NO12G00610, NO12G00610 (gene) Nannochloropsis oceanica

Overview
NameNO12G00610
Unique NameNO12G00610
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3193
Alignment locationchr12:220900..224092 +

Link to JBrowse

Properties
Property NameValue
Descriptionphospholipid/glycerol acyltransferase family protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr12genomechr12:220900..224092 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006650glycerophospholipid metabolic process
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004366glycerol-3-phosphate O-acyltransferase activity
GO:0016746transferase activity, transferring acyl groups
Vocabulary: INTERPRO
TermDefinition
IPR016222G3P_O-acylTrfase_chlp
IPR002123Plipid/glycerol_acylTrfase
Homology
[Close]
BLAST of NO12G00610 vs. NCBI_GenBank
Match: WP_052354834.1 (glycerol-3-phosphate acyltransferase [Candidatus Protochlamydia sp. R18])

HSP 1 Score: 222.2 bits (565), Expect = 3.000e-54
Identity = 114/263 (43.35%), Postives = 164/263 (62.36%), Query Frame = 0 
Query:  110 LMKEAAENSRSLYQFEPFHKNIRGPVDFTAFGENFFDILCVKEQSGVLGRKNMAKIVDYVRQGHNVVLLANHQTEPDPYILRSAFKRLVPADDPLLDRLVFVAGAKVRTDLFTIPFSKGLNLICIHSKKYIEDDPATKPLKTQENLAAMKALQGLIVEGGHILWVAPSGGRDRTDVHTGKMAVAPFDSRAVDMFRVLSTKSQHPTHFFPLSMLTAQVLPPPAKVAMEVGERRLVARRPVHVYFGDELTPERVG-SEFVARKMK 372
            L + A + S + YQFE FH++IR P D+  FG +F   L   E+S VLGR+ +AKI   + QG NV+LLANHQTEPDP IL    + +   D  L   ++F+AG +V +D   IP S G NL+CI+SKK+I   P  K  K   N   M+ +  L+ EGG  ++VAPSGGRDR +   G++ +APFD ++++MF +++ ++ HPTHF+PLS+ T  ++PPP  V  E+GE+R     PVH+ F  E+  E    SE + +K K
Sbjct:   52 LFELAMQQSENPYQFEIFHQSIRSPFDYYQFGLDFIRPLINFEKSTVLGREQLAKIYQQMAQGDNVILLANHQTEPDPQILSLMLENI---DKKLATEMIFIAGHRVISDPLAIPMSMGRNLLCIYSKKHISHPPEKKTQKVSHNQRTMRKMSELLSEGGRCIYVAPSGGRDRRN-SEGQITIAPFDPQSLEMFWLMAQQADHPTHFYPLSLHTYDLMPPPRHVEKELGEKRTAQFTPVHLAFSSEIDMEHFSESEHLDKKTK 310
[Close]
BLAST of NO12G00610 vs. NCBI_GenBank
Match: KIC71259.1 (Glycerol-3-phosphate acyltransferase, chloroplastic [Candidatus Protochlamydia amoebophila])

