NO12G00740, NO12G00740 (gene) Nannochloropsis oceanica

Overview
NameNO12G00740
Unique NameNO12G00740
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3114
Alignment locationchr12:255415..258528 -

Link to JBrowse

Properties
Property NameValue
Description3-hydroxyisobutyrate dehydrogenase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr12genomechr12:255415..258528 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0051287NAD binding
GO:0004616phosphogluconate dehydrogenase (decarboxylating) activity
GO:0003824catalytic activity
GO:0000166nucleotide binding
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0008152metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR0089276-PGluconate_DH_C-like
IPR036291NAD(P)-bd_dom_sf
IPR029154NADP-bd
IPR0061156PGDH_NADP-bd
Homology
[Close]
BLAST of NO12G00740 vs. NCBI_GenBank
Match: EWM25945.1 (3-hydroxyisobutyrate dehydrogenase [Nannochloropsis gaditana])

HSP 1 Score: 471.5 bits (1212), Expect = 2.100e-129
Identity = 230/294 (78.23%), Postives = 261/294 (88.78%), Query Frame = 0 
Query:   12 IAPGTTRIGWVGVGIMGCSMVSHLLGAGYHCTIYNRSPSKCIPSKAKGAVIATSPKAVAEQADVVFVIVGFPTDVREVVLGHDGVFAGLKRGGVLIDCTTSTPSLAQEIYTQGQQKGVATIDAPVSGGDIGAKTAELSFMLGGDKEAVERSRPLLDLMGKNARYMGGAGSGQHTKMVNQILIANTMIGVCEGLLYAQRVGLDLTDIIAAVGAGAAGSFSINNLGPRMVRRDFAPGFYVDHFLKDLGIALEEARRMNLALPGLALANQMYVALKAQGGGRLGTQGLLLVLERLNG 306
            I+P TTRIGWVGVGIMGCSMV+HLL AGY CT+YNR+PSKC+P +AKGAV+A+SP AVA  +DVVFVIVGFP+DVR VVLG +G+  GLK GGVL+DCTTSTPSLAQEIYT GQ +GV+T+DAPVSGGD+GA+ A LSFM+GGDK+ V+   PL  LMGKN RYMGG G GQHTKMVNQILIANTM+GVCEGL+YA++ GLDLT+ I AVGAGAAGSFSINNLGPRMV RDFAPGFYV+HFLKDLGIAL+EARRM+LA+PG+A A QMYVALKAQGGGRLGTQ LLL LERLNG
Sbjct:    9 ISPATTRIGWVGVGIMGCSMVTHLLNAGYQCTVYNRTPSKCLPVQAKGAVVASSPHAVAAASDVVFVIVGFPSDVRNVVLGTEGILKGLKAGGVLVDCTTSTPSLAQEIYTTGQAQGVSTVDAPVSGGDVGARNAALSFMVGGDKQVVDGLHPLWTLMGKNMRYMGGPGKGQHTKMVNQILIANTMMGVCEGLMYAEKAGLDLTETINAVGAGAAGSFSINNLGPRMVARDFAPGFYVEHFLKDLGIALDEARRMDLAVPGMAAAYQMYVALKAQGGGRLGTQALLLALERLNG 302
[Close]
BLAST of NO12G00740 vs. NCBI_GenBank
Match: OAO18007.1 (3-hydroxyisobutyrate dehydrogenase [Blastocystis sp. ATCC 50177/Nand II])

HSP 1 Score: 392.5 bits (1007), Expect = 1.200e-105
Identity = 187/296 (63.18%), Postives = 238/296 (80.41%), Query Frame = 0 
