NO12G00620, NO12G00620 (gene) Nannochloropsis oceanica

Overview
NameNO12G00620
Unique NameNO12G00620
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1382
Alignment locationchr12:224544..225925 +

Link to JBrowse

Properties
Property NameValue
DescriptionShort-chain dehydrogenase reductase sdr
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr12genomechr12:224544..225925 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036291NAD(P)-bd_dom_sf
IPR002347Glc/ribitol_DH
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Homology
BLAST of NO12G00620 vs. NCBI_GenBank
Match: EWM25967.1 (short-chain dehydrogenase reductase sdr, partial [Nannochloropsis gaditana])

HSP 1 Score: 364.4 bits (934), Expect = 4.000e-97
Identity = 196/269 (72.86%), Postives = 222/269 (82.53%), Query Frame = 0
Query:    1 MELPPWEVL--LTLLQTGLILLLFLVVRQVLAWKGRKHFPPLTCGSVLLTGTSSGIGRTAAVYLAQRGFTVLAGVRKESDAQALREIGVPGIHPVILDVAKLDSVQACHAHVLSLLSTKTIPPLMAVINNAGLLQDATVEFHDMDMMRHMFDVNYFGLVTVSSVFLPLLRGASSSSSSTSASFPKGRLINIGSVAGKVSFPRYGAYAASKHAVEAITDTLRAELTPAGVSVSLIQPGFCRTELFVRGVAQPELQQQQQQSHVKNDTSVS 268
            MELPP EV+  L LLQ    LLLFL++RQ   WKGRK+FPPLT GSVLLTGTSSGIGRTAAVYLAQRGFTVLAGVRKESDAQALR++GV GIHPVI+DVAK  SV+AC  HVLSLL  KT+PPL+ V+NNAGLLQDATVEFHDM  MRHMF+VNYFGL++VSS FLPLLR    SSS       +GRLINIGSV+GKVSFPRYGAYAASKHAVEA+TD+LRAEL PAGVSVSL+QPGFCRTELF+RGV      ++++++H      VS
Sbjct:   15 MELPPLEVVIKLILLQLCGTLLLFLLIRQCFVWKGRKYFPPLTSGSVLLTGTSSGIGRTAAVYLAQRGFTVLAGVRKESDAQALRDLGVSGIHPVIIDVAKASSVEACRQHVLSLLDAKTVPPLVGVVNNAGLLQDATVEFHDMAQMRHMFEVNYFGLISVSSAFLPLLRRPPGSSSPHPNH--QGRLINIGSVSGKVSFPRYGAYAASKHAVEAVTDSLRAELDPAGVSVSLVQPGFCRTELFIRGVV-----REKKEAHAAGQQIVS 276          
BLAST of NO12G00620 vs. NCBI_GenBank
Match: EWM28976.1 (short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana])

HSP 1 Score: 187.2 bits (474), Expect = 8.700e-44
Identity = 138/361 (38.23%), Postives = 195/361 (54.02%), Query Frame = 0
Query:   12 LLQTGLILLLFLVVRQVLAWKGRKHFPPL-------TCGSVLLTGTSSGIGRTAAVYLAQRGFTVLAGVRKESDAQAL---------------REIGVPG------IHPVILDVAKLDSVQACHAHVLSLLSTKTIPPLMAVINNAGLLQDA-TVEFHDMDMMRHMFDVNYFGLVTVSSVFLPLLRGASSSSSSTSASFPKGRLINIGSVAGKVSFPRYGAYAASKHAVEAITDTLRAELTPAGVSVSLIQPGFCRTELFVRGVAQPELQQQQQQSHVKNDTSVSPAAKKAYPFFYTQKFEKKNAGPMENGSDPVVVCQAMHHALTSAYPKTRYPVAKINRAKVALVFLVRQLLPDRVFDK 344
            LL  G++LL  L++  V+    RK +P L       T G VL+TG S+GIGR AA YLA++GF V AGVRK +D +AL               R  G         +H +ILD+ K   + A    V   LS +   P + ++NNAG+   A  VEF  ++  R+ F+VN++G + V+  FLPLLR A           P+GR++N+ S+AG V+ P    Y+ +K A+EA++DTLR EL   GVSVS+IQPG+ R+E+F  G A  + Q + Q+  V+            Y   YT   +K NA  +   SDP+V  +A+HHALTS YPKTRY V  +N      +     LL DR+ D+
