NO12G00700, NO12G00700 (gene) Nannochloropsis oceanica

Overview
NameNO12G00700
Unique NameNO12G00700
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1743
Alignment locationchr12:246277..248019 +

Link to JBrowse

Properties
Property NameValue
DescriptionUbiquitin-activating enzyme E1
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr12genomechr12:246277..248019 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008641ubiquitin-like modifier activating enzyme activity
GO:0003824catalytic activity
GO:0000166nucleotide binding
Vocabulary: INTERPRO
TermDefinition
IPR035985Ubiquitin-activating_enz
IPR000594ThiF_NAD_FAD-bd
IPR019572Ubiquitin-activating_enzyme
IPR018965Ub-activating_enz_e1_C
Homology
[Close]
BLAST of NO12G00700 vs. NCBI_GenBank
Match: EJK64444.1 (hypothetical protein THAOC_14823 [Thalassiosira oceanica])

HSP 1 Score: 296.2 bits (757), Expect = 1.000e-76
Identity = 146/275 (53.09%), Postives = 201/275 (73.09%), Query Frame = 0 
Query:    1 MVPDFSPQEGVKIAVTDAEAKQQAEXXXXXXVSSSLDLESRCESIIASLPPPASLVGFALQPVDFDKDVDAHMLVVTATSNLRAANYKIPEADMHKTRQIAGKIIPAIATTTALVTGLVCLELYKLV----LKKPIEAHKSAFINLALPLFTFSEPQPPASQKAVVKGEEWKWSAWDRIDIE-GDLTLREFLTYMEEQFGLEVSMLSHGVSLLYSSLTSKKNIELRMPMRLSEVVATVTKKPLSEGKKFLILEVICMDAETMDDVEVPYVRLRIK 271
            +VPDF+P +GVKIA  +AEAK++A+      +      ES  ++++A LP P  L GF L P++FDKD+D HML VTA SNLRA NY IP  D H++R IAG+IIPAIATTTALVTGL+CLELYK++     +  I+A+K+ F+NLA+P  T SEP  PA  KAVVKG+EW W+AWD +D+  GD+TL+EF+T+ E ++GL+VSM+SHGVS+L+S   +KK +  RM M++SEVV +VTKK L   + FL+ E+I  D +T ++VE+PYV+ R +
Sbjct:  830 IVPDFTPADGVKIAANEAEAKEEAKKDEPGDME-----ESDADAVLAGLPKPGELAGFKLNPIEFDKDLDDHMLFVTACSNLRALNYSIPTEDTHRSRAIAGRIIPAIATTTALVTGLICLELYKIIGTPQKELKIDAYKNGFVNLAIPFMTLSEPTAPAKTKAVVKGKEWNWTAWDSLDVNLGDITLKEFITHFENEYGLDVSMISHGVSILFSFFANKKKLAERMTMKMSEVVESVTKKALPGNQLFLVFEIIANDLDTDEEVELPYVKFRFR 1099
[Close]
BLAST of NO12G00700 vs. NCBI_GenBank
Match: OWZ23711.1 (hypothetical protein PHMEG_0001347 [Phytophthora megakarya])