Query:   12 IAPGTTRIGWVGVGIMGCSMVSHLLGAGYHCTIYNRSPSKCIPSKAKGAVIATSPKAVAEQADVVFVIVGFPTDVREVVLGHDGVFAGLKRGGVLIDCTTSTPSLAQEIYTQGQQKGVATIDAPVSGGDIGAKTAELSFMLGGDKEAVERSRPLLDLMGKNARYMGGAGSGQHTKMVNQILIANTMIGVCEGLLYAQRVGLDLTDIIAAVGAGAAGSFSINNLGPRMVRRDFAPGFYVDHFLKDLGIALEEARRMNLALPGLALANQMYVALKAQGGGRLGTQGLLLVLERLNGLQ 308
            I+P TTR+GWVG G+MG SM  H++  GY CT+YNR+ SKC P  AKGA +A SP  VA+ +D+VF IVG+P+DVRE+ LG  G+  GLK+GG+ +D TTS PSLAQEI    ++KG  ++DAPVSGGDIGA+  +LS M+GGDK   +   PL   MG N +YMGGAG GQHTKMVNQILI+  MIGVCEGLLY  + GL+L ++IAAVGAGAAGS+SINNLGPRM++R+F PGF+VDHF+KD+GIAL+EA+RMNL+LPGLALANQ+Y+++KAQG G+LGTQ L+L LE +NG++
Sbjct:   14 ISPKTTRVGWVGTGVMGKSMCQHIIDNGYQCTVYNRTLSKCDPLIAKGAKLAKSPIEVAQNSDIVFSIVGYPSDVREITLGEKGILKGLKKGGIYVDMTTSQPSLAQEINAVCKEKGFNSLDAPVSGGDIGARDGKLSIMVGGDKNVFDDVIPLFKCMGTNIKYMGGAGCGQHTKMVNQILISTMMIGVCEGLLYGYKAGLNLDEVIAAVGAGAAGSWSINNLGPRMIKRNFDPGFFVDHFIKDMGIALDEAKRMNLSLPGLALANQLYLSVKAQGNGKLGTQALMLALESMNGMK 309
[Close]
BLAST of NO12G00740 vs. NCBI_GenBank
Match: XP_014525620.1 (3-hydroxyisobutyrate dehydrogenase [Blastocystis sp. subtype 4] >KNB42177.1 3-hydroxyisobutyrate dehydrogenase [Blastocystis sp. subtype 4])

HSP 1 Score: 391.3 bits (1004), Expect = 2.700e-105
Identity = 191/295 (64.75%), Postives = 239/295 (81.02%), Query Frame = 0 
Query:   14 PGTTRIGWVGVGIMGCSMVSHLLGAGYHCTIYNRSPSKCIPSKAKGAVIATSPKAVAEQADVVFVIVGFPTDVREVVLGHDGVFAGLKRGGVLIDCTTSTPSLAQEIYTQGQQKGVATIDAPVSGGDIGAKTAELSFMLGGDKEAVERSRPLLDLMGKNARYMGGAGSGQHTKMVNQILIANTMIGVCEGLLYAQRVGLDLTDIIAAVGAGAAGSFSINNLGPRMVRRDFAPGFYVDHFLKDLGIALEEARRMNLALPGLALANQMYVALKAQGGGRLGTQGLLLVLERLNGLQQ 309
            P  T+IG+VG+G+MG SM  +L+  GY  TIYNRSP KC    A+GA IA+SPK VAE +DVVF IVGFP DVREV +G  G+ AGL  GG+++D TTS PSLA EIY Q ++KGV ++DAPVSGGD+GA+ A+LS M+GGDK+  E+  PL   MG N +YMG AG GQHTKMVNQILIA  MIGVCEGL+Y  + GL+L ++IAAVGAGAAGS+SINNLGPRMV R+F PGF+V+HF+KD+GIAL+EA+RMNL+LPGLALANQ+Y+A+KAQG G+LGTQ LLL LE+++G+ +
Sbjct:    3 PENTKIGFVGIGVMGKSMCRNLMKNGYQATIYNRSPEKCQELAAEGAKIASSPKEVAENSDVVFSIVGFPNDVREVTIGESGILAGLHEGGIMVDMTTSQPSLAVEIYEQAKKKGVYSLDAPVSGGDVGARDAKLSIMVGGDKDIYEKMIPLFKCMGTNIKYMGEAGCGQHTKMVNQILIATNMIGVCEGLIYGYKAGLNLDEVIAAVGAGAAGSWSINNLGPRMVVRNFNPGFFVEHFIKDMGIALDEAKRMNLSLPGLALANQLYLAVKAQGHGKLGTQSLLLALEQMSGITE 297
[Close]
BLAST of NO12G00740 vs. NCBI_GenBank
Match: OAO16288.1 (3-hydroxyisobutyrate dehydrogenase/2-hydroxy-3-oxopropionate reductase [Blastocystis sp. ATCC 50177/Nand II])

HSP 1 Score: 388.3 bits (996), Expect = 2.300e-104
Identity = 188/293 (64.16%), Postives = 236/293 (80.55%), Query Frame = 0 