Sbjct:   25 LLAFGIMLLAVLLLPLVVYLISRKPYPTLKTLSSTKTLGGVLVTGASTGIGRHAAFYLARQGFLVFAGVRKPADGEALLRAYLDEESKQTSKSRSRGKVSPAKQGVLHFLILDITKPFQIAAAVRSVQEELSRRGGLPFLGLVNNAGVTGGADPVEFLPLEHNRNTFEVNFYGPLAVTQAFLPLLRQA-----------PQGRIVNVSSMAGIVTRPLGATYSCTKFALEALSDTLRVELGHLGVSVSVIQPGYIRSEIF--GKADEQHQHRMQELPVE--------CSALYGHLYT--VDKTNA-LIAKASDPIVCSRAIHHALTSPYPKTRYLVGNVNGTPAYWLGWGIWLLNDRLMDR 361          
BLAST of NO12G00620 vs. NCBI_GenBank
Match: XP_004990606.1 (oxidoreductase [Salpingoeca rosetta] >EGD77262.1 oxidoreductase [Salpingoeca rosetta])

HSP 1 Score: 186.8 bits (473), Expect = 1.100e-43
Identity = 114/333 (34.23%), Postives = 186/333 (55.86%), Query Frame = 0
Query:   10 LTLLQTGLILLLFLVVRQVLAWKGRKHFPPLTCGSVLLTGTSSGIGRTAAVYLAQRGFTVLAGVRKESDAQALREIGVPGIHPVILDVAKLDSVQACHAHVLSLLSTKTIPPLMAVINNAGLLQDATVEFHDMDMMRHMFDVNYFGLVTVSSVFLPLLRGASSSSSSTSASFPKGRLINIGSVAGKVSFPRYGAYAASKHAVEAITDTLRAELTPAGVSVSLIQPGFCRTELFVRGVAQPELQQQQQQSHVKNDTSVSPAAKKAYPFFYTQKFEKKNAGPMENGSDPVVVCQAMHHALTSAYPKTRYPVAKINRAKVALVFLVRQLLPDRVFD 343
            ++L + G+++ +  V+  +L     K+FP    G++L+TGTS+GIGR AAV LA++G+TV A VRK++D  +L++ GV  + P+++DV K D + +    +      K    L+ ++NNAG+     +E HD+D +R MF+VN FG+V+V+  FLP++R              KGR++N+GS+AG ++ P   +Y+A+K  +E + D LR E+ P GVSVS+++P +  T +  +   +    +            VS   +  Y +F+   FE+K          P V  +A+ HALTS  P+TRY VA        +  L+  LLPDR+ D
Sbjct:    1 MSLCKPGVLMGILAVLLYLLFVFPVKYFPVHDSGAILITGTSTGIGRHAAVELAKKGYTVYATVRKQADVDSLKKEGVNTLIPIVMDVTKPDQIASAVDTI-----KKGGHKLIGLVNNAGISARVPLEAHDLDRIRSMFEVNVFGVVSVTQAFLPMIRE------------NKGRIVNVGSLAGFIAMPGSASYSATKFGLEGLNDALRREMAPFGVSVSIVEPAYVSTAIASKSTGEAAATRW-----------VSREMQDTYAWFFAD-FEEKRLKGEALADGPEVTTKAITHALTSRTPETRYIVANTYGIPAKIAALINWLLPDRLGD 304          
BLAST of NO12G00620 vs. NCBI_GenBank
Match: XP_005855962.1 (short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana CCMP526] >EKU20405.1 short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 186.8 bits (473), Expect = 1.100e-43
Identity = 138/363 (38.02%), Postives = 195/363 (53.72%), Query Frame = 0
Query:   12 LLQTGLILLLFLVVRQVLAWKGRKHFPPL-------TCGSVLLTGTSSGIGRTAAVYLAQRGFTVLAGVRKESDAQALREI-----------------------GVPGIHPVILDVAKLDSVQACHAHVLSLLSTKTIPPLMAVINNAGLLQDA-TVEFHDMDMMRHMFDVNYFGLVTVSSVFLPLLRGASSSSSSTSASFPKGRLINIGSVAGKVSFPRYGAYAASKHAVEAITDTLRAELTPAGVSVSLIQPGFCRTELFVRGVAQPELQQQQQQSHVKNDTSVSPAAKKAYPFFYTQKFEKKNAGPMENGSDPVVVCQAMHHALTSAYPKTRYPVAKINRAKVALVFLVRQLLPDRVFDK 344
