVAYKMKGRFPKSIYFSWQVYASQTSAAPDQKITDFHVKPLWGTNPFSNPDATPEDMGGYEVYLTPSGEEGYVNELRLPNATINQLILRMYKPDPILGPSISIIDLEPPTLYMAHDMGEGKREWRALPRCSAAKEKLLADLSNAWYEIQYPHATGTEGRGVIPILREMNCPMNPTKGNVSFVLFQGDWLPPELAIARQSQDSPYMMYCINPYNDWRHYLNTLLKIRFKLPVIADGLFSGIRVANVGDYEVRYLSMSTADGFYPTIASIDGRGMQRFYNYSSAGNSSWDGWVEIRVALNEAKARACNFWSDQAIFLPLEVEDVHPAKSIVLFLRSILAHGPKSAGAASKACGNSALCGNPPFIRSIMQEQYPELEVYHCDSCEGKPPLVTRYEDYFKNH 556
BLAST of NO12G00820 vs. NCBI_GenBank
Match: EWM29475.1 (hypothetical protein Naga_100128g9 [Nannochloropsis gaditana]) HSP 1 Score: 131.7 bits (330), Expect = 7.000e-27 Identity = 115/452 (25.44%), Postives = 192/452 (42.48%), Query Frame = 0 Query: 134 WPHCYFHAKYAMNYTAFGLIDPNAVYWGQLVR-GSGANVAYKFKGKFPKSIYFSYQVYASQQSAEPDQKITDMNVKPLWGQNPFSNGSITPDETGGYEVYFTPSGQEGYTNELRLPSNP---------------VNQLILRMYKVDPSLPPSTSIIDLEPPTMYMAHDMGEGKREWRALPRCSAHEEKLLADLSNIFYEIQYPRSSGTEGYGVIPVLRDMNCPMNPSKGNVSFVLFQGDW--LDPSLAIARQSIDSPYMMYCINPYNDWTYYLNTLLKVRFKLPTLANALFSDIK-VANVGEYEVRYVSMSTADGFF--PTIASIDGKGMERFYNRNSSWDGWVEIRVALNEQKARDCGFWSDDAIFLPLESAQV--HPAKSIVMFYRSILAK--------GPKSAGAASKACGSGALCGNPPFLRSIMQDQYPELEVYHCDECAG-KAPVV 554 +P C + A + L+DPNAVY QL+ + + YK FP+ +YFSY+ Y+ + P + D+ + P WG+NP+ T + G YE+Y T G +G+ NE+R S V+ L + M ++ + P + ++ P + D+G+ W+ L CS D + Q+ R+ G+ V + ++++ W L ++++ D P + +N N ++ + P A LF + V NV Y RY S + AD F PT +S+ + ME FY + WD +I A + + CG A+FLP ++ + +P + R +LA+ +S + CG C + F+++ + DQYP L+VY CD G K P V Sbjct: 15 YPFCAWDATTDESIYTPLLLDPNAVYQPQLLSFAAHPHRVYKISASFPRVVYFSYETYSLR--GHPLTSLPDLRIDPSWGKNPYRE-ETTEEGAGTYEIYVTRDGNKGWPNEVRGLSEDHTNATQAAFSRVMDFVDNLSVVMLRLYTTEQPPSVWGGVDRPVISYTDDLGQ---TWKELQPCS--------DTT----RYQFNRAMRQIGWTVY---------------DFRYLIYHSQWYRLRSCHLLSKREADHPALFPDVNVQLGG----NFVMVIEGTAPLTATGLFEGPRPVWNVTNYSTRYWSFAAADVFVPGPTYSSLTAQDMENFYGK--GWDRRYKIVGATSIDIVKACGLDDPHALFLPYKNELMNNNPPAVPAVIEREMLARHMAMGLPSDKQSIEYVTSNCGKENKCLSIDFMKASLGDQYPSLQVYTCDVATGIKTPFV 427
BLAST of NO12G00820 vs. NCBI_GenBank