Query:   14 PGTTRIGWVGVGIMGCSMVSHLLGAGYHCTIYNRSPSKCIPSKAKGAVIATSPKAVAEQADVVFVIVGFPTDVREVVLGHDGVFAGLKRGGVLIDCTTSTPSLAQEIYTQGQQKGVATIDAPVSGGDIGAKTAELSFMLGGDKEAVERSRPLLDLMGKNARYMGGAGSGQHTKMVNQILIANTMIGVCEGLLYAQRVGLDLTDIIAAVGAGAAGSFSINNLGPRMVRRDFAPGFYVDHFLKDLGIALEEARRMNLALPGLALANQMYVALKAQGGGRLGTQGLLLVLERLNGL 307
            P  TRIG+VG+G+MG SM  +++  GY  TIYNR+  KC    A+GAV+A +P+ VAE +D+VF IVGFP DVREV  G  G+ AGLK GG+++D TTS PSLA EIY  G++KG+A++DAPVSGGDIGA+ A+LS M+GGDKE  E+  PL   MG N +YMG AG GQHTKM NQILIA  MIGVCE L+Y  + GL+L ++IAAVGAGAAGS+SINNLGPRM+ R+F PGF+V+HF+KD+GIALEEA+RM+L+LPGLALANQ+Y+A+KAQG G+LGTQ LLL LE++NGL
Sbjct:    3 PENTRIGFVGIGVMGKSMCRNMMKKGYKATIYNRTAEKCQELAAEGAVVANTPREVAEHSDIVFTIVGFPQDVREVYFGEKGILAGLKEGGIVVDMTTSQPSLAVEIYEAGKKKGIASLDAPVSGGDIGARDAKLSIMVGGDKEIFEKVTPLFQCMGTNLKYMGKAGCGQHTKMCNQILIATNMIGVCESLIYGYKAGLNLEEVIAAVGAGAAGSWSINNLGPRMLVRNFNPGFFVEHFIKDMGIALEEAKRMDLSLPGLALANQLYIAVKAQGHGKLGTQSLLLALEQMNGL 295
[Close]
BLAST of NO12G00740 vs. NCBI_GenBank
Match: XP_008620466.1 (3-hydroxyisobutyrate dehydrogenase [Saprolegnia diclina VS20] >EQC26099.1 3-hydroxyisobutyrate dehydrogenase [Saprolegnia diclina VS20])

HSP 1 Score: 384.0 bits (985), Expect = 4.400e-103
Identity = 192/291 (65.98%), Postives = 235/291 (80.76%), Query Frame = 0 
Query:   18 RIGWVGVGIMGCSMVSHLLGAGYHCTIYNRSPSKCIPSKAKGAVIATSPKAVAEQADVVFVIVGFPTDVREVVLGHDGVFAGLKRGGVLIDCTTSTPSLAQEIYTQGQQKGVATIDAPVSGGDIGAKTAELSFMLGGDKEAVERSRPLLDLMGKNARYMGGAGSGQHTKMVNQILIANTMIGVCEGLLYAQRVGLDLTDIIAAVGAGAAGSFSINNLGPRMVRRDFAPGFYVDHFLKDLGIALEEARRMNLALPGLALANQMYVALKAQ-GGGRLGTQGLLLVLERLNGLQ 308
            R+G++G GIMG SM  H+L AGY  T+Y+R+PSKC    AKGA  A +P AVA Q+DVVF IVG+P+DVR+V+LG  GV + L  GG+++D TTS PSLA+EIY   Q KGV+ IDAPVSGGD+GAK A LS M+GGD  A+E+  PL ++MGKN R+MGGAG+GQHTKMVNQILIA  MIGV EGLLYA + GLDL + IAAVGAGAAGS+SINN+GPR+ RRDF PGF V+HFLKDLGIAL+E++ M LALPGLALANQ+Y+A++AQ  GG+LGTQ L+L LERLN +Q
Sbjct:    2 RVGFIGTGIMGKSMCEHILNAGYAVTVYSRTPSKCDSLVAKGATYAPTPAAVAAQSDVVFTIVGYPSDVRQVILGDQGVLSTLSPGGIVVDMTTSEPSLAKEIYAAAQAKGVSAIDAPVSGGDVGAKEARLSIMVGGDAAALEKVMPLFNVMGKNIRHMGGAGAGQHTKMVNQILIATNMIGVVEGLLYAHKAGLDLNEAIAAVGAGAAGSWSINNMGPRIARRDFNPGFMVEHFLKDLGIALKESQAMGLALPGLALANQLYLAVQAQTNGGKLGTQALMLALERLNCIQ 292
[Close]
BLAST of NO12G00740 vs. NCBI_GenBank
Match: XP_012895414.1 (uncharacterized protein [Blastocystis hominis] >CBK21366.2 unnamed protein product [Blastocystis hominis])

HSP 1 Score: 380.6 bits (976), Expect = 4.800e-102