HSP 1 Score: 221.9 bits (564), Expect = 3.900e-54
Identity = 114/263 (43.35%), Postives = 164/263 (62.36%), Query Frame = 0 
Query:  110 LMKEAAENSRSLYQFEPFHKNIRGPVDFTAFGENFFDILCVKEQSGVLGRKNMAKIVDYVRQGHNVVLLANHQTEPDPYILRSAFKRLVPADDPLLDRLVFVAGAKVRTDLFTIPFSKGLNLICIHSKKYIEDDPATKPLKTQENLAAMKALQGLIVEGGHILWVAPSGGRDRTDVHTGKMAVAPFDSRAVDMFRVLSTKSQHPTHFFPLSMLTAQVLPPPAKVAMEVGERRLVARRPVHVYFGDELTPERVG-SEFVARKMK 372
            L + A + S + YQFE FH++IR P D+  FG +F   L   E+S VLGR+ +AKI   + QG NV+LLANHQTEPDP IL    + +   D  L   ++F+AG +V +D   IP S G NL+CI+SKK+I   P  K  K   N   M+ +  L+ EGG  ++VAPSGGRDR +   G++ +APFD ++++MF +++ ++ HPTHF+PLS+ T  ++PPP  V  E+GE+R     PVH+ F  E+  E    SE + +K K
Sbjct:   54 LFELAMKQSENPYQFEIFHQSIRSPFDYYQFGLDFIRPLINFEKSTVLGREQLAKIYQQMAQGDNVILLANHQTEPDPQILSLMLENI---DKKLATEMIFIAGHRVISDPLAIPMSMGRNLLCIYSKKHISHPPEKKTQKVSHNQRTMRKMSELLSEGGRCIYVAPSGGRDRRN-SEGQITIAPFDPQSLEMFWLMAQQADHPTHFYPLSLHTYDLMPPPKHVEKELGEKRTAQFTPVHLAFSSEIDMEHFSESEHLDKKTK 312
[Close]
BLAST of NO12G00610 vs. NCBI_GenBank
Match: WP_039359645.1 (glycerol-3-phosphate acyltransferase [Candidatus Protochlamydia amoebophila])

HSP 1 Score: 221.9 bits (564), Expect = 3.900e-54
Identity = 114/263 (43.35%), Postives = 164/263 (62.36%), Query Frame = 0 
Query:  110 LMKEAAENSRSLYQFEPFHKNIRGPVDFTAFGENFFDILCVKEQSGVLGRKNMAKIVDYVRQGHNVVLLANHQTEPDPYILRSAFKRLVPADDPLLDRLVFVAGAKVRTDLFTIPFSKGLNLICIHSKKYIEDDPATKPLKTQENLAAMKALQGLIVEGGHILWVAPSGGRDRTDVHTGKMAVAPFDSRAVDMFRVLSTKSQHPTHFFPLSMLTAQVLPPPAKVAMEVGERRLVARRPVHVYFGDELTPERVG-SEFVARKMK 372
            L + A + S + YQFE FH++IR P D+  FG +F   L   E+S VLGR+ +AKI   + QG NV+LLANHQTEPDP IL    + +   D  L   ++F+AG +V +D   IP S G NL+CI+SKK+I   P  K  K   N   M+ +  L+ EGG  ++VAPSGGRDR +   G++ +APFD ++++MF +++ ++ HPTHF+PLS+ T  ++PPP  V  E+GE+R     PVH+ F  E+  E    SE + +K K
Sbjct:   52 LFELAMKQSENPYQFEIFHQSIRSPFDYYQFGLDFIRPLINFEKSTVLGREQLAKIYQQMAQGDNVILLANHQTEPDPQILSLMLENI---DKKLATEMIFIAGHRVISDPLAIPMSMGRNLLCIYSKKHISHPPEKKTQKVSHNQRTMRKMSELLSEGGRCIYVAPSGGRDRRN-SEGQITIAPFDPQSLEMFWLMAQQADHPTHFYPLSLHTYDLMPPPKHVEKELGEKRTAQFTPVHLAFSSEIDMEHFSESEHLDKKTK 310
[Close]
BLAST of NO12G00610 vs. NCBI_GenBank
Match: WP_044045094.1 (glycerol-3-phosphate acyltransferase [Candidatus Protochlamydia amoebophila])