Match: EWM21339.1 (hypothetical protein Naga_100075g21 [Nannochloropsis gaditana]) HSP 1 Score: 110.2 bits (274), Expect = 2.200e-20 Identity = 100/404 (24.75%), Postives = 177/404 (43.81%), Query Frame = 0 Query: 173 YKFKGKFPKSIYFSYQVY-ASQQSAEPDQKITDMNVKPLWGQNPFSNGSITPDETGGYEVYFTPSGQEGYTNELRL----PSNPVNQLILRMYKVDPSLPPSTSIIDLE--PPTMYMAHDMGEGKREWRALPRCS----AHEEKLLADLSNIFYEIQYPRSSGTEGYGVIPVLRDMNCPMNPSKGNVSFVLFQGDWLDPSL--AIARQSIDSPYMMYCINPYNDWTYYLNTLLKVRFKLPTLANALFSDIKVANVGEYEVRYVSMSTADG--FFPTIASIDGKGMERFYNRN---SSWDGWVEIRVALNEQKARDCGFWS---DDAIFLPLESAQVHPAKSIVMFYRSILAKGPK----SAGAAS----KACGSGA---LCGNPPFLRSIMQDQYPELEVYHCD 545 Y+ +GKFP YFS+ VY AS QS + D +++P G+NPF++ +T D G YE+Y + G +GY NE+ ++P L R+ +DP S + E M + + EW + RCS A E+++ +L ++ + +P+ N + F LF + +P + +A ++ + Y+ +C+ Y ++++ KLP LF DI+VA+ Y+ RYVS ++AD +P+ +I + + Y+ + S WD + + A+ CG ++ D + L H + R +L G K + G A+ C S LC + ++Q+ YP ++++ CD Sbjct: 159 YRIRGKFPYVRYFSFTVYDASLQSI---STLHDTDIRPSSGKNPFNDIEVTEDNMGTYEIYVSKDGSKGYPNEMAALRPDSTSPYALLAFRLQLLDPRAGEDRSGKNREWGYVDMPLVEILNHRNGEWDIIRRCSDEFQARTEEVIENL-DLTFNTWWPK----------------NLQIGTECNATEFSLFDPE-QNPIIRRGVAVRNANENYIFWCMPKEIGKKDY---IIRITGKLPRTPYGLFDDIRVADTARYDSRYVSFTSADAIPLYPSYETIHDRDIFNHYSTDPFGSDWDRMYNLVATSDVNLAKKCGLYNRAEDVLLQLTRSPTFTHLPHVPAIVMRHLLPGGGKERRGTEGVANVNLRNECESPTGKLLCDPARSAKVLLQEFYPLVQIWTCD 538
BLAST of NO12G00820 vs. NCBI_GenBank
Match: XP_005855631.1 (hypothetical protein NGA_0673800 [Nannochloropsis gaditana CCMP526] >EKU20720.1 hypothetical protein NGA_0673800 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 94.7 bits (234), Expect = 9.500e-16 Identity = 108/445 (24.27%), Postives = 183/445 (41.12%), Query Frame = 0 Query: 154 DPNAVYWGQLVRGSGANVAYKFKGKFPKS--IYFSYQVYASQQSAEPDQKITDMNVK---PLWGQNPFSNGSITPDETGGYEVYFTPSGQEGYTNELRL-PSNPVNQ--------LILRMYKVDPSLPPSTSIIDLEPPTM--------YMAHDMGEGKR-----------EWRALPRCSAHEEKLLADLSNIFYEIQYPRSSGTEGYGVIPVLRDMNCPMNPSKGNVSFVLFQGDWLDPSLAIARQSIDSPYMM---YCINPYNDWTYYLNTLLKVRFKLPTLANALFSDIKVANVGEYEVRYVSMSTAD--GFFPTIASIDGKGMERFYN----RNSSWDGWVEIRVALNEQKARDCGFW--SDDAIFLPLESAQVHPAKSIVMFYRSILAK------GPKSAGAASKACGSGA---LCGNPPFLRSIMQDQYPELEVYHCDE 546 D A+Y ++ + ++ +G FP+ YFS Q + P I D ++ P +NPF+ S P G Y + TP G +G NEL L P + ++ +++R Y DP PP +S D PP Y M E ++ WR P C + L + + YG+IP P+ +K N +FVL+ G+ D + A ++D+ Y++ + ++P + +V LP + LF+D K+AN + +VRY+S S+ PT+ ++D RFY +W+ A E R CG + S + + ++ I+ R ++ K +S G A C + C +P +L+++M+D YP ++ Y CD+ Sbjct: 151 DLQAIYQVLVMLKTTEKNIFRVRGSFPQEGVRYFSLQ-SNNVDVGFPISTIKDYEIEVDDPENTRNPFAEDSDRP--IGTYTINVTPRGDQGLKNELSLCPESMTDRQCRSVNAVMLMRFYTSDPDRPPVSSKTD--PPASQPNDRLFGYATPPMVEERQFKSWTDDRSRDRWRVFPTCDQTRSTQVTSLISKHF------------YGMIPPFAP---PVRHNKNN-NFVLYLGE--DTATAGVYPNLDAAYLLAVAWQLSPELKDKPKKRLMARVTGTLPVTSRNLFTDPKIANYKDADVRYMSFSSIALVSGGPTMDTLDDAAFLRFYEPQQPEGEAWNRSYSFVAA--EDPERTCGLYNASQELFLSTVLDGKLQDYWGIL--DRQLIPKTQRTRLPDRSNGYARLQCADASALDACVDPDYLKNVMEDYYPRIQWYTCDQ 568
BLAST of NO12G00820 vs. NCBI_GenBank
Match: EWM30096.1 (hypothetical protein Naga_100193g4 [Nannochloropsis gaditana]) HSP 1 Score: 93.2 bits (230), Expect = 2.800e-15 Identity = 105/426 (24.65%), Postives = 176/426 (41.31%), Query Frame = 0 Query: 173 YKFKGKFPKS--IYFSYQVYASQQSAEPDQKITDMNVK---PLWGQNPFSNGSITPDETGGYEVYFTPSGQEGYTNELRL-PSNPVNQ--------LILRMYKVDPSLPPSTSIIDLEPPTM--------YMAHDMGEGKR-----------EWRALPRCSAHEEKLLADLSNIFYEIQYPRSSGTEGYGVIPVLRDMNCPMNPSKGNVSFVLFQGDWLDPSLAIARQSIDSPYMM---YCINPYNDWTYYLNTLLKVRFKLPTLANALFSDIKVANVGEYEVRYVSMSTAD--GFFPTIASIDGKGMERFYN----RNSSWDGWVEIRVALNEQKARDCGFW--SDDAIFLPLESAQVHPAKSIVMFYRSILAK------GPKSAGAASKACGSGA---LCGNPPFLRSIMQDQYPELEVYHCDE 546 ++ +G FP+ YFS Q + P I D ++ P +NPF+ S P G Y + TP G +G NEL L P + ++ +++R Y DP PP +S D PP Y M E ++ WR P C + L + + YG+IP P+ +K N +FVL+ G+ D + A ++D+ Y++ + ++P + +V LP + LF+D K+AN + +VRY+S S+ PT+ ++D RFY +W+ A E R CG + S + + ++ I+ R ++ K +S G A C + C +P +L+++M+D YP ++ Y CD+ Sbjct: 10 FRVRGSFPQEGVRYFSLQ-SNNVDVGFPISTIKDYEIEVDDPENTRNPFAEDSDRP--IGTYTINVTPRGDQGLKNELSLCPESMTDRQCRSVNAVMLMRFYTSDPDRPPVSSKTD--PPASQPNDRLFGYATPPMVEERQFKSWTDDRSRDRWRVFPTCDQTRSTQVTSLISKHF------------YGMIPPFAP---PVRHNKNN-NFVLYLGE--DTATAGVYPNLDAAYLLAVAWQLSPELKDKPKKRLMARVTGTLPVTSRNLFTDPKIANYKDADVRYMSFSSIALVSGGPTMDTLDDAAFLRFYEPQQPEGEAWNRSYSFVAA--EDPERTCGLYNASQELFLSTVLDGKLQDYWGIL--DRQLIPKTQRTRLPDRSNGYARLQCADASALDACVDPDYLKNVMEDYYPRIQWYTCDQ 408