Identity = 184/282 (65.25%), Postives = 227/282 (80.50%), Query Frame = 0 
Query:   27 MGCSMVSHLLGAGYHCTIYNRSPSKCIPSKAKGAVIATSPKAVAEQADVVFVIVGFPTDVREVVLGHDGVFAGLKRGGVLIDCTTSTPSLAQEIYTQGQQKGVATIDAPVSGGDIGAKTAELSFMLGGDKEAVERSRPLLDLMGKNARYMGGAGSGQHTKMVNQILIANTMIGVCEGLLYAQRVGLDLTDIIAAVGAGAAGSFSINNLGPRMVRRDFAPGFYVDHFLKDLGIALEEARRMNLALPGLALANQMYVALKAQGGGRLGTQGLLLVLERLNGLQQ 309
            MG +M SHLL AGY CT+YNR+ SKC     KGA +  SP  V ++ DVVF IVG+P DVREVVLG  GV  GLK+GG+ +D TTS PSLA EIY+ G+ KG+AT+DAPVSGGDIGA+  +LS M+GGDK   E   PL   MG N +YMGG+G GQHTKMVNQILI+  MIGVCEGL+Y  + GL+L ++IAAVGAGAAGS+SINNLGPRM++R+F PGF+VDHF+KD+GIAL+EARRMNL+LPGLALANQ+Y+++KAQG G+LGTQ LLL LE +NG+++
Sbjct:    1 MGKAMCSHLLDAGYACTVYNRTLSKCDDLAKKGAKVVKSPIEVGKECDVVFSIVGYPKDVREVVLGEKGVLNGLKKGGIFVDMTTSEPSLASEIYSVGKSKGIATLDAPVSGGDIGARDGKLSIMVGGDKNTFEEVMPLFQCMGTNIKYMGGSGCGQHTKMVNQILISTMMIGVCEGLIYGYKAGLNLEEVIAAVGAGAAGSWSINNLGPRMLKRNFDPGFFVDHFIKDMGIALDEARRMNLSLPGLALANQLYLSVKAQGNGKLGTQALLLALESMNGMKE 282
[Close]
BLAST of NO12G00740 vs. NCBI_GenBank
Match: XP_012205572.1 (hypothetical protein SPRG_10533 [Saprolegnia parasitica CBS 223.65] >KDO23756.1 hypothetical protein SPRG_10533 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 380.6 bits (976), Expect = 4.800e-102
Identity = 190/293 (64.85%), Postives = 235/293 (80.20%), Query Frame = 0 
Query:   16 TTRIGWVGVGIMGCSMVSHLLGAGYHCTIYNRSPSKCIPSKAKGAVIATSPKAVAEQADVVFVIVGFPTDVREVVLGHDGVFAGLKRGGVLIDCTTSTPSLAQEIYTQGQQKGVATIDAPVSGGDIGAKTAELSFMLGGDKEAVERSRPLLDLMGKNARYMGGAGSGQHTKMVNQILIANTMIGVCEGLLYAQRVGLDLTDIIAAVGAGAAGSFSINNLGPRMVRRDFAPGFYVDHFLKDLGIALEEARRMNLALPGLALANQMYVALKAQ-GGGRLGTQGLLLVLERLNGLQ 308
            T RIG++G GIMG SM  H+L AGY  T+++R+PSKC    AKGA  A +P AVA Q+DVVF IVG+P+DVR+V+LG  GV + L  GG+++D TTS PSLA+EIY   Q KGV+ IDAP SGGD+GAK A LS M+GGD  A+E+  PL ++MGKN R+MGGAG+GQHTKMVNQILIA  MIGV EGLLYA + GLDL + IAAVGAGAAGS+SINN+GPR+ RRDF PGF V+HF+KD+GIAL+E++ M LALPGLALANQ+Y+A++AQ  GG+LGTQ L+L LERLN +Q
Sbjct:   22 TMRIGFIGTGIMGKSMCEHILNAGYTVTVFSRTPSKCDSLVAKGATYAPTPAAVAAQSDVVFTIVGYPSDVRQVILGDQGVLSTLSPGGIVVDMTTSEPSLAKEIYAAAQAKGVSCIDAPASGGDVGAKEARLSIMVGGDAAALEKVLPLFNVMGKNIRHMGGAGAGQHTKMVNQILIATNMIGVVEGLLYAHKAGLDLNEAIAAVGAGAAGSWSINNMGPRIARRDFNPGFMVEHFIKDMGIALKESQTMGLALPGLALANQLYLAVQAQANGGKLGTQALMLALERLNCIQ 314
[Close]
BLAST of NO12G00740 vs. NCBI_GenBank
Match: XP_009519215.1 (hypothetical protein PHYSODRAFT_353893 [Phytophthora sojae] >EGZ23927.1 hypothetical protein PHYSODRAFT_353893 [Phytophthora sojae])