HSP 1 Score: 221.9 bits (564), Expect = 3.900e-54
Identity = 114/263 (43.35%), Postives = 164/263 (62.36%), Query Frame = 0 
Query:  110 LMKEAAENSRSLYQFEPFHKNIRGPVDFTAFGENFFDILCVKEQSGVLGRKNMAKIVDYVRQGHNVVLLANHQTEPDPYILRSAFKRLVPADDPLLDRLVFVAGAKVRTDLFTIPFSKGLNLICIHSKKYIEDDPATKPLKTQENLAAMKALQGLIVEGGHILWVAPSGGRDRTDVHTGKMAVAPFDSRAVDMFRVLSTKSQHPTHFFPLSMLTAQVLPPPAKVAMEVGERRLVARRPVHVYFGDELTPERVG-SEFVARKMK 372
            L + A + S + YQFE FH++IR P D+  FG +F   L   E+S VLGR+ +AKI   + QG NV+LLANHQTEPDP IL    + +   D  L   ++F+AG +V +D   IP S G NL+CI+SKK+I   P  K  K   N   M+ +  L+ EGG  ++VAPSGGRDR +   G++ +APFD ++++MF +++ ++ HPTHF+PLS+ T  ++PPP  V  E+GE+R     PVH+ F  E+  E    SE + +K K
Sbjct:   52 LFELAMKQSENPYQFEIFHQSIRSPFDYYQFGLDFIRPLINFEKSTVLGREQLAKIYQQMAQGDNVILLANHQTEPDPQILSLMLENI---DKKLATEMIFIAGHRVISDPLAIPMSMGRNLLCIYSKKHISHPPEKKTQKVSHNQRTMRKMSELLSEGGRCIYVAPSGGRDRRN-SEGQITIAPFDPQSLEMFWLMAQQADHPTHFYPLSLHTYDLMPPPKHVEKELGEKRTAQFTPVHLAFSSEIDMEHFSESEHLDKKTK 310
[Close]
BLAST of NO12G00610 vs. NCBI_GenBank
Match: CAF24042.1 (putative glycerol-3-phosphate acyltransferase [Candidatus Protochlamydia amoebophila UWE25])

HSP 1 Score: 221.9 bits (564), Expect = 3.900e-54
Identity = 114/263 (43.35%), Postives = 164/263 (62.36%), Query Frame = 0 
Query:  110 LMKEAAENSRSLYQFEPFHKNIRGPVDFTAFGENFFDILCVKEQSGVLGRKNMAKIVDYVRQGHNVVLLANHQTEPDPYILRSAFKRLVPADDPLLDRLVFVAGAKVRTDLFTIPFSKGLNLICIHSKKYIEDDPATKPLKTQENLAAMKALQGLIVEGGHILWVAPSGGRDRTDVHTGKMAVAPFDSRAVDMFRVLSTKSQHPTHFFPLSMLTAQVLPPPAKVAMEVGERRLVARRPVHVYFGDELTPERVG-SEFVARKMK 372
            L + A + S + YQFE FH++IR P D+  FG +F   L   E+S VLGR+ +AKI   + QG NV+LLANHQTEPDP IL    + +   D  L   ++F+AG +V +D   IP S G NL+CI+SKK+I   P  K  K   N   M+ +  L+ EGG  ++VAPSGGRDR +   G++ +APFD ++++MF +++ ++ HPTHF+PLS+ T  ++PPP  V  E+GE+R     PVH+ F  E+  E    SE + +K K
Sbjct:   54 LFELAMKQSENPYQFEIFHQSIRSPFDYYQFGLDFIRPLINFEKSTVLGREQLAKIYQQMAQGDNVILLANHQTEPDPQILSLMLENI---DKKLATEMIFIAGHRVISDPLAIPMSMGRNLLCIYSKKHISHPPEKKTQKVSHNQRTMRKMSELLSEGGRCIYVAPSGGRDRRN-SEGQITIAPFDPQSLEMFWLMAQQADHPTHFYPLSLHTYDLMPPPKHVEKELGEKRTAQFTPVHLAFSSEIDMEHFSESEHLDKKTK 312
[Close]
BLAST of NO12G00610 vs. NCBI_GenBank
Match: WP_075883401.1 (glycerol-3-phosphate acyltransferase [Candidatus Protochlamydia sp. W-9])