HSP 1 Score: 295.4 bits (755), Expect = 1.800e-76
Identity = 148/270 (54.81%), Postives = 203/270 (75.19%), Query Frame = 0 
Query:    2 VPDFSPQEGVKIAVTDAEAKQQAEXXXXXXVSSSLDLESRCESIIASLPPPASLVGFALQPVDFDKDVDAHMLVVTATSNLRAANYKIPEADMHKTRQIAGKIIPAIATTTALVTGLVCLELYKLVLKKPIEAHKSAFINLALPLFTFSEPQPPASQKAVVKGEEWKWSAWDRIDIE-GDLTLREFLTYMEEQFGLEVSMLSHGVSLLYSSLTSKKNIELRMPMRLSEVVATVTKKPLSEGKKFLILEVICMDAETMDDVEVPYVRLRIK 271
            VP+FSP++GVKIA +DAE K+              D +++CE I+  LP PASL G+ +QP++FDKD D+HM V+ + SNLRA +YKIPE DMHK+R IAGKIIPAIATTTALVTGLVCLE  K+   KP++ +K+ F+NLALPLFTF+EP  P   K ++KGEE+KW+AWDR++++ GD+TL+EFLTY E+++  E+SMLS+GV++LY+  + K   + RM M++S++V TVTKKP+    K+LILEV  MDA+  +DVE+PY+R   K
Sbjct:  840 VPEFSPRKGVKIAASDAELKE-----GGGAAPGLEDSDAQCEFILKELPKPASLAGYRMQPIEFDKDDDSHMEVIVSVSNLRARSYKIPEEDMHKSRFIAGKIIPAIATTTALVTGLVCLEFLKVFQDKPLDHYKNGFVNLALPLFTFAEPIEPKMTKTMLKGEEYKWTAWDRLEVDRGDITLKEFLTYFEKEYDAEISMLSYGVTILYAMYSQKSRSKERMAMKISDLVRTVTKKPIDPKLKYLILEVCAMDADG-EDVELPYLRYHYK 1103
[Close]
BLAST of NO12G00700 vs. NCBI_GenBank
Match: XP_002999309.1 (ubiquitin activating enzyme, E1 family, putative [Phytophthora infestans T30-4] >EEY69455.1 ubiquitin activating enzyme, E1 family, putative [Phytophthora infestans T30-4])

HSP 1 Score: 293.5 bits (750), Expect = 6.700e-76
Identity = 145/270 (53.70%), Postives = 204/270 (75.56%), Query Frame = 0 
Query:    2 VPDFSPQEGVKIAVTDAEAKQQAEXXXXXXVSSSLDLESRCESIIASLPPPASLVGFALQPVDFDKDVDAHMLVVTATSNLRAANYKIPEADMHKTRQIAGKIIPAIATTTALVTGLVCLELYKLVLKKPIEAHKSAFINLALPLFTFSEPQPPASQKAVVKGEEWKWSAWDRIDIE-GDLTLREFLTYMEEQFGLEVSMLSHGVSLLYSSLTSKKNIELRMPMRLSEVVATVTKKPLSEGKKFLILEVICMDAETMDDVEVPYVRLRIK 271
            VP+FSP++GVKIA +DAE K++             D +++C+ I+  LP PA+L G+ ++P++FDKD D+HM V+ + SNLRA +YKIPE DMHK+R IAGKIIPAIATTTALVTGLVC E+ K+   KP++ +K+ F+NLALPLFTF+EP  P   K ++KGEE+KW+AWDR++++ GD+TL+EFL Y E+++  EVSMLS+GV++LY+  ++K   + RM M++S++V TVTKKP+    K+LILEV  MDAE  +DVE+PY+R   K
Sbjct:  799 VPEFSPKKGVKIAASDAELKERGAAPPLD------DADAQCDFILKELPKPATLAGYRMEPIEFDKDDDSHMEVIVSVSNLRARSYKIPEEDMHKSRFIAGKIIPAIATTTALVTGLVCFEILKVFQDKPLDHYKNGFVNLALPLFTFAEPIEPKFTKTMLKGEEYKWTAWDRLEVDRGDMTLKEFLAYFEKEYDAEVSMLSYGVTILYAMYSAKSRSKERMAMKISDLVRTVTKKPIDPNLKYLILEVCAMDAEG-EDVELPYLRYHYK 1061
[Close]
BLAST of NO12G00700 vs. NCBI_GenBank
Match: XP_009518858.1 (putative ubiquitin-activating enzyme [Phytophthora sojae] >EGZ23570.1 putative ubiquitin-activating enzyme [Phytophthora sojae])