            LL  G++LL  L++  V+    RK +P L       T G VL+TG S+GIGR AA YLA++GF V AGVRK +D +AL +                        GV  +H +ILD+ K   + A    V   LS +   P + ++NNAG+   A  VEF  ++  R+ F+VN++G + V+  FLPLLR A           P+GR+IN+ S+AG V+ P    Y+ +K A+EA++DTLR EL   GVSVS+IQPG+ R+E+F  G A  + Q + Q+        +       Y   YT   +K NA  +   SDP+V  +A+HHALTS YPKTRY V  +N      +     LL DR+ D+
Sbjct:   14 LLAFGIMLLAVLLLPLVVYLISRKPYPTLKTLSSTKTLGGVLVTGASTGIGRHAAFYLARQGFLVFAGVRKPADGEALLKAYLDEESKQTSKSRSRGKVSPAKQGV--LHYLILDITKPFQIAAAVRSVQEELSRRGGLPFLGLVNNAGVTGGADPVEFLPLEHNRNTFEVNFYGPLAVTQAFLPLLRQA-----------PQGRIINVSSMAGIVTRPLGATYSCTKFALEALSDTLRVELGHLGVSVSVIQPGYIRSEIF--GKADEQHQHRMQE--------LPEECSALYGHLYT--VDKTNA-LIAKASDPIVCSRAIHHALTSPYPKTRYLVGNVNGTPAYWLGWGIWLLNDRLMDR 350          
BLAST of NO12G00620 vs. NCBI_GenBank
Match: XP_005854162.1 (short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana CCMP526] >EKU22195.1 short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana CCMP526] >EWM23126.1 short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana])

HSP 1 Score: 181.8 bits (460), Expect = 3.700e-42
Identity = 117/327 (35.78%), Postives = 178/327 (54.43%), Query Frame = 0
Query:   20 LLFLVVRQVLAWKGRKHFPPLTCGSVLLTGTSSGIGRTAAVYLAQR--GFTVLAGVRKESDAQALREIGVPGIHPVILDVAKLDSVQACHAHVLSLLSTKTIPPLMAVINNAGLLQDATVEFHDMDMMRHMFDVNYFGLVTVSSVFLPLLRGASSSSSSTSASFPKGRLINIGSVAGKVSFPRYGAYAASKHAVEAITDTLRAELT-PAGVSVSLIQPGFCRTELFVRGVAQPELQQQQQQSHVKNDTSVSPAAKKAY-PFFYTQKFEKKNAGPMENGSDPVVVCQAMHHALTSAYPKTRYPVAKINRAKVALVFLVRQLLPDRVFD 343
            ++F +V   + +  RK FP  T G++L+TG S+GIG  AA++LA      TV AGVRK+ DA+ ++ + +  + P+ +D     S+ A  A + S     T  P++ +INNAG+  ++ +EF  M  +R + + N  G   ++   +P LR +            +GR++ I SV GKV+    GAY ASKHA EA++D LR EL+ P GVSVS+++P + RTE+F  G  Q E+           +T +SP  +  Y PFFY +    +    +  G  PVV   A+ HAL + YPKTRY VA     +  L   +  +LPDR+ D
Sbjct:   13 VIFALVPFAVEFLTRKSFPVHTTGAILVTGASTGIGNHAAIHLATHYPDVTVYAGVRKDVDAENIKALHLSNLLPLHIDTTDQSSMDAAVAFLHS-----TSLPIIGLINNAGVSTNSPIEFLPMAKLRQLLETNVVGPTYLTQQLIPSLRAS------------QGRVVQISSVLGKVTLATRGAYCASKHAFEALSDVLRLELSGPFGVSVSVVEPAYVRTEIF--GKIQQEI-----------ETLLSPELRSLYGPFFYREDQAARKKAQIAKGDSPVVTSTAIEHALFADYPKTRYVVANFAGVRADLCLFIAWMLPDRLAD 309          
BLAST of NO12G00620 vs. NCBI_GenBank
Match: EWM24343.1 (short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana])

HSP 1 Score: 180.6 bits (457), Expect = 8.200e-42
Identity = 121/338 (35.80%), Postives = 182/338 (53.85%), Query Frame = 0