HSP 1 Score: 221.5 bits (563), Expect = 5.100e-54
Identity = 114/263 (43.35%), Postives = 165/263 (62.74%), Query Frame = 0 
Query:  110 LMKEAAENSRSLYQFEPFHKNIRGPVDFTAFGENFFDILCVKEQSGVLGRKNMAKIVDYVRQGHNVVLLANHQTEPDPYILRSAFKRLVPADDPLLDRLVFVAGAKVRTDLFTIPFSKGLNLICIHSKKYIEDDPATKPLKTQENLAAMKALQGLIVEGGHILWVAPSGGRDRTDVHTGKMAVAPFDSRAVDMFRVLSTKSQHPTHFFPLSMLTAQVLPPPAKVAMEVGERRLVARRPVHVYFGDELTPERVG-SEFVARKMK 372
            L + A + S + YQFE FH++IR P D+  FG +F   L   E+S VLGR+ +AKI   + QG NV+LLANHQTEPDP IL    + +   D  L   ++F+AG +V +D   IP S G NL+CI+SKK+I   P  K  K   N   M+ +  L+ EGG  ++VAPSGGRDR +   G++ +APFD ++++MF +++ ++ HPTHF+PLS+ T  ++PPP  V  E+GE+R     PVH+ F  E+  +R   SE + +K K
Sbjct:   52 LFELAMKQSENPYQFEIFHQSIRSPFDYYQFGLDFIRPLINFEKSTVLGREQLAKICQQMAQGDNVILLANHQTEPDPQILSLMLENI---DKKLATEMIFIAGHRVISDPLAIPMSMGRNLLCIYSKKHISHPPEKKTQKVSHNQRTMRKMSELLSEGGRCIYVAPSGGRDRRN-SEGQITIAPFDPQSLEMFWLMAQQADHPTHFYPLSLHTYDLMPPPKHVEKELGEKRTAQFSPVHLAFSAEIDMKRFSESEHLDKKTK 310
[Close]
BLAST of NO12G00610 vs. NCBI_GenBank
Match: WP_042104386.1 (hypothetical protein [Parachlamydiaceae bacterium HS-T3])

HSP 1 Score: 216.9 bits (551), Expect = 1.200e-52
Identity = 112/284 (39.44%), Postives = 164/284 (57.75%), Query Frame = 0 
Query:   73 KLPDQFQQALTDILDGMTEVAENTGLDPEKYQEMLGLLMKEAAENSRSLYQFEPFHKNIRGPVDFTAFGENFFDILCVKEQSGVLGRKNMAKIVDYVRQGHNVVLLANHQTEPDPYILRSAFKRLVPADDPLLDRLVFVAGAKVRTDLFTIPFSKGLNLICIHSKKYIEDDPATKPLKTQENLAAMKALQGLIVEGGHILWVAPSGGRDRTDVHTGKMAVAPFDSRAVDMFRVLSTKSQHPTHFFPLSMLTAQVLPPPAKVAMEVGERRLVARRPVHVYFGDEL 357
            KLPD+  Q L    +      +  G       EM+  L  EAA    + + F+P+H+ I  P D+  +G   F  L   + S V G   + +I  Y++ G NV+L ANHQTEPDP ++    +   P    L   +VF+AG +V TD   +PFSKG NL+CI+SKK+IED P  K  K   N   +K +  L+ +GG  ++VAPSGGRDR +   GK+ VAPFD +++D+F +L+ K+   THFFPL++ T  +LPPP+ V  ++GERR     P +++FG E+
Sbjct:   16 KLPDELAQNLYRFYESYVAAIQKNGYTEAYADEMVSQLAHEAARQIEAPFHFQPYHQRILEPFDYYHYGIKLFKPLIDMKLSKVRGLAQVDQIDRYLKAGDNVILFANHQTEPDPQVISILLENSHP---QLAGEMVFIAGHRVTTDPLAVPFSKGRNLLCIYSKKHIEDPPELKANKLLHNQRTLKKMGELLDQGGICIYVAPSGGRDRLNAE-GKIEVAPFDPQSIDLFFLLAQKASKTTHFFPLALSTFHLLPPPSSVEKQIGERRHANSIPTYLFFGKEI 295
[Close]
BLAST of NO12G00610 vs. NCBI_GenBank
Match: WP_006340240.1 (glycerol-3-phosphate acyltransferase [Parachlamydia acanthamoebae] >EFB42512.1 hypothetical protein pah_c005o047 [Parachlamydia acanthamoebae str. Hall's coccus])