BLAST of NO12G00820 vs. NCBI_GenBank
Match: XP_005856101.1 (hypothetical protein NGA_0332100 [Nannochloropsis gaditana CCMP526] >EKU20237.1 hypothetical protein NGA_0332100 [Nannochloropsis gaditana CCMP526] >EWM25879.1 hypothetical protein Naga_100054g15 [Nannochloropsis gaditana]) HSP 1 Score: 67.8 bits (164), Expect = 1.200e-7 Identity = 92/409 (22.49%), Postives = 154/409 (37.65%), Query Frame = 0 Query: 173 YKFKGKFPKSIYFSYQVYA-SQQSAEPDQKITDMNVKPLWGQNPFSNGSITPDETGGYEVYFTPSGQEGYTNELR--LPSNPVNQL--ILRMYKVDPSLPPSTSIIDLEPPTMYMAHDMGEGKRE--WRALPRCSAHEEKLLADLSNIFYEIQYPRSSGTEGYGVIPVLRDMNCPMNPSKGNVSFVLFQGDWLDPSLAIARQSIDSPYMMYCINPYNDWTYY----------LNTLLKV--RFKLPTLANALFSDIKVANVGEYEVRYVSMSTADGFFP--TIASIDGKGMERFYNRNSSWDGWVEIRVALNEQKARDCGFWSDDAIFLPLESAQVHPA--------KSIVMFYRSILAKG-PKSAGAASKACGSGALCGNPPFLRSIMQDQYPELEVYHCDECAGKAP 552 + FKG+FPKS FSY YA + Q I+D+++ G NPF+ G +G Y++Y TP G++G+ NE++ + N+L I+ +Y+V M +G + W +P + + + +++ + P NP K +++ F ++ LA+ D N N++ YY N ++ R LP A+ + + I + RY S+S + + P + S+ + + FY I +A N+ CG LP QV+ A + YR ++ G +S AC + C NP F M D YP + C +G AP Sbjct: 219 FNFKGEFPKSRAFSYATYAVANQQVSFVDMISDVDMVASTGSNPFTAGPGNTGASGSYDLYVTPDGKQGFPNEIKTFADGDVTNELSGIIIVYRV----------------------IMADGIKSDGWGGVPPPALRVKAFSVLATGLWFNL---------------------APCNP-KNDITIENF----IENRLALKEGMSDVKVECDVFNMDNNFVYYDDAQYFKTPDENHIISCGNRALLPPGAD-MITIISGTLPPASDSRYASISLVNLYPPGRNVYSVSDQSLRNFYWDQGKSAVNYTIIMAKNKLALNKCGLSK-----LPANWYQVYWAGFADALEGSYPGIVYREMMTDGYEQSLEQVRYACEAEKDCSNPKFFEQQMGDYYPRISYLSCSS-SGLAP 572 The following BLAST results are available for this feature:
BLAST of NO12G00820 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 6
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO12G00820 ID=NO12G00820|Name=NO12G00820|organism=Nannochloropsis oceanica|type=gene|length=3811bpback to top protein sequence of NO12G00820.1 >NO12G00820.1-protein ID=NO12G00820.1-protein|Name=NO12G00820.1|organism=Nannochloropsis oceanica|type=polypeptide|length=564bpback to top Synonyms
Publications
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