HSP 1 Score: 377.1 bits (967), Expect = 5.300e-101
Identity = 184/301 (61.13%), Postives = 239/301 (79.40%), Query Frame = 0 
Query:   12 IAPGTTRIGWVGVGIMGCSMVSHLLGAGYHCTIYNRSPSKCIPSKAKGAVIATSPKAVAEQADVVFVIVGFPTDVREVVLGHD-GVFAGLKRGGVLIDCTTSTPSLAQEIYTQGQQKGVATIDAPVSGGDIGAKTAELSFMLGGDKEAVERSRPLLDLMGKNARYMGGAGSGQHTKMVNQILIANTMIGVCEGLLYAQRVGLDLTDIIAAVGAGAAGSFSINNLGPRMVRRDFAPGFYVDHFLKDLGIALEEARRMNLALPGLALANQMYVALKAQGGGRLGTQGLLLVLERLNGLQQKEE 312
            + P   R+GW+G G+MG SMV H+L  GY  T+YNR+ SKC   K +GA +A+SP  VA+ +D+VF IVG+P+DVR+V L  + GV + +K GGV++D TTS PSLA+EIY   +QKGV+++DAPVSGGD+GA+   LS M+GGD   VE + PL ++MGKN R+MGGAG+GQHTKMVNQILIA  MIGV EGLLYA++ GLD+ + I AV AGAAGS+SI+NLGPR+ +R+F PGF+V+HF+KD+GIAL+EA RMNL+LPGLALANQ+YVA+KAQG GRLGTQ L+L LE+LNG+    +
Sbjct:    5 VKPKICRVGWIGTGVMGASMVGHILKHGYEVTVYNRTLSKCEGLKEQGAQVASSPAEVAKVSDIVFGIVGYPSDVRKVFLDPEWGVLSSIKSGGVIVDMTTSEPSLAKEIYEAAKQKGVSSLDAPVSGGDVGAREGTLSIMVGGDANTVESTMPLFEIMGKNIRHMGGAGAGQHTKMVNQILIATNMIGVVEGLLYARKSGLDVEEAIRAVSAGAAGSWSISNLGPRIAKRNFDPGFFVEHFVKDMGIALKEAERMNLSLPGLALANQLYVAVKAQGHGRLGTQSLMLALEQLNGIDSSSK 305
[Close]
BLAST of NO12G00740 vs. NCBI_GenBank
Match: XP_008891837.1 (hypothetical protein PPTG_02494 [Phytophthora parasitica INRA-310] >ETI49940.1 hypothetical protein F443_06381 [Phytophthora parasitica P1569] >ETK89829.1 hypothetical protein L915_06266 [Phytophthora parasitica] >ETL43229.1 hypothetical protein L916_06203 [Phytophthora parasitica] >ETL96416.1 hypothetical protein L917_06075 [Phytophthora parasitica] >ETM49572.1 hypothetical protein L914_06198 [Phytophthora parasitica] >ETN22604.1 hypothetical protein PPTG_02494 [Phytophthora parasitica INRA-310] >ETP19719.1 hypothetical protein F441_06387 [Phytophthora parasitica CJ01A1] >ETP47642.1 hypothetical protein F442_06426 [Phytophthora parasitica P10297])

HSP 1 Score: 376.7 bits (966), Expect = 7.000e-101
Identity = 183/293 (62.46%), Postives = 237/293 (80.89%), Query Frame = 0 
Query:   18 RIGWVGVGIMGCSMVSHLLGAGYHCTIYNRSPSKCIPSKAKGAVIATSPKAVAEQADVVFVIVGFPTDVREVVLGHD-GVFAGLKRGGVLIDCTTSTPSLAQEIYTQGQQKGVATIDAPVSGGDIGAKTAELSFMLGGDKEAVERSRPLLDLMGKNARYMGGAGSGQHTKMVNQILIANTMIGVCEGLLYAQRVGLDLTDIIAAVGAGAAGSFSINNLGPRMVRRDFAPGFYVDHFLKDLGIALEEARRMNLALPGLALANQMYVALKAQGGGRLGTQGLLLVLERLNGLQQK 310