HSP 1 Score: 216.1 bits (549), Expect = 2.100e-52
Identity = 112/299 (37.46%), Postives = 173/299 (57.86%), Query Frame = 0 
Query:   74 LPDQFQQALTDILDGMTEVAENTGLDPEKYQEMLGLLMKEAAENSRSLYQFEPFHKNIRGPVDFTAFGENFFDILCVKEQSGVLGRKNMAKIVDYVRQGHNVVLLANHQTEPDPYILRSAFKRLVPADDPLLDRLVFVAGAKVRTDLFTIPFSKGLNLICIHSKKYIEDDPATKPLKTQENLAAMKALQGLIVEGGHILWVAPSGGRDRTDVHTGKMAVAPFDSRAVDMFRVLSTKSQHPTHFFPLSMLTAQVLPPPAKVAMEVGERRLVARRPVHVYFGDELTPERV-GSEFVARKMK 372
            + + F QAL +      E   + G     ++ +    +    E  RS + FEPFH+ I  P ++  FG ++   L   ++S V   + + ++V+ + + HNV+L ANHQTEPDP  +    +   P      + ++FVAG +V  D   +PFSKG NL+CI+SKKY E+ P  K  K Q N   MK +  L+ EGG  ++VAPSGGRDR D H G++ VAPF+ ++++MF ++S ++QHPTHF+PL++ T  +LPPP  +  E+GE R     P+ + FG E   E+  GSE   +K++
Sbjct:   16 ISESFAQALKNFYLSYAEAITSNGQRMASFEPLHHRFLDFVIEQIRSPFHFEPFHQEITSPFNYYEFGLDYMRPLVKLDRSKVFHLERVDEMVELLAKKHNVILFANHQTEPDPQAISLLLENTHP---KFAEDMIFVAGHRVVMDPMAVPFSKGRNLLCIYSKKYTENPPEEKAKKLQHNQRTMKKMAQLLSEGGKCIYVAPSGGRDRPDEH-GRLDVAPFNPQSIEMFWLMSQQAQHPTHFYPLALATYDLLPPPNSIKKELGEHRYARCTPLCLSFGAEFDMEKFDGSEISDKKLR 310
[Close]
BLAST of NO12G00610 vs. NCBI_GenBank
Match: WP_059360244.1 (glycerol-3-phosphate acyltransferase [Parachlamydia acanthamoebae])

HSP 1 Score: 215.7 bits (548), Expect = 2.800e-52
Identity = 112/299 (37.46%), Postives = 173/299 (57.86%), Query Frame = 0 
Query:   74 LPDQFQQALTDILDGMTEVAENTGLDPEKYQEMLGLLMKEAAENSRSLYQFEPFHKNIRGPVDFTAFGENFFDILCVKEQSGVLGRKNMAKIVDYVRQGHNVVLLANHQTEPDPYILRSAFKRLVPADDPLLDRLVFVAGAKVRTDLFTIPFSKGLNLICIHSKKYIEDDPATKPLKTQENLAAMKALQGLIVEGGHILWVAPSGGRDRTDVHTGKMAVAPFDSRAVDMFRVLSTKSQHPTHFFPLSMLTAQVLPPPAKVAMEVGERRLVARRPVHVYFGDELTPERV-GSEFVARKMK 372
            + + F QAL +      E   + G     ++ +    +    E  RS + FEPFH+ I  P ++  FG ++   L   ++S V   + + ++V+ + + HNV+L ANHQTEPDP  +    +   P      + ++FVAG +V  D   +PFSKG NL+CI+SKKY E+ P  K  K Q N   MK +  L+ EGG  ++VAPSGGRDR D H G++ VAPF+ ++++MF ++S ++QHPTHF+PL++ T  +LPPP  +  E+GE R     P+ + FG E   E+  GSE   +K++
Sbjct:   16 ISESFAQALKNFYLSYAEAITSNGQCMASFEPLHHRFLDFVIEQIRSPFHFEPFHQEITSPFNYYEFGLDYMRPLVKLDRSKVFHLERVDEMVELLAKKHNVILFANHQTEPDPQAISLLLENTHP---KFAEDMIFVAGHRVVMDPMAVPFSKGRNLLCIYSKKYTENPPEEKAKKLQHNQRTMKKMAQLLSEGGKCIYVAPSGGRDRPDEH-GRLDVAPFNPQSIEMFWLMSQQAQHPTHFYPLALATYDLLPPPNSIKKELGEHRYARCTPLCLSFGAEFDMEKFDGSEISDKKLR 310
[Close]
BLAST of NO12G00610 vs. NCBI_GenBank
Match: WP_013924318.1 (glycerol-3-phosphate acyltransferase [Parachlamydia acanthamoebae] >CCB85336.1 glycerol-3-phosphate acyltransferase,chloroplastic [Parachlamydia acanthamoebae UV-7])