Query:   11 TLLQTGLILLLFLVVRQVLAWKGRKHF--PPLTCGSVLLTGTSSGIGRTAAVYLAQRGFTVLAGVRKESDAQALREIGVPGIHPVILDVAKLDSVQACHAHVLSLLSTKTIPPLMAVINNAGLLQDATVEFHDMDMMRHMFDVNYFGLVTVSSVFLPLLRGASSSSSSTSASFPKGRLINIGSVAGKVSFPRYGAYAASKHAVEAITDTLRAELTPAGVSVSLIQPGFCRTELFVRGVAQPELQQQQQQSHVKNDTSVSPAAKKAYPFFYTQKFEKKNAGPMENGSDPVVVCQAMHHALTSAYPKTRYPVAKINRAKVALVFLVRQLLPDRVFDKSFL 347
            T+L+  LI LL  ++  +L +  R+ +  PP    +V+L+G S+GIG  AAV+LA   F V AGVRKE DA+ LR +G   + PVILDV   DS+   +  + +  + + I P+  ++NNAG++  +TVE HD+  M+ ++DVN +G++ ++  FLPLLR  +            GR++ I S+AG ++ PR   Y +SKHA+E+++D LR EL    VSV+++QPG  R+ +F       E  Q   Q+ +  D    P   K Y        E      M     P    +A+  AL   YPKTR  VA I+         ++ +LPDRV DK  L
Sbjct:   92 TMLKIFLIGLLLSLIPLLLNYASRREYPTPPSGGAAVVLSGASTGIGYDAAVHLAD-DFVVYAGVRKEKDAEMLRSVGKSTLVPVILDVTSQDSIDEAYVKITADAAERGI-PVWGLVNNAGIMTASTVEHHDVAGMQKIYDVNVWGVLRLTQKFLPLLRAQA------------GRIVQISSIAGFLTIPRASGYCSSKHALESLSDGLRLELAHYNVSVTVVQPGAVRSAIF-------EKSQSASQAKLAED----PRELKVYGHMIK---EGSTDSIMAKADTPDCTTKAIRQALMDRYPKTREVVANIDGLPAIFAHYMKHMLPDRVLDKMLL 401          
BLAST of NO12G00620 vs. NCBI_GenBank
Match: EWM25314.1 (short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana])

HSP 1 Score: 179.9 bits (455), Expect = 1.400e-41
Identity = 108/310 (34.84%), Postives = 168/310 (54.19%), Query Frame = 0
Query:   34 RKHFP-PLTCGSVLLTGTSSGIGRTAAVYLAQRGFTVLAGVRKESDAQALREIGVPGIHPVILDVAKLDSVQACHAHVLSLLSTKTIPPLMAVINNAGLLQDATVEFHDMDMMRHMFDVNYFGLVTVSSVFLPLLRGASSSSSSTSASFPKGRLINIGSVAGKVSFPRYGAYAASKHAVEAITDTLRAELTPAGVSVSLIQPGFCRTELFVRGVAQPELQQQQQQSHVKNDTSVSPAAKKAYPFFYTQKFEKKNAGPMENGSDPVVVCQAMHHALTSAYPKTRYPVAKINRAKVALVFLVRQLLPDRVFD 343
            RK FP P   G++++TG S+GIG  AA +LA++G+ V   VRK +D +A++ +G+P + P+I+DVA+  S++     +L+ LS   I PL+ ++NNAG+ Q   +EFH +  +R MFD++  G + ++   LP +R              KGR++N+ S+   V  P   AY ASK AVE I+D LR EL     SVS++QP +  T +F           ++    +     VSP     Y +F+  +   K+   ++  S P V   A+ HALTS YP TRY VA ++      +  +  L PDR+ D
Sbjct:   38 RKRFPVPPKGGAIVITGASTGIGNHAAQHLARQGYIVYCTVRKPADVEAIQALGLPNLRPIIMDVAQAKSIENGAETILAELSKNNI-PLIGLVNNAGVAQKFPLEFHPLTDLRSMFDIHVIGPLELTQRLLPAIRA------------NKGRIVNLSSITALVLLPTGAAYGASKLAVEGISDGLRRELVDFDCSVSIVQPAYVNTAIF-----------KKVTQSIDTKVEVSPEIMTTYGYFFRTEKRIKDRAAVDKASPPSVTTDAITHALTSPYPHTRYIVANVSGIPAFWLGWLVWLCPDRLAD 323          
BLAST of NO12G00620 vs. NCBI_GenBank
Match: XP_005855590.1 (short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana CCMP526] >EKU20782.1 short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 178.7 bits (452), Expect = 3.100e-41
Identity = 120/337 (35.61%), Postives = 181/337 (53.71%), Query Frame = 0
