NO12G00670, NO12G00670 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO12G00670 vs. NCBI_GenBank
Match: EWM23633.1 (CRAL-TRIO domain protein [Nannochloropsis gaditana]) HSP 1 Score: 145.2 bits (365), Expect = 3.100e-31 Identity = 76/241 (31.54%), Postives = 127/241 (52.70%), Query Frame = 0 Query: 49 KFQSPRLYFLGLTPRTKATLGTEDYTEALREMRGIFPEAQDSDMVPFIRICKGVVKEASKMYGDCLTWRSTMLPVSRDSCLSVLQRGMFFFHGEDKEGRPLGYLTMRGHDPKTRDLDQCLRAIIYQCEALIASKEGKEFQVTIILDRNGTTKQNQDSDMMKLFFALFSERYPDKLRRVLVCPANFMFNTFWSVIKYSMPERVRNKVTMCNNEAALTQFVDPEQLIDSLGGKDA--YDPTKA 288 +F +PR + + LTP+ K T E L +M FP A++ D+ F+ +A Y L WR+ LP++++SCL LQ+G F+FHG D EGRP+ Y ++ HDPK D+ + +R + YQ E ++A TI+ D T +N D++ ++ F F +YP+ L ++L+ P F T W+ + ER +++ M L ++ ++L+ + GGK+ +DP A Sbjct: 4 EFLTPRKWDI-LTPKAKDT--QEALRIELEKMTAHFPAAKEKDLKRFLMGFHTKADKAIPAYEAHLHWRAQNLPIAKESCLKELQKGRFYFHGMDLEGRPVAYYSLACHDPKHCDISEIMRMMTYQVEKVLAEMPDDVKGFTIVWDTRNTGIKNTDTEFLREFLNFFRAQYPEVLAQLLIVPVGFFQRTMWNTFARFLDERRASRIRMVATMEDLRDYISEKELLTTHGGKNTWHFDPDNA 241
BLAST of NO12G00670 vs. NCBI_GenBank
Match: XP_004359533.1 (cellular retinaldehyde-binding/triple function domain-containing protein [Cavenderia fasciculata] >EGG21683.1 cellular retinaldehyde-binding/triple function domain-containing protein [Cavenderia fasciculata]) HSP 1 Score: 109.4 bits (272), Expect = 1.900e-20 Identity = 67/223 (30.04%), Postives = 109/223 (48.88%), Query Frame = 0 Query: 68 LGTEDYTEALREMRGIFPEAQDSDMVPFIRICKGVVKEASKMYGDCLTWRSTMLPV-----SRDSCLSVLQRGMFFFHGEDKEGRPLGYLTMRGHDPKTRDLDQCLRAIIYQCEALIASKEGKEFQVTIILDRNGTTKQNQDSDMMKLFFALFSERYPDKLRRVLVCPANFMFNTFWSVIKYSMPERVRNKVTMCNNEAALTQFVDPEQLIDSLGGKDAYDPT 286 L ++ T+A +E + DS ++ F R K VVK+A +M + L +R + V DS + L+ G FFHG DKEGRP+ + R HD RD+D+ R +Y E+ + T+I D + + +N D ++K +F + YP+ L + L+ A ++F FW +IK+ + +KV + L F+ E L+ S GG + T Sbjct: 22 LVNKNMTDATKEEA---EKLDDSMILRFCRARKWVVKDAYEMLNNALVFRGSFQNVGVENIKEDSIENELKSGKSFFHGTDKEGRPVCIVRTRKHDGTNRDIDEAQRYCVYVMESGKQMLKPGIETCTLIFDMSSFSTKNMDYPLVKFMVDMFQKYYPESLAKCLILNAPWIFMGFWHIIKHWLDPYTVSKVNFVKTK-QLADFIPTENLLQSYGGSSQFKYT 240
BLAST of NO12G00670 vs. NCBI_GenBank
Match: XP_005772066.1 (hypothetical protein EMIHUDRAFT_444869 [Emiliania huxleyi CCMP1516] >EOD19637.1 hypothetical protein EMIHUDRAFT_444869 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 108.2 bits (269), Expect = 4.300e-20 Identity = 70/245 (28.57%), Postives = 115/245 (46.94%), Query Frame = 0 Query: 45 GAMTKFQSPRLYFLGLTPRTKATLGTEDYTEALREMRGIFPEAQDS-DMVPFIRICKGVVKEASKMYGDCLTWRSTMLPVSRD-SCLSVLQRGMFFFHGEDKEGRPLGYLTMRGHDPKTRDLDQCLRAIIYQCEALIASKEGKEFQVTIILDRNG-TTKQNQDSDMMKLFFALFSERYPDKLRRVLVCPANFMFNTFWSVIKYSMPERVRNKVTMCNNEAALTQFVDPEQLIDSLGGKD--AYDP 