HSP 1 Score: 292.0 bits (746), Expect = 1.900e-75
Identity = 145/270 (53.70%), Postives = 202/270 (74.81%), Query Frame = 0 
Query:    2 VPDFSPQEGVKIAVTDAEAKQQAEXXXXXXVSSSLDLESRCESIIASLPPPASLVGFALQPVDFDKDVDAHMLVVTATSNLRAANYKIPEADMHKTRQIAGKIIPAIATTTALVTGLVCLELYKLVLKKPIEAHKSAFINLALPLFTFSEPQPPASQKAVVKGEEWKWSAWDRIDIE-GDLTLREFLTYMEEQFGLEVSMLSHGVSLLYSSLTSKKNIELRMPMRLSEVVATVTKKPLSEGKKFLILEVICMDAETMDDVEVPYVRLRIK 271
            VP+FSP++GVKIA +DAE K+              D +++CESI+  LP P+ L G+ ++P++FDKD D+HM V+ + SNLRA +YKIPE DMHK+R IAGKIIPAIATTTALVTGLVC E  K+   KP++ +K+ F+NLALPLFTF+EP  P + K ++KGEE+KW+AWDR++++ GD+TL+EFL Y E+++  EVSMLS+GV++LY+  + K   + RM M++S++V TVTKKP+    K+LILEV  MDA+  +DVE+PY+R   K
Sbjct:  799 VPEFSPKKGVKIAASDAELKEGGAAPGLE------DADTQCESILNELPKPSDLAGYRMEPIEFDKDDDSHMEVIVSVSNLRARSYKIPEEDMHKSRFIAGKIIPAIATTTALVTGLVCFEFLKVFQDKPLDHYKNGFVNLALPLFTFAEPIEPKATKTMLKGEEYKWTAWDRLEVDRGDMTLKEFLAYFEKEYDAEVSMLSYGVTILYAMYSQKSRSKERMAMKISDLVRTVTKKPIDPKLKYLILEVCAMDADG-EDVELPYLRYHYK 1061
[Close]
BLAST of NO12G00700 vs. NCBI_GenBank
Match: POM78699.1 (Ubiquitin activating enzyme, E1 family, partial [Phytophthora palmivora var. palmivora])

HSP 1 Score: 292.0 bits (746), Expect = 1.900e-75
Identity = 146/270 (54.07%), Postives = 202/270 (74.81%), Query Frame = 0 
Query:    2 VPDFSPQEGVKIAVTDAEAKQQAEXXXXXXVSSSLDLESRCESIIASLPPPASLVGFALQPVDFDKDVDAHMLVVTATSNLRAANYKIPEADMHKTRQIAGKIIPAIATTTALVTGLVCLELYKLVLKKPIEAHKSAFINLALPLFTFSEPQPPASQKAVVKGEEWKWSAWDRIDIE-GDLTLREFLTYMEEQFGLEVSMLSHGVSLLYSSLTSKKNIELRMPMRLSEVVATVTKKPLSEGKKFLILEVICMDAETMDDVEVPYVRLRIK 271
            VP+FSP++GVKIA +DAE K+ A            D +++C  I+  LP PA+L G+ +QP++FDKD D+HM V+ + SNLRA +YKIPE DMHK+R IAGKIIPAIATTTALVTGLVC E  K+   KP++ +K+ F+NLALPLFTF+EP  P + K ++KGEE+KW+AWDR++++ GD+TL+EFL Y E+++  EVSMLS+GV++LY+  + K   + RM M++S++V TVTKKP+    K+LILEV  MDA+  +DVE+PY+R   K
Sbjct:  581 VPEFSPKKGVKIAASDAELKEGAAAAPGLE-----DADAQCAFILKELPKPATLAGYRMQPIEFDKDDDSHMEVIVSVSNLRARSYKIPEEDMHKSRFIAGKIIPAIATTTALVTGLVCFEFLKVFQDKPLDHYKNGFVNLALPLFTFAEPIEPKATKTMLKGEEYKWTAWDRLEVDRGDMTLKEFLAYFEKEYDAEVSMLSYGVTILYAMYSQKSRSKERMAMKISDLVRTVTKKPIDPKLKYLILEVCAMDADG-EDVELPYLRYHYK 844
[Close]
BLAST of NO12G00700 vs. NCBI_GenBank
Match: ETI49461.1 (hypothetical protein F443_06763 [Phytophthora parasitica P1569] >ETL42664.1 hypothetical protein L916_06575 [Phytophthora parasitica] >ETL95829.1 hypothetical protein L917_06446 [Phytophthora parasitica] >ETO78196.1 hypothetical protein F444_06830 [Phytophthora parasitica P1976])