            R+GW+G G+MG SMV H+L  GY  T++NR+ SKC   K +GA +A+SP  VA+ +D+VF IVG+P+DVR+V L  + GV + +K GGV++D TTS PSLA+EIY   +QKGV+++DAPVSGGD+GA+   LS M+GGD + VE + PL ++MGKN R+MGGAG+GQHTKMVNQILIA  MIGV EGLLYAQ+ GLD+ + I AV AGAAGS+SI+NLGPR+ +R+F PGF+V+HF+KD+GIAL+EA RMNL+LPGLALANQ+YVA+KAQG GRLGT  L+L LE+LNG+  K
Sbjct:    8 RVGWIGTGVMGASMVGHILKHGYEVTVFNRTLSKCDDLKEQGATVASSPAEVAKVSDIVFGIVGYPSDVRKVFLDPEWGVLSSIKSGGVIVDMTTSEPSLAKEIYEAAKQKGVSSLDAPVSGGDVGAREGTLSIMVGGDAKTVETTMPLFEIMGKNIRHMGGAGAGQHTKMVNQILIATNMIGVVEGLLYAQKSGLDVEEAIRAVSAGAAGSWSISNLGPRIAKRNFDPGFFVEHFVKDMGIALKEAERMNLSLPGLALANQLYVAVKAQGHGRLGTHSLMLALEQLNGIDSK 300
[Close]
BLAST of NO12G00740 vs. NCBI_GenBank
Match: GAY06443.1 (3hydroxyisobutyrate dehydrogenase putative [Pythium insidiosum])

HSP 1 Score: 376.3 bits (965), Expect = 9.100e-101
Identity = 184/293 (62.80%), Postives = 235/293 (80.20%), Query Frame = 0 
Query:   18 RIGWVGVGIMGCSMVSHLLGAGYHCTIYNRSPSKCIPSKAKGAVIATSPKAVAEQADVVFVIVGFPTDVREVVLG-HDGVFAGLKRGGVLIDCTTSTPSLAQEIYTQGQQKGVATIDAPVSGGDIGAKTAELSFMLGGDKEAVERSRPLLDLMGKNARYMGGAGSGQHTKMVNQILIANTMIGVCEGLLYAQRVGLDLTDIIAAVGAGAAGSFSINNLGPRMVRRDFAPGFYVDHFLKDLGIALEEARRMNLALPGLALANQMYVALKAQGGGRLGTQGLLLVLERLNGLQQK 310
            RIGW+GVGIMG SM SH++  GY  T+YNRS +KC   + KGA +ATSP  VA+ +D+VFVIVG+P DVR V+L  H G  + +K GG++ D TTS PSLA+EIY   + KGV+T+DAPVSGGD+GA+   LS M+GGD +AV  + PL ++MGKN R+MGG G+GQHTKMVNQILIA  MIGV EGLLYA++ GLD+ + I AV AGAAGS+SI+N+GPR+ +RDF PGF+V+HFLKD+GIAL+EA RMNL+LPGLALANQ+Y+A+K+QG GRLGTQ L+L LE+LNG+  +
Sbjct:  356 RIGWIGVGIMGQSMCSHIINNGYEVTVYNRSANKCQGLREKGARVATSPAEVAQHSDIVFVIVGYPEDVRSVILDPHTGALSRMKVGGIICDMTTSEPSLAKEIYEIAKTKGVSTLDAPVSGGDVGARDGTLSIMVGGDVDAVYGAMPLFNIMGKNVRHMGGPGAGQHTKMVNQILIATNMIGVVEGLLYAKKSGLDMNEAIRAVSAGAAGSWSISNMGPRIAKRDFDPGFFVEHFLKDMGIALKEASRMNLSLPGLALANQLYLAVKSQGHGRLGTQALMLALEQLNGMSSE 648
The following BLAST results are available for this feature:
BLAST of NO12G00740 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM25945.12.100e-12978.233-hydroxyisobutyrate dehydrogenase [Nannochloropsi... [more]
OAO18007.11.200e-10563.183-hydroxyisobutyrate dehydrogenase [Blastocystis s... [more]
XP_014525620.12.700e-10564.753-hydroxyisobutyrate dehydrogenase [Blastocystis s... [more]
OAO16288.12.300e-10464.163-hydroxyisobutyrate dehydrogenase/2-hydroxy-3-oxo... [more]
XP_008620466.14.400e-10365.983-hydroxyisobutyrate dehydrogenase [Saprolegnia di... [more]
XP_012895414.14.800e-10265.25uncharacterized protein [Blastocystis hominis] >CB... [more]
XP_012205572.14.800e-10264.85hypothetical protein SPRG_10533 [Saprolegnia paras... [more]