285 G + S + + P A LGT+ P A DS + F+ K V +M + WR+ LP+ + + L+ LQ+G F+ +G D GRPL + DP TRDL+ +R++ Y+ E +IA + Q + DR G + K+N D ++K F S+ YP++L V P+ + W ++K+ + R R+KV N + L + + E + + GG A+DP Sbjct: 18 GTLATDASLEPFLAAVEPDLLAALGTD------------HPLAGDSLQLRRFLVARKFKVPATVEMISAHVKWRAENLPIKPEGAVLAELQKGKFYSYGTDAAGRPLVLIHSGKFDPATRDLEASVRSVFYEIERVIAQLPPGQAQFAVFYDRTGFSIKKNWDYTLLKAVFTQLSDNYPERLGAGYVYPSGKLLPMLWGLVKHFLDARTRSKVKFINTQEELLKSLPAEYVPTAYGGSSTHAFDP 250
BLAST of NO12G00670 vs. NCBI_GenBank
Match: XP_005758036.1 (hypothetical protein EMIHUDRAFT_438954 [Emiliania huxleyi CCMP1516] >EOD05607.1 hypothetical protein EMIHUDRAFT_438954 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 107.5 bits (267), Expect = 7.300e-20 Identity = 70/245 (28.57%), Postives = 114/245 (46.53%), Query Frame = 0 Query: 45 GAMTKFQSPRLYFLGLTPRTKATLGTEDYTEALREMRGIFPEAQDS-DMVPFIRICKGVVKEASKMYGDCLTWRSTMLPVSRD-SCLSVLQRGMFFFHGEDKEGRPLGYLTMRGHDPKTRDLDQCLRAIIYQCEALIASKEGKEFQVTIILDRNG-TTKQNQDSDMMKLFFALFSERYPDKLRRVLVCPANFMFNTFWSVIKYSMPERVRNKVTMCNNEAALTQFVDPEQLIDSLGGKD--AYDP 285 G + S + + P A LGT+ P A DS + F+ K V +M + WR+ LP+ + + L+ LQ+G F+ +G D GRPL + DP TRDL+ +R++ Y+ E +IA + Q + DR G + K+N D ++K F S YP++L V P+ + W ++K+ + R R+KV N + L + + E + + GG A+DP Sbjct: 18 GTLATDASLEPFLAAVEPDLLAALGTD------------HPLAGDSLQLRRFLVARKFKVPATVEMISAHVKWRAENLPIKPEGAVLAELQKGKFYSYGTDAAGRPLVLIHSGKFDPATRDLEASVRSVFYEIERVIAQLPPGQAQFAVFYDRTGFSIKKNWDYTLLKAVFTQLSNNYPERLGAGYVYPSGKLLPMLWGLVKHFLDARTRSKVKFINTQEELLKSLPAEYVPTAYGGSSTHAFDP 250
BLAST of NO12G00670 vs. NCBI_GenBank
Match: XP_012756286.1 (hypothetical protein SAMD00019534_043270, partial [Acytostelium subglobosum LB1] >GAM21152.1 hypothetical protein SAMD00019534_043270, partial [Acytostelium subglobosum LB1]) HSP 1 Score: 107.1 bits (266), Expect = 9.500e-20 Identity = 62/208 (29.81%), Postives = 105/208 (50.48%), Query Frame = 0 Query: 89 DSDMVPFIRICKGVVKEASKMYGDCLTWRSTMLP-----VSRDSCLSVLQRGMFFFHGEDKEGRPLGYLTMRGHDPKTRDLDQCLRAIIYQCEALIASKEGKEF------QVTIILDRNGTTKQNQDSDMMKLFFALFSERYPDKLRRVLVCPANFMFNTFWSVIKYSMPERVRNKVTMCNNEAALTQFVDPEQLIDSLGGKDAYDPT 286 DS ++ F+R K ++++ M + L++R++ ++ S + L+ G FFHG DKEGRP+ + R HD RDLD+ R I+Y E GKE T+I D + + +N D + K +F + YP+ L + + A +MF WS+IK+ + +K+ ++ L +++ PEQL+ S GG + T Sbjct: 40 DSMILRFLRARKWKLEDSYNMLQEALSFRASFQDKGVDFITESSVENELKCGKSFFHGSDKEGRPICIVRTRKHDSSQRDLDEAQRYIVYVMET------GKELLPEGIETCTLIFDMSSFSTKNMDYPLCKFMVEMFQKYYPESLSKCFILNAPWMFMGIWSIIKHWLDPYTVSKINFVKSK-QLLEYIHPEQLLTSYGGASDFKYT 240