HSP 1 Score: 215.3 bits (547), Expect = 3.600e-52
Identity = 112/299 (37.46%), Postives = 173/299 (57.86%), Query Frame = 0 
Query:   74 LPDQFQQALTDILDGMTEVAENTGLDPEKYQEMLGLLMKEAAENSRSLYQFEPFHKNIRGPVDFTAFGENFFDILCVKEQSGVLGRKNMAKIVDYVRQGHNVVLLANHQTEPDPYILRSAFKRLVPADDPLLDRLVFVAGAKVRTDLFTIPFSKGLNLICIHSKKYIEDDPATKPLKTQENLAAMKALQGLIVEGGHILWVAPSGGRDRTDVHTGKMAVAPFDSRAVDMFRVLSTKSQHPTHFFPLSMLTAQVLPPPAKVAMEVGERRLVARRPVHVYFGDELTPERV-GSEFVARKMK 372
            + + F QAL +      E   + G     ++ +    +    E  RS + FEPFH+ I  P ++  FG ++   L   ++S V   + + ++V+ + + HNV+L ANHQTEPDP  +    +   P      + ++FVAG +V  D   +PFSKG NL+CI+SKKY E+ P  K  K Q N   MK +  L+ EGG  ++VAPSGGRDR D H G++ VAPF+ ++++MF ++S ++QHPTHF+PL++ T  +LPPP  +  E+GE R     P+ + FG E   E+  GSE   +K++
Sbjct:   16 ISESFAQALKNFYLSYAEAITSNGQCMASFEPLHHRFLDFVIEQIRSPFYFEPFHQEITSPFNYYEFGLDYMRPLVKLDRSKVFHLERVDEMVELLAKKHNVILFANHQTEPDPQAISLLLENTHP---KFAEDMIFVAGHRVVMDPMAVPFSKGRNLLCIYSKKYTENPPEEKAKKLQHNQRTMKKMAQLLSEGGKCIYVAPSGGRDRPDEH-GRLDVAPFNPQSIEMFWLMSQQAQHPTHFYPLALATYDLLPPPNSIKKELGEHRYARCTPLCLSFGAEFDMEKFDGSEISDKKLR 310
The following BLAST results are available for this feature:
BLAST of NO12G00610 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
WP_052354834.13.000e-5443.35glycerol-3-phosphate acyltransferase [Candidatus P... [more]
KIC71259.13.900e-5443.35Glycerol-3-phosphate acyltransferase, chloroplasti... [more]
WP_039359645.13.900e-5443.35glycerol-3-phosphate acyltransferase [Candidatus P... [more]
WP_044045094.13.900e-5443.35glycerol-3-phosphate acyltransferase [Candidatus P... [more]
CAF24042.13.900e-5443.35putative glycerol-3-phosphate acyltransferase [Can... [more]
WP_075883401.15.100e-5443.35glycerol-3-phosphate acyltransferase [Candidatus P... [more]
WP_042104386.11.200e-5239.44hypothetical protein [Parachlamydiaceae bacterium ... [more]
WP_006340240.12.100e-5237.46glycerol-3-phosphate acyltransferase [Parachlamydi... [more]
WP_059360244.12.800e-5237.46glycerol-3-phosphate acyltransferase [Parachlamydi... [more]