HSP 1 Score: 290.8 bits (743), Expect = 4.300e-75
Identity = 146/270 (54.07%), Postives = 202/270 (74.81%), Query Frame = 0 
Query:    2 VPDFSPQEGVKIAVTDAEAKQQAEXXXXXXVSSSLDLESRCESIIASLPPPASLVGFALQPVDFDKDVDAHMLVVTATSNLRAANYKIPEADMHKTRQIAGKIIPAIATTTALVTGLVCLELYKLVLKKPIEAHKSAFINLALPLFTFSEPQPPASQKAVVKGEEWKWSAWDRIDIE-GDLTLREFLTYMEEQFGLEVSMLSHGVSLLYSSLTSKKNIELRMPMRLSEVVATVTKKPLSEGKKFLILEVICMDAETMDDVEVPYVRLRIK 271
            VP+FSP++GVKIA +DAE K+              D +++C+ I+  LP PA+L G+ +QP++FDKD D+HM V+ + SNLRA +YKIPE DMHK+R IAGKIIPAIATTTALVTGLVC E  K+   KP++ +K+ F+NLALPLFTF+EP  P   K ++KGEE+KW+AWDR++++ GD+TL+EFL Y E+++  EVSMLS+GV++LY+  ++K   + RM M++S++V TVTKKP+    K+LILEV  MDAE  +DVE+PY+R   K
Sbjct:  811 VPEFSPKKGVKIAASDAELKEGGAAPPLQ------DGDAQCDLILKELPKPATLAGYRMQPIEFDKDDDSHMEVIVSVSNLRARSYKIPEEDMHKSRFIAGKIIPAIATTTALVTGLVCFEFLKVFQDKPLDHYKNGFVNLALPLFTFAEPIAPKFTKTMLKGEEYKWTAWDRLEVDRGDMTLKEFLAYFEKEYDAEVSMLSYGVTILYAMYSAKSRSKERMAMKISDLVRTVTKKPIDPKLKYLILEVCAMDAEG-EDVELPYLRYHYK 1073
[Close]
BLAST of NO12G00700 vs. NCBI_GenBank
Match: ETI49462.1 (hypothetical protein, variant 1 [Phytophthora parasitica P1569] >ETL42665.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETL95830.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETO78197.1 hypothetical protein, variant 1 [Phytophthora parasitica P1976])

HSP 1 Score: 290.8 bits (743), Expect = 4.300e-75
Identity = 146/270 (54.07%), Postives = 202/270 (74.81%), Query Frame = 0 
Query:    2 VPDFSPQEGVKIAVTDAEAKQQAEXXXXXXVSSSLDLESRCESIIASLPPPASLVGFALQPVDFDKDVDAHMLVVTATSNLRAANYKIPEADMHKTRQIAGKIIPAIATTTALVTGLVCLELYKLVLKKPIEAHKSAFINLALPLFTFSEPQPPASQKAVVKGEEWKWSAWDRIDIE-GDLTLREFLTYMEEQFGLEVSMLSHGVSLLYSSLTSKKNIELRMPMRLSEVVATVTKKPLSEGKKFLILEVICMDAETMDDVEVPYVRLRIK 271
            VP+FSP++GVKIA +DAE K+              D +++C+ I+  LP PA+L G+ +QP++FDKD D+HM V+ + SNLRA +YKIPE DMHK+R IAGKIIPAIATTTALVTGLVC E  K+   KP++ +K+ F+NLALPLFTF+EP  P   K ++KGEE+KW+AWDR++++ GD+TL+EFL Y E+++  EVSMLS+GV++LY+  ++K   + RM M++S++V TVTKKP+    K+LILEV  MDAE  +DVE+PY+R   K
Sbjct:  799 VPEFSPKKGVKIAASDAELKEGGAAPPLQ------DGDAQCDLILKELPKPATLAGYRMQPIEFDKDDDSHMEVIVSVSNLRARSYKIPEEDMHKSRFIAGKIIPAIATTTALVTGLVCFEFLKVFQDKPLDHYKNGFVNLALPLFTFAEPIAPKFTKTMLKGEEYKWTAWDRLEVDRGDMTLKEFLAYFEKEYDAEVSMLSYGVTILYAMYSAKSRSKERMAMKISDLVRTVTKKPIDPKLKYLILEVCAMDAEG-EDVELPYLRYHYK 1061
[Close]
BLAST of NO12G00700 vs. NCBI_GenBank
Match: XP_008892413.1 (hypothetical protein, variant 2 [Phytophthora parasitica INRA-310] >ETI49463.1 hypothetical protein, variant 2 [Phytophthora parasitica P1569] >ETL42666.1 hypothetical protein, variant 2 [Phytophthora parasitica] >ETL95831.1 hypothetical protein, variant 2 [Phytophthora parasitica] >ETN23218.1 hypothetical protein, variant 2 [Phytophthora parasitica INRA-310] >ETO78198.1 hypothetical protein, variant 2 [Phytophthora parasitica P1976])