BLAST of NO12G00670 vs. NCBI_GenBank
Match: EWM29608.1 (CRAL-TRIO domain protein [Nannochloropsis gaditana]) HSP 1 Score: 104.8 bits (260), Expect = 4.700e-19 Identity = 60/215 (27.91%), Postives = 103/215 (47.91%), Query Frame = 0 Query: 71 EDYTEALREMRGIFPEAQDSDMVPFIRICKGVVKEASKMYGDCLTWRSTMLPVSRDSCLSVLQRGMFFFHGEDKEGRPLGYLTMRGHDPKTRDLDQCLRAIIYQCEALIAS--KEGKEFQVTIILDRNGTTKQNQDSDMMKLFFALFSERYPDKLRRVLVCPANFMFNTFW-SVIKYSMPERVRNKVTMCNNEAALTQFVDPEQLIDSLGGKDAY 283 ED +RE +A D +++ + G VK+A WR LP+ R L L+ G F F G DK GR + Y ++ H+P+ Q ++A++Y E + A G E ++ +++DR N D + MKL + + E YP + LV NF+F W +++ + + R+ + ++ L F++ +L++ LGGK Y Sbjct: 63 EDMIHYVRESGVSVEDADDDEVIRLLAEWNGNVKDAVLNGEKGRAWRKENLPIPRAEVLPTLKTGKFVFAGYDKVGRAICYYRVKFHNPRQFAPLQSVKAVVYLYEEMRAEGRLRGAE-EICVVVDRTDAKSANMDIEFMKLLYTMLKESYPARGELFLVLGVNFIFRKIWENLVSVFLDAKSRSATHLLKDKKELLDFIEEGELVEWLGGKLPY 276
BLAST of NO12G00670 vs. NCBI_GenBank
Match: XP_013760254.1 (hypothetical protein AMSG_11756 [Thecamonas trahens ATCC 50062] >KNC46762.1 hypothetical protein AMSG_11756 [Thecamonas trahens ATCC 50062]) HSP 1 Score: 102.1 bits (253), Expect = 3.100e-18 Identity = 53/184 (28.80%), Postives = 97/184 (52.72%), Query Frame = 0 Query: 112 DCLTWRS---TMLPVSRDSCLSVLQRGMFFFHGEDKEGRPLGYLTMRGHDPKTRDLDQCLRAIIYQ-CEALIASKEGKEFQVTIILDRNGTTKQNQDSDMMKLFFALFSERYPDKLRRVLVCPANFMFNTFWSVIKYSMPERVRNKVTMCNNEA---ALTQFVDPEQLIDSLGGKDAYDPTKAD 289 D + WR ++ V D + L+ F HG D GRP+ +R HD TRDLD + ++ Q + +++ + Q +++LDR T + N D+ M++ A+ S+ YP++L V N++F+ + + K +P+R +KV + + + L Q++ P+QL + GG +Y+ T A+ Sbjct: 73 DDIHWREEHPELVDVDDDEIVEELESNKAFLHGFDSLGRPIMVFILRRHDKNTRDLDHSTKYVMRQIARGIRTAEQHGQLQFSVVLDRYDTGRANSDTTMVRSLMAILSDHYPERLGTAYVLYPNWLFSIAYRIAKAFLPKRTMDKVLLFSGDTMFDELHQYIAPDQLQPAYGGTSSYEYTFAN 256
BLAST of NO12G00670 vs. NCBI_GenBank
Match: KXN69343.1 (CRAL/TRIO domain-containing protein, partial [Conidiobolus coronatus NRRL 28638]) HSP 1 Score: 101.7 bits (252), Expect = 4.000e-18 Identity = 60/213 (28.17%), Postives = 108/213 (50.70%), Query Frame = 0 Query: 80 MRGIFPEAQDSDMVPFIRICKGVVKEASKMYGDCLT------WRSTMLPVSRDSCLSVLQRGMFFFHGEDKEGRPLGYLTMRGHDPKTRDLDQCLRAIIY---QCEALIASKEGKEFQVTIILDRNGTTKQNQDSDMMKLFFALFSERYPDKLRRVLVCPANFMFNTFWSVIKYSMPERVRNKVTMCNNEAALTQFVDPEQLIDSLGGKDAYD 284 M I + D+ + +++ K A KM DC+T +R + R+ L+ G+F+FHG D EG + Y+ R H+PK +D+ + ++Y Q +I K + T+++D G + N + +K + + +P+ LRRV++ A ++F+ WSVI + V++KV C+ E L +F+ P+QL LGG + ++ Sbjct: 6 MSNIMEDHPDNLFIRYLKARKYDASLAFKMLYDCVTFLYFQEFREIIRAGERELLQLPLESGLFYFHGHDLEGNIILYINPRVHNPKETPIDEFSKVLLYIIAQGYLMIGDK-----KATVVVDLKGLSLSNVEYASVKFLSDILAYYFPEVLRRVIIVNAPWIFSGIWSVITSFLDPVVKDKVQFCSQE-DLQKFIAPDQLATRLGGTNTHE 212