Query:   12 LLQTGLILLLFLVVRQVLAWKGRKHF--PPLTCGSVLLTGTSSGIGRTAAVYLAQRGFTVLAGVRKESDAQALREIGVPGIHPVILDVAKLDSVQACHAHVLSLLSTKTIPPLMAVINNAGLLQDATVEFHDMDMMRHMFDVNYFGLVTVSSVFLPLLRGASSSSSSTSASFPKGRLINIGSVAGKVSFPRYGAYAASKHAVEAITDTLRAELTPAGVSVSLIQPGFCRTELFVRGVAQPELQQQQQQSHVKNDTSVSPAAKKAYPFFYTQKFEKKNAGPMENGSDPVVVCQAMHHALTSAYPKTRYPVAKINRAKVALVFLVRQLLPDRVFDKSFL 347
            +L+  LI LL  ++  +L +  R+ +  PP    +V+L+G S+GIG  AAV+LA   F V AGVRKE DA+ LR +G   + PVILDV   DS+   +  + +  + + I P+  ++NNAG++  +TVE HD+  M+ ++DVN +G++ ++  FLPLLR  +            GR++ I S+AG ++ PR   Y +SKHA+E+++D LR EL    VSV+++QPG  R+ +F       E  Q   Q+ +  D    P   K Y        E      M     P    +A+  AL   YPKTR  VA I+         ++ +LPDRV DK  L
Sbjct:    1 MLKIFLIGLLLSLIPLLLNYASRREYPTPPSGGAAVVLSGASTGIGYDAAVHLAD-DFVVYAGVRKEKDAEMLRSVGKSTLVPVILDVTSQDSIDEAYVKITADAAERGI-PVWGLVNNAGIMTASTVEHHDVAGMQKIYDVNVWGVLRLTQKFLPLLRAQA------------GRIVQISSIAGFLTIPRASGYCSSKHALESLSDGLRLELAHYNVSVTVVQPGAVRSAIF-------EKSQSASQAKLAED----PRELKVYGHMIK---EGSTDSIMAKADTPDCTTKAIRQALMDRYPKTREVVANIDGLPAIFAHYMKHMLPDRVLDKMLL 309          
BLAST of NO12G00620 vs. NCBI_GenBank
Match: WP_099702301.1 (SDR family NAD(P)-dependent oxidoreductase [Chroococcales cyanobacterium IPPAS B-1203] >PIG92262.1 short-chain dehydrogenase/reductase [Chroococcales cyanobacterium IPPAS B-1203])

HSP 1 Score: 177.6 bits (449), Expect = 6.900e-41
Identity = 115/306 (37.58%), Postives = 170/306 (55.56%), Query Frame = 0
Query:   40 LTCGSVLLTGTSSGIGRTAAVYLAQRGFTVLAGVRKESDAQALREIGVPGIHPVILDVAKLDSVQACHAHVLSLLSTKTIPPLMAVINNAGLLQDATVEFHDMDMMRHMFDVNYFGLVTVSSVFLPLLRGASSSSSSTSASFPKGRLINIGSVAGKVSFPRYGAYAASKHAVEAITDTLRAELTPAGVSVSLIQPGFCRTELFVRGVAQPELQQQQ--QQSHVKNDTSVSPAAKKAYPFFYTQKFEKKNAGPMENGSDPVVVCQAMHHALTSAYPKTRYPVAKINRAKVALVFLVRQLLPDRVFDK 344
            +T G+V++TG S+GIG   A+ L Q GF V AGVRKE+DAQAL++   P + P+ LDV+ LDS+ A   +V   +       L+ ++NNAG+   A +EF  +   R   +VN    + V+  FLPLLR A            +GR++N+GS+ G+ + P  GAY+ASK A+EA+TD LR EL P G+ V++I+PG   T ++ + +AQ ++ QQ     +H     ++  A+K A             A   + G  P  V QA+  ALT+  PKTRY V +  R +  L F     LPDR+ D+
Sbjct:    4 VTKGAVVITGASTGIGAACAIRLDQLGFQVFAGVRKEADAQALQQTASPKLTPIFLDVSDLDSIAASVENVAIAVENSA---LIGLVNNAGIAVAAPLEFIPITEFRRQLEVNTTAQLAVTQAFLPLLRSA------------RGRIVNMGSITGRSATPFLGAYSASKFALEALTDALRLELRPWGIWVAIIEPGAIATPIWQKSLAQADILQQNLPYSAHELYGRAMDTASKGA-------------ANLAQKGISPDQVAQAVVRALTAKRPKTRYLVGQDARIRAMLKF-----LPDRIVDE 276          
BLAST of NO12G00620 vs. NCBI_GenBank