HSP 1 Score: 290.8 bits (743), Expect = 4.300e-75
Identity = 146/270 (54.07%), Postives = 202/270 (74.81%), Query Frame = 0 
Query:    2 VPDFSPQEGVKIAVTDAEAKQQAEXXXXXXVSSSLDLESRCESIIASLPPPASLVGFALQPVDFDKDVDAHMLVVTATSNLRAANYKIPEADMHKTRQIAGKIIPAIATTTALVTGLVCLELYKLVLKKPIEAHKSAFINLALPLFTFSEPQPPASQKAVVKGEEWKWSAWDRIDIE-GDLTLREFLTYMEEQFGLEVSMLSHGVSLLYSSLTSKKNIELRMPMRLSEVVATVTKKPLSEGKKFLILEVICMDAETMDDVEVPYVRLRIK 271
            VP+FSP++GVKIA +DAE K+              D +++C+ I+  LP PA+L G+ +QP++FDKD D+HM V+ + SNLRA +YKIPE DMHK+R IAGKIIPAIATTTALVTGLVC E  K+   KP++ +K+ F+NLALPLFTF+EP  P   K ++KGEE+KW+AWDR++++ GD+TL+EFL Y E+++  EVSMLS+GV++LY+  ++K   + RM M++S++V TVTKKP+    K+LILEV  MDAE  +DVE+PY+R   K
Sbjct:  771 VPEFSPKKGVKIAASDAELKEGGAAPPLQ------DGDAQCDLILKELPKPATLAGYRMQPIEFDKDDDSHMEVIVSVSNLRARSYKIPEEDMHKSRFIAGKIIPAIATTTALVTGLVCFEFLKVFQDKPLDHYKNGFVNLALPLFTFAEPIAPKFTKTMLKGEEYKWTAWDRLEVDRGDMTLKEFLAYFEKEYDAEVSMLSYGVTILYAMYSAKSRSKERMAMKISDLVRTVTKKPIDPKLKYLILEVCAMDAEG-EDVELPYLRYHYK 1033
[Close]
BLAST of NO12G00700 vs. NCBI_GenBank
Match: ETK89339.1 (hypothetical protein L915_06636 [Phytophthora parasitica] >ETP19234.1 hypothetical protein F441_06766 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 290.8 bits (743), Expect = 4.300e-75
Identity = 146/270 (54.07%), Postives = 202/270 (74.81%), Query Frame = 0 
Query:    2 VPDFSPQEGVKIAVTDAEAKQQAEXXXXXXVSSSLDLESRCESIIASLPPPASLVGFALQPVDFDKDVDAHMLVVTATSNLRAANYKIPEADMHKTRQIAGKIIPAIATTTALVTGLVCLELYKLVLKKPIEAHKSAFINLALPLFTFSEPQPPASQKAVVKGEEWKWSAWDRIDIE-GDLTLREFLTYMEEQFGLEVSMLSHGVSLLYSSLTSKKNIELRMPMRLSEVVATVTKKPLSEGKKFLILEVICMDAETMDDVEVPYVRLRIK 271
            VP+FSP++GVKIA +DAE K+              D +++C+ I+  LP PA+L G+ +QP++FDKD D+HM V+ + SNLRA +YKIPE DMHK+R IAGKIIPAIATTTALVTGLVC E  K+   KP++ +K+ F+NLALPLFTF+EP  P   K ++KGEE+KW+AWDR++++ GD+TL+EFL Y E+++  EVSMLS+GV++LY+  ++K   + RM M++S++V TVTKKP+    K+LILEV  MDAE  +DVE+PY+R   K
Sbjct:  811 VPEFSPKKGVKIAASDAELKEGGAAPPLQ------DGDAQCDLILKELPKPATLAGYRMQPIEFDKDDDSHMEVIVSVSNLRARSYKIPEEDMHKSRFIAGKIIPAIATTTALVTGLVCFEFLKVFQDKPLDHYKNGFVNLALPLFTFAEPIAPKFTKTMLKGEEYKWTAWDRLEVDRGDMTLKEFLAYFEKEYDAEVSMLSYGVTILYAMYSAKSRSKERMAMKISDLVRTVTKKPIDPKLKYLILEVCAMDAEG-EDVELPYLRYHYK 1073
[Close]
BLAST of NO12G00700 vs. NCBI_GenBank
Match: ETK89340.1 (hypothetical protein, variant 1 [Phytophthora parasitica] >ETP19235.1 hypothetical protein, variant 1 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 290.8 bits (743), Expect = 4.300e-75