WP_013924318.13.600e-5237.46glycerol-3-phosphate acyltransferase [Parachlamydi... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL128nonsL128Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL124nonsL124Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR070ncniR070Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR011ngnoR011Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR006ngnoR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK009952NSK009952Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO12G00610.1NO12G00610.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|324332gene_9974Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100562g3gene4556Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO12G00610.1NO12G00610.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO12G00610 ID=NO12G00610|Name=NO12G00610|organism=Nannochloropsis oceanica|type=gene|length=3193bp
ACAGGGAGAGAGAGATGAGCAAGTCCTCCTTCATATGTGTCCTGGCTACG
GCTGCGGCCATGCTGGCCGCCACCACCCAGGCGTTTGTCCTCCCAACCAG
gtgagaagcaggggaaaatatttgggggggtggggaggcggaagggtaga
ggtagggaggcggaagggtagaatcggacaacatttttccttcacacagc
atcaccctactccatatatcaaataaaaatgtaactacagCCGGCTATTG
GGGACATCGTCGTTGAAAgtgagtgtcgcaggccttccaattgcctttct
ttctccctcttgttccttcgcatcacgacctccccactcaccctccctcc
ctccctcttccccgccatttcttttttagATGATGGCCGCCGGCACAACC
CAGGCAGGCGAGAAAAAGGCCTTGACTGTGGCGGATGTGAAGACGAGGgt
aagcacctcgtggctaatacttaaagaatcggagaggaaagtaatagctg
tttcatcacatgtcgtctgaccccccccccctccccctctctcccctcct
ccctccctccctccctctccagCTCATAGAAAAGATCACCTCCGACCCGA
ACATGAAGCTGCCCGACCAGTTCCAGCAAGgtacaggggaagggagggaa
ggagggagggaaggagggagggaaggagggagagaaagagggagggactg
atgaaccacaaccgaggagacaagcccaaaataaagaggggaagatgcag
tactatcatgcttactattcccacaactcatgtcacatccaattctcatg
ccttctcgaataaaacagCGTTGACCGACATTTTGGACGGCATGACTGAA
GTGGCAGAAAACACGGgtaagcagcacgcacacgcactgacacccattaa
ggagaggaaaacatggaatcattcccttacccttcccttcctcccgccct
caccttttcagGCCTGGACCCCGAGAAGTACCAAGAAATGCTGGGGTTGC
TCATGAAGGAGGCAGCAGAGAACTCCCGGTCCTTGTATCAGTTCGAGCCG
TTCCACAAAAACATCCGGGgtaaggagggagggagggagggagggaggga
gagagggagggaaggggatggagattgtgatgcggcgtgtacaggcacac
ttattttttcttcttcttgttgttgctgttacttttatttggtagGTCCT
GTGGACTTCACGGCATTTGGAGAAAATTTCTTTGACATCCTTTGCGTCAA
Ggtagggaggtccggagggagggagggaaggaggggatgagcgcatcctg
tgtcttcatgtgcgattgatcctcgagacggatggctgacctcccctccc
tccctccctccctccctcgctccctccctcccttctcctctgcagGAGCA
AAGCGGAGTCTTGGGCCGGAAGAACATGGCCAAAATCGTCGACTACGTCC
GACAAGgtacctccctccctccctccgtccctcctccttctcaattttca
tgcccaactctccctccgtccctccctccccccccctccctccgtccctt
tctcccttccatgcccaacccttcctccctccttccctccctccctccct
