NO12G00710, NO12G00710 (gene) Nannochloropsis oceanica

Overview
NameNO12G00710
Unique NameNO12G00710
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1739
Alignment locationchr12:248792..250530 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr12genomechr12:248792..250530 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO12G00710 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL124nonsL124Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR070ncniR070Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR006ngnoR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO12G00710.1NO12G00710.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|674643gene_9983Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO12G00710.1NO12G00710.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO12G00710 ID=NO12G00710|Name=NO12G00710|organism=Nannochloropsis oceanica|type=gene|length=1739bp
ATGACGGTGGGCATGTTGCAGCAGCAGCAGCACGACAAACATCTCTCTCA
GCAGCAGCAGCAGCAGCAGCAGCAGCAGCATCATCTTCTCCCTCCCTCCT
ATTCGTCCTCGTACGTGCAGCAGTACTACCACCCCCAGCAGTATCACCAG
CAGCAGCAGCAGCCGCAGCAGCAGCTCCACCACTCAAACGGAGGGATGAA
TCGTGGTCACAGCAGCAGTAGCAGCATGGCCTCAAATCACTCCTCCTCCT
CCTCCTCCTCTCCCTATCACCAGCCCTCCTCCTCCGCCTTTTATCCACCG
GCCAAACACCATTACTACCACCCCCACCCCCACCCACAGCACCCACAGCA
CCACCTTCAGTACCAGCAGCATCTACAACAACCGCAGCAGCAGCAGCAGC
AACACAACTACCCGTCCTCCTCCTACTCTTCTCCCCCCTACTCCTCCTCC
CTTTCCTCCTTCTCCTCCTCCTTCCAGGCCTACCAGCAGCCATCCAATGC
AATACCTGTCCTCGTCCCCCCTCTCGCTGCCGCAGGCAGAGATGGAGGCG
AAGGCCATGCATACCAGCTCCAGCAGCGCCAGCAGCTGCATCCACAGCAC
TTCTCACACGCAGGAGCAGGAGCGGCAGCAGCAGCAGCGGACCCCCCCCT
GTGCCATATTCCTCTTCTTATCGCGCCTCGTCCTCGTATATGACGTCACT
AAGTACGAAAGGAGGAGGAGAGGAAGGAGAGGGAGGGAGAGAGAGAGGGA
GGATACCGACCTCACGGAAATCGAGTCGCTGAGTGGGTGTAGGAAGGACA
GTGAGGAGGAAAGGGAGGGTTGAACGAAAAGAGGCCCTGTCAAAGAAAAG
CAATTGATGTGAGGGGTACAAGGAGAGAAAGAAGTGATAGCATGATAGGG
AGACACAGAGAGGGAGATTGGCAGGATGAGGGGGAGAGAGAAGAAGGGGA
TGAGGGAAGGAGGGAGTAAGAGGGAGGGAAAAGACTGCCGTGGGGAGGGG
GGGGATTGCGGGGGCGCGATGAAAGGATAACTGGTCTGAATCCTTCCTCC
CCTCCTCCCCTGGACCCTGATTACTAGGAATGGAGGGCTCACGCGGGGTA
AAGGATCGGTGGGGGCGCGGGAAGGAAGAAGAGAAAAATATCATTGGAAA
GATGAGGAGCACAAGCAAAGGAGAGCGAGGATATATCATGTGACCCTTAC
ACTTACTGTATAATCCTGTCAAGAAAAGAAGGAAAGGAACCGTAGCAGAC
TAACTGGAGAAAGAGGGAGAAAGGGTAAAGGGGGATAGAGAATGCGAGAG
AGAGAGATGTGTTGACCGAATAGATCATTCTGTGTTGTGTACTCTGGTGT
GGAAAAGAAAGCTGCGACATAAGAAGAGAAAGAGGTGGTAGGTACATGTG
ATGTATGCGACCTTCACAATTCTGGTATTACCGTCTGTCATGTGTGTGTG
CTGCGCGCATGTGTGTATGCTTGTGAGAGGTGTAGAGGGAATGTGGAAGA
AAATAGAGACATGTATCTTATCTTATGGTGGGCGGCGACATATGTATAAA
TATACACATGTGTGTGTGTGCATGTGCATCTACGTGTAGAGAAGCGTGGG
TATGTAGGAGTAGTTCAGAGTATGAATGGTTGGATGATTAGTTTTTCCTA
CATCGCATCAAAGACAGTGCCGACAGGATAGAAACAATTAGAATGAACGA
CGCAAAGAGAAAGAAGTAACACACGCATTTGTTTCAATG
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protein sequence of NO12G00710.1

>NO12G00710.1-protein ID=NO12G00710.1-protein|Name=NO12G00710.1|organism=Nannochloropsis oceanica|type=polypeptide|length=231bp
MTVGMLQQQQHDKHLSQQQQQQQQQQHHLLPPSYSSSYVQQYYHPQQYHQ
QQQQPQQQLHHSNGGMNRGHSSSSSMASNHSSSSSSSPYHQPSSSAFYPP
AKHHYYHPHPHPQHPQHHLQYQQHLQQPQQQQQQHNYPSSSYSSPPYSSS
LSSFSSSFQAYQQPSNAIPVLVPPLAAAGRDGGEGHAYQLQQRQQLHPQH
FSHAGAGAAAAAADPPLCHIPLLIAPRPRI*
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Synonyms
Publications