XP_009519215.15.300e-10161.13hypothetical protein PHYSODRAFT_353893 [Phytophtho... [more]
XP_008891837.17.000e-10162.46hypothetical protein PPTG_02494 [Phytophthora para... [more]
GAY06443.19.100e-10162.803hydroxyisobutyrate dehydrogenase putative [Pythiu... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL124nonsL124Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR070ncniR070Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR006ngnoR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK009982NSK009982Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO12G00740.1NO12G00740.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|624176gene_9985Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100721g4gene4576Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO12G00740.1NO12G00740.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO12G00740 ID=NO12G00740|Name=NO12G00740|organism=Nannochloropsis oceanica|type=gene|length=3114bp
CGCCCTCGTAATGCAACATAACCCTTGATTTTCAGCTCTTGCTTTAAATA
ATGCGCACTGTCCAAAGGCGTGAAAATCATTCACTCACGTCTTTCTCCTT
TCCCCCTCATTCCTCTCCTTTCTTCCTCCTTTTCCTCCTCCACTCTCCTC
CTCTTCGCAACCACCACTCGAAACGGCCCCCCTCCCCCCTCCTCTTTCTT
CGCCTCGGGATACAGCCTATCCTCTCCCTTCCCCTCCTTCCCTCCCTCCT
CCTTCCCCCACATAAATTTCTCTTTCAGTAAATCAAAAAACTCTTCATCC
CACCTCCTCCCTGTGGTTTTTTCCACCCCAGCGGCATCCGTCCTTCCGTC
ATCATTCACGATCGCCACCTTCGTTTCCTCACCTGCCATTCCCGCCAACG
CCTCGACCAATGGCCTATACAATTGCGGGTAATACACACAATCCGCTACC
AATATCAAATCAAAATGCCTCTTTCCTGTCTCAGCGTGGAGAAGGTGAAG
CAGAGCCTTGCTTTGGGGGCCATTGCCATGCTCTAACCAGTCTAAGGGAG
AGGCGACTACTCGACAGGCACCTCTTTGCCCTCCACCCTTTTCCCCTTTT
TCCTGCCCTTTTTCGTCTCTTGGTACTTGTCTCTCCTCATTTTTTATTTT
TATATACGTATCTATTCCTCCCCCTCCTCCCACAACGGCCTTACCCATCG
CGGTAATCTCAACCGGCGGCGCCAACACTGCAGCACCACTGATTTTACCA
GCCGCAGCAGCGGCAGCAATAGCAACAGCATCATCAGGAGAAGCACCATC
CGCTACTAGCCGGGCAACTTCCACATTTCGATACAGTAAAGGCATCAAGC
ATTGCTTATCTGTCAAAGCCACAAAGGCTGGAGGCACAGGGCGCGCGAGC
GCACAAGCTAGACCCAATGCTCCAATCCCCGCGCCGACGTCCAGTACCGC
CAGCCCGCCCAGGCTTGGTGTGATTTTCTCCTGCTCAAGACATCTTTTTA
GAAAGAGGGAAGCCTTCCAGACACGTCCACCGAGAGCGTCGCGTGCGTCT
TGGAACAGAGGGATGACCATGGTGGATGGAGCTCCAAGGGGCCGCAAGGG
AAAAGGTGGAGGCAGTTGATTCTCGTCATCGAAAAGATTCTCTAAAGATG
CGACCGCATCGTCGTCCTCTTCTGGGCTGTCTGCCATTATCAGGAGAACT
GCGTTCTGTCTAAGAATATGTGCAATTTGGTGCAGAGGAAATAGGTGACT
GAAAACAGAGATGGAATCATAGCGAAAACGCAGGCGATGCCACTAACTCT
GAGCTGATATACATCCGCAACATTCTGGAAATCGCTTGCTTTTTGCTGCC