ccctgcctccttcagGACACAACGTGGTGCTCCTGGCCAACCATCAGACG
GAGCCCGATCCCTACATCCTCCGGTCGGCCTTCAAGCGCCTGGTGCCGGC
GGATGATCCTCTGCTGGACCGGCTGGTGTTCGTGGCTGGCGCGAAAGTAC
GCACGGATTTGTTCACCATCCCCTTCTCCAAGGGACTGAATTTGATATgt
aggtggatggatggatggagggagggagggagggaagaaaggtccacaaa
cattgtcatacttgactgcacggcctgaccttccgatttccctcccttct
ccctccctccctcccttgccccagGCATCCACTCCAAGAAGTACATCGAG
GACGACCCCGCCACCAAGCCCCTCAAGACACAAGAGAATTTGGCTGCCAT
GAAGgtgcatcctccctccctccctcccacccaccctccctccctcgcaa
attgacttttcgaaagcaagatcactagcacctcgaaaacagtcacatcc
tcaacccccccctttcttcgtccctccccccctccctccccccctccctc
ctccagGCCCTGCAAGGCCTCATCGTCGAAGGCGGACACATTCTCTGGGT
TGCGCCCTCCGGCGGCCGAGACCGGACGGACGTTCACACGGGGAAGATGG
CCGTGGCTCCCTTCGACTCCCGCGCGGTGGATATGTTCCGGGTCTTGAGC
ACCAAGAGCCAGCACCCTACCCACTTCTTTCCCTTGTCCATGCTGACGGC
GCAGgtagggaaagaaggagggtggggggtagggggggaagggagggagg
gggggaaggaaggtacggtattcggaaccatcaaaaccttaggggggggg
cgcactcgactgataatcataattccaagcccctcacccttccctccctt
cctgcctccctccctctctccctccctccctcttcagGTCCTTCCCCCTC
CAGCCAAAGTGGCCATGGAGGTGGGTGAACGTCGGCTGGTGGCGCGCCGA
CCCGTGCATGTGTATTTTGGGGATGAGCTAACCCCTGAACGGGTGGGAAG
TGAATTTGTGGCACGAAAGATGAAGGACGGCACGGCGGAAGGTTTGACGG
AGGAGGAGCTGATGAAGAAGGCGGGGAAGGAGGGTTTTACCTATGTGGCG
GAGGGGGATGTCAAGAGGCATTATGATGTGCTTATGGGCCTGGATCTGGT
GTTGGAGGAAGAGGAGGTGTCTGTGCAGTACCATTAAATCAGGTGGGCCG
CCGTGGGGAGGGAGGGAGGGAGGTGAGAGGCCGTGTAGCATACATGTGAT
GTGGAGGGAAGAGGAATTGTGGTCAAAGACTGGAGATGGATAGCTTCTAT
GTGATGTTCGTCTTGTGCGTGTTATCCGGTACCTGAGAGTATCTCGGACT
GCGACTTAATATATGTTTGTCCCAACGTCCCCGCATTCCGTCCGGAAGGT
TACTAACTCCGAATAAAGAAAGATGGACAGCAGGAAAGAAAGAGGTGACA
TCCAAACAACCGATCCTCAATATACAACACATCTTTTTGTATTCCTTCTG
GTGCCGGGCTTAATTTAATCCAAATCCTACTTGTTGGAGCAGG
back to top

protein sequence of NO12G00610.1

>NO12G00610.1-protein ID=NO12G00610.1-protein|Name=NO12G00610.1|organism=Nannochloropsis oceanica|type=polypeptide|length=425bp
MSKSSFICVLATAAAMLAATTQAFVLPTSRLLGTSSLKMMAAGTTQAGEK
KALTVADVKTRLIEKITSDPNMKLPDQFQQALTDILDGMTEVAENTGLDP
EKYQEMLGLLMKEAAENSRSLYQFEPFHKNIRGPVDFTAFGENFFDILCV
KEQSGVLGRKNMAKIVDYVRQGHNVVLLANHQTEPDPYILRSAFKRLVPA
DDPLLDRLVFVAGAKVRTDLFTIPFSKGLNLICIHSKKYIEDDPATKPLK
TQENLAAMKALQGLIVEGGHILWVAPSGGRDRTDVHTGKMAVAPFDSRAV
DMFRVLSTKSQHPTHFFPLSMLTAQVLPPPAKVAMEVGERRLVARRPVHV
YFGDELTPERVGSEFVARKMKDGTAEGLTEEELMKKAGKEGFTYVAEGDV
KRHYDVLMGLDLVLEEEEVSVQYH*
back to top
Synonyms
Publications