Identity = 146/270 (54.07%), Postives = 202/270 (74.81%), Query Frame = 0 
Query:    2 VPDFSPQEGVKIAVTDAEAKQQAEXXXXXXVSSSLDLESRCESIIASLPPPASLVGFALQPVDFDKDVDAHMLVVTATSNLRAANYKIPEADMHKTRQIAGKIIPAIATTTALVTGLVCLELYKLVLKKPIEAHKSAFINLALPLFTFSEPQPPASQKAVVKGEEWKWSAWDRIDIE-GDLTLREFLTYMEEQFGLEVSMLSHGVSLLYSSLTSKKNIELRMPMRLSEVVATVTKKPLSEGKKFLILEVICMDAETMDDVEVPYVRLRIK 271
            VP+FSP++GVKIA +DAE K+              D +++C+ I+  LP PA+L G+ +QP++FDKD D+HM V+ + SNLRA +YKIPE DMHK+R IAGKIIPAIATTTALVTGLVC E  K+   KP++ +K+ F+NLALPLFTF+EP  P   K ++KGEE+KW+AWDR++++ GD+TL+EFL Y E+++  EVSMLS+GV++LY+  ++K   + RM M++S++V TVTKKP+    K+LILEV  MDAE  +DVE+PY+R   K
Sbjct:  799 VPEFSPKKGVKIAASDAELKEGGAAPPLQ------DGDAQCDLILKELPKPATLAGYRMQPIEFDKDDDSHMEVIVSVSNLRARSYKIPEEDMHKSRFIAGKIIPAIATTTALVTGLVCFEFLKVFQDKPLDHYKNGFVNLALPLFTFAEPIAPKFTKTMLKGEEYKWTAWDRLEVDRGDMTLKEFLAYFEKEYDAEVSMLSYGVTILYAMYSAKSRSKERMAMKISDLVRTVTKKPIDPKLKYLILEVCAMDAEG-EDVELPYLRYHYK 1061
The following BLAST results are available for this feature:
BLAST of NO12G00700 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EJK64444.11.000e-7653.09hypothetical protein THAOC_14823 [Thalassiosira oc... [more]
OWZ23711.11.800e-7654.81hypothetical protein PHMEG_0001347 [Phytophthora m... [more]
XP_002999309.16.700e-7653.70ubiquitin activating enzyme, E1 family, putative [... [more]
XP_009518858.11.900e-7553.70putative ubiquitin-activating enzyme [Phytophthora... [more]
POM78699.11.900e-7554.07Ubiquitin activating enzyme, E1 family, partial [P... [more]
ETI49461.14.300e-7554.07hypothetical protein F443_06763 [Phytophthora para... [more]
ETI49462.14.300e-7554.07hypothetical protein, variant 1 [Phytophthora para... [more]
XP_008892413.14.300e-7554.07hypothetical protein, variant 2 [Phytophthora para... [more]
ETK89339.14.300e-7554.07hypothetical protein L915_06636 [Phytophthora para... [more]
ETK89340.14.300e-7554.07hypothetical protein, variant 1 [Phytophthora para... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL124nonsL124Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR070ncniR070Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR006ngnoR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO12G00700.1NO12G00700.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|560834gene_9982Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO12G00700.1NO12G00700.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO12G00700 ID=NO12G00700|Name=NO12G00700|organism=Nannochloropsis oceanica|type=gene|length=1743bp