CAGACGATGACAGCTTTGAAAGATAGCGTAATCGAAATGATAATTCAATG
CCACGACACCGTACGAAAAACACTGAAAAGGCGGCGAGGATTCCGACATG
GCTGCGGCCGTTACATCGTGTGCAGCACAAGAATGCTATTGCTTGTAATG
TAATGTTTGTACTCATTGTAGAGCCAGTACGGTAGTCAGTCACCATTAGA
CTGTTTGTTTGGAATGTATTTGTGATTACCCCCAAAGGACGTGGAAAAAG
GAAACCTCCCCACCCTCTCATTCCACCCTGTATCCCTTTCCCACTTCGGG
AGCTACACTTCTCCGGCCACCTAACCCGTCCACCAATCCCATACAGAGCG
GACATGCTACCCACTCCATCAGCACCTGCCGCGCCCATCGCGCCCGGCAC
CACCCGTATCGGCTGGGTGGGCGTAGGGATCATGGGTTGCAGCATGGTGT
CCCATCTGCTCGGCGCAGGGTACCACTGCACCATCTACAACCGAAGCCCT
TCGAAATGCATTCCCTCGAAAGCTAAGGGCGCGGTCATTGCTACCTCACC
CAAAGCCGTCGCTGAGCAAGCTGACGTCGTCTTTGTCATCGTTGGCTTTC
CCACGGACGTGCGCGAGGTGGTCCTGGGGCATGATGGAGTCTTTGCGGGA
TTAAAGCGAGGGGGGGTCTTAATCGATTGCACTACCTCCACTCCGAGCCT
GGCGCAAGAGATCTACACACAAGGGCAACAAAAAGGTGTGGCCACCATTG
ATGCCCCCGTGTCGGGCGGGGACATAGGCGCCAAGACAGCGGAATTGTCA
TTTATGTTGGGGGGGGACAAAGAGGCTGTGGAGAGGTCACGGCCATTACT
TGATCTGATGGGGAAAAATGCCAGGTATATGGGAGGAGCGGGTAGTGGAC
AACATACCAAGATGGTGAATCAGATTTTGATTGCAAATACTATGATTGgt
acgtcgggggggggggagaggaagggaggggggaattgcgtagatttggg
aatcttacttctttttcactttttccttccatctatccttcccactcatt
tatgcgtagGCGTCTGCGAAGGTCTTTTATACGCGCAGAGAGTGGGGCTG
GACCTGACTGATATCATCGCGGCCGTGGGTGCTGGAGCGGCAGGTAGCTT
CAGCATCAATAACCTGGGCCCGCGGATGgtacgtcgcgtcgccgttgctc
tcgccggtgaattcccctcattcctccgagcaacctgaagtcgaatagag
cgcgtgtgcgtgatttcctcttcctgaacgttgttctttacttgtccttt
gtcacacacttcctcgtccgctctcctcctctcctcctcctctctctctc
ctctctctcctcatctctgctcctcctctttgctcctcgtcctcactcct
ttcctaactcctttcccttctgaccccttcactcatcccttctcccccct
cctctctcctctccctcctcccacctctcctcctcgctcttcctccagGT
ACGTCGTGATTTCGCCCCAGGTTTCTACGTCGACCATTTTCTCAAGGACT
TAGGCATCGCCCTCGAGGAGGCGCGGAGGATGAACCTCGCCTTACCGGGG
CTGGCCCTCGCCAATCAAATGTACGTAGCGTTGAAGGCGCAGGGAGGAGG
GAGACTTGGCACGCAGGGACTGCTGCTCGTCCTGGAACGACTGAACGGTC
TGCAGCAGAAGGAGGAGAATGAGGGGTAGAAGAAAGGAGAGGGTGCAGGG
GAGAGGAAATGGAA
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protein sequence of NO12G00740.1

>NO12G00740.1-protein ID=NO12G00740.1-protein|Name=NO12G00740.1|organism=Nannochloropsis oceanica|type=polypeptide|length=315bp
MLPTPSAPAAPIAPGTTRIGWVGVGIMGCSMVSHLLGAGYHCTIYNRSPS
KCIPSKAKGAVIATSPKAVAEQADVVFVIVGFPTDVREVVLGHDGVFAGL
KRGGVLIDCTTSTPSLAQEIYTQGQQKGVATIDAPVSGGDIGAKTAELSF
MLGGDKEAVERSRPLLDLMGKNARYMGGAGSGQHTKMVNQILIANTMIGV
CEGLLYAQRVGLDLTDIIAAVGAGAAGSFSINNLGPRMVRRDFAPGFYVD
HFLKDLGIALEEARRMNLALPGLALANQMYVALKAQGGGRLGTQGLLLVL
ERLNGLQQKEENEG*
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Synonyms
Publications