BLAST of NO12G00670 vs. NCBI_GenBank
Match: KYK56674.1 (CRAL/TRIO domain protein [Drechmeria coniospora] >ODA77113.1 hypothetical protein RJ55_07631 [Drechmeria coniospora]) HSP 1 Score: 99.0 bits (245), Expect = 2.600e-17 Identity = 69/268 (25.75%), Postives = 113/268 (42.16%), Query Frame = 0 Query: 43 RFGAMTKFQSPRLYFLGLTPRTKATLGTEDYTEALREMRGIFPEAQDSDMVPFIRICKGVVKEASKMYGDCLTWRSTMLPVSRD-------------------------SCLSVLQRGMFFFHGEDKEGRPLGYLTMRGHDPKTRDLDQCLRAIIYQCEALIASKEGKEFQVTIILDRNGTTKQNQDSDMMKLFFALFSERYPDKLRRVLVCPANFMFNTFWSVIKYSMPERVRNKVTMCNNEAALTQFVDPEQLIDSLGGKDAYDPT 286 R+G +FQ+ T A+ E +AL M + + D+ ++ F+R K V +A M L+WR++ + V D ++ + GM F HG DKEGRP+ + +R H P + + R ++ E + + T++ D G T N D +K F YP+ L VLV + ++F W +I+ + V KV NN A L +F+ Q+I LGG + ++ T Sbjct: 239 RYGQTKQFQN-----------TLASQTPESIRQALWSM--VKHDNPDALVLRFLRARKWDVDKAIVMLISALSWRNSQMKVDSDIMMNGEGGAALDERNGAADAKKLASDFMTQCRTGMSFLHGTDKEGRPICIIKVRLHKPGAQSAESLERYTVFVIETARMALKAPVDTATVVFDMTGFTLANMDYHPVKFMIQCFEANYPESLGAVLVHNSPWVFQGIWRIIRGWLDPVVAAKVHFTNNRAGLEKFIAANQIIKDLGGDEDWEFT 493
BLAST of NO12G00670 vs. NCBI_GenBank
Match: XP_012759531.1 (hypothetical protein SAMD00019534_006440 [Acytostelium subglobosum LB1] >GAM17469.1 hypothetical protein SAMD00019534_006440 [Acytostelium subglobosum LB1]) HSP 1 Score: 98.2 bits (243), Expect = 4.400e-17 Identity = 58/202 (28.71%), Postives = 100/202 (49.50%), Query Frame = 0 Query: 89 DSDMVPFIRICKGVVKEASKMYGDCLTWRST-----MLPVSRDSCLSVLQRGMFFFHGEDKEGRPLGYLTMRGHDPKTRDLDQCLRAIIYQCEALIASKEGKEFQVTIILDRNGTTKQNQDSDMMKLFFALFSERYPDKLRRVLVCPANFMFNTFWSVIKYSMPERVRNKVTMCNNEAALTQFVDPEQLIDSLGGKDAYDPT 286 DS ++ F+R K V+ +A KM D L +R+T + ++ +S + L+ G FF+G D GRP+ + R HD RD+ + R +Y E A T+I D + +N D +++K +F + YP+ L + L+ A ++F W++IK+ M KV ++ L +++ E L+ S GG + T Sbjct: 40 DSMILRFLRARKWVLNDAYKMLLDALVFRATFQEIGVEKITEESVENELKTGKSFFYGWDNGGRPVCIIRTRKHDSSQRDIQEAHRYCVYFMEKGKALLPPGIETCTLIFDMTSFSTKNMDYELVKFIVDMFQKYYPESLNKCLIVNAPWIFTGIWNIIKHWMDPITVGKVNFVKSK-QLIEYIPAEHLLASYGGASTWKYT 240 The following BLAST results are available for this feature:
BLAST of NO12G00670 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO12G00670 ID=NO12G00670|Name=NO12G00670|organism=Nannochloropsis oceanica|type=gene|length=2243bpback to top protein sequence of NO12G00670.1 >NO12G00670.1-protein ID=NO12G00670.1-protein|Name=NO12G00670.1|organism=Nannochloropsis oceanica|type=polypeptide|length=290bpback to top Synonyms
Publications
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