ATGGTGCCCGATTTTTCTCCGCAAGgtacagatcaaccctccctccctcc
ctccctcccttcctccttctctccctccccttctcaagctcttcccgcga
gacctccacaaccttccttttcccctccttcccttcctccctccctccct
ccttccctccctgtcctcctctcaatacagAGGGCGTCAAAATCGCCGTC
ACGGACGCAGAGGCCAAGCAGCAGGCCGAGCAAGGAGGAGGGGGGGGGGT
ATCCTCCTCCCTCGACTTGGAGAGCCGGTGCGAGTCCATCATTGCCTCCC
TCCCTCCCCCCGCGTCGCTGGTCGGCTTTGCCCTCCAGCCCGTGGATTTC
GACAAGGACGTGGATGCGCACATgtgagaaaaggagggagggagggaggg
agggaggaagggagggaaggagcgagggggattgggaaagcgaaagtgac
atccaattgcgttttgcacatgtcaacacgctttctcatctccctccctc
cctctttccctccctccctcccttcagGCTGGTGGTGACGGCGACGAGTA
ACCTCCGGGCTGCCAACTACAAAATTCCCGgtagggagggagagggagag
ggatagaaggagggagggagggaggggaagaaggaagaagattaaggggg
aggcattgcctcagaaggtacacttcctaaacgtccctcccttcctccct
ccctccctctcctccagAGGCGGACATGCACAAGACGCGCCAAATCGCGG
GGAAGATCATTCCCGCCATCGCCACCACCACTGCTCTCGTCACAGGCCTC
GTCTGCCTTGAGCTCTACAAGCTCGgtgagccccctccctccgttcctcc
ttccctccttccttccctccctaacgggaagttggtagctggcgtccttc
tttctttccctccttcccttcctcatttcaccacacgcttttccatctca
ttctctctgtcttccttcccgtccttcctctccccttccctccctccttc
cagTCCTCAAGAAACCTATAGAGGCACATAAGTCTGCTTTCATCAACCTC
GCCCTCCCTCTCTTCACCTTTTCGGAGCCCCAGCCACCCGCCAGCCAGAA
GGCGGTGGTGAAGGGAGAGGAATGGAAGTGGAGCGCATGGGACAGGATCG
ACATCGAAGgtagggaggggggggcacgtgcgcatgtgtacgtgtatgca
tgtgcatgtccttgggatttaaagaagccttgtgtgcgcctgtgaggggg
cggttgtggtggcagtagcggagtgggtggataggatctacatcggaagt
aggtaggaaagaagagaactattaacaaaacaaaacgcggacgtttgccc
gcccccccccccccccccccccccccccgatgaaatagtaaatcaaacgt
aagacaagaggaaaacaaaatataacgcccattttaatttaaattaaaaa
tacatcaaaaaacagGTGACCTGACCCTCCGTGAATTCTTGACTTACATG
GAAGAGCAATTCGGGCTGGAAGTGAGCATGCTTTCGCACGGGGTCTCGCT
CCTCTACTCCTCCCTCACCAGCAAGAAGAACATTGAGCTCCGGATGCCCA
TGCGCCTGAGCGAGGTGGTTGCGACCGTGACGAAAAAGCCTCTTTCGGAA
GGGAAGAAGTTTTTGATTCTGGAGGTTATTTGCATGGACGCGGAGACAAT
GGACGATGTGGAGGTGCCTTACGTCAGGCTGAGGATCAAGTAA
back to top

protein sequence of NO12G00700.1

>NO12G00700.1-protein ID=NO12G00700.1-protein|Name=NO12G00700.1|organism=Nannochloropsis oceanica|type=polypeptide|length=271bp
MVPDFSPQEGVKIAVTDAEAKQQAEQGGGGGVSSSLDLESRCESIIASLP
PPASLVGFALQPVDFDKDVDAHMLVVTATSNLRAANYKIPEADMHKTRQI
AGKIIPAIATTTALVTGLVCLELYKLVLKKPIEAHKSAFINLALPLFTFS
EPQPPASQKAVVKGEEWKWSAWDRIDIEGDLTLREFLTYMEEQFGLEVSM
LSHGVSLLYSSLTSKKNIELRMPMRLSEVVATVTKKPLSEGKKFLILEVI
CMDAETMDDVEVPYVRLRIK*
back to top
Synonyms
Publications