Match: XP_005855521.1 (1-acylglycerone phosphate reductase, partial [Nannochloropsis gaditana CCMP526] >EKU20840.1 1-acylglycerone phosphate reductase, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 176.4 bits (446), Expect = 1.500e-40
Identity = 103/290 (35.52%), Postives = 160/290 (55.17%), Query Frame = 0
Query:   34 RKHFP-PLTCGSVLLTGTSSGIGRTAAVYLAQRGFTVLAGVRKESDAQALREIGVPGIHPVILDVAKLDSVQACHAHVLSLLSTKTIPPLMAVINNAGLLQDATVEFHDMDMMRHMFDVNYFGLVTVSSVFLPLLRGASSSSSSTSASFPKGRLINIGSVAGKVSFPRYGAYAASKHAVEAITDTLRAELTPAGVSVSLIQPGFCRTELFVRGVAQPELQQQQQQSHVKNDTSVSPAAKKAYPFFYTQKFEKKNAGPMENGSDPVVVCQAMHHALTSAYPKTRYPVAKIN 323
            RK FP P   G++++TG S+GIG  AA +LA++G+ V   VRK +D +A++ +G+P + P+I+DVA+  S++     +L+ LS   I PL+ ++NNAG+ Q   +EFH +  +R MFD++  G + ++   LP +R              KGR++N+ S+   V  P   AY ASK AVE I+D LR EL     SVS++QP +  T +F           ++    +     VSP     Y +F+  +   K+   ++  S P V   A+ HALTS YP TRY VA ++
Sbjct:   46 RKRFPVPPKGGAIVITGASTGIGNHAAQHLARQGYIVYCTVRKPADVEAIQALGLPNLRPIIMDVAQAKSIENGAETILAELSKNNI-PLIGLVNNAGVAQKFPLEFHPLTDLRSMFDIHVIGPLELTQRLLPAIRA------------NKGRIVNLSSITALVLLPTGAAYGASKLAVEGISDGLRRELVDFDCSVSIVQPAYVNTAIF-----------KKVTQSIDTKVEVSPEIMTTYGYFFRTEKRIKDRAAVDKASPPSVTTDAITHALTSPYPHTRYIVANVS 311          
The following BLAST results are available for this feature:
BLAST of NO12G00620 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM25967.14.000e-9772.86short-chain dehydrogenase reductase sdr, partial [... [more]
EWM28976.18.700e-4438.23short-chain dehydrogenase reductase sdr [Nannochlo... [more]
XP_004990606.11.100e-4334.23oxidoreductase [Salpingoeca rosetta] >EGD77262.1 o... [more]
XP_005855962.11.100e-4338.02short-chain dehydrogenase reductase sdr [Nannochlo... [more]
XP_005854162.13.700e-4235.78short-chain dehydrogenase reductase sdr [Nannochlo... [more]
EWM24343.18.200e-4235.80short-chain dehydrogenase reductase sdr [Nannochlo... [more]
EWM25314.11.400e-4134.84short-chain dehydrogenase reductase sdr [Nannochlo... [more]
XP_005855590.13.100e-4135.61short-chain dehydrogenase reductase sdr [Nannochlo... [more]
WP_099702301.16.900e-4137.58SDR family NAD(P)-dependent oxidoreductase [Chrooc... [more]
XP_005855521.11.500e-4035.521-acylglycerone phosphate reductase, partial [Nann... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL128nonsL128Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL124nonsL124Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR070ncniR070Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR011ngnoR011Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR006ngnoR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK009951NSK009951Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO12G00620.1NO12G00620.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|610313gene_9976Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_101394g1gene4555Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO12G00620.1NO12G00620.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO12G00620 ID=NO12G00620|Name=NO12G00620|organism=Nannochloropsis oceanica|type=gene|length=1382bp
ATGGAGCTTCCCCCGTGGGAGGTATTACTCACACTTCTCCAAACCGGCTT
AATCCTGCTGCTTTTCCTCGTCGTTCGCCAAGTTCTCGCCTGGAAGGGCC
GCAAGCACTTCCCTCCCTTGACCTGTGGTAGCGTTCTCCTCACAGGCACC
AGCAGTGGAATCGGTCGCACCGCAGCCGTGTACCTGGCCCAGCGTGGGTT
CACAGTGTTGGCTGGGGTACGCAAGGAGAGCGATGCACAGGCGTTGCGAG
AGATTGGGGTGCCCGGGATCCACCCTGTGATTCTTGATGTGGCCAAGCTG
GACAGCGTGCAGGCTTGCCATGCCCACGTCCTCTCGCTCCTCTCCACCAA
GACCATCCCCCCCCTCATGGCCGTCATTAACAACGCTGGACTCCTTCAAG
ATGCCACGGTAGAATTCCACGATATGGACATGATGCGGCACATGTTCGAC
GTTAACTACTTTGGGCTCGTCACCGTCTCCTCCGTCTTCCTACCCCTCCT
CCGTGGCGCGTCTTCCTCCTCCTCCTCCACCTCCGCCTCTTTCCCAAAAG
GACGACTCATTAATATCGGCTCCGTCGCTGGCAAGGTGTCCTTTCCTCGC
TACGGGGCCTATGCCGCAAGCAAGCACGCAGTGGAAGCCATCACCGACAC
GCTCCGCGCCGAGCTAACCCCAGCCGGAGTGAGTGTCTCCTTGATCCAGC
CGGGCTTCTGTCGAACGGAGTTGTTTGTCCGCGGAGTGGCTCAACCGGAG
CTACAGCAGCAGCAACAGCAGTCGCATGTCAAGAATGATACGgtgagtga
gtgattgatgcgtgagggaggaaggaaggaggaggaggaggaggtggagg
aggaggaggaggaggaggaggaggaggaggaggaggaggaggggaaaagc
agagcagcaaataagttgacaaccccctccgccctccctccctccacgct
tccctccctcgcttagTCCGTGTCTCCTGCAGCCAAGAAAGCCTATCCGT
TTTTCTACACTCAAAAATTTGAAAAGAAAAACGCCGGACCGATGGAAAAC
GGCTCGGACCCTGTGGTGGTCTGTCAGgcaggaaggggggggtgagggaa
gggagggagcgaggagggagcggggagaggtgtttttaatgtacttgcat
ttcacttctatctccacccttccacggctacaacctgtggagctgaacct
cctcctatcctctcatccctccctccttccctcagGCCATGCACCATGCT
CTGACCAGCGCGTACCCCAAGACACGTTATCCCGTCGCGAAGATAAACCG
AGCGAAAGTGGCGCTGGTGTTTCTCGTGCGTCAGTTGCTTCCCGATCGCG
TTTTTGATAAGAGCTTTCTGCTGAACGTATAA
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protein sequence of NO12G00620.1

>NO12G00620.1-protein ID=NO12G00620.1-protein|Name=NO12G00620.1|organism=Nannochloropsis oceanica|type=polypeptide|length=350bp
MELPPWEVLLTLLQTGLILLLFLVVRQVLAWKGRKHFPPLTCGSVLLTGT
SSGIGRTAAVYLAQRGFTVLAGVRKESDAQALREIGVPGIHPVILDVAKL
DSVQACHAHVLSLLSTKTIPPLMAVINNAGLLQDATVEFHDMDMMRHMFD
VNYFGLVTVSSVFLPLLRGASSSSSSTSASFPKGRLINIGSVAGKVSFPR
YGAYAASKHAVEAITDTLRAELTPAGVSVSLIQPGFCRTELFVRGVAQPE
LQQQQQQSHVKNDTSVSPAAKKAYPFFYTQKFEKKNAGPMENGSDPVVVC
QAMHHALTSAYPKTRYPVAKINRAKVALVFLVRQLLPDRVFDKSFLLNV*
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